| mature miRNA: CATCGGAATCTGTTACTGTTTC species: Pinus taeda database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|67961659|gb|DR163529.1|DR163529 RTFE1_43_A06.g1_A029 Roots minus iron Pinus taeda cDNA clone RTFE1_43_A06_A029 5', mRNA seque CATCGGAATCTGTTACTGTTTC EST sequence (targeted fragment marked with yellow): TTTTGAGAGTTTGTTATAACCTCAAGAAAGACATAGTATGGATTGAGATTGCTTATCAGGTTGAGAAACAATTCCTGGGAAGATATTTTGAGATGGATATCTTACAGGAATTCCTGATACTGTTGTTGATGATCAAGTTTGTTGGCTGGTTGAAATGGCTATTTCGCATTGCTTCAGCAGGGTTCGAATTAATTGATACAGTAACAGATTCCGTTAATTTGCCTGCTGCACTGGGGATTACATGCAGATGCAATCTGTACGTTTAAACTGCAGGTTTGTTCAGAGTGGGCGTATTTAAGGATTGGCAGGGAAACCCATACATGATGCAGTTATTGATTGTAACCCTGGTTGGCTGATTAGGATGGTTGTGTAGTCTTCCTTTTAGCAATACTTGGATTAATTGAAATGTTAACAGGTTGTTTAATTTTCGTGCAATCTGTCAGTTTTTATTACAAGTTTATTGAGGGGACGACTTCACGTAGAGTTTTGGGCTTCATCCTATTGCAATGCCTTTCTTTAGAGGCGTCTGCACTCCTAACCGAGACCTAAGAATGCAGCGTGATATCCAGTCTATTCTGGAATTCGAGCTAAGTTGATTGGACAAAGCTGTTGATTAGATCTCTCAGGGCTAAAGATTACTGATTCGGAGGAGTCAGAGTCATGGCTTAGGATGCCCTGCAAAACTACATGGTGCACTACATGGTGCAGAGACGAGGATGAATGGATCAGAATATGACAGTGCCTCCTTAATAGTACCCAGGTTCGAAAATGTATTTCTGAAGCTTGTACTAACTTCCTGGTTCAGAGTAAATGAGATGGTTTCTCCGACTCTCTGGTAGGAAGAAGGGGAATCAGAGATGATGTTGTGGACAGTAAAGGAACTGGGTTCGCTGCCATGCGTTTCTACCAGAGCTTTGGTAAATTCTAATGGCCAT | |||||||||