| mature miRNA: CACCAAAGGCCTCTGCCCTTC species: Vitis vinifera database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|110406862|gb|EC972449.1|EC972449 WIN1013.C21_C12 Muscat Hamburg post-veraison pericarp normalized (WIN10) Vitis vinifera cDNA CACCAAAGGCCTC-TGCCCTTC EST sequence (targeted fragment marked with yellow): GGATTTCGGTGGCGAGTGGAATTGGGGGAAAGAAAGGGAGAGGGGGTAGGCTTTTGAGTGAATATTTTGATGATGACTATGACGATGAGGAGGGCAGCGGCAGTGGGAAGAAGATGAGGAGGGAGGGGCATGAGGTTTTTGGTGGAAAGGCTGGATTGTCTGGGCAATTGGTTTTGGTGGACAAGAAGGCAGAAGCAAGATCCAGAGTAGACAGAGATGCAGATAATCATCAACTTTTACAGTTGGAAGAGAAGGATGTGGTGTCATCTGTGGCTACAGTGCTTTCTGATCTTTGTGGCCCTGGGGAATGGATGCCTATGGAGAAACTCCATGCCGAGCTGGTGGAGCAGTACAGCAGTGTCTGGCATCACAGCCGAGTAAGAAAATATCTCACTTCTGAGGAATGGTCTAGTCCGGAATCCAAAGGGAAACCTTGGTTTGGCTTGCTTATGCTGTTGAGAAAATACCCAGAACACTTTGTCATCAACACTAGATCCAAGGGCCGGATAACCCTGGAGTTTGTGTCTCTTGTGTCTCTGCTTTCATAAAATTGGGAAAACATCAGGGAGTCCCACCCAGCACTTGGAGCAATGCTGTTAAGCCATGTTTAAGTGTGTTGCAGTGAGCAATGGAGGGTGTGAAGGAAGACCTTGGTTCAAGGCATGTACATTATAAGCAAGCATGGATACTAACTATGTATTGTCATTTGTGACTCTCTGTTTATTAGACATGGAGGTATCTTTTCTTTAATTTTTAAATTGTGGTTTTCACATGTTTTCACTAAAAAAAAAAAAAAAAAA | |||||||||
gi|156729524|gb|EV233637.1|EV233637 VV_PEb09c08.b1 Vitis vinifera cv. perlette LibB Vitis vinifera cDNA, mRNA sequence CACCAAAGGCCTCTGCCCTTC EST sequence (targeted fragment marked with yellow): TTTTATTNNNNNCCAGGATGGCATACGGCGGGAAGATGTCCTCACAAACTTCTGGGGAATGGACTTTACAACAGACGAGCTGAGGTCTTTGGTGCGCAAGTGGCAGACATTGATTGAGGCTCATGTGGATGTTAAGACAACAGATAACTACACCCTGAGGATGTTCTGCATTGCATTCACAAAGAAGCGTCAAAACCAGAACAAGAAGACTTCATATGCCCAATCCAGTCAGATCCGTCAGATCCGCCGCAAGATGAGGGAGATTATGACAACCCAAGCCGCATCCTGTGATCTGAAAGAGTTGGTGAGAAAGTTCATCCCTGAGATGATTGGCAGAGAGATTGAGAAGGCAACTTCAAGCATCTATCCTCTACAGAATGTCTTCATTCGAAAAGTCAAGGTCTTGAAAGCTCCCAAATTTGATCTTGGAAAGTTGATGGAGGTTCATGGTGACTACTCTGAAGATGTTGGTGTGAAGATGGAGAGGCCAGCTGAGGAAACAGTAGCAGAAGTTGAGACTGAGGTTGTTGGAGCCTAATTAAATTTTCGGACTGGATTGGCATTTTCAGTTAGAAGTTCAACTAGATGAAGTTTTGCCCTTTTCTTTGTTGAGATTGAGATGCAGACTAGCATGACTTGAAAGAAATTATGGAACATGGTTTTTGCTTTCGANNNANAANNNNANAAAAAAAAAAAAAANCCTTGTCGGCCGCCTCGGCCCAGTCGACTCTAGACTCGAGCAAGCTTATGCATGCGGCCGCAATTCGAGCTCACTTGGCCAATTCGCCCTATAGTGAGTCGAATTACAATTCACTGGCCGTCGTTTTACAACGGTCGTGACTGGAAAAACCCTGGCGTTACCCAACTTAATCGCCTTGCAACCATCCCCCTTTTCCCAGTTGGCGTAATAACAAAAAGGCCCGCACCAATTCCCCTTTCCAAAAGTTTCCCAACCCTAAATGGCAATGGAAATTGAAACGGTTAATTTTTGTTAAAATCCGCGTAAATTTTTTGTAAACCCCCCCTTTTTTAACCAATGGCCAAAATCGGGAAAATCCCTTAAAATCAAAAAAAAACCCGAAATGGGTTAGGGTTTTTTCCTTTTGGAAAAAAATCCCCTTTAAAAGAAGTGGATCTCCACCCAAAGGGGGAAAAACCTCTTTTTAGGGGATAGGCCCAATCGTAACCCTCCC | |||||||||