miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse




mature miRNA: CAGATAAAGATGAGAGAGAGA
species: Citrus clementina
database: miRNEST
The numbers on the right side of the alignments show a score calculated for them.
When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5.

Predicted miRNA targets
gi|218846041|gb|FC888987.1|FC888987 IC0AAA2BB01RM1 IVIA1 Citrus clementina cDNA clone IC0AAA2BB01, mRNA sequence

CAGATAAAGATGAGAGAGAGA
||||| |||||||. .|||.|
GTCTACTTCTACTTCTTCTTT

EST sequence (targeted fragment marked with yellow):
AAATTTTTTCGCTTCACTTGTTTTTCCAAGTGACTAATATTTGCTTCTTTAATTTCCTTCTAACCGAGCTCTTCTCATATAATATGTGTCCACTACAACAAACAACTTGGTGCTTTAATTTGTTGAATCTTCCATGGCCCTGTCTTGTTTAGGGTTTTGGGTTTTCTTGGTCAAAGAAGAAGAAGAAGAAGAAGGCAGCGAGTCTCTCGTCCGTTTTTGCATTGAGAGTTATCTCTGTGTTATTTGGCTCTTCAAGGATCTGACACAGCAAGATCATATATAGCAAGAATTCACAGCAGGTGTGGATCATGATGAACTTTGTGCAAGAAGAAAAAGGTAATAGCAATAATAATAATGAAGAAGATCAAGATGAAGATCATCAGAAAGAGAGAATTAAGCTCCCTTTTTCCGTTTCTTCTTCATCTTCATCTGTTTCTTCTTCAAAGTACAAAGCTTTTGTCCCGCATCACCACCAAAACTCATGGCTGCTGGGCCCCATTGATTCTCAAGAAGCAGCCACCAATTTTGACAACAGAGAAGACCTCATGGACTTATCACTTGGAAACAACAACAACAATAATGAAGATCAACCACACAAACACAGCGGTAATATAAATAATGCTAATGTTGCTAACGGTACTGGTAGTAGTACCACTGGTGAGAGCAGTGGCATGTATAGGTCCATCGAGAAAGAACACATGTTCGATAAAGTTGTCACACCAAGCGATGTGGGCAAACTAA



gi|63077576|gb|CX308722.1|CX308722 C21003B01Rv AbsLeaSub1 Citrus clementina cDNA clone C21003B01, mRNA sequence

CAGATAAAGATGAGAGAGAGA
||||||||||||||||.|.|
ATCTATTTCTACTCTCTTTTT

EST sequence (targeted fragment marked with yellow):
ATCTCTTGATAGATCAAAAGATAAAAAAGAGAGCTTCAAGAACGATCAATCATAAGTAAAGATTTGGGCATATCTTTTTCTCTTTGCTTTTTTAATTAATTTTTTTCCACAAATCTTATAGAATTACAAGATATGCCTATAATTAACACCAAAAAAGTCAAAATTATCCCCGAGAGAGCACCATAACTACATCAAATCAAAACCCTAAACAGAATCAACGAGGCTGATTTGAGTGTTAAATCGCCATAATTATAACCTCAAACAACAAATAAGCTATCGCCTAAAAAATTTACAGCTAATGAAAAGCTTATAAATAGCATATCACCATGTCAAGATAAACAATAATAATTAAAAAAAAACCAATTTACGAATTAATCGACATAGCACAGCATCATAACAGCTAGATTAATCGGAAAAATAAATATTAGTCCAAAATAAAACCAAAAAGCTAAAGGTAGCAATTATAATCACTTTTAACTACAGAGAGAGATTAGAAGGAGGCCTTTTATCGAAGAAAAATGCTAAGCACAGATAACGATAAGAGAAAAAGAAGAAAAGAGAAAAGAGAGTGGGTGGGTGGAGAGGGAACAAATTTCTCTCGTCTTTCTCTCATATTTTTCTCTCATCTTTATCTATGCCAGCACTCCTCTTATGGAAT



gi|218828144|gb|FC888606.1|FC888606 IC0AAA5CF04RM1 IVIA1 Citrus clementina cDNA clone IC0AAA5CF04, mRNA sequence

CAGATAAAGATGAGAGAGAGA
||.|||||.||.|.|.|||.|
GTTTATTTTTATTTTTTCTTT

EST sequence (targeted fragment marked with yellow):
TAGTAATCACACCCCAAAGGTTCAATCTTCATCGTTTGATCTCCATCATGCCGATCAGAAACATTGCCGTTGGCCATCCCCGTGAGGCGACTCATCCAGATGCCCTAAGGGCAGCCCTAGCAGAGTTCATCTCAACTCTAATATTTGTCTTTGCCGGTGAAGGCTCGGGCATGGCCTTCAACAAGCTCACTCACAACGGCGCCAACACCCCCTCCGGCCTCGTCGCCGCCTCTGTTGCTCACGCTTTCGCCCTTTTCGTTGCTGTCGCCGTTGGCGCCAACATTTCCGGTGGCCACGTTAATCCTGCTGTCACCTTTGGCGCCTTCGTTGGAGGTAACATCTCCCTTCTACGAGGCATCCTCTACTGGATCGCCCAGCTTCTTGGATCCACCGTCGCATGCTTGCTTCTTAAGTTCGTTACCAACGGCCAGACCACATCTGCTTTTGCTCTCTCATCTGGAGTTGGTGCATGGAACGCAGTCGTTTTCGAGATCGTGATGACATTCGGACTAGTGTACACAGTGTATGCCACAGCCCTGGACCCAAAGAAGGGAAGCTTGGGGACAATTGCACCAATTGCAATTGGTTTCATTGTAGGAGCCAACATCTTGGCGGGCGGGGCGTTTGATGGAGCTTCAATGAACCCAGCAGTGTCATTCGGGCCAGCTTTGGTAAGCTGGAGCTGGGACAACCACTGGGTCTACTGGGTCGGGCCACTCATCGGTGGTGGGCTAGCTGGCATCGTCTACGAGTTCTTCTTCATTAACCAGTCTCACGAGCAGCTCCCAACAACCGAGTACTAAGCTAAAAGCTTGCCATCTATGTGAGTTTGCACGGATGTTGTATTTAATTTGCTTTTACCGAGGTTCTTTCTTTTTTATTTTTATTTGTGTTTAATTTATGGCCCGTGATCTGTTTCCATCGTCATGAGCTGCTGGGATATTGTATCGCGATAATTATGGAGTCCCAGGCTATGGCTTTTGATTTCTACTCGCACTTCATTT



gi|218792791|gb|FC888059.1|FC888059 IC0AAA82CF08RM1 IVIA1 Citrus clementina cDNA clone IC0AAA82CF08, mRNA sequence

CAGATAAAGATGAGAGAGAGA
|||||||.||||.|.|.|.|
ATCTATTTTTACTTTTTTTTT

EST sequence (targeted fragment marked with yellow):
CAAAAATCAACAAATAAGAAATAGAAATCCCACCTTTCAAATTCACCAAACAAGCCATTTTTTTTTTTTTCATTTTTATCTAACCTTAACAAAATGCCAAATAAACCCAATAAACAACCAAATTCCCACCTTCCAATTTTGATCAACTAACTGAAAAGCCAAAGCCATCCAAAACACACACAGATAGATTGATCAACAACAACTTCTCACAACTCACCTCTCATTTATTTTCCTCTCAAACTCACCCCATCACCACCATAGCCTCCGCCCAAAAAAAATGACTTCTTTATCCTTCCTCCCCACTCTCCATCACTCCACCTCCGCTCACTTCCTCCCACGCGCCCCCAAATCCCTCAAACCACGCGCCATTTCCATCAAAGCCCAGGCCGTCCCGGCCCTCACCCAAAACGACTTGAAAAAGCTCGCCGCCGACAAGGCCGTTGACTACGTCAAATCCGGCATGGCCCTCGGCCTCGGTACTGGCTCCACCGCCGCCTTCGTCGTCAACAAGATCGGCCAACTCTTGAAAACCGGCGAGTTAAGGGACATCGTCGGAATCCCAACTTCAAAACGCACGGAAGAGCAAGCCAAGTCGCTTAACATTCCCTTAACCACACTTGACGATCACCCATCACTGGATTTGGCCATTGACGGCGCCAATGAGGTTGACCCAGAATTGAACCTCGTTAAAGGCCGAGGCGGGGCGCTTTTGAGAGAGAAGATGGTGGAAGCTGCGTCGAAAAGCTTCGTTGTTGTGGCTGATGAGAGTAAATTAGTGAGCGGACTCGGTGGGAGTAAGCTTGCGATGCCAGTTGAAGTGGTTCAGTTTTGCTGGAAATACAATTTGGTTAGGCTTCAAGACTTGTTCAGGAAACTGGGTTGTGAGGCCAAGCTTAGAGAAAGGGAAAACGGGAACCTTATAT



gi|110841799|gb|DY260840.1|DY260840 KN0AAP13YM04FM1 Fruit-TF Citrus clementina cDNA 5', mRNA sequence

CAGATAAAGATGAGAGAGAGA
|||| |||||.||| |||||
TTCTAATTCTATTCTATCTCT

EST sequence (targeted fragment marked with yellow):
CTCTCTCTCTCTAGCCAGCTTAAGCTTTCTTGGATCCAAAAGGAAAAAAATGGGAGAGGAGAAGAAGCCACAATCAGCTGGTGTATGGCCCACCGTTAAGCCTTTTGTCAATGGTGGTGCCTCTGGTATGCTTGCCACCTGTGTCATTCAGCCCATCGATATGATCAAGGTGAGAATTCAGCTGGGCCAGGGATCCGCCGGTACTGTGACAAAGACTATGCTTAAGAATGAGGGTTTTGGTGCCTTTTACAAGGGGTTGTCTGCTGGACTGCTCAGGCAAGCTACATATACCACTGCTCGTCTTGGATCATTTAGGATCTTGACAAACAAAGCAATTGAAGCCAATGACGGGAAGCCTCTTCCATTGTATCAGAAAGCCTTGTGTGGGCTAACTGCTGGTGCTATTGGAGCTTCCGCTGATAATCCACCACACTTGGCACCTATCCGTATGCGAGTTGATGTCACCCTATCTGCTGCTCTACCGCCGCGATCACCCTCTGCTTCAATGGTTCTTCCCAGTATCGTGCAGATGCAAGGGGATTAATACTCTCACGAACTGCCCTTACAAATCACGCTAATAGATAGTAACAACTCTAATCACATTATGTCTCACGTCTATTCATATGGTGCTTCCTTGTTGTTCTCTTTGTAATTTAATATCTGGTACTATATACATTTCTATATTTCTTATTTTACTAAAGTAGAGGTAATACAATTATTAAAAAATTATAATATTCATAAAAAATAAATAATTATAAAGTAAAATATGGAAAAAATTAAGATAAGATACTTAATGTGTCTTTCTTCCCCCTGCTTTTTCTGGCCCTGCTCTGCACCTCTTACTATTACTCTCCTTCTCTATCTTATCTTAATCTTTATATACGCATTAGAGGACCTTCTTCTCAAGGT



gi|218843550|gb|FC900171.1|FC900171 IC0AAA98DF11RM1 IVIA1 Citrus clementina cDNA clone IC0AAA98DF11, mRNA sequence

CAGATAAAGATGAGAGAGAGA
||||||||||||.||| ||
ATCTATTTCTACTTTCTGTCC

EST sequence (targeted fragment marked with yellow):
ATACAACTCAACCTCGACCATTCTTGAGTAAGCCTCAACCTTAATTGGTTGGGCAATTTTACCTTTTTTTTTTTTGTTTTGAAAGGGCAATTTTTACCTTGTACGCATTGAAGTTAGAGATTTACATGCCTGTCTTTCATCTTTATCTATCTTCGCTAGAAATAAATCTTAAATTCCCAACGCTGCACATCACCAAGGTTCCAAGTTCTAGCACTACAAGAACACTCAACAAATTCTTTAATCCAAATAGGGTTACACCGACCTGGAAAAAGAGTCTAAAATCCTTGCCAACAGTGATGTCGTGAGCCATAAGGAGCAGATAGTTTATTTTAACACGAAATGATGCTGCAGCATTATTAACCATTTCCTCCGATACCTCCAACTCAGGTAATGACTCTAGTTGTCTGCTAAAAAACGAAAAAGTAAGCCTCATTAGGAAGCGCCTATGCGCATCGTAAACACAAAGCCACAAACACATAGCGAGCAGATTATACATACTTATTTCTAAAAGCAGCAAAATTGGCACGAAAGAACATCAAAACGATCAGCAACAGCAAAACATCCGAACAAACAGACAAGAAAGGTAACCCAGACCGCTCAAATATCAGCCATGCAACGGTAGCAACCACAATCACACCAAAAGAAACACGGCGTCGTTTCCATAACAGCACATCAGCAGCTAAGCATAATCAAATAACCAAATTTTAGTCAAACAATTAGTCGCACAATCATCTAAAAACAAAATAAAAAAAAGAACATAATTTTCCATACGAAATATTAAAAAGAATCCATTTTGGTTTATTTTAAAGGGAAAAATCAGATTTTTTTTAACACCGAGAATCTTACTTCTACCGCCGCCCATGAACTGGTGAACT



gi|110845228|gb|DY267971.1|DY267971 IC0AAA22DF08RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence

CAGATAAAGATGAGAGAGAGA
|.|||||.||.|||.|.|||
TTTTATTTTTATTCTTTTTCT

EST sequence (targeted fragment marked with yellow):
TTCGCTTCGGCAAAAGGCCAACATTTAACAATGCCTGACGCTTAGCTTCCGATTTGCCTCTGGCCTCCAGCCTGGCTTCTGATATTTCTTTCCAATTGTTAATTGTTATATACATATATATATATATATAATTAAAAATCATCTATCTTTAAACAAATCAATAATTTAAAAAATTAATAATAACAATCATCATCGGTTTGTCTCTTTTCGCCGATCCTTCCCCCCTTTCTCCCCCTTTATTATCCTTCTGACTCATTCTGATCATTCTTGTTTACAAAATCTTCTTCTTCTTCTTCTTCTTCTCATTCCATTTTTTGTGTCAATTTCCTGAAATCCTCTTTACAGAATAAGGAATTGATCGGTTGGCAAAACTAAGTGGAGCAGGCGATCATATGGCGGAGGAGCACAGATTCCAAGCACAAGAAGGGCACAGGCTCTGCGCAAACAACTGCGGCTTCTTCGGAAGTACGGCGACGATGAATCTCTGTTCGAAATGCTACCGAGATCACTGTCTCAAGGAGCAACAACAAGCGTCGATCAAGACGACGGTTGAGAATTCTCTTTCGGCTTCTCCTCCTTCGTCATCCGCCCCGTTCCTCGGATCTCTCCCCGATCCTCCAGCTTTGGCCCTGCCGGAAGTGAACGGAGATAAGGATGCCGACGTGGCTGTGGTCGTCGAGCAGCAGCAGCAGCAGCCACCGCAGCCGAATCGGTGTTCGGTTTGTAGGAAACGGATCGGGTTGACGGGTTTCAAGTGCAGGTGCGGGACCATCTTCTGTGGGACCCACCGGTACCCGGAGAAGCACGGATGCTCGTTTGATTTCAAGAAGCTTGGCCGAGAGGAGATTGCTCGAGCTAATCCTTTGATCAAAGCCGAGAAGCTCGAGAAGATTTGATTTCCACCGNTCCGATCTCATTTCTTTTANGAAATGAAGACGTCGTGTAATCAACGTCGTCAAGAACGTACATCTGGTCATGCCTGAAGGTCGATGGTTGATAAATATTCTCTCTTTTTCTTTTTCTTATTTTTATTTTTTATAAAGGTAATTTTTGCTTCTTTTTTTTTTTAAATGCATGTAAAAATTTGGGGTTAAAAAAAAATTGGGGAGAAGGTTTCTCCCATTTTCCGTGTAATATTTAAAATCTCCCTTTCCAAAGGAAAAAAAAAATTGGGTTTGGAAAATTTTAATTTTTTCTCTGGGAAAAACCCGGAGTGGGCGCGGCAAACTCAGAAAAACCCACCCTCTACAGAAGGGGCGCCCCCTTTTTCTCAAAAATATTTAATTTTTTTTTTTTTTTTTTTTTTTTTTCCCCCCTCTTGTGGGGTGGGGAATTAATTT



gi|218810531|gb|FC882375.1|FC882375 KN0AAQ12YM17RM1 IVIA1 Citrus clementina cDNA clone KN0AAQ12YM17, mRNA sequence

CAGATAAAGATGAGAGAGAGA
|||||||.||||||.|. ||
TTCTATTTTTACTCTTTTGCT

EST sequence (targeted fragment marked with yellow):
GGCTCTACACATACACAAACACGACACCGAGGGAGAAGAGAAAAAGAGAATCAAAGTTGCTTTCGTGTCCACATCACTTTCGCTCGTTTTCTCATTTTTATCTTCTCTCCTCTCTCCCTCGAGCCTTCGATCTTCGATTCTCTCACCATCATCACTTCAATTCACCTAATAATTATTACAGTCGGTTTTACGCTGCTACAATGCGCCTATGTGCGCTGAATTAAGACTCCGTTAGTTCGAAAAAGTGGCGGCGATGGAGCTCAACAGTAACGACTCCGACACCAAGCCTCAGGGTAGTCGTTCGAAGCCGTTTGAGATCGATCTTAACGAGACGCCACTCCCTTCTCCTCGCGAGACCCCCGTCGCAGGAGCTGCCGTTGATGTCTCTTCAGCTCCGGTGCTGGCCAGGAACTCCGGTGAGGGGAGTCGTATCGGTGGTGGAGGTGTTGGACTTTTGGACATCAATGCCTTGCCGCCGTGTGAAGAAGAAAGTAACGAACTTGTTAGCTCTGGAGTGCATTCTCCATGTGATACTTCTTTTATTTGCAACTCAAATAATGCCCCAGCAACACATTCAAATTTGTTGTATGTGGGGAGTCAACTAGATCATTTGAAGGCTTCTGGCAGTATAGCAGGTTTTGTTAGGTCGGGCTTTGAAGATATAGTGCAACCAAGACTGATATTTGGCAGAAATTTCAGAGAATCAGATCAGAGTCCTGTACATAGAGAAAGGGTTTGGGCTAGTGGTAATTCAATCCCCAGGACATCATATCAGAATTACTACGCTGTGAATGGAAATAGGTTTGATTCAATGTTTGATGTTCCCTG



gi|218837739|gb|FC885026.1|FC885026 IC0AAA69BH02RM1 IVIA1 Citrus clementina cDNA clone IC0AAA69BH02, mRNA sequence

CAGATAAAGATGAGAGAGAGA
|||.|||.||||.|||.|||
ATCTGTTTTTACTTTCTTTCT

EST sequence (targeted fragment marked with yellow):
CGTCGTTGCCAGCCTGGCTTGGTCCACACTCTCTCACTCCGTCCTTCTATTCCTTCTCACCCCTTATCTTTCTTTCATTTTTGTCTAAACAAAAGCCTCACAACCCAGAAAAAAGAGGGAAAAAAAAAAAAAAAAACTCTCACTCTTGCTTGCTCGCACTTCACTATGAGACTAAAATTTGAGTCTCGTTTGTTGATATTTTTTACTATAATTTTCCCCGCAATCTCAGGCGAGCTTCCTCGGTTTAGAGAAGCACCGGCATTTCGAAACGGCAGAGAATGTCCGAAAGCGACATGGTCTGCGCTGGACAGAAGATCTCACAATCCATCAATCATCCACATATCCATGACTCTCGACTCGACGTACCTCCGCGGCTCAGTCGCCGGCGTCTTCTCCGTCCTTCAACACGCCACGTGTCCCGAAAACATCGTCTTCCACTTCATCAGCACGCAGCGGCAGCGACTCGAGCTGAGCCGCACGATCACCGCCACATTCCCTTACCTAAACTTCGAAATCTATCGCTTCGACACCAATCTAGTGAAAGGCAAGATCTCGTACTCGATTCGTCAAGCGTTGGATCAGCCGTTGAATTACGCTAGAATCTACCTGGCCGATCTTTTGCCGTTGACCGTTGGCCGCATTATTTACTTTGACTCGGACCTCATAGTGGTCGATGACGTGGCAAAATTGTGGAGCATCAATTTGAGAGGACGCGTGCTTGGTGCGCCGGAGTACTGTCACGCTAACTTTACCAACTATTTCACGTCAAAGTTCTGGTCGAACCCTGTGTTTTCCGGGACCGTTAAAGGGAGGAGGCCGTGTTATTTTAACACGGGAGTGATGGTGATTGATTTG



gi|63057378|gb|CX288524.1|CX288524 C02001D06SK IF1 Citrus clementina cDNA clone C02001D06, mRNA sequence

CAGATAAAGATGAGAGAGAGA
||.|||||.||.|. .|||||
GTTTATTTTTATTTCTTCTCT

EST sequence (targeted fragment marked with yellow):
CTCTCTCTTCTTTATTTTTATTTGTTTTGTTCTCATCTTTATTTTTATTTTATTTGTTTTGCATGCATGGTCGTAGGTCATTATTTCCTAATCTTGAACCTATAGACTTTGAATTAGAAAAAACACTTCGCACACACAAACAAGTAAAAAATAAAATGGATTTGCAACCACAGGAGAGGCCATTTAAAGATTATTTCAGTCCCTTAGCTAATTTGAGCACGTCATGCATAAGATACCCAAATGTAGCTGCTAGGAGTTTTGAATTAAAACCTAGTGTGTTAAATTGTCTCCCTACATTTTATGGCCTAGAAAATGAGGATCCATATAATCATTTGAATGATTTTCATGCCATTTGTCAAACATTCAAATATGAGAATTTTTCAGATGATGATGTTAAACTTAGACTATTCCCATTTTCTTTAAAGGATAGAGCTCGTTCATGGCTTAATACATTGCCTGCCAATAGCATTTCATCATGGGAACAATTGTAACTAAATTTTTGAATAAATATTTCCCAGTGCATAAAACCAATGCTATTCGCAGGGAAATCTCGGAGTTTACCCAGAGAGAGGACGAGCAATTTTTCGAAACATGGGAGCGATTCAATGGGCTACTCTTGAAGTGTCCACATCATGGGTACGAGAA



gi|218828735|gb|FC888313.1|FC888313 IC0AAA14BA09RM1 IVIA1 Citrus clementina cDNA clone IC0AAA14BA09, mRNA sequence

CAGATAAAGATGAGAGAGAGA
||||| |||| |||||||||
CTCTATCTCTAATCTCTCTCT

EST sequence (targeted fragment marked with yellow):
CAACAACACCAAGTATCCACTCAATGTGGTTGGCACAACGGACAAGAACGGCTACTTCAGGATCAAAGCACCCAAGACAATCACCAGCTACGGAGCTCACAAGTGCAAGCTGTTCCTAGTCACATCACCCTCGGCTTCCTGCGCCAAACCGTCCAATCTCCACGGTGGAGCCACCGGCGCCGTTTTGAGGCCTGAGTCACTCTCCGCAGGCACACCTCCAGTTGCTCTCTACACCGTTGGCCCTTTGGCCTTTGAACCCAAATGCCCACATTAATCTTCTTTTGATTATTTTACCCCCCCCCTCCTCTCTCTCTAATCTCTATCTCTGTCTTTTGCTTCAGTCATATCGTATCATATCCAGTGCTTTGTACCAATCTTGTGTTGTAAACTTGTAATGGGAATGCCAGTCTGTTTGTTTCTATTTGTACTGTGTCCCTTCGTTGACATTAATAAATTATAGTATCCCGCTAGTTTAATTAGCAACAAATAAATTATGAGGCTCATTGTTTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA



gi|110843617|gb|DY264512.1|DY264512 IC0AAA14DA07RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence

CAGATAAAGATGAGAGAGAGA
||.|||||.||.|.|| .|||
GTTTATTTTTATTTTCATTCT

EST sequence (targeted fragment marked with yellow):
AGTATTAATCACACCCCAAAGGTTCAATCTTCATCGTTTGATCTCCATCATGCCGATAAGAAACATTGCCGTTGGCCATCCCCGTGAGGCGACTCATCCAGATGCCCTAAGGGCAGCCCTAGCAGAGTTCATCTCAACTCTAATATTTGTCTTTGCCGGTGAAGGCTCGGGCATGGCCTTCAACAAGCTCACTCACAACGGCGCCAACGCCCCCTCCGGCCTCGTCGCCGCCTCTGTTGCTCACGCTTTCGCCCTTTTCGTTGCTGTCCCCGTTGGCGCCAACATTTCCGGTGGCCACGTTAATCCTGCTGTCGACTTTGGCGCCTTCGTTGGAGGTAACATCTCCCTTCTACGAGGCATCCTCTACTGGATCGCCCAGCTTCTTGGATCCACCGTCGCATGCTTGCTTCTTAGGTTCGATACCAACGGCCAGACCACATCTGCTTTTGCTCTCTCATCTGGAGTTGGTGCATGGAACGCAGTCATTTTCGAGATCGTGATGACATTCGGACTAGTGTACACAGTGTATGCCACAGCCCTGGACCCACAGAATGAAAGCTTGGGGACAATTGCACCAATTGCAATTGGTTTCATTGTATGAGCCAACATCTTGGCGGGCGGGGCGTTTGATGGAGCTTCAATGAACCCAGCAGTGTCATTCGGGCCAGCTTAGGTAAGCTGGAGCTGGGACAACCACTGGGTCTACTGGGTCGTGCCACTCATCGGTGGTGGGCTAGCTGGTATCGTCTACCAGTTCTTCTTCATTAATCAGTCTCACGAGCAGCTCTTAACAACCGAGTACTAAGCTAAGAGCTTGACAACTATGTGAGTTAGCACTGATGTCGTATTAATTTGCTTTTACCGAGATCTTACTTTTATTTTTATTTGGGTTTAGTTATGGCCGTTGATCGGTGTCATCGTCATGAGCTGCTGGATAATGTATCGCGATAATACTGAGCCCGAGCTATGGTTTGTATTTTACTCGAACTTCATTGTTTGAAGTCATTTCATAAACGGGTCT



gi|218792189|gb|FC886570.1|FC886570 IC0AAA28BA09RM1 IVIA1 Citrus clementina cDNA clone IC0AAA28BA09, mRNA sequence

CAGATAAAGATGAGAGAGAGA
|||| |||||||.|||| ||
ATCTACTTCTACTTTCTCACT

EST sequence (targeted fragment marked with yellow):
GAAAATAAAGGAGAAAATCGGACGTCGCAATTGGGGGTTTTAGGGTTTCTGAAAATGTCTCAAACGGGAAAATTGATGCCGAATCTGGACCAGCAGAGCACCAAAATGCTAAATCTAACAGTGCTCCAGCGAATCGATCCTTTCATTGAAGAGATTCTGATAACCGCAGCTCATGTCACCTTCTACGAGTTCAACATCGAGAGCAATCAATGGAGTCGCAAGGACGTTGAAGGATCTCTTTTTGTGGTCAAAAGAAATACTCAGCCGCGTTTTCAGTTTATTGTGATGAATCGGCGTAATACAGAAAATCTGGTGGAGAATCTGCTGGGAGATTTCGAGTATGAAATTCAAGTTCCTTATTTGTTGTATCGGAATGCATCCCAAGAAGTTAATGGAATTTGGTTTTATAATCCCCGTGAATGTGAGGATGTTGCAAATCTCTTCAATAGGATACTTAATGCCTACTCAAAAGTTCCTCCAAAGCCAAAAGTATCATCAAACAAAAGTGAGTTTGAGGAACTTGAAGCAGTTCCAACCCTATCTGTGATGGAAGGCCCTTTGGAGCCAACATCGATTACCACTACTGCCGCTGATGCTCCCGAAGATCCATCATTTGAAAACTATTTTAGTACGGCTACAAGTATTGGAAGTAATGCTCCAAATGCTCCTAGTTTAAGACAGCCCTATCATTCTTCTGCAACCATTCCTTTGTTGCCCCATGCACCTATTGTTATTTCCTCTGCTGCACCAGCTCCACAAGCACCATCCCTCACTCTTTCATCTTCATCTACTCCCATTGCCATCCATGACACTCCTGATCCAATCAGCAACAGCAATCGGGTCACTAACCTTGTGAAGCCTTCATTCTT



gi|110870363|gb|DY290970.1|DY290970 IC0AAA76DE11RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence

CAGATAAAGATGAGAGAGAGA
||.|||||.||.|.|.|.|.|
GTTTATTTTTATTTTTTTTTT

EST sequence (targeted fragment marked with yellow):
AAACAATTATGTCAATGGCTATTGCGACTTCATCGGCATCAGTAGCAATGCGTTCTTGGATGATGATTATTGGCATTGCATTTGCTTTAGGATCAATTGTTCGTCTTGCTGAGGGTCGAGCTTTCTTCGTGTTTGGCGATTCACTCGTCGACAGCGGCAACAACAACTACCTCGCCACGACTGCCCGTGCAGACGCGCCGCCTTATGGGATTGATTTTCCTACTCACCGTCCCACAGGCCGTTTCTCCAATGGCTTCAACATCCCTGACATTATCAGTCAGAGAATTGGGCAATCGGAAGCCCCATTGCCATACTTGAGTCCAGAACTCAATGGACAGAGACTGCTCATTGGTGCCAACTTCGCTTCAGCGGGAATTGGAATTCTCAATGACACCGGCATCCAATTTGTAAACATAATTAGAATGTTCAGACAATTGGATTACTTCGCGGAATACCAGCGTCGAGTGAGTGCTGTCATTGGAGCCCAGCAAGCTCGCCAACTTGTAAACCGAGCACTAGTACTCATCACTGTCGGTGGCAATGATTTTGTGAATAACTATTACTTGGTTCCGTACTCTGCAAGATCTCGCCAATTCACTTTGCCCAATTATGTCAAGTATATCATCTCTGAGTACCGAAAATTATTAATGAGGTTATACGAATTGGGAGCACGTAGGGTTCTTGTGACGGGTACCGGACCACTGGGTTGTGTTCCAGCAGAGCTGGCCCTGAGGGGTTCCAACGGTGGATGCTCAGCTGAACTGCAAAGAGCCACATCCTTGTACAACCCGCAACTCGAACAAATGCTACAAGGAATAAACAGAAAAATTGGTCAAACCGTCTTCATTGCCGCAAATACTCAACAGACGCACATGGATTTCGTAAGCAACCCACAAGCATACGGATTTACAACAGCAAAAGTAGCATGCTGTGGGCAGGGACCGAACAACGGGCTTGGTCTCTGCACAGCACTGTCCGATTTATGCCCTAACCGGCAACTGTAAGCCTTCCGGGGATCCTTTCCTCCCTTCGGAAAAGGCCAACAAATTAATCTTTGAACAATTTTTTGCCGGGTTCTACAACATTATGACCCCTTTAAATCCAACCCCCTTTTGGGGCCTTGGATTCCTTTAACCACCTGAAAGAATCGCACCCTTCTTTTGTTTAAAAAAATTTGAAACCCCCTTTCTTTGGGAAGAGTCTTTTATTTTTTTTTTTTTTTTCACAAAGGGGGTGGGGAAATTATAAAAAAAAAAAATTTTTTGGTAATCTCTCTTCCTTTTTTTTTTTATTTTTATTTGGCCGCGGGGGGGGGGGGGG