| mature miRNA: CATCTTCATCGTCATCACAAG species: Poncirus trifoliata database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|188235395|gb|EY838837.1|EY838837 PT11-C9-005-009-G07-CT.F Poncirus trifoliata seed, field plant Citrus trifoliata cDNA, mRNA CATCTTCATCGTCATCACAAG EST sequence (targeted fragment marked with yellow): CGCTCACTTCTGTGTTCAGACCGCGAACTTCATATTCTTTCGCTCACAGTACTCGACTCATGGCTCTGCCAAGTCAGCAAACTGTTGATTACCCGAGCTTCAAACTCGTCATCGTCGGCGATGGTGGCACTGGGAAGACTACCTTTGTGAAGAGGCATCTGACTGGGGAGTTTGAGAAGAAGTATGAACCAACTATTGGTGTGGAGGTTCATCCATTGGATTTCTTTACAAATTGTGGCAAAATCCGTTTCTACTGCTGGGACACTGCTGGCCAGGAAAAGTTTGGTGGTCTTAGAGATGGTTATTACATCCATGGGCAATGTGCCATCATTATGTTTGATGTTACTGCCCGATTGACATACAAGAATGTTCCCACTTGGCACCGTGATCTTTGCCGGGTGTGTGAAAATATACCGATTGTTCTCTGTGGGAACAAGGTTGATGTGAAGAATAGGCAAGTCAAGGCAAAGCAGGTTACCTTCCACAGGAAGAAGAATCTACAGTACTATGAGATTTCTGCCAAGAGCAACTACAATTTTGAGAAACCTTTCTTGTACCTTGCCAGGAAGCTTGCTGGGGACCCAAATTTGCACTTCGTGGAATCTCCTGCACTTGCTCCTCCAGAAGTACAGATTGACTTAGCTGCACAGCAACAACATGAAGCCGAGCTTGCCGCAACAGCTAGCCAGCCTCTTCCTGATGACGATGATGATGCATTTGAATAGAGAGGAACTGGCTGGACGGGTGGTAACCCCACCCTCTCATACGGCTGCTTGGATTTAAAATGCTGTTATTT | |||||||||
gi|188397219|gb|EY839571.1|EY839571 PT11-C9-005-016-E08-CT.F Poncirus trifoliata seed, field plant Citrus trifoliata cDNA, mRNA CATCTTCATCGTCATCACAAG EST sequence (targeted fragment marked with yellow): TAAAAGGGGAGGGGTGCTCTGCGGTCGNNNGTCGGATTCCGGGTCGACCCCGCGTCCGAAGATGGTGACAATGAATCAGATGATTCAGATGATGAAATGGTTGATGGAGATGATTCTGATGCGATTTCTGGTGAGGATGATTCTGACGATGACGATGAGGATGATTCAGAAGATGATGAAGACTCAGATGAAGATGAGGAGACACCTAAGAAGCCTGAAGTAGGGAAGAAGAGACCCACTGAATCTGCAACAAAAACTCCTGTTCCTGCAAAGAAGGCAAAAACTCCCATGTCTGATGGTAAGAAGGGAGTTCATGTTGCTACTCCTCATCCGTCAAAGGGTGTAAAAACACCTAATGTGAAGGCACAGACTCCGAAATCTGGGGGACAAGTCACATGTTCATCCTGCAGCAAGACATTTAACTCCGAGAATGCTCTACAGTCTCATACAAAGGCTAAGCATTCTGCAAAATAGAGGGGTTCATGTTATAACATGCTCCGCTGCCGGTTGCTGTGGCATGTTTATTTTTGCGAGCACATATGGAGAGCTATGTGTTAATGTTTATGTTAGGCTTTTGACAGAAAGTGAATGAGCTAGTACTGCAGCGCTTTCTACTATTGTTATGGATGTCTTGCTTTTAGTGAATTTATATTTAAACTTGCTTTCTCTTGAAAAAAAAAAAAAAAAATNATAAACTNATATAANAAAATAAAAAAAACTACAACAAACAATTCATACTCATAAACATAAAACATATAAAATGGGGGGGGGCCCCTCAAAGGGAATCCAGACTTTATTCGGCGGGGGTGGCGCCTTCTTAGCTCTTTTTTTGGGGGCCCCTAAATTTTTTTTCTGGGGCG | |||||||||
gi|188466996|gb|EY839065.1|EY839065 PT11-C9-005-010-E08-CT.F Poncirus trifoliata seed, field plant Citrus trifoliata cDNA, mRNA CATCTTCATCGTCATCACAAG EST sequence (targeted fragment marked with yellow): CCCACGCGTCCGCCCACGCGTCCGAAGAAAGAGAAAGGACATGATTCTGTCCCCCTCTTTGTGAGGTTTGGTGACAAGAAGCTTGTCCTTGGAACACTTATCCCTGATAATATCCCTCAATTATCTTTTGATCTAGTTTTTGAGAAAGAGTTTGAGCTTTCTCACAACTGGAAGAACGGGAGTATCTACTTTTGTGGTTACCAGACCCCTTTGCCTATGGATAGTTCAGATGAATTTGATATGGGGGACTCTGATGAAGAAGAGCAAGAGGAGCTTCCTTCCATTACTGCTGTAGCAGAGAACGGAAAAGCTGGGCAAAAGGCCGAGAAAGCAAAGGCTGCTACTCCCAAGGCTAACCCGGCTGCTAAGCCTGCAAAGCCAATTAAGGATGTGAAACCTGAAGAAGATGGTGACAATGAATCAGATGATTCAGATGATGAAATGGTTGATGGAGATGATTCTGATGCGATTTCTGGTGAGGATGATTCTGACGATGACGATGAGGATGATTCAGAAGATGATGAAGACTCATATGAAGATGAGGAGACACCTAAGAAGCCTGAAGTAGGGAAGAAGAGACCCACTGAATCTGCAACAAAAACTCCTGTTCCTGCAAAGAAGGCAAAAACTCCCATGTCTGATGGTAAGAAGGGAGTTCATGTTGCTACTCCTCATCCGTCAAAGGGTGTAAAAACCCCTAATGTGAAGGCACAGACTCCGAAATCCGGGGGGAACAGTCACATGTTCATCCTGCAGCAAAACATTTAACTCCCAAAAATGGCCTACACGTCCCTAACCAAAAGGCTAGCCTTTCTGCAAAAAAAAAGGGGGTTCATGTTAAAAAACTGGCCCCCCCTGCCGGGTTGGCTGGG | |||||||||
gi|188331720|gb|EY819836.1|EY819836 PT11-C1-901-013-E09-CT.F Poncirus trifoliata leaf, infected with CTV Citrus trifoliata cDNA, CATCTTCATCGTCATCACAAG EST sequence (targeted fragment marked with yellow): TTCCCGACCCACGCGTCCGAAGTTTCTTTTGACAACGAGTTTCGCTTACGAGGGGGCGGAATCCGGTGCGTCACAGCTCGTGTCGGTTACTGCTGATTCGGAAGCGTGGGGCCGCGGGAAGGAACGTCGTAAAGGCTGTGGCTACTCCTGATTCTGCTATTGAGTTACCTTTAACTGCTGAGAATATTGAAAGTGTATTGGATGAAATTCGACCATATCTTATATCAGATGGGGGAAATGTGGCATTACATGAGATTGATGGCAATGTTGTACGATTGAAGCTACAGGGAGCATGTGGCTCTTGTCCCAGTTCTGTTATGACGATGAAGATGGGTATTGAGCGTCGGTTAATGGAGAAGATCCCCGAGATAGTTGCAGTGGAATCGCGTACCAGATGAAGAAACTGGGGCTTGAGCTGAATGAAAAAAATTATAAAAAGGGACCTTGGAGGAAACCCGGCCCTATTCCTGTTGGGCCACCCCAGGGGGTCCACTCTTAACCTTGGGGGCCACTTGGAGGAACCCCTATCTTCCACCGCCGCAATTCTCGACGCGCTCGAACCCAGGGCGAGAAACTAGTGAGATGACGCGACGTCCAACTCCATACTACATGCCCCGACACCGCACGCTCCACTACACTCTCACGTCACCCTAGCCGCTCTCTCCAAGCTCTCGGAAGATGCGCTGTAACGCCGCACTGCATATCGCAGAGCGGGACCAAGCCACAGAGAACGAAGAAGCCGTACAGCGCAGACAAGGCTCCGGCGCAGACAGGATAAAGAGTACAGGCATAGCATATCTAGGAAATGCAACTAAATCATTATCAGCAGACTCCCACAATACCTACCGCCACCGCACAACAGCAACAGTAGAACGTCACCACACAGCCGAACCACCACACCG | |||||||||
gi|188457243|gb|EY840683.1|EY840683 PT11-C9-005-030-F10-CT.F Poncirus trifoliata seed, field plant Citrus trifoliata cDNA, mRNA CATCTTCATCGTCATCACAAG EST sequence (targeted fragment marked with yellow): AGACTATCCGAACACAGATGCGAGGCGTTGTGTTGAACCCTGCTTACAGATCGCCCTCACCAACCCTATGACTCTCCTTCTTGTTCTCGTCCTGCCTCTAACAGTACTAAAAGTTTCTTTGGAGAACGAGTTTCGCTTACGAGGGGGCGGAATCCGGTGCGTCACAGCTCGTGTCGGGTACTGCTGATTCAGAAGCGTGGGGCCGCGGGAAGGAACGTCGTAATGGCTGTGGCTACTCCTGATTCAACTATTGAGTTACCTTTAACTGCTGAGAATATTGAAAGTGTATTGGATGAAATTCGACCATATCTTATATCAGATGGGGGAAGATGTGGCATTACATGAGATTGATGGCAATGTTGTACGATTGAAGCTGCAGGGAGCATGTGGCTCTTGTCCCAGTTCGGTTATGACGATGAAGATGGGTATTGAGCGTCGCTTAATGGAGAAGATCCCCGAGATAGTTGCAGTGGAATCGGTAGCAGATGAAGAAACTGGGCTTGAGCTGAATGAAGAAAATATAGAGAAGGTACTTGAGGAAATCAGGCCCTATCTTTGTGGGGCAGCAGGTGGATCACTTGAACTTGTGGCAATTGATGAGCCGATAGTTAAAAGTTCGAATTACGGGTCCGGCAGCTGGGGGCTTGGACTGTTCGTGTGGCTTGTTACCCAAAAGTTGCGGGAAAAAATCCGAGCCTTTGCCCCCGTTCAATTTCTGGTAGGGTCAAGCAGCAAGGTTCTTGATTATCCGGGGGGGTGGTTACAAAAAGGGGCCGGGGAAAAACCCCCCACCTTTTCGCCCGTTCCCACTTCGGGTAAAGGGGAATTCTTATCAAAGCAAAAAACTTTTTTTACGGGGGGAAAAGTTTTTTTGGGATTCCTTCCGAAGGGGGGATCCCCCCAAAAAAACCTT | |||||||||
gi|57875233|gb|CX640404.1|CX640404 UCRPT02_47B10_b Poncirus trifoliata Roots with Iron Deficiency - UCRPT02-UCR1 Citrus trifolia CATCTTCATCGTCATCACAAG EST sequence (targeted fragment marked with yellow): TTTTTAAATATTAAAAGTATAATGAACCAATAACCATCAAAGTAGTAGGAAAATACAAACTCTTCTTGGTTCCCGTCAGACAATAACAGTTGTCTACACCCTTCCGTACAAGGCAGAGAAACAAGTTACATTGGGTAAAAAATAACCGAAGATTATATACATAATACCCAAAAGGAAAATGACTCCCTGACGGTTCAGCTGCACAGCCTCCATGAATGAACAGTTCTGCCAAATATTTTGTCAGCAGTTACTTTGGCGACAGATGCCATTACATCTATAAGCTTGTAATAATGTTGTTACTTGGTTGGCCAAAATTTGGATTGCCGCGTTGAGCACAAGAATGCTAGTTTTTCTGCAGAGACCACATCTGCAACTTGATTTGTTGGAGTTGAGAGGCATTCGTCAATAGATCCTCCAACAGTTTATGCTGACAATTTTGGTGACGATGATGATGCCAGCGACAATAACGAGGATGATAATCAAGATGACATGAGATACCTGGATAGGTTCACACAGTTAAATCCGGTGTTACCAGTTTACCCTCAGGAACAAGGGCCAACATATTTGTCATTCAGTCTTGTTGGCTAAGCCAGCTCCATAGAGCCTGCATCTATTTGTCCCAGCACAAACTACACACTCATCTGCGCCTC | |||||||||
gi|188298286|gb|EY814773.1|EY814773 PT11-C1-900-055-D05-CT.F Poncirus trifoliata leaf, greenhouse plant Citrus trifoliata cDNA, CATCTTCATCGTCATCACAAG EST sequence (targeted fragment marked with yellow): CCACGCGTCCGCCATCAATTTTTATCAAATCGAATCCCCTGAAAGGAAAAAAAAAAAAAAGTATACACCCGAAGAAATACAAAGAGAAAGATGCAAGGCGTTGTGTTGAACCCAACTTACAGTCGCCCTCACCAAACCCTAGACTCTCCTTCTTGTTCTCGTCCTGCCTCTAAGAGTACTAAAAGTTTCTTTGGAGAACGAGTTTCGCTTACGAGGGGGCGGAATCCGGTGCGTCACAGCTCGTGTCGGTTACTGCTGATTCGGAAGCGTGGGGCCGCGGGAAGGAACGTCGTAAAGGCTGTGGCTACTCCTGATTCAGCTATTGAGTTACCTTTAACTGCTGAGAATATTGAAAGTGTATTGGATGAAATTCGACCATATCTTATATCAGATGGGGGAAATGTGGCATTACATGAGATTGATGGCAATGTTGTACGATTGAAGCTACAGGGAGCATGTGGCTCTTGTCCCAGTTCTGTTATGACGATGAAGATGGGTATTGAGCGTCGCTTAATGGAGAAGATCCCCGAGATAGTTGCAGTGGAATCGGTAGCAGATGAAGAAACTGGGCTTGAGCTGAATGAAGAAAATATAGAGAAGGTACTTGAGGAAATCANGCCCTATCTTGTTGGGGCAGCAGGGGGATCCCTTGAACTTGTGGCCATTGATGACCCCATANTTAAAGGTCCATTTACGGGTCCGGCAGCTGGGGTCAGGATTGTCGTGTGGGTGGTACCCCGAAGGTGGGGGAAAAAATCCAACCGTTTGAGAGGT | |||||||||
gi|188452651|gb|EY831664.1|EY831664 PT11-C2-300-066-G05-CT.F Poncirus trifoliata bark, greenhouse plant Citrus trifoliata cDNA, CATCTTCATCGTCATCACAAG EST sequence (targeted fragment marked with yellow): ATTTTGAGAAACCTTTCTTGTACCTTGCCAGGAAGCTTGCTGGGGACCCAAATTTGCACTTCGTGGAATCTCCTGCACTTGCTCCTCCAGAAGTACAGATTGACTTAGCTGCACAGCAACAACATGAAGCCGAGCTTGCCGCAGCAGCTAGCCAGCCTCTTCCTGATGACGATGATGATGCATTTGAGTAGAGAGGAACTGCTTGGACGGGTGTAAGCGCAACCTCTCATACTGCTGCTTGACTTTAAAATGCTGTTATTTTGGAAATTGTCAACACATGGCGGAGATTTGGTTATGGGCGTAGGGGTGACCATCGAGAACAATGGATTTGTAGTAGTTAGGTTTTACCTTTAGATACTTGTTGGAGACTGTTTTTATGCTTGTTTTTTTGGAGTTTACTTATTACTGGAATGATATGCTTCAGTGACGTGAATTATGCCATTCCAATACTTTTATGCATAAGTTTTGTATGTTCCAACCAGTGGTGCATCAGTTGAATCATGAGTCCTGAGTTGTCGCGTTATGCAGAATGCAATGCCAAATATATTTAGTATCNNNNNNNANANNNNNANNNNNANANNNNNNNNANNNNNAAAAACCCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAANCAANAAAAANAAAAAAAAAAAAAACANAACCANAAANAAAAAAAGGGGGGGGGGGCCTAAAAAGGGACCAAATTAAAAATGGGGGGGGGGGAAAAAATATCTTTTTTAAAGGGCCCACAAATTTTTTTCCGGGGGGGGGGCTTTTTAACCGGGCGGGGGGGGGAAAAACCCGGGGGTACCCCCAATTTAATCCCGCCTGGGACCCCCCCCCCCTTTCCCCCCCGGGGGGGGAAAAAAAAAAAAGA | |||||||||
gi|188433445|gb|EY822945.1|EY822945 PT11-C1-901-049-C11-CT.F Poncirus trifoliata leaf, infected with CTV Citrus trifoliata cDNA, CATCTTCATCGTCATCACAAG EST sequence (targeted fragment marked with yellow): CCACGCGTCCGAAATTAACAAACGCACGCCACCAGATGATCACCGGCCAACACCGACCATGAACCATGTCCTCCAATCCAGTCCAGTGCGGGCTTCGAATTCTTTGATGACGATGATGATGGCGGCCACCCCTTCATCTCCTCCACCGTCTATCAGTTTCCCCCGCCGCACTTTCCTGTTCTTCTCATCCACCACTAGTACCGCACTGTCCCTTCCATCACCACCAGCACCACCACCTGACACCACCATCACTGACCGCATCTTCATGGACTTTTCCCTCTGCCCCACCTTCTTCCGCCCCGAGGGTACTGACCCCACCCTCTGCTCCTCACCTGTCCCCTTGGGCCGCCTCATCATTGGCCTCTACGGCCACCTCGCCCCCATCACCGTCTCCAACTTCAGAGCCATGTGCTCATCTAGATCTCTCTACAGGAACACCCTTGTTCACAAAATCTTTCCCGGTCAGTTCTTTCTTGCCGGCCGTCAAGGCCTCAGCCGCAGAGACTCTAAACTAGGGGAGCTTCATCCTCCCTTGGACTTCTTGCCCCCTAACACTGACAGTCTTCGACCCAATGCTTTCTTGTTGAAGCACTCCACAGGTGGTGTTGTTTCTTTGTGCCTGTCTGAGAATGATGACGACCCCGATGTCAAGCTTGATCCTGATTACAGGAATGTTGAGTTCTTGATCACAACTGGCCCCGGTCCTTGCCCTCAGTTGGATAACAAAACATTGTTTTTGGCACTGTTCTTCAAGGGTTGGATGTGGTGGCTGCCATTGCTTCNATGCCAACATACCAACCATCTGAAAGAATTCAGAAGTACAATGAGCTTGCCGCGTTTATTGGGGAACAAAGAGCAGACACAGCTCGCGCCATTTTGGATTAGGCCTATTAAACCCGCTATATCAGCGACTGCGGTGAGCTCAACCTCAGGCCCACGCCAC | |||||||||
gi|188253273|gb|EY839108.1|EY839108 PT11-C9-005-011-A10-CT.F Poncirus trifoliata seed, field plant Citrus trifoliata cDNA, mRNA CATCTTCATCGTCATCACAAG EST sequence (targeted fragment marked with yellow): CGGATACTGCGGTACGGTCGGATTCCGGGTCGACCCACGCGTCCGCCCACGCGTCCGGATTTCTGGCGAGGATGATTCTGACGATGACGATGAGGATGATTCAGAAGATGATGAAGACTCAGATGAAGATGAGGAGACACCTAAGAAGCCTGAAGTAGGGAAGAAGAGACCCACTGAATCTGCAACAAAAACTCCTGTTCCTGCAAAGAAGGCAAAAACTCCCATGTCTGATGGTAAGAAGGGAGTTCATGTTGCTACTCCTCATCCGTCAAAGGGTGTAAAAACACCTAATGTGAAGGCACAGACTCCGAAATCTGGGGGACAAGTCACATGTTCATCCTGCAGCAAGACATTTAACTCCGAGAATGCTCTACAGTCTCATACAAAGGCTAAGCATTCTGCAAAATAGAGGGGTTCATGTTATAACATGCTCCGCTGCCGGTTGCTGTGGCATGTTTATTTTTGCGAGCACATATGGAGAGCTATGTGTTAATGTTTATGTTAGGCTTTTGACAGAAAGTGAATGAGCTAGTACTGCAGCGCTTTCTACTATTGTTATGGATGTCTTGCTTTTAGTGAATTTATATTTAAACTTGCTTTCTCTTGNNNNNNANNNNNNNNNNNNNNANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNANNNANNNNNNNANNANNNANANNNAANNNANAGGGAAAAAAAAAAAAAAAANAANAAAAAAANAAAAAANAAAAAAAANGGGGGGGCCCCCCGAAAGGAGAAAAAAAATTTAACGCGGGGGGGGGGAGGATAAAACCTCTTTTGGGGGGGCACCCAATTTTATTTCGGGGGGGGCTCTTTTTAAACCCCCGTGGCGGGGGGAAAACCGGGGGGTTTTAACAAAAAAAAACGCCCCCGGAGAGAACCCCCCCCCTCTTTGCGGGGGG | |||||||||
gi|57870310|gb|CX635560.1|CX635560 UCRPT02_12E07_g Poncirus trifoliata Roots with Iron Deficiency - UCRPT02-UCR1 Citrus trifolia CATCTTCATCGTCATCACAAG EST sequence (targeted fragment marked with yellow): CATGAAAGGACATATTGATGTGGACACACCTTTTGGAGCTATGAAGTTACCAATCAGCAAGGAGGGTGGAACTACGCGCCTCAAGAAGAACAAAGAAGATGGTGGTGATGACGATGACGATGATGAGGATTAGAGCAGCTGCTGATGGGGGACAGTAGTGATTCATATGAGTTGCTGTGTTGTTTAATTATTGGAGATTTGTTCATTATAATAATAGATCAATAGACACTCGAGTTCAAAGTATCAACTTCTTATGTTAGCATAAATACTTCCTTTAGAGGAGAAGTTGGTATTGTGTGTTTATGCATATGTATGCTGTTGTTACAGTGATCGGTTTTGCATTGTGTGGCATTTGTTTTTTATCAGCACAGCCACCTACCGGTAGACTTGTCAAAACATTTAGGCCTTATTTGGTTGGATTTGCTTGCTTGTTTCTTGCTTTCTGCCTGCAAAATATTAGTCTAATGACAATGTGTTTGGTGTAA | |||||||||
gi|188379527|gb|EY822521.1|EY822521 PT11-C1-901-043-F06-CT.F Poncirus trifoliata leaf, infected with CTV Citrus trifoliata cDNA, CATCTTCATCGTCATCACAAG EST sequence (targeted fragment marked with yellow): CCACGCGTCCGCTTAAAGTCTTAAATTTCCTCGGAAGGATTAATATTCCCTCAAATTTTAAGCCGATCTATTCTAAATTCAACAATCCCAAAACAGAATGCGTTCCAAAACCCAAATTTTCATCAAATCCCCATCAAATTCTCTGAAAACCCTAAACGTAGGCGCAAACCAATTCGAAACGCTAAACCACCTCAAAAGCTCTCTCCTTTCACCCGATCAGCCTCGCTCGTCTCTTTATTTCACTCTCAATGGAAAAATCCTCGACGAGTCGACCCCGCTTTTCAAAAATCCCCAAATTGCCCCTCTTTCTACCCTGTATTTACGCCAGCGAGTTTTTGGTGGCGGTGGAGATGGCGGCGCCACCGGAGCTGAGTCACGAGATTGTTATCTCAACATGTATGCGGAGAAAAAACCAGATAAAATCGACCCCAATGAGCAAAGGCTCTCGAAATGGTGTAACTGCGCGTTATCGAATGAGCCGCTGAGGGAACCATGCGCTATCGATAAATTAGGTACCATCTTTAATAAAGAAGCGCTTGTTCATGCTTTGTTGACTAAGAGATTGCCAAGCCAGTAAATTAGATAGAGGGGCCGGAAGGCGTTGATCGATGAGAAGATATTCAGGGAGCATGAAACAAGAAAAAAGGGGAGGGAGTGAGGAGGCGGAGGAGGGAAGAGGGAGAGAGGGGGAAGGGCGAAGAAGGGGGGGGGAGGGGAGTTATGAAGGAAAAAGGAAGGGAAGGGAAACCAAAGGTAGAAGAAAGAGTAGAGGGGAGAGGGAGGAAAGAAGTGGGGAGACGAGACACGCATCACAGCACCGCTAAGAAGTAAGCTCAAAGGACCTACAGTACGTTGGGGGGGATGGCAGGGGGGCAGGATATGGTCAATAAAGTTATAAAAAAACAAGTGAGAGATACGGCGAGATCCCCTAT | |||||||||
gi|31671741|gb|CD575839.1|CD575839 UCRPT01_01ah04_g3 Poncirus trifoliata CTV-challenged cDNA library - AGI Citrus trifoliata cDN CATCTTCATCGTCATCACAAG EST sequence (targeted fragment marked with yellow): GAGCCTCGATTCTTTCTTTCTCCTTTTTTGTTTTCCTTTTCTTTTTAAGATCATTGTTAATTTTCAGTTTATAAAAAATTAAAAAAACTAATTATTCAATAATTGACTGTTTACCCTCCAATTTATTTCCCCTTCTTTTGATGCCCTTTGTTCATTTGTTGTTCCTTTAGCCATCGCCTTGCCTCAGATCTGAATCATTACAGAAACAAAATTTCAGTTCAATCACTGCCGTCAGATTTTTTTTGGAATTAATGGATGAATTTCCAAGTCTTTTGGCCCGAGATTTCGGCTTCAAACCGCAAGGCAAGTCGGCTCCAATGGCACCGTCTCGTGCTAACAATTCGAGTTTCGTACTCGGATCTAATGCATCCGAATTCCCAAAATCCTCCTCGCTAAGATCGACGGATGTGTTCGAGGATCACGATCGCGATGGACCCTTTTTCAACGACGTGTTCGTCGGTCCGCCGAAGTATTCTTCCACTTCAGCCGTCAATTCTCGCAGCGGTAACACGTCGTCGTTTGATTACGGCTCTATTTCCGGTTCTTCGAATGCGAATTCGATGCCGGTTTATGATAAGCCGGTTTATGATGACGATGTAGATATTTTCAAAGGATTGCCTGGATTAAGGACCTCATCGACTCCGGCTGCGGCGGCTTCGTCGACGGGCGCGAATTTTGATGACGTG | |||||||||
gi|57879879|gb|CX645050.1|CX645050 UCRPT02_9B01_g Poncirus trifoliata Roots with Iron Deficiency - UCRPT02-UCR1 Citrus trifoliat CATCTTCATCGTCATCACAAG EST sequence (targeted fragment marked with yellow): GTTTCTACTGCTGGGACACTGCTGGCCAGGAAAAGTTTGGTGGTCTTAGAGATGGTTATTACATCCATGGGCAATGTGCCATCATTATGTTTGATGTTACTGCCCGATTGACATACAAGAATGTTCCCACTTGGCACCGTGATCTTTGCCGGGTGTGTGAAAATATACCGATTGTTCTCTGTGGGAACAAGGTTGATGTGAAGAATAGGCAAGTCAAGGCAAAGCAGGTTACCTTCCACAGGAAGAAGAATCTACAGTACTATGAGATTTCTGCCAAGAGCAACTACAATTTTGAGAAACCTTTCTTGTACCTTGCCAGGAAGCTTGCTGGGGACCCAAATTTGCACTTCGTGGAATCTCCTGCACTTGCTCCTCCAGAAGTACAGATTGACTTAGCTGCACAGCAACAACATGAAGCCGAGCTTGCCGCAGCAGCTAGCCAGCCTCTTCCTGATGACGATGATGATGCATTTGAGTAGAGAGGAACTGCTTGGATGGGTGTAAGCGCAACCTCTCATACTGCTGCTTGACTTTAAAATGCTGTTATTTTGGAAATTGTCAACACATGGCGGAGATTTGGTTATGGGCGTAGGGGTGACCATCGAGAACAATGGATTTGTAGTAGTTAGGTTTACCTTTAGATACTTGTTGGAGACTGTTTTTATGCTTGTTTTTTTGGAGTTTACTTATTACTGGAATGATATGCTTCAGTGACGTGAAAAAAAAAAAAAAAAA | |||||||||
gi|188466765|gb|EY812220.1|EY812220 PT11-C1-900-029-A04-CT.F Poncirus trifoliata leaf, greenhouse plant Citrus trifoliata cDNA, CATCTTCATCGTCATCACAAG EST sequence (targeted fragment marked with yellow): CCACGCGTCCGAGCTTCTAGAAGATCTCCAATTTCTCTCAGGTAAATGATAATTTTGTGGAAGATCCACGGAACTGGAACCATGCGATTGCTCGAGAGTTTGATGATTATGATGACGATGAAGATGATGAAGCGGAGGAAGAAGATAGGAGCTTGGACCTGTTAGTTAAATTTGTGGAAAACGTGTTTAAGAAGGTTTCTAGAAAAGCTAGAAAGGCTGTACGCTCCGTTTTGCCTCAATCAATCTCCAAGAATCTGGTGGGATTTTCTGTTAATGGCGTTCTAATTCTGGCGTTTTTGTGGGTGCTGAAGGCATTTCTTGAGGTGGTTTGCACCCTTGGAACTGTAGTCTTTGTCAGTATCTTACTTATACGTGGTGTTTGGACTGGAGTAACTTATTTACAAGAGAGCCGCACTCATAGGGTGGATGACTTGGATGATGAGAATACCGCATGGAGAGGTGCGCAGCCTGCTGCTTGGTATTTTCATTTTTATTAGAGAGAGATTAGAGAGGAGGGGCGGGGGCGGGAATACGAGCACCCTGCAGGGAGGAGAGGGCCCGGAGAGGGAGGACGTGGAGAGAGTTCCCGTTGTGTAGCGGCGGGTGCAGGGGGCGGTTGGACAGGGCTGGCTGCATTGAGAGGAGGCGTGCACGCTGGGAGGGCGGGAGGGTACGGGCGTTGTGTGATCACCGCCACGGGCGCGGCGGCGTGACGGAGNGGAGGGTGCGAGATGGGAGCGGCCACGAGCCGGCGGGCCCCCGGCGCGGGTCCGCGGCGCGGGGATAGGGGGAGGGGGCCGGGGGGGCGAAGAGGTGCGGCGAGAGCACGCAGCAGGGGGCGGCGGCGGGGCGGGGGGGGAGGGAGCAGGGGGGGG | |||||||||
gi|188465292|gb|EY839381.1|EY839381 PT11-C9-005-014-C08-CT.F Poncirus trifoliata seed, field plant Citrus trifoliata cDNA, mRNA CATCTTCATCGTCATCACAAG EST sequence (targeted fragment marked with yellow): CGCTCACTTCTGTGTTCAGACCGCGAACTTCATATTCTTTCGCTCACAGTACTCGACTCATGGCTCTGCCAAGTCAGCAAACTGTTGATTACCCGAGCTTCAAACTCGTCATCGTCGGCGATGGTGGCACTGGGAAGACTACCTTTGTGAAGAGGCATCTGACTGGGGAGTTTGAGAAGAAGTATGAACCAACTATTGGTGTGGAGGTTCATCCATTGGATTTCTTTACAAATTGTGGCAAAATCCGTTTCTACTGCTGGGACACTGCTGGCCAGGAAAAGTTTGGTGGTCTTAGAGATGGTTATTACATCCATGGGCAATGTGCCATCATTATGTTTGATGTTACTGCCCGATTGACATACAAGAATGTTCCCACTTGGCACCGTGATCTTTGCCGGGTGTGTGAAAATATACCGATTGTTCTCTGTGGGAACAAGGTTGATGTGAAGAATAGGCAAGTCAAGGCAAAGCAGGTTACCTTCCACAGGAAGAAGAATCTACAGTACTATGAGATTTCTGCCAAGAGCAACTACAATTTTGAGAAACCTTTCTTGTACCTTGCCAGGAAGCTTGCTGGGGACCCAAATTTGCACTTCGTGGAATCTCCTGCACTTGCTCCTCCAGAAGTACAGATTGACTTAACTGCACAGCAACAACATGAAGCCGAGCTTGCCGCAGCAGCTAGCCAGCCTCTTCCTGATGACGATGATGATGCATTTTGAGTAAAGAAGAACTGCTTGGAAGGGGTGTAAGCGCAACCTCCCATACTGCTGCTTGACTTTTAAATGCTGTTATTTTGGAAATTGTCCAACCCTTGGGGGAAATTTGGTT | |||||||||
gi|188221635|gb|EY832483.1|EY832483 PT11-C2-300-088-G09-CT.F Poncirus trifoliata bark, greenhouse plant Citrus trifoliata cDNA, CATCTTCATCGTCATCACAAG EST sequence (targeted fragment marked with yellow): CCACGCGTCCGCGATCAGCGGCACAGAGTGTGAATGTTTCTGTCAACATGTTGTTCACATTCTTGGTTGCGCAAGTGTTCTTGAACATGCTGTGCCATCTCAAGTTTGGCTTGTTCCTTTTCTTCGCGTTCTTCGTGCTGGTGATGTCATTCTTCGTCTACTTCTTCTTGCCGGAGACCAAGGGAATTCCGATTGAAGAAATGGGTAGCGTGTGGAAGACTCATTGGTTCTGGTCTCGTTATGTCGGTGAAGATGATTTTGTCCCCGGTGGAAACGTGGAAATGCACAAAGGAAGCAATGCTACCAAGAATGTGTGATCAACAACTACTCCGGAATTTATTTTCCGTTTTTCATTTTTCTACTTTGTAACAGTAAATACTATTGGTTTCTAAACGCCAAGGTTCTTGAACTTTGGTTCCTAATTTTATCATCTCAATACAGAAGTGAATTCTATGTAAAACTCTACCGGCAGCTTATTAATGTCAATTACGTAGCACAAATAATTCATGTTANCNNNNNNNNNNNNNNNNANNCNNNNNNNNNNNNNNNAAAAAAAAAAAAAAAAANAAAANAACAAAAAAAAAACAAAAAAAAAACAAAAAAANAAAAAAANAAAAAAAANNAAAAAAAAACAAAAAAAAAAGGGGGGGCCCCCCCAAAAAGAAAAAAATTTAAAAAACGGGGGGGTGGAAAGATAAAATTCTTTTTAAAGGGCCCCCAAAATATCTTTCCCGGGGGCGGGTTTTTAAAAAACGGGGGGGGGGGGAAAAACCGGGGGGGATACCAAAATTAATTCCCCTTTTGGAAAAAACCC | |||||||||