| mature miRNA: CAAGGGTCTCGACCTCAAGAC species: Populus trichocarpa database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|73888350|gb|DT491088.1|DT491088 WS02546.C21.1_M12 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02546_M12 3', mRNA sequence CAAGGGTCTCGACCTCAAGAC EST sequence (targeted fragment marked with yellow): AGAAGTTTTGGCTCGTAAGAGGAAGGCAGTTGCGTTAAAGAGAGAAGGGAAATTGGCGGAGGCTCGAGAGGAACTTCGGCAGGCAAAGCTGTTGGAGAAGAGTCTTGAGGTCGAGACCCTTGAGCCTGTAAGTGGTACCCATGATGGGTCAACATCTGTGTCAAATGCTCCCCCTTTTCAACAAAAGGATCCCAGTGCCCCAAAATTTTCTCCAAAACCACTGTCTGGGCGTGATCGATTTAAGTTGCAACAGGAGTCACTGAGCCACAAACGTCAGGCCCTAAAGCTGCGAAGAGAAGGCCAGGTGGAAGAAGCAGAAGCTGAGTTTGAATTGGCCAAGGCTCTGGAAGCCCAGTTGGATGAAATGTCTTCTAATGATTCTGGAAAGTCTTCTGCCTTGAAAGCAATTGGAATTGAAGATAGCAGTATTATATCACAAAGTTCAGAGAGACCAGGACCTGCAAAAGTTAGTCCTACCAAGAGTGAAAAAAAATAGCCAGGAAAGAAATCAGATGGAAGAACGGATCAAGACAGAGAAGGTAAAGGCAGTAAATCTGAAACGTGCAGGGAAGCAAGCTGAAGCTTTGGATGCTTTCCGACGGGCCAAATTATATGAAAAGAAACTAAATTCCTTGGAATGAATTTGATCATTAAGGATGCTTGAGAATCTTCCAAGTATGTTTTCAGGAACACATTTGGATTAGAGATAAATAAAGTTCCTTTTCCCACGTTGGATCCGTACGAATTTGTATTATAGAAACTAGAGGGACAGTGTACCTACCACATGAATTTGCATACCTTTATGGTAAGAGAGAGAGTTCTCAAATGGTTCTCAAGCAGGTTCTTCTCTGCTGTAATGTCTGATTTATTTATTTTAAAAAACGACAACAGTTTGAGCTAAGAAAAAAAAAAAAAAAAAA | |||||||||