| mature miRNA: CACCAAAGGCCTCTGCCCTTC species: Papaver somniferum database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|189458063|gb|FG613180.1|FG613180 stem_S095_C09.SEQ Opium poppy stem cDNA library Papaver somniferum cDNA, mRNA sequence CACCAAAGGCCTCTGCCCTTC EST sequence (targeted fragment marked with yellow): TCGGTCCATATCCGGTGTGGGCGTTAGAGCATTGAGAGGACCTTTCCCTAGTACGAGAGGACCGGGAAGGACGCACCTTTGGTGTACCAGTTATCGTGCCCACGGTAAACGCTGGGTAGCCAAGTGCGGAGCGGATAACTGCTGAAAGCATCTAAGTAGTAAGCCCACCCCAAGATGAGTGCTCTCCTATGCCGACTTCCCCAAAGCCTCCGGTAGCACAGCCGAGACAGCAACGGGTTCTCTGTCCCTGCGGGGATGGAGCGACAGAAGTTTTGAGAATCCAAGAGAATGTCACGGCGATACGATCCGTTTATCATTACGATAGGTGTCAAGTGGAAGTGCGGTGATGTATGCAGCTGAGGCATCCTAACAGACCGATAGACTTGAACCTTGTTCCTACATGACCCGATCAATTCGATCAGGCACTCGCCATCTATTTTCATTGTTCAACTCTTTGACAACATGAAAAACCAAAAGCTCTGCCCTCCCTCTCTATCCAAGGGATGGAAGGGCAGAGGCCTTTGGTTTCCCCTCCAGTCAAGAATTGGGGCCTCACAATCACCAGCCAAAACCCTGCCGTACCTCATTTTTTTTGATTTGGTTGACCGTTGGCTAAAATAATCCAAAACCCTGGCCGGGTTCCATGTAAAACCTCGAAAAGAATCTAGAGCCGCCTAGTTCATTGTTGAAGTAGGAGTTAATTCTGATAATGCAGTTTAGAGGTTTGAGTTGCTAATTTGTGCAGTATTAAAGTTTCAAATTGCAGAAAATGCTTTTAGCTTAGTTTCAAGTGTCACATATGTGGTAATGGAATGAATAGTTTGGACCGCATTCTCTGGACTGTGAGTCCAGTAGGACATCTGGAGTTGGTTGAGTCGAACTTTTCTGGTTAGTATTCACTAGCTTTGATGATGTTTTGAAGTTTCCAAAGTTAAAAAGTCAGTGGTTTAAGGAATTTGGTTTATTCATGGAACAGTTGTTTTTCAGAAAGCTCAACTATAGCGAGGAATTAATGGAGATTGTTCGACAAGGGAATTGGGGTTTTAAGATTTTAAGGGGAAAATATTCTG | |||||||||