| mature miRNA: CACGGGATAATCGATTATCC species: Oryza sativa database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|88454839|gb|CI511811.1|CI511811 CI511811 Oryza sativa (japonica cultivar-group) 9 leaf-stage leaf Oryza sativa Japonica Group CACGGGATAATCGATTATCC EST sequence (targeted fragment marked with yellow): GGAAAATGAATATTTTTATATGCGGGCAGCCCAACCGTACAGGATAAACATTTTTCCATACGGTCGGATTAAGTGGACCGCACTGGATAATCGATTATCCCGTACGGTCAATTTATATCTCCCGCACGCAAAAAAAAAAACCCAAAAATAAAAAAAANGCGAACATNGTCGACTGCCCCCATCCGGCCGCCGCTGGAGACGTCGAGCCTGCCCGCCTCCCCCGAGCTCTCCGGCGAAANTCGTGAAAATANTACAAAAACTNCT | |||||||||
gi|86504170|gb|CI146803.1|CI146803 CI146803 Oryza sativa (japonica cultivar-group) mixed shoot (Normalized Library) Oryza sativa CACGGGATAATCGATTATCC EST sequence (targeted fragment marked with yellow): GCCCGTCTATACCCAAATGTCTGAAAAAATCAATATTTTCGCGTACGGACGGCCCAACCGTATGGGATAATGGACCGCACGGGATAATCGATTATCCCGATGCGGTCATATTATATCGCTCGCACGGAAAAAAAACAAAAAAAAAGTGAAAATGGCCGCCGCCCGCTCGCCCGCTCGCCGCCGGCCTTGACGACNNGCACGCAACGACGGGCATCGTCGTCAAGNNGGAGCCGAGCGNNACGATGGTGCACGATGAGGACCACGACCAGGAGGAGATGCGACGACTGCTGCTCGCGGCTGCCGACGCCGTTGGCGAAGATGTTGGCGTGGAGCGTGTATGGCTTGCCGGTGACGTTGCCGAGGAACTCTAGGCCGATCTCGTCGTGAATCTCCCGTGGGAGCGCCGCCTCGCCCGGCCGCCGCTGCCGCCGCCGCCCTCTCCTGCAAGAATTTCCTCACGTACTCCCTCTCCCT | |||||||||
gi|117238001|gb|CT862015.1|CT862015 CT862015 Oryza sativa (indica cultivar-group) cv. Guang Lu Ai 4 Oryza sativa Indica Group cD CACGGGATAATCGATTATCC EST sequence (targeted fragment marked with yellow): CGTACCATATAGAAGGCCGTCGAGAGAGGAAGGGAATAGTCTTGAAAAGCTGCGCCGCTCGCGCGGCCCGCCTGAGGACCTGTGGAACCCGAGGCGACACCTCCGCTGCTCTTCCCCCACTCGAGCGGCGGCGATGCCACCCAAACTGCGGAAGAGGTCGACGGGGGCGGCGGCACGATCCCCCGCCACGAATGGAGAAGAAGGCCATACTGGCTCTAAATCATCGGAAACGAGTCCGGCTGCTAGCGGAAGGTGGACACGAGCTCGAGCGAGGGATCTAGGGTTCGATACTACCGACCACCCTAGAGTGTCGGATTCTGCTGGCGGCGGGGGCAGGACTGACCGCAAAGCGCCGGCAGGAGCGGCTCCGAAGAAGAGAAAGGGCGTATCGGCGTCGACGTCGGCGGGTCCGGTTCCGAGGAAGACAACGGCGGCGGGCAGGAAAAGAAGAAACCCGCCTTGTCCCAGCTTACCGCCGGGGCAATGCACCAAACCTCGACCAACGAGATATCCCCACTCTCAGGGATGAGCCTAGGGATCCCCTCCCCCCTGATGCCGTGGTCAGTTCGCAAGACAAGGCCATGGTGCTACCCGTGGCTCGCTCCGTTGTCAGGGTTTCATCCCTAACGCCCGATGGGGGGATTGATTTTCCCGTGGCACTGGCATCCGTCCTTTGGTTGGGGATGGGGGTAAAAAAGGGCCGCCCCAGATCCTGACCCCCTTCTTTCTGTCGTCTGGTGATTTCCAAGGGGTGAAATTACATGAACCCCAACCCCTCCAGGCTATTTGGTTTCTTCCTGGCCAAAAAAACCACTATTCCCCTGAAGGGAACGGGGTGTGTTGTCCCTTCCATTGGTTCCCCTATAAGATTGTTGCCCCTTTTTTTGAAAGGGTTCTGGGGGGAAAACTTTCCTCAGTGTTGCCGGGTCCCCTTTCTTTTTTGTGCTTCTCGAATTACAACACCCTTATTGGGCCCGGAGATCTTATTTTTGTGCTTTTGTGTCTTTGGGGATTAAAAAAAACCTTGGGTGGTTCTTTAGTGGGGGTTTGGGGGCCGGGGGGAAAAAATATCTCCTCCCTGGGGCGTCGTGGAAATGGCGGCCCCCCCCCTATGTTTATTTTTGAATATAACAACCCACCCCTCCCTTACTTTAATGTGTTTTTTTTCTTGCGTATACCTTTTCTTCTGATCAATTAATTTTTTCCCCCTTCTACTTAGGGGAGGGGTTCGGTGCCCTCCTTTCTCTCTCGGATGGGGAAGGGGGGGGCGGCCCCCCACCGGCCCCGGTCGCGCGCACACTTGTGCTC | |||||||||
gi|29686439|gb|CB682714.1|CB682714 OSJNEf10F06.r OSJNEf Oryza sativa Japonica Group cDNA clone OSJNEf10F06 3', mRNA sequence CACGGGATAATCGATTATCC EST sequence (targeted fragment marked with yellow): TCCCCCGTCAACGGCGGCGGTGGCCCCTCCCCTCCTCCCCGTGAGGGAGCAGTGGCTCGGCGGAAGCAGTGGCTCAGCGAGAGCGACCAGGAGGAGGAGAAGGTGGCGGCGGGAGAGGGCACGGGGGCAGCGTCGGCGGCTCTATTGGCAGGGCGCGACGGCTGCTGGCGGAGGTGACGCGGCAGCTCGGTGAGCGGAGGAGCGGCGGCCGCGGGACGGGCGGCGGACGGCGCGGCGGCCGAGGCATCGTGCGGCTCGGCGAAGGAGCGACAGGAGTGGGACAAGCGGCAGACGCCACGGCTGCCACGGCACCGCGCGGCTTGGCGAAGGAGCGATGAGCGGCGAGCGGCGCACGAGGCGACGGCCGGGCGATGTGGCAGCCGGGCTCGACGGCGACTTTCGATTTTTGTGTTTTTTTTATTTTTGGTTTTTTTATTCCGTGCAGGTGAAATAATTTGACCGCACGGGATAATCTATTAACCCGTGCGGTCCACTTAACCCGACCACACGGGAAAATGATTATCTTGTGCAGTTGGCCGCCCGCACGTGAAAATATTTATTTTTCCAGACGCGTGGGTCCAGACGGGGAAAACCTCCGCACGGAAAAATCAATTTGACCGCACGGAAAAAATAGTTTATGTAGTGGTGATTCTCTCCGCACGGAAAACGGAGCGGTCTATTATCACGTAATTTTTTTTAAAAATGGATCAAAAAAAAAAAAAAGGAAAAAAAACTCGAGGGGGGGCCCGGTACCCAGCTTTTGTC | |||||||||
gi|87026653|gb|CI254759.1|CI254759 CI254759 Oryza sativa (japonica cultivar-group) Panicles mixture of one, two, three weeks aft CACGGGATAATCGATTATCC EST sequence (targeted fragment marked with yellow): GCACAAGATAATCATTTTCCCGTGTGGTCGGGTTAAGTGGACCGCACGGGTTAATAGATTATCCCGTGCGGTCAAATTATTTCACCTGCACGGAATAAAAAAACCAAAAATAAAAAAAACACAAAAATCGAAAGTCGCCGTCGAGCCCGGCTGCCACATCGCCCGGCCGTCGCCTCGTGCGCCGCTCGCCGCTCATCGCTCCTTCGCCAAGCCGCGCGGTGCCGTGGCAGCCGTGGCGTCTGCCGCTTGTCCCACTCCTGTCGCTCCTTCGCCGAGCCGCACGATGCCTCGGCCGCCGCGCCGTCCGCCGCCCGTCCCGCGGCCGCCGCTCCTCCGCTCACCGAGCTGCCGCGTCACCTCCGCCAGCAGCCGTCGCGCCCTGCCAATAGAGCCGCCGACGCTGCCCCCGTGCCCTCTCCCGCCGCCACCTTCTCCTCCTCCTGGTCGCTCTCGCTGAGCCACTGCTTCCGCCGAGCCACTGCTCCCTCACGGGGAGGAGGGGAGGGGCCACCGCCGCCGTTGACGGGGGAGGGGAGGGGAAGGA | |||||||||
gi|29685605|gb|CB681880.1|CB681880 OSJNEf08J23.f OSJNEf Oryza sativa Japonica Group cDNA clone OSJNEf08J23 5', mRNA sequence CACGGGATAATCGATTATCC EST sequence (targeted fragment marked with yellow): GCTGGAGGAGGCGCCTTAGCAGCTCGGTGAGCGGAGGAGCGGCGGCCGCGGGACGGGCGGCGGACGGCGCGGCGGCCGAGGCATCCCCGGCTCGGCGAAGGAGCGACAGGAGTGGGACAAGCGGCAGACGCCACGGCTGCCACGGCACCGCGCGGCTTGGCGAAGGAGCGATGAGCGGCGAGCGGCGCACGAGGCGACGGCCGGGCGATGTGGCAGCCGGGCTCGACGGCGACTTTCGATTTTTGTGTTTTTTTTATTTTCGGTTTTTTTATTCCGTGCAGGAGAAATAATTTGACCGCACGGGATAATCTATTAACCCGTGCGGTCCACTTAACCCGACCACACGGGAAAATGATTATCTTGTGCAGTTGGCCGCCCGCCACAAAATAAACCAACCACAAGGAAACAAT | |||||||||
gi|88977087|gb|CI024824.1|CI024824 CI024824 Oryza sativa (japonica cultivar-group) etiolated shoot Oryza sativa Japonica Group c CACGGGATAATCGATTATCC EST sequence (targeted fragment marked with yellow): TGCAGTCAAATGATTTTTCCGTGCAGTCAAAATGATTTTTCCGTGCGGATGATTTGTCCGTCTACACCCAAGTGTCTGGAAAAATCAATATTTTCGTGTGCGGATGGGCCAACCGTATGGGATACACGGGATAATCGATTATCCTGTGCGGTCAAATTATTCCGCCCGCACGAAACAAAAAAAAAAAAAAGCGGAAATCGCCGGCCCGCACGCAACCGGCCGCCGCAACTCGTCGGATCTGGGCGGGGCCCGCTCGCCGCCGCCTCGCTAGTCGTCACCACGCCACGCTCGCCCGGTCGCCGTCGTCGCCGTCGAGCCCGCCTGCCGCGACGACGAAGGTGAAGGTGGCGTTGTTGGGCCGCTGCGGGGAGTTCGGGCGGCAGATCCAGCGGACGACGGAGGCGGCCTCGCGGACGCGACGGCGCGAGAGGAGG | |||||||||
gi|89170989|gb|CI040266.1|CI040266 CI040266 Oryza sativa (japonica cultivar-group) etiolated shoot Oryza sativa Japonica Group c CACGGGATAATCGATTATCC EST sequence (targeted fragment marked with yellow): TGTACAATCTTCTTCGGTCTCTCGTTACTGCGAAAACCATTTTTCCTTGCGGTCAAAATGATTTTTCTGTGCGGAGGATTTGCCCGTCTATACCCAAATGTCTGAAAAAATCAATATTTTCGCGTACGGACGGCCCAACCGTATGGGATAATGGACCGCACGGGATAATCGATTATCCCGATGCGGTCATATTATACCGCTCGCACGGAAAAAAAACAAAAAAAAAGTGAAAATGGCCGCCGCCCGCTCGCCCGCTCGCCGCCGCCTTGACGACGCACGCAACGACGGCATCGTCGTCAAGGGAGCCGAGCGACGATGTGCACGATGAGGACCACGACCAGGAGGAGATGCGACGACTGCTGCTCGCGGCTGCCGACGCCGTTGGCGAAGATGTTGGCGTGGAGCGTGTATGGCTTGCCGGTGACGTTGCCGAGGAACTCTAGGCCGATCTCGTCGTGAATCTCCCGTGGGAGCGCCGCCT | |||||||||
gi|300215793|gb|HO088419.1|HO088419 S123-T7promoter Subtracted cDNA library from Indica rice variety Suraksha Oryza sativa Indic CACGGGATAATCGATTATCC EST sequence (targeted fragment marked with yellow): AGGCCGATGCGAGCGGGTGGCGATTTTCTTTTTTATTATTATTTTTTGTTTTTTTGGTTCTGTGCGGGTGGCATTATTTGACCATTATCCCGTACGGTCCACTTAACCCGACCACACGGAAAAATGATTATCCCGTGCGGTCGGCCCGTCCGCACGCGAAAATAATGATTTTTCCAGACGAGGAGCTGCAGGCGGGCCAGGTGACCGCACAGGATAATAATTCTAACCGCCCGGAAAAATGGGTATCGTAGTACTGACAAGTCCACCAACATCACAATCGTTCTCAAACACTGCGAAGAATGACCGTGCCGACCTAAGAAAATAATTTTACACAATTGACCACTGTGATCTACATTTAAAAAAAATAATGTAATAAAAAGATGCAATGAGTTTTTTCCCATCTTGATCTTCTCTTTTCGCCATATGCAGGCCACCTTCCACCAATGTTAGCCTAGCGCCCTCCTCTTGCACCGTGATGCCCGAACGCCTCGCTCCTATGATGATAACTACTCACCACTAGGTTTCCACCTCCAATAGCCTCACCTCAAGTAAGAATGGATTAACGAGCCAGCTCGGCTCGTTAAGGCTCGGTTTGTTCGACCTTATTATTTAATGAGCTAGCTTGGCTTGGCTCGTTAAAGTTAACGAGAAAAAAAGCTTAGCTCGACTTGGCTCGCGAAATAGCTCAAGCC | |||||||||
gi|88530055|gb|CI457390.1|CI457390 CI457390 Oryza sativa (japonica cultivar-group) 30 days after pollination pistil Oryza sativa CACGGGATAATCGATTATCC EST sequence (targeted fragment marked with yellow): CTTTTTTGAATCCAACTCTTCTTATTTATTTCTTCTGATTATTATTATCATCACATTCACGGAGAAAGCAGCATCCAAACATGATAGATGCTACTAGCACATATGGATAATTAATTATCCAGTACCCGGATAACTAATTAAATAATTAATTAAGCCAAAGGCCTAATTAATTAATTANTAAGGAAGTTACTCCATGCCACCCCCAAACATGGGGCAGCCCAAAGAAACNAGTGTGCTGCAGGTTGCACCGGCCGTAGTCCGTCAGNGCGCTCGCCATCCCGGCGATCGTCGCGGCGTNGCACCCGGGCGCCGCGTGCTGCGAGATCATCCCGGCGACGCGGTCGCCCTCCTCCGTGACCACGCCACGCACCAGCACGCTCAACGCGTTGCACCGGCACTGCATCGGCACTGCGGGGAGC | |||||||||
gi|66929703|gb|CX116551.1|CX116551 EI105B06 A normalized whole-life-cycle cDNA library of rice Oryza sativa Indica Group cDNA cl CACGGGATAATCGATTATCC EST sequence (targeted fragment marked with yellow): TGTCCGTGTCTGGTCGACTCCGGGTTATCCCGCGTCGGCGGGGCGGTGCGGGGCGGGCGAGCGGTGGCTCGTCGATGGGCGCGACGGCTGCTGTGGAGGCGACGCGGCGGCTCGGTGAGCGGATGAGCGGTGCCGCGGCGCGGGACGGGCGGGGACGGCGTCGTGGCCGCGGCACTGCGCGGCTCGGCGACTGAGCGGCGAGCGGCGCGTGAGGTGACGGCCGTGCGATGTGGCAGACGGCGTGACTGGCGGTGGCGGGCGGGCTCGACGGTGACTTTCGATTAATGTGTATATATTTGGTTCCTTTGTTCCGTGCGGGGGGTATAATTTGACCGCACAGGATAATCCATTATCCCATGCGGTGCACTTAACCCGACCGCACGGGACAATGATTATCCTTGTTGCGAGTTGGGCCCGCCCGGCAACTGTGAAAAATTATTTCATATTTTCCAGACGGCATTGGGTCTTAGACCGGGGCAAAACCCTCTTGCAACGGGACAGCATCAATTTTCCACCGGTACCGGACACACACATCGGTCCCCTGTACGGATAGGTGCAACGGAACTGCTGCCCACTCGACACACAGACAGCGCGGGTACATCGAACCCGCGCCACACCCAAGCCCGCCACGACCAACCAAAGGGCGGGCCCGCCACCTCGACGGATCCAAGAGCGCTAAAGTACGGCGGTACGATTGCGCACACAACATAACGCACTGCTCATAACGTGGTGCCCCCTAGCGTCACCAGATAACGTTGGGCCCAGCCCGATCCACCCAACAGGGCCGCTACACACTGCGAAAACCCATGATGTCGATTCACCGA | |||||||||
gi|29633659|gb|CB638668.1|CB638668 OSJNEa07D16.f OSJNEa Oryza sativa Japonica Group cDNA clone OSJNEa07D16 5', mRNA sequence CACGGGATAATCGATTATCC EST sequence (targeted fragment marked with yellow): GCGGCTCCGTCGGCGAGGCGCGGCGGCTGCTGGCGAAGGGGTGTGGCGGCTGCTGGCGGAGGCGACGCAGTGGCTGCGGCGGGCGCGGGACGGGCGGCGGACAGCGCGGCGGCCGCGGCAGCGCGTTGCTCGGCGAAGGAGCGGCAAGCAGCGAGCGGCGCGCGAGGCGACGGCCAGGCGAGGCGGCAGCCTACGCAACTGGCGGCGGTGGGCGGGCTCGCGACGGCAACGGCGATAAGTTTCTCCTCCGCTCGTTGACGAGTTTCTGTAGTAGTTTCACGAGTTTCGCCGTAGAGCTCGGGGGAGGCGGGCAGGCTCAACGGCTCGCAGCGGCGGCCGGATGCGGGCAGTCGACGATGTTCGCGTTTTTTTTATTTTTGGGTTTTTTTTTTGCGTGCGGGAGATATAAATTGACCGTACGGGATAATCGATTATCCAGTGCGGTCCACTTAATCCGACCGTATGGAAA | |||||||||
gi|117246770|gb|CT843651.1|CT843651 CT843651 Oryza sativa (indica cultivar-group) cv. Guang Lu Ai 4 Oryza sativa Indica Group cD CACGGGATAATCGATTATCC EST sequence (targeted fragment marked with yellow): ACATTATCTCTCTTCTTTTTTCCTTTTTATTCTCCCTCAACCACTCCTCTCTCTCTCTACCTTATCTTCTCAACCATTCCCCTAGCTCCTCCTTCCCCTCCCCTCCTCCGTCAACAGCGGCGGCGGCCCCGGCGGTGGCGGCTGCTCCCCCTCCCCTCCTCCCCGTGAGGGAGTAGCGGCTCGGCGGGAGAAGGCTGCGGCGGCGGCTCCGTCGGCGAGGCGCGGCGGCTGCTGGCGAAGGGGTGTGGCGGCTGCTGGCGGAGGCGACGCAGTGGCTGCGGCGGGCGCGGGACGGGCGGCGGACAGCGCGGCGGCCGCGGCAGCGCGTTGCTCGGCGAAGGAGCGGCAAGCAGCGAGCGGCGCGCGAGGCGACGGCCAGGCGAGGCGGCAGCCTACGCAACTGGCGGCGGTGGGCGGGCTCGCGACGGCAACGGCGATAAGTTTCTCCTCCGCTCGTTGACGAGTTTCTGTAGTAGTTTCACGAGTTTCGCCGTAGAGCTCGGGGGAGGCGGGCAGGCTCAACGGCTCGCAGCGGCGGCCGGATGCGGGCAGTCGACGATGTTCGCGTTTTTTTTATTTTTGGGTTTTTTTTTTGCGTGCGGGAGATATAAATTGACCGTACGGGATAATCGATTATCCAGTGCGGTCCACTTAATCCGACCGTATGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGGGGGGCGTTTTGGCCCCGGGGGGGGG | |||||||||
gi|88212235|gb|CI211875.1|CI211875 CI211875 Oryza sativa (japonica cultivar-group) same as Lib 33(supermix) Oryza sativa Japonic CACGGGATAATCGATTATCC EST sequence (targeted fragment marked with yellow): TTGATTAAACGTCGGATTATCCATTATCTAAATAATATACTCATATACAAATTAAGGTGTGATAACGACAAGAAATTCATACATTTTTGCATGCTTGAAGTTTAGAACGGTCATGAAAATCTTCGTCAATTTTGGATGAAGAATGTATCTCCTTTTTGGTTGACACTACTACAATACCCATTTTTCCATGCGGGTGTTTGGATTATCCCGTGCGGGGGTCCGGCCCGTTTGCAGCCGGTCGTCTGGAAAAATCGCCATTTTTGCGTGCGGGCGGGCTGACCGCACGGGATAATCGATTATCCCGTGCGGTCATGTTATACCAACCGCACGGAATAATAAAAAAAGGGAAAAGAATCAAAATCCACCCACGAACCCTAATAAAAAATCAACATCGTCAACGTCATCGCCGCCTTCCCGAAGCCTGCCGTCATCGTCGCCGCCTTCCCGAAGCCCGTCGCCGTCGTCCCCGCGGTGGCAGGCCACGGATCCGGCCTCCCCGCGGTGGTCTGCCACGGATACGCTCTGCCACCGCCTTAGCCGATGCAG | |||||||||
gi|88387278|gb|CI580623.1|CI580623 CI580623 Oryza sativa (japonica cultivar-group) shoot Oryza sativa Japonica Group cDNA clone CACGGGATAATCGATTATCC EST sequence (targeted fragment marked with yellow): GGCCCTCCTCCTCCTCCTCCTTTCCCTTGTCTCCTCGCCTTGGCCTTCGCCTTCGCTCCTCTCCTCCCGACCTCCCCCATCGCGTCGACTGCGACGCCACCATGCTCGCTCATCGCGCGTCCTAGTAGCGGCCGACGCACCTCCCTCCCTCCCCCTTCGGCGCGGCATGGCTCGGGTCTCCGGCGCCGGAGCCGCCGGGGAACGCCAGATAGCCGTGGCCTGATTGATTGTTTGATTGATTTGGCTACGTCGACCGTCTCCCTCGCTCTCTCTCTGCACGTGGTTCTACGGTAGTCCCCCCCCTTGACCCTTTCGGTGCGCTGTTGCGATTCTGTGGTGAATTCCATCAAGGGTGGATTTCTCTGGGTACGAATGGATATGGTGGTGCCGGGTAATGATTGTCCTGTGGGCGTGACGGGTG | |||||||||
gi|117236324|gb|CT842254.1|CT842254 CT842254 Oryza sativa (indica cultivar-group) cv. Guang Lu Ai 4 Oryza sativa Indica Group cD CACGGGATAATCGATTATCC EST sequence (targeted fragment marked with yellow): ACCTTATCTCTTCCTTTTATTCTCCTTTCTTAGCCACACACCCAGATTCCCCACACCTCTCCCCACCTTAACTCCTCCCCCCCTTCCCCTTCTGTTGGGCCGGTGATGGCGGCGGCCGGGTGCGGCGGCGACCGGACGAGGCAGCGAGACCTCCTCCTGGTCGTCGTCCTCGTCGTGCACGTCGTCGCTCGGCTCCGTCAATGACAGTGCCGTCGTCGCGTGCGTCGTCAAGGCAGCGAGCGGGCGTCGTCAAGGCAGCGGACGTCGTCGTCGTCTCTGCGGGGAACGTCCCCGCCGCCAGCCACTTCCTCACCGCCATCCACAACCACCCTCTCCACGCCCTCGCCGCTGCCCCTCGCCACGCTGCTCCTGGGCCACCTCCTCTCGCGCCGTCGCGTCCGCGAGGCCGCCTCCGTCGTCCGCTGGATCTGCCGCCCGAACTCCCCGCAGCGGCCCAACAACGCCACCTTCACCTTCGTCGTCGCGGCAGGCGGGCTCGACGGCGACGACGGCGACCGGGCGAGCGTGGCGTGGTGACGACTAGCGAGGCGGCGGCGAGCGGGCCCCGCCCAGATCCGACGAGTTGCGGCGGCCGGTTGCGTGCGGGCCGGCGATTTCCGCTTTTTTTTTTTTTTTTTTGTTTCGTGCGGGCGGAATAATTTGACCGCACAGGATAATCGATTATCCCGTGTATCCCATACGGTTGGCCCATCCGCACACGAAAATATTGATTTTTCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGAAAAAAAAAAAAAAAAGGCCAGCTTGGCCTCGAGGGGGGGCCCGGTACCCCATTCCCCCTATGGTGAGTCGTATT | |||||||||
gi|88550678|gb|CI480674.1|CI480674 CI480674 Oryza sativa (japonica cultivar-group) whole body 3mM SA(salicylic acid) for 1day Or CACGGGATAATCGATTATCC EST sequence (targeted fragment marked with yellow): GGAAAAATCAATATTTTCGTGTGCGGATGGGCCAACCGTATGGGATACACGGGATAATCGATTATCCTGTGGGGTCAAATTATTCCGCCCGCCCGAAACAAAAAAAAAAAAAAAGCGGAAATCGCCGGCCCGAAAGAAACCGGCCGCCGCAACTCGTCGGATCTGGGGGGGGCCCGCTCGCCGCCGACTCGCTAGTCGTCACCACGCCACGCCCCGCCCGGTCGGCGGCGTCCCCGCCCAACCCGCCTGCCGCGAACAGGAAGGTGAAGGTGGCGT | |||||||||
gi|163926695|gb|EG713711.1|EG713711 Os6CPREST0156 6cm rice panicles Oryza sativa Japonica Group cDNA clone 6CPR-A3H05S, mRNA seq CACGGGATAATCGATT-ATCC EST sequence (targeted fragment marked with yellow): GGCCATTACGGCCGGGCGGGATAAATCGATTATCCCGTGCGGTTGGACCGTCCGCACGCGAAAATGCCGATTTTCCCAGACGATTGGCTCCAGGCGGGCCGGACAACCGCTCGGAAAAATCAAAATGCCCGTTTGC | |||||||||
gi|117210890|gb|CT844876.1|CT844876 CT844876 Oryza sativa (indica cultivar-group) cv. Guang Lu Ai 4 Oryza sativa Indica Group cD CACGGGATAATCGATTATCC EST sequence (targeted fragment marked with yellow): CTCCCTTATCTCTTCCCCTTGTGGTTCCCTCCACACCTTCCACTCCTCCCCCTCCCCTCCTCCGCAGGCCAGCACGACGAGCTGGGCGCGGCGAAGGCCAGGCAAGGCAGCTAGTCGGCGTGGCGAGCGGGCGAGGCGGCGGCGAGCTGGGCGCGGCGACAGCCGGGCGAGGCGGCGGCTACTAGCGGAGGCGCGGCGGCCGCTCGCCCTCGCCGCTGCCTCGGGAGGCCCGCCTCGACGATGACAACGACGGCCTTGACGACGACGACCTCGACGGCGGACCTCGGCGAGCTCGTGACAACGATGACGGGCTCGCGGGAGACGGATCCGTCGTCGGTGGGCGCGATAGAAGTGAATCCATCGCCGGCGAGCTCGGGGGAGGTGGGCGGGCTCGTCAGCTCGCGGTGGCGACGGCCGGATGCGGGCAGGTGGCGATTTTCGCTTTTTTTTATTTTTGGTTTTTTTTGTTCCGTGCGGGTGGCATTATTTGACCGCACGGGATAATCCATTTAACCCGACCGCACGGAAAAATGATTATCCCGTGTGGTCGGCCCGTCCGCACGCGAAAATAATGATTTTTCCAGACGAGGAGCTGCAGGCGGGCTGGGCGACCACACAGGATAATCATTCCAACCGCCCGGAAAAATGGGTATTGTAGTAGTGTAATAACTTCTTCACCTGTATTTTTTTTTCTCAATCAATTATAACCTTCTATATATACTATTCAAATTATCCACAAAAAAAAAAAAAAAAAAGAAAGGCCAGCTTGGCCTCGAGGGGGGGGCCCGGTA | |||||||||
gi|112785871|gb|EE591580.1|EE591580 FU_SHRFB-D-D7.seq Rice mixture of leaf, root, panicle Oryza sativa Japonica Group cDNA, mRNA CACGGGATAATCGATTATCC EST sequence (targeted fragment marked with yellow): AGTATTCCCCACACCTCTCCCCATCCTCAAACAGCGCCCCCCCTTCCCCTTCTGTTGGGCCGGTGATGCGTGAGACGGGCGGGTGCGGCGGCGACCGGACGAGGCAGCGAGACCTCCTCCTGGTCGTCGTCCTCGTCGTGCACCTCGTCGCTCGGCTCCGTCAATGACAGTGCCGTCGTCGCGTGCGTCGTCAAGGCAGCGAGCGGGCGTCGTCAAGGCAGCGGACGTCGTCGTCGTCTCTGCGGGGAACGTCCCCGCCGCCAGCCACTTCCTCACCGCCATCCACAACCACCCTCTCCACGCCCTCGCCGCTGCCCCTCGCCACGCTGCTCCTGGGCCACCTCCTCTCGCGCCGTCGCGTCCGCGAGGCCGCCTCCGTCGTCCGCTGGATCTGCCGCCCGAACTCCCCGCAGCGGCCCAACAACGCCACCTTCACCTTCGTCGTCGCGGCAGGCGGGCTCGACGGCGACGACGGCGACCGGGCGAGCGTGGCGTGGTGACGACTAGCGAGGCGGCGGCGAGCGGGCCCCGCCCAGATCCGACGAGTTGCGGCGGCCGGTTGCGTGCGGGCCGGCGATTTCCGCTTTTTTTTTTTTTTTGTTTCGTGCGGGCGGAATAATTTGACCGCACAGGATAATCGATTATCCCGTGTATCCCATACGGTTGCCCCATACGCACACGAAAATATTGATTTTTCCAGAAAAAACATGAGAGAAAAAAG | |||||||||
gi|88240697|gb|CI239859.1|CI239859 CI239859 Oryza sativa (japonica cultivar-group) Shoot and root of germinating seeds Oryza sat CACGGGATAATCGATTATCC EST sequence (targeted fragment marked with yellow): TTTTTTTTTTTTTTGATCTCAATTTACAATGTTCCTCTATTTTCTCGAATGAGGTCATGTGCTATTACATTAGCGTCCACGTAATGAGGAACTTGAAAATTAAAGTTTGTTTTAAACATCACGACACTTTTCTTTGGCCAGTGTTTAGTGAAAACAACCACTACTACATGAACTATTTTTCCGGACGGTCAAATTCATTTTTCCGAGCGGGGATTTTGCCTGTCCGGAGACAGTCGTCTGAAAAAATGAAAATTTTTACGTGCGGTAGCTCAACCGCACAGGATAATCATTTTCCCGTGCGGTCGGGTTGATAATCATTTTCCCGTGCGATCGGGTTAAGTGGACCGCACGGGATAATCAAATAATGCGAACCGCACGGAAAAAAAAAACGAAAAAGTAAAAAAAAACCTAACCCTAGCCGGATTATCCCGTGTCGGTGCCGCTCGTCGTCGTCGTTGCCGCGCCCGATGCCGCGAGAACTACGCCGCCGCTGCCCGAGCTCGCC | |||||||||