| mature miRNA: CATGCCAAAGGAGATTTGCCC species: Manihot esculenta database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|164394469|gb|DB945966.1|DB945966 DB945966 full-length enriched cassava cDNA library Manihot esculenta cDNA clone CAS01_023_D1 CATGCCAAAGGAGATTTGCCC EST sequence (targeted fragment marked with yellow): GGCGTTGGAGTTTGTTGTGATTTTGGTATGCTGCTACTGGGAGACGAAGAGAACTGATAGCGGCCAAAGGGTTAGTAATCCTCTCTCTTCCTAGATGATTGTTCATTTCATTGATAAAATTGCATCGACTCCTCAATACTGCCCTTCAAATTCAACTTCAACTTTTGGGCATATAAGAATCTAGAAATTGCAAAAACCATTTCATTAGAGTTTACTAAAACTTCCATGTAGCTAGGGTTTCCCTAATTAAATATTCCAGCTGTATCTATGATCTGCCTGCGAGTAAGATATCCTGGAAATGTGTCTGCTTCAAGTTGCCTCTTCAACCAGAACCATCAGTGCCTTGGGCAGTTGAACATGGCATGCATTTACGAGACAATTGTGTAATTAGTAGTGTAGTTGAATAACAGGGCAATTCTCCTTTGGCAGCTATCAGTTTAGCAGACTGGTTAACAGCAGAATACCAAATTCCTGCCAAAGGAGAATCGCACTGATATTCTTCACTACCCTCTAGGAGTA | |||||||||
gi|164396191|gb|DB946336.1|DB946336 DB946336 full-length enriched cassava cDNA library Manihot esculenta cDNA clone CAS01_024_H0 CATGCCAAAGGAGATTTGCCC EST sequence (targeted fragment marked with yellow): ACAGAGGCATGGTAAATCCTCTTATAGTGATTGTATACAGCAGTAGAACGGTCTTTTAGGACTCAGCAGTACTCTATAACGAACTCATCAAGGCCCTTGCAAATCTCCTTTGGCGTGGGTAAGTCCTTCCCCAAATTAGATCCACCCCATCCACCAGTCCTTTCCCCTCCTCCAGCTGCTCTACCATTTGATCCACTTCCTCCACTTGGCTCGGTGGCTCTAATCACATTAACCCCAGGGGCAAATGGTGGGCCAGGTGGAGTATGAACTGCCAGGACATTCTCACCAGGTGGAGGCAAATTCTCAGGTGGGTCCCCTGCGTAAGTCCTGAGAGTGTCCCAAAAGGAGGCCCTGAGTCCATTACTAATACCATTGGTGTAATCCTCCGGGGAATCTTGAGTGGCGTTATCCTTGGATTGTTTGGTGGAGTTTCTGTTTTTGGGTTTAGAGTTAGTAACTCTGCCAATTTCAATGAAGCTACCCTGAAGAGGAGCAATCTTGTAAGGACGGAAGTAATAGGCGGTTTTACAACTGGGGCAAAAATTAACGGCTTGATAGCTGCTGCTAGTACTGTTAGGTCCTCCAAGACTGGAGCACTCTTGATTG | |||||||||