miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse




mature miRNA: CATCAGATTCAGCTGCAGCT
species: Populus trichocarpa
database: miRNEST
The numbers on the right side of the alignments show a score calculated for them.
When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5.

Predicted miRNA targets
gi|73879057|gb|DT481795.1|DT481795 WS02532.BR_P12 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02532_P12 5', mRNA sequence

CATCAGATTCAGCTGCAGCT
|||||| ||||||||||.
GTAGTCCAAGTCGACGTTTC

EST sequence (targeted fragment marked with yellow):
CACAACATAATGATTAGCTCATCATGGGGAGCTCCTGCAGCCTTCACTAAAGGCTTCAATCTGCAACATGTGGCAGATGGTCTTTACGGGAGGCATTTGAATGTCTACAGTTGGCCCAATGGTGAACTGAAGCAGACATTGGATCTTGGCGATACAGGACTCTTGCCATTGGAGATAAGGTTTCTGCACGATCCTTCTAAAGATTCAGGGTTTGTTGGGTGTGCCTTAACAAGTAACATGGTTAGGTTTTTCAAGACCCCTGATGGATCATGGGGCCATGAGGTGGCAATATCAGTGAAACCATTGAAGGTGCAAAACTGGATTCTCCCAGAAATGCCAGGGCTTGTAACTGATTTTCTCATCTCTCTTGACGATAGGTTTCTGTACTTTGTCAACTGGCTGCATGGAGATGTCCGACAGTACAGCATTGAGGACCCTGAAAAACCTGTCCTGAAAGGACAAGTTTGGGTTGGGGGGCTGATCCAAAAAGGAAGCTCTGTGGTGGCTGAGGGTGAAGATGGAAAAACCTGGCAGTATGATGTTCCTGAAATCCAGGGACATCGATTGAGGGGCGGGCCTCAAATGATTCAGCTGAGTTTAGACGGGAAGCGACTTTATGTCACCAACTCACTTTTCAGTACCTGGGATCGGCAGTTTTATCCGGAACTTATGGAGAAAGGATCTCACATGTTACAGATAGATGTTGACACTGAGAAGGGTGGTCTTGGCAATAATCAAAACTATTTTGTGGACTTTGCAGCTGAACCTGATGG



gi|73885937|gb|DT488675.1|DT488675 WS02537.B21_B16 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02537_B16 3', mRNA sequence

CATCAGATTCAGCTGCAGCT
|||||.||.|||| .|| ||
GTAGTTTAGGTCGTTGTAGA

EST sequence (targeted fragment marked with yellow):
GGTTTCTTGCCAGAAGCAGCAACCAGCAAAGAGCAAACCAAAGCATTAAAAATGGCTTCTTGTTCTCTAATTACTCCCGCTTCTTCTTTAGCTTCATCTTCTCTACTTAAGTTATTTTCTTCAAGAAACTCCATGGCTACTGTGGGTTTGCTCTCTTTTGCACCAAAAACTTCAAGCTTTATCCTTCACTCTATCAAGCAAAGGGCTTATCATGAAAGTTCATTTAGAGTGAGATCAGTGGCTGCACCAGTAGAAGATGTTGCTGGATTTGATGATATGGTTGCTGGGACACAGCGGAAGTATTACATGCTTGGTGGGAAGGGAGGTGTAGGAAAGACGAGCTGTGCTGCTTCACTTGCTGTGAAATTTGCAAACAGTGGACACCCCACTTTAGTGGTTTCAACTGATCCAGCACACTCCTTGAGTGATTCTTTTGCTCAGGTTGGAACAAGAAAGTACCTTTCTTATTTTGTTTACAAATATCTGCGTTGCATTTTAGTAGAGCTTAACATGAGTGTCGTGTTTTTATTCAGGATTTGACTGGAGGTACACTAGTACCTGTTGATGGACCTGAATACCCACTGTTTGCTCTTGAGGTTTGCCGGATAAACCTTCCTTTGATTTTCTTTAATGGTGGCTCTCTTTTTTCATGTGCACTATAAGATAATCATCATTCCAAAAAAAAAAAAAAAAAA



gi|73870351|gb|DT473089.1|DT473089 WS01228.BR_I17 PT-GT-FL-A-3 Populus trichocarpa cDNA clone WS01228_I17 5', mRNA sequence

CATCAGATTCAGCTGCAGCT
|| ||||||||.| |||||.
GTCGTCTAAGTTGTCGTCGG

EST sequence (targeted fragment marked with yellow):
GCATTCATCCAGAGCTGATCCTGGCTGCTGTTGAATCTGCTGAAATTGCAGAGACTTGAGTGGTAGCAAAGCAATAGACTCAAATATGTCAGATAAATAAAAGGCAGTAGAAATGAGTTCGAGGGGTTTCCCAGTTGATGTGGTCATGGTAGGTTTTAGTTAATAATCTTGGTGTCTGTTCCTTTCGTTTAAGACTCTGTTGGCACTCGGCAGTTGAAATAATTTAGTTCATGCTGCTTTCGGACCTTGTTGGCTGGCCTATCTGTCAATTCTCTCGGCTGAATATAGAGGGTTTGATTTGCATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCCCGGGGGGGGGCCCGGGCCCCCATTTCCCCCTAAGGGGGGCGTATTTACCCGCCCCCCGGGGCCGCCTTTTTAAAAGGGGGGGGGGGGAAAACCCCGGGGTTTCCCCAATTTATCCCCTTGGGACAAACCCCCCTTTTCCCCAGGGGGGGAAAAACAAAAAAGCCCCCCCCCATCCCCCTTTCCCAAAATTTGCCCCCCCGAAAGGGGAAAGGGAACCCCCCCGGAAGCGGCCATTAAAGCGGGGGGGGGGGGGGGTTTCCGCCCAGGGGGCCCCTTAATTTTGCGGGGCCCCTAGCCCCCCTTCTTTTCGTTTTTTTCCTTTTTTTTTCCCC



gi|73882539|gb|DT485277.1|DT485277 WS02527.B21_M09 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02527_M09 3', mRNA sequence

CATCAGATTCAGCTGCAGCT
||.|||||.||. ||||||
GTGGTCTAGGTTTACGTCGT

EST sequence (targeted fragment marked with yellow):
AGAGCTCGCAATGCACTCTTCCGGTTCATTTACTGTTGAAAAGTGCTTTAGTGCCAGTAATTTGTCACTAAGAGAAGCTATAGCATCAGACTTGTTATCCGTGCAAAGTGAGCTTCCCAAGACCAAGCAAGGCCCTTACCTCTTAAGAAAATTAGATATTGATGGATATGCTAACCGGCCTGATCAGTGGAGATCAAGACAGGCTTCGAAACAATCAACTTACAAAGAATTTTATGCTGCATTTGGATCTGGTGAGGTCAAGTCATCAAAAAGTGACTCCTTCCTTGCTGATACTTCCAAGAGCACATCACTCGCAATAGGAGTAAAGAATGTGAGGAAAGAGATTGATCATCATTTGGCCTCATCAGAGAAATATGCAAAGCACGCTGTGGTTGATGATGTCATGAAAGTGAAAAACAAGAAGCACGAGAAGGGTCATGGTGGTGCCTCTGATGAGAAAGCAACAGTGAGTGTAAATCAGAAACCTTTTCTGTCTGTTGACCTGAAGAAGAACAAACGACACGGACAAGAGGAGCGATCAAAAGCTTCAAGAAAGAAGTTAAAAGTTTGATGGTATGAATTCTCTAATTCTGACACTTTTGTAAGGCCTCACTTTTGTTGCGTAGACAATGTAAGGCCTCACTTTTGTTGCGTAGACAATATAGTGTAGCAATTTAGGTGCAAAGATTGTTGAGTACTGGAGTGGAGGTGCAAGTTCTGTTACTTAATAGTATTTTTTATCTTGCTCTTAGCTTCAAATTTTGTTCAGTATTAAGAGTATTTTGTTTTAGACTGGAATGTGTGAATCATAGACCTTTTCAAATAACAGATGAAATTATCATTTAAAAAAAAAAAAAAAAAA



gi|73881559|gb|DT484297.1|DT484297 WS02525.B21_A09 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02525_A09 3', mRNA sequence

CATCAGATTCAGCTGCAGCT
|| ||||||||.| |||||.
GTCGTCTAAGTTGTCGTCGG

EST sequence (targeted fragment marked with yellow):
ATTGAGTATGATGAGCAAGAAGACTATGTAGTAATCAAGCATGCAGCCCTTTTCACCTCCACAATCATGAGCAAACTCCTTGCCCGTCCAAATGTCAAGCTTTTCAATGCTGTGGCTGCAGAGGACTTGATAGTGAAGGAAGGAAGAGTGGGTGGAGTGGTCACTAATTGGGCTCTTGTGTCAATGAACCATGACACACAATCTTGTATGGACCCTAATGTGATGGAGGCCAAGGTGGTTGTGAGTTCTTGTGGCCATGATGGACCATTTGGTGCTACTGGGGTCAAGAGGCTTAAGAGCATTGGCATGATTGATAGTGTGCCAGGAATGAAGGCTCTTGACATGAACGCTGCTGAAGATGCCATTGTGAAGCTTACTAGGGAAGTTGTGCCTGGAATGATTGTTACTGGCATGGAAGTTGCTGAGATTGATGGCTCTCCGAGAATGGGACCAACATTTGGGGCAATGATGATATCAGGGCAGAAGGCAGCTCACCTTGCCTTGAAGTCACTCGGGATGCCCAATGCACTGGATGGAACATTTGTGGGAGGCATTCATCCAGAGCTGATCCTGGCTGCTGTTGAATCTGCTGAAATTGCAGAGACTTGAGTGGGTAGCAAAGCAATAGACTCAAATATGTCAGATAAATAAAAGGCACTAGAAATGAGTTCGAGGGGTTTCCCCTGTTGATGTGGTCATGGTAGGTTTTAGTTAATAATCTTGGTGTCTATTCCTTTCGTTTAAGACTCTGTTGGCACTCGGCAGTTGAAAGAATTTAGTTCATGCTGCTTTCGGACCTTGTTGGCTGGCCAAAAAAAAAAAAAAAAAA



gi|52493346|gb|CV240371.1|CV240371 WS0251.B21_D06 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS0251_D06 3', mRNA sequence

CATCAGATTCAGCTGCAGCT
|| |||||||| |||||| .
GTCGTCTAAGTAGACGTCAG

EST sequence (targeted fragment marked with yellow):
AGGTCAATTCGTTAGAGTTGAACTAGAATCACAAATGAAAGTTGTTACAGTTGATCGGAGCCACATCTCAGATAATGTGGTTGTTTCAACTCCATACCGTGATGCACCTCGATATGGTATGGGAAGTGAAACCCCAATGCATCCTTCTCGGACTCCATTGCGTCCATACATGACACCAATGAGAGATTCAGGAGCGACACCTATTCATGATGGCATGAGGACACCTATGCGTGATCGAGCCTGGAATCCTTATGCACCAATGAGTCCTCCAAGGGATAATTGGGAAGATGGGAACCCTGGCTCTTGGGGAACCAGTCCGCAGTATCAGCCAGGAAGCCCTCCCTCTGGAACATATGAAGCTCCAACTCCTGGTTCAGGCTGGGCTAGCACTCCTGGTGGTAATTATAGTGAAGCTGGAACACCAAGAGATAGCAGTTCTGCATATTGGTTACCGTTCACCGGACTGCAGATGAATCTGCTGTTGGTGTCATCAGAGAGGTGCTTCAGGATGGCTCTTGTAAAATAGTCCTTGGGGCTCATGGCAACGGAGAAACGATAACTGCTCTTCCTAGTGAAATTGAGATGGTGGTGCCAAGGAAATCAGACAAGATCAAGATCCTGGGTGGTGCACATCGTGGTGCTACTGGCAAGTTAATTGGCGTTGATGGCACTGATGGAATTGTAAAGTTGGAGGACACTCTCGATGTTAAGATATTAGATATGGTTATACTGGCAAAACTTGCACAGATGTGATTTTCCTGAGAATACACGAATTAAAATTCAAGAATTATTTCCAAAAAAAAAAAAAAAAAA



gi|73882522|gb|DT485260.1|DT485260 WS02527.B21_L15 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02527_L15 3', mRNA sequence

CATCAGATTCAGCTGCAGCT
|||||| ||||||||||.
GTAGTCCAAGTCGACGTTTC

EST sequence (targeted fragment marked with yellow):
CATTGAGGACCTTGAAAACCCTGTCCGGAAAGGACAAGTTTGGGTTGGGGGGCTGATCCAAAAAGGAAGTTCTGTGGTGGCTGAGGGTGAAGAGGGAAAAACCTGCCAGTATGATGTTCCTGAAATCCAGGGACATCGATTGAGGGGCGGGCCTCAAATGATTCAGTTGAGTTTAGACGGGAAGCGACTTTATGTCACCAACTCTCTTTTCAGTGCCTGGGATTGTCAGTTTTATCCGGAAGTTATGGAGAAAGGATTTCTCATGTTACAGATAGATGTTGACACTGAGAAGGGTGGTCTCGCAATAAATCCAAACTATTTTGTGGACTTTGCAGCTGAACCTGATGGTCCTTCCCTAGCTCACGAGATGAGATATCCAGGTGGAGACTGCACTTCAGATATAGGGATCTAAGCATCTTAAATGGTTCGGCAGTGAGGGGTTACGTGAGAACAGCCATTAGAAGTAAGTAGTTATGTGACTGTAAATGGCAATGGCATGTTGTGGGTTACTGTTGATGGATGAGTAACTATGTCTCTTGTAATGCTTTAATCCATCCTTTTAATAATAATAATAATTGCCGTTTTCGTAAAAAAAAAAAAAACCAAAAAGGACAAAAAAAAAAAAAAAAAA



gi|73889842|gb|DT492580.1|DT492580 WS02551.C21_E20 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02551_E20 3', mRNA sequence

CATCAGATTCAGCTGCAGCT
|| |||||||| |||||| .
GTCGTCTAAGTAGACGTCAG

EST sequence (targeted fragment marked with yellow):
GGGAACACCAAGACATAGCAGTTCTGCATATGCCAATGCTCCAAGCCCGTACCTGCCATCAACTCCTGGTGGCCAGCCTATGACACCCAGTTCAGCGTCCTATCTCCCCGGCACTCCTGGAGGGCAGCTAATGACACCCGGAACTAATGGTCTTGATATGATGTCTCCTGTTATAGGTGGAGATGGTGAAGGACCATGGTTCATACCAGACATATTGGTTACCGTTCACCGGACTGCAGATGAATCTGCTGTTGGTGTCATCAGAGAGGTGCTTCAGGATGGCTCTTGTAAAATAGTCCTTGGGGCTCATGGCAACGGAGAAACGATAACTGCTCTTCCTAGTGAAATTGAGATGGTGGTGCCAAGGAAATCAGACAAGATCAAGATCCTGGGTGGTGCACATCGTGGTGCTACTGGCAAGTTAATTGGCGTTGATGGCACTGATGGAATTGTAAAGTTGGAGGACACTCTCGATGTTAAGATATTAGATATGGTTATACTGGCAAAACTTGCACAGATGTGATTTTCCTGAGAA



gi|73889810|gb|DT492548.1|DT492548 WS02551.C21_C04 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02551_C04 3', mRNA sequence

CATCAGATTCAGCTGCAGCT
|||||| ||||||||||.
GTAGTCCAAGTCGACGTTTC

EST sequence (targeted fragment marked with yellow):
GGTCAACTGGGCTGCATGGAGATGTCCGACAGTACAGCATTGAGGACCCTGAAAAACCTGTCCTGAAAGGACAAGTTTGGGTTGGGGGGCTGATCCAAAAAGGAAGCTCTGTGGTGGCTGAGGGTGAAGATGGAAAAACCTGGCAGTATGATGTTCCTGAAATCCAGGGACATCGATTGAGGGGCGGGCCTCAAATGATTCAGCTGAGTTTAGACGGGAAGCGACTTTATGTCACCAACTCACTTTTCAGTACCTGGGATCGGCAGTTTTATCCGGAACTTATGGAGAAAGGATCTCACATGTTACAGATAGATGTTGACACTGAGAAGGGTGGTCTTGCAATAAATCAAAACTATTTTGTGGACTTTGCAGCTGAACCTGATGGTCCTTCCCTAGCTCACGAGATGAGATATCCAGGTGGTGACTGCACATCAGATATATGGATCTAAGCATCCTAAATGGTTCGGCAGTGAGGGGTTACGTGAGAACATACATTAGAAGTTGTAGTTATGTGACTGTAAATTGCAATGGCATGTTGTGGCAGGTTACTCTTGATGGATGAGCATCTATGTCTCTTCTTTTTATGGAATCCATCCTTTTAATAATAATAATAATAATTCTTAAGGGGTAAAAAAAAAAAAAAAAAA



gi|24066014|gb|BU874490.1|BU874490 Q068F06 Populus flower cDNA library Populus trichocarpa cDNA 5 prime, mRNA sequence

CATCAGATTCAGCTGCAGCT
|||||| ||||||||||.
GTAGTCCAAGTCGACGTTTC

EST sequence (targeted fragment marked with yellow):
AAAAACCTGGCAGTATGATGTTCCTGAAATCCGGGACATCGATTGAGGGGCGGGCCTCAAATGATCCAGCTGAGTTTAGACGGGAAGCGACTTTTTGTCACCAACTCACTTTTCAGTACTTGGGATCGTCAGTTTTATCCGGAACTTATGGAGAAAGGATCTCACATGTTACAGATAGATGTTGACACTGAGAAGGGTGGTCTTGCAATAAATCCAAACTATTTTGTGGACTTTGCAGCTGAACCTGATGGTCCTTCCCTAGCCCACGAGATGAGATATCCAGGTGGTGACTGCACATCAGATATATGGATCTAAACATCCTAAATGGTTCGGCAGTGAGGGGTTACGTGAGAACAGACATTAGAAGTTGTAGTTATGTGACTGTAAACTGCAATGGCATGTTGTGGCAGGTTACTCTTGATGGATGTGCATCTATGTCTCTTCTAATGCTTTAATCCATCCTTTTAATAATAATAATAATTGCCGTTTTCATTAA



gi|73881059|gb|DT483797.1|DT483797 WS02523.B21_J17 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02523_J17 3', mRNA sequence

CATCAGATTCAGCTGCAGCT
|||||| |||||| |||| |
GTAGTCGAAGTCGTCGTCTA

EST sequence (targeted fragment marked with yellow):
TCAGGATAGGTGCAACAGAGGTTATTGCCAGTGTGAAGGCTGAGCTTGGAAGACCAAATGCATTGCAACCTGATAAAGGAAAAGTTGCTATATTTGTTGATTGTAGTCCAGTTGCAGAACCAATGTTCGAGGGCAGAGGGGGCGAGGAACTGTCCACAGAACTCTCAGTTGCTCTTCAGCGTTGTCTCTTGGGTGGTAAAAGTGGAGCAGGGGCTGGAATTGATCTATCATCTTTAATAGTCGCAGAAGGAAAAATTTGTTGGGATCTTTACATTGATGGGCTTGTCATCAGTTCAGATGGAAATCTTCTTGATGCTCTAGGTGCTGCCATCAAGGCTGCCTTAAGCAATACAGGCATCCCAAGAGTCCAAGTTGCAGCCGGTGCATCAGGAGATGAGCAACCAGAGGTTGACATAAGTGATGAAGAATTTATGCAATTTGACACTTCTGGGGTCCCTGTTATAGTTACTCTAACAAAGGTGGGGAGGCACTACATTGTAGACGCCACTTCAGAAGAAGAGTCCCAGATGAGCTCTGCTGTCTCTGTTTCTATCAGTAGGAAAGGGCAAATTTGTGGGCTTTCCAAACGAGGAAGTGCAGGTCTTGATCCGAGTGTTATTTCTGACATGATTTCCGTGGCTCGTCACATAAGTGAGCAGCTAATTAATAAATTGGACTCTGAAATATCTGCTGCTGAAGCTGATGAAGATGAAATGTGACCTCTACACAACCCTGGTATCATTGACTCAAGTAAGCTCTAATAGGACTGTTGATTGAATACTCTGGAATCTCTTAGCTTCACTTTAGAGATAAATGTAATCGAAAAATTGTTGTACACTTATCTGAACATGTCAACGACATTTTTGAAAGCAGCAACGTGATTAACTTGCCAAAAAAAAAAAAAAAAAA



gi|73887615|gb|DT490353.1|DT490353 WS02544.B21_L16 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02544_L16 3', mRNA sequence

CATCAGATTCAGCTGCAGCT
|||||| |||||||.||. |
GTAGTCAAAGTCGATGTTTA

EST sequence (targeted fragment marked with yellow):
CAAAAAAATAATAATCAAGAACCATGAAGGTTCACCCATTACCCAAGAAAAGAAACATTACCATCCAATTCTACCCATTAACATCTTCTGCAGGTGGGTTCCAAAACAAGAAACTTAGGAGGCTACCCCACATATTCAGCCGGATCTTGGAACTCCCCTTCCGGTCAGATGCTGATGTGTCGGTCGAGGAAAATCCCGATTGTTTCCGATTTGTAGCTGAAACTGATGATAACATTGGTGATATGAGGGCCCACACAGTTGAAATCCACCCTGGAGTCATTAAAATTGTGATTAGGCCAAATGGGTATCTTGAATTATCGTCACTTGACGATTTAGAGTTGGATATGTGGAGATTCCGTTTACCGGAAACCACCAGGCCGGAGCTTGCGAGTGCGGTTCTTGCTGACGGAGAGTTGATTGTGACGGTGCCAAAAGGAGAGGGGGAGGGGGGGGAAGGGAATGGTAATAACAACAACGGGGAGTTTAGAGGAGGTATGGGAAATAACAATAATAATGCTAGGCTTGTGCTTGTACAGTGATATGGTAATGATAAAATTTACTGCTCTCTAGCTGTCTTTTTTTTTTTTTAATTTAAATGAATGATGTTGTGGGAGTTAGTTTTTTTTTTCTTTTTTGTCTTGTAAGGTTGGTGATTGGGAACAGGATATGTATGCTCACTCTTGTTATTGATGATCAATGAATCAAGGTTTCTCCTTTTTTTGGCCAAAAAAAAAAAAAAAAAA



gi|3857740|gb|AI166455.1|AI166455 xylem.est.286 Poplar xylem Lambda ZAPII library Populus trichocarpa cDNA 5', mRNA sequence

CATCAGATTCAGCTGCAGCT
|| ||||||||.| |||||.
GTCGTCTAAGTTGTCGTCGG

EST sequence (targeted fragment marked with yellow):
GAAAATGGGACCAACATTTGGGGCAATGATGATATCAGGGCAAAAGGCAGCTCACCTTGCCTTGAATTCACTCGGGATGCCCAATGCACTGGATGGAACATTTGTGGGAGGCATTCATCCAAAGCTGATCCTGGCTGCTGTTGAATCTGCTGAAATTGCAAAAACTTGAGTGGTAGCAAAGCAATAAACTCAAATATGTCAAATAAATAAAAGGCAGTAAAAATGATTTCGAGGGGTTTCCCACTTGATGTGGTCATGGTAGGTTTTAATTAATAATCTTGGTGTCTGTTCCTTTCGTT



gi|52376274|gb|CV226651.1|CV226651 WS0164.B21_O06 PT-DX-A-7 Populus trichocarpa cDNA clone WS0164_O06 3', mRNA sequence

CATCAGATTCAGCTGCAGCT
|| ||||||||.| |||||.
GTCGTCTAAGTTGTCGTCGG

EST sequence (targeted fragment marked with yellow):
ACCTCCACAATCATGAGCAAACTTCTTGCCCGTCCAAATGTTAAGCTTTTCAATGCTGTGGCTGCAGAGGACTTGATAGTGAAAGAAGGAAGAGTGGGTGGAGTGGTCACTAATTGGGCTCTTGTGTCAATGAACCATGACACACAATCTTGTATGGACCCTAATGTGATGGAGGCCAAGGTGGTTGTGAGTTCTTGTGGCCATGATGGACCATTTGGTGCTACTGGGGTCAAGAGGCTTAAGAGCATTGGCATGATTGATAGTGTGCCAGGAATGAAGGCTCTTGACATGAACGCTGCTGAAGATGCCATTGTGAAGCTTACTAGGGAAGTTGTGCCTGGAATGATTGTTACTGGCATGGAAGTTGCTGAGATTGATGGCTTTCCGAGAATGGGACCAACATTTGGGGCAATGATGATATCAGGGCAGAAGGCAGCTCACCTTGCCTTGAAGTCACTCGGGATGCCCAATGCACTGGATGGAACATTTGTGGGAGGCATTCATCCAGAGCTGATCCTGGCTGCTGTTGAATCTGCTGATATTGCAGAGACTTGAGTAGTAGCAAAGCAATAGACTCAAATATGTCAGATAAATAAAAGGCAGTAGAAATGTGTTCGAGGGGTTTCCCAGTTGATGTGGTCATGGTAGGTTTTAGTTAATAATCTTGGTGTCTTTTCCTTTCGTTTAAGACTCTGTTGGCACTCGGCAGCTGGAAGAATTTAGTTCATGCTGCTTTCGGACCTTGTTGGCTGGCCTATCTGTCAATTCTTTCGGCTGAATATAGAGGGTTTGATTTGCAAAAAAAAAAAAAAAAAAAAAAAACAAAAAAAAAAAAAAAAAA



gi|52400805|gb|CV238789.1|CV238789 WS0128.B21.1_B04 PT-GT-FL-A-3 Populus trichocarpa cDNA clone WS0128_B04 3', mRNA sequence

CATCAGATTCAGCTGCAGCT
|||||||||||||.| ||.
ATAGTCTAAGTCGATGCCGG

EST sequence (targeted fragment marked with yellow):
GATGGAGTGGATTCTAGCTAGAATGGTACTTCATCCTGATGTTTATCAAAGGTCCATGATGAGCTTGACAAAGTTGTTGGAAGATCAAGGGCCGTAGCTGAATCTGATATCACGGCAATGGTGTATCTCCAGGCAGCAGTGAAGGAAGTGTTGAGGCTACACCCACCTGGTCCACTTCTCTCGTGGGCCAGGCTTGCCATCACTGATACAACCATAGATGGGTATCACGTGCCTAAAGGGACCACAGCAATGGTTAACATGTGGGCCATTTCAAGGGACCCAGATTCTTGGGAGGACCCGCTTGAATTTATGCCTGAGAGATTCGTGACTAAGAAGGGTGAGCTGGAGTTTTCTGTTCTTGGGTCGGATCTAAGGCTTGCTCCGTTTGGTTCCGGTAGGCGAACCTGCCCGGGAAAGACATTGGGCTTAACTACGGTGACCTTTTGGGTTGCGTCACTACTACACGAGTATGAATGGCTGCCGTGCGATGGAAATAAAGTTGACCTATCAGAAGTACTGGGTCTGTCCTGTGAGATGGCAAATCCATTGACCGTTAAACTGCGGCCCAGGCGTTCCCATTATAAGCCCACTGTACTAGGTGTACAGAACTACGTACTAGATGTCTAGTCTGGATCCAAAAAAAAAAAAAAAA



gi|73883356|gb|DT486094.1|DT486094 WS02530.B21_A07 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02530_A07 3', mRNA sequence

CATCAGATTCAGCTGCAGCT
|||||| ||||||||||.
GTAGTCCAAGTCGACGTTTC

EST sequence (targeted fragment marked with yellow):
GATCCTTTTAAAGATTCAGGGTTTGTTGGGTGTGCCTTAACAAGTAACATGGTTAGGTTTTTCAAGACCCCTGATGGATCATGGAGCCATGAGGTGGCAATATCAGTGAAACCATTGAAGGTGCAAAACTGGATTCTCCCAGAAATGCCAGGGCTTGTAACTGATTTTCTCATCTCTCTTGACGATCGGTTTCTGTACTTTGTCAACTGGCTGCATGGAGATGTCCGACAGTACAGCATTGAGGACCCTGAAAAACCTGTCCTGAAAGGACAAGTTTGGGTTGGGGGGCTGATCCAAAAAGGAAGCTCTGTGGTGGCTGAGGGTGAAGATGGAAAAACCTGGCAGTATGATGTTCCTGAAATCCAGGGACATCGATTGAGGGGCGGGCCTCAAATGATTCAGCTGAGTTTAGACGGGAAGCGACTTTATGTCACCAACTCACTTTTCAGTACCTGGGATCGTCAGTTTTATCCGGAACTTATGGAGAAAGGATCTCACATGTTACAGATAGATGTTGACACTGAGAAGGGTGGTCTTGCAATAAATCCAAACTATTTTGTGGACTTTGCAGCTGAACCTGATGGTCCTTCCCTAGCTCACGAGATGAGATATCCAGGTGGTGACTGCACATCAGATATATGGATCTAAGCATCCTAAATGGTTCGGCAGTGAGGGGTTACGTGAGAACAGACATTAGAAGTTGTAGTTATGTGACTGTAAATTGCAATGGCATGTTGTGGCTTACTGTTGATGGATGAGTAAATATGTCTCTTCTAATGCTTTAATCCATCCTTTTAATAATAATAATAAAAAAAAAAAAAAAAAA



gi|73886945|gb|DT489683.1|DT489683 WS02542.B21_O10 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02542_O10 3', mRNA sequence

CATCAGATTCAGCTGCAGCT
|||||||| || ||. ||||
GTAGTCTACGTGGATCTCGA

EST sequence (targeted fragment marked with yellow):
CATACGTACTCAAACCGTCTAGCCTTGTTTAGAAAGTGCATATATAGCACTACTTGTGCTTCATAGGATCATCAGTACTCGAAAGATTACTTGTTTTAGCGATTTAAGGGACTGTCAGTTTTGCACCATGGAGAAGTCTGACCTGGACCTGATTGGCATTTCAGGATTGCCCACTGAAGAGTTCATCCAACAAAGATGAATGCAGATGATAAAAACATAGAACCTGTGACTGATCAGTGCTTTCAGAGAAGAGTGAAGAATGATTCAGGTGCAGGTGCAAATGCAGGCTCAAGTGTAGACAAGACATTTGCGGCCACCAATGCCCTGTCTGAACTAGTTTGGTCTCCACAGAAAGGTTTGTGTCTTAAATGCGCTGATGGAAGCTTCTCCTACAAAAATCCCTCTCTGTTATGGGGTGCAGGCCCAAGTAATATGGTAAGTGGATCAAGTACTGACAAACCTATCAGTAAAGAATATTTCTGGACAGCTCTAGGTGCATCTGATGTGAACAGTGAAGTTGCTGGAAGAGACAATTCCACTAAATTTGTTACCAGTGATACAAGCATGTTTCCGTCAAGTGAATCTAGACATGAAATCAAAATAGCTGGACCGAACCTGGATGTGGCAAAGAATGATCCGACTTCCGAGGAACCTATTGTCAGAATTAGAGATGTTGGTGACGGGATTCACACATTACAGACAGAAAATGTTTCGGCCTCACAACTTTGCTCAGTGAAAGAATGTGAATCTTATGACATTAAAATGCAAGCACCATCCTCAGGAAGAGAAAATTTTGAATCACCTTCATGCATGGAAAAGGAGAGAGAAAAGATAAGCTAGGCAAAAAAAAAAAAAAAAAA



gi|73874303|gb|DT477041.1|DT477041 WS01231.B21_M02 PT-GT-FL-A-3 Populus trichocarpa cDNA clone WS01231_M02 3', mRNA sequence

CATCAGATTCAGCTGCAGCT
|| ||||||||.| |||||.
GTCGTCTAAGTTGTCGTCGG

EST sequence (targeted fragment marked with yellow):
GCCATGGTTGTACGCAAACCAGCTCATCTCTTCCTTAATGAGCTCGGTATTGAGTATGATGAGCAAGAAGACTATGTAGTAATCAAGCATGCAGCCCTTTTCACCTCCACAATCATGAGCAAACTCCTTGCCCGTCCAAATGTTAAGCTTTTCAATGCTGTGGCTGCAGAGGACTTGATAGTGAAGGAAGGAAGAGTGGGTGGAGTGGTCACTAATTGGGCTCTTGTGTCAATGAACCATGACACACAATCTTGTATGGACCCTAATGTGATGGAGGCCAAGGTGGTTGTGAGTTCTTGTGGCCATGATGGACCATTTGGTGCTACTGGGGTCAAGAGGCTTAAGAGCATTGGCATGATTGATAGTGTGCCAGGAATGAAGGCTCTTGACATGAACGCTGCTGAAGATGCCATTGTGAAGCTTACTAGGGAAGTTGTGCCTGGAATGATTGTTACTGGCATGGAAGTTGCTGAGATTGATGGCTCTCCGAGAATGGGACCAACATTTGGGGCAATGATGATATCAGGGCAGAAGGCAGCTCACCTTGCCTTGAAGTCACTCGGGATGCCCAATGCACTGGATGGAACATTTGTGGGAGGCATTCATCCAGAGCTGATCCTGGCTGCTGTTGAATCTGCTGAAATTGCAGAGACTTGAGTGGTAGCAAAGCAATAGACTCAAATATGTCAGATAAATAAAAGGCAGTAGAAATGAGTTCGAGGGGTTTCCCAGTTGATGTGGTCATGGTAGGTTTTAGTTAATAATCTTGGTGTCTGTTCCTTTCGTTTAAGACTCTGTTGGCACTCAGGCAGTTGAAATAATTTAGTTCATGCTGCTTTCGGACCAAAAAAAAAAAAAAAA