| mature miRNA: CCCATGTCACATCGGATGTTT species: Oryza sativa database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|86832883|gb|CI332489.1|CI332489 CI332489 Oryza sativa (japonica cultivar-group) shoot Oryza sativa Japonica Group cDNA clone CCCATGTCACATCGGATGTTT EST sequence (targeted fragment marked with yellow): GAAAGTGGGAAGCAATTTCATTCAGAAAAGAAGATCTACTCTAACAATCTATTCAATGCTGAACCATTTACAACCAAACATACAATGTGACAAGGGGCATTACATAGGGGCGACCACGTAGTCTTCTAGTCTACCGAAAGAACGATATATCCTAAGTTCTGGTGCAAAAATTTCCACCGTGGAAAGCTATAGTGTGGTCAGGCGGGTGCGCTAAGTATTTTGGATCATGAGCATGCTCTACCAAGAAGCATGCACCACAGCATTTACTCAAAATGCTGGATTCTGAACTCCGGTAATGAACAAAATGCCCAAGAATATATAATGATGTCATCCTAAGCAGGTGTTCATCCATCCATTTTCTCATATCTTTGCACATGGAGGATGAGTCAAAACAATGTAGATGGTCTACCATGAATCGTCATCGCTCATTGCTGTCGATCCATCTAATGGATGT | |||||||||
gi|89175280|gb|CI111799.1|CI111799 CI111799 Oryza sativa (japonica cultivar-group) Panicles two weeks after flowering Oryza sati CCCATGTCACATCGGATGTTT EST sequence (targeted fragment marked with yellow): AAAGGTGCCAAAATAAGACATACCAGTCGTACTTAAAATCATTCCAGATTACAGACTAGGGGCTGTTTGGTTTCCAGAGACTTATTCTAAGTCCCTGTCACATCGGATGTTTGGACACTAATTTGGAGTATTAAACATACACTAATTACATAACCCATTTCATAAGCTTGGACTAATTCGCGAGACGAATCTTTTGAGTCTAATTACGCCATGATTTTGACAATGTGATGCTACAGTAAACTTTTGATAATTATGGATTAATTAGGCTTAAAAAATTCGTCTCGCGGATTAGCTCTCATTTATGAAATTAGTTTTTTTATTAGTCCATGTTTAATACTCTAAATTAGCGTCCAAACATCCGATGTGACATGGGTTAAAAAGTTTTAGCCCCATCTAAACACCCCCGTCTATAGGTACCCCATACAACAACGTTCATTAAATCCAGGAATGCATCTTTCAAATAGTACAAAGCTCCAGCAATCTAACATTCATCAGGGCTAACAGGAACAGCACGTTTTCCAGCTT | |||||||||
gi|88272367|gb|CI386222.1|CI386222 CI386222 Oryza sativa (japonica cultivar-group) callus Oryza sativa Japonica Group cDNA clone CCCATGTCACATCGGATGTTT EST sequence (targeted fragment marked with yellow): GTCAAAATAAGACATACCAGTCGTACTTACAATCATTCCAGATTACAGACTAGGGGCTGTTTGGTTTCCAGAGACTTATTCTAAGTCCCTGTCACATCGGATGTTTGGACCCTAATTTGGAGTATTAAACATACACTAATTACATAACCCATTTCATAAGCTTGGACTAATTCGCGAGACGAATCTTTTGAGTCTAATTACGCCATGATTTTGACAACTGTGATGCTACAGTAAACTTTTGATAATTATGGATTAATTAGGCTTAAAAAATTCGTCTGGCGGATTAGCCTCTCATTTATGAAATTAGTTTTTTTATTAGCTCCATGTTTAATACTCTAAATTAGCGTCCAAACATCCGATGTGACATGGGTTAAAAAGTTTTAGCCCCATCTAAACACCCCCGTTTATAGGTACCCGATACCAGAAGGCTCATTA | |||||||||
gi|88221759|gb|CI221715.1|CI221715 CI221715 Oryza sativa (japonica cultivar-group) mixed callus (Normalized Library) and mixed s CCCATGTCACATCGGATGTTT EST sequence (targeted fragment marked with yellow): ATGAAATTAGTTTTTTTATTAGTCTATATTTAATACTTCAAAATTAGCGTCCAAACATCCAATGTGACATGTACTTTAAAAAATAAACACCCCCTAAAATAGTGCCTCCCTTTACATTAGCTGACTTAGTAGAGTATGAACAGAGTTGTTTAAATGGACACTGCCAGCTACTCACAATGAACAGAGTAACACAGACGCAGCGTACAAACTACCAGAGCGAGTAATTGCACACACGCACAAGAACGCGCTAACCTTGTAGCCGTGTAACCGTTGCGCGCCCGACGACAAGCCCGGATGCCGATGAATTCAAACCCAATCACATGAAAACCACACCCGAAACAAACGGACAAAACGAAAATGTGTGAGCCAGGCTTAGCTATCCTGGCCGTCCCTTCCTCACGCCCCCACCCGTGCCCAGCTGATGAGCTGAACCAGGTGGGCCCCACCTGTCAGCCTTGAGGAATGTTGGCGGCTCAGCCGTCCCCTCCGCTGCTGCCGGCGTTGGCTGCGGTGCTGCTCCGGCACTGGTCGGCGGGCCTGGACTCCATTG | |||||||||
gi|88345448|gb|CI656106.1|CI656106 CI656106 Oryza sativa (japonica cultivar-group) library (Kikuchi S) Oryza sativa Japonica Gro CCCATGTCACATCGGATGTTT EST sequence (targeted fragment marked with yellow): TTTAGATCTAGGGGTGTAAAGTTTTGACATGTCACATCGGATATACAGACACACATCTGAAGTATTAAACATAGACTAATAACAAAATAAATTATATAATCCACCTGTAAACCGCGAGACGAATTTATTAAGCCTAATTAATCCATCATTAGTAAATGTTTACTATAGCACCACATTGTTAAACCTATGGCGTAATTAGGCTTAAAAGATTCGCCTCATAATTTACATTCAATCTGTGTAATCAGTTATTTTTTCGTCTATATTTAATACTCCAATACTCTATACATATCACGTGTCCAATCATTCGATGTGATATGGTGTAAAATTTTACTATGAGATCTGAACAGGGCCATACTATCTGCGTACGTTGATGGCAGTCTTGACATGAGGTATCATGCAGATG | |||||||||
gi|88991781|gb|CI034919.1|CI034919 CI034919 Oryza sativa (japonica cultivar-group) etiolated shoot Oryza sativa Japonica Group c CCCATGTCACATCGGATGTTT EST sequence (targeted fragment marked with yellow): AGCAGAAGTCGCGGATTGCTTAGCAGCTCCAAATCATCAAATTTGCTGGCAATCAGAACAGCGAGATAGCAAAAGTCGCCGGATTGCTTAGGGGGTGTTTAGATGGGGCTAAAACTTTTTAGCCCAAGTCACATCAGATGTTTGAACGCTAATTTAGAGTATTAAACATAGACTAATAAAAAAACTAATTTCATAAATGAGAGCTAATCCGCGAGACGATTTTTTTAAGCCTAATTAATCCATAATTATCAAAAGTTTACTGTAGCATCACATTGTCAAAATCATGACATAATTAGACTCAAAAGATTCGTCTCGCGAATTAGTCCAAGCTTATGGAATAGGTTTTGTAATTAATGTATGTTTAATACTCCAAATTAGTGTCCAAATATCCGATGTGACATGGA | |||||||||
gi|29623261|gb|CB628272.1|CB628272 OSIIEb03L19.f OSIIEb Oryza sativa Indica Group cDNA clone OSIIEb03L19 5', mRNA sequence CCCATGTCACATCGGATGTTT EST sequence (targeted fragment marked with yellow): AAAGTTTACTGGAGCATCACATTGTCAACTTTATGACATAATTAGACTCAAAAGATTCGTCTCGCGAATTAGTCCAAGCTTATGGAATAGGTTTTGTAATTAATGGATGTTTAATACTCCAAATTAGTGTCCAAATATCCGATGTGACATGGACTTGGAATAAGTCCCTGGAAACCAAACAGCCCCTTAGCAGCTCCAAGTCACCGGATTTGCCTTCTACAGTTTGTTTTCTTCCACTGGCAACCTTTATTTTTTTTTAATGTTTGGCCCGTCTTTCCCTCCTTTGCCTGCCTGCCAATTCCCCCAGGCTCGCCACCCTGGCCGATCCGTGACCCAACCACCGCACCACCTCCACCTTACATTTTGCTGGATGCTCGAGCAGTCGGCGCAAAAGCTCTCCACCGACGAAGCTCGCCGCCCGTTGGATCTAGCAGCAGCATGTGGAGTTGGGGCAAGTGGGTGTCGGAGATCTGAAAGCTGCACAAGAACTCGCGCATCTGGCTCTGCACGTTTGCCACCGCCGTGCCATCAAGGGCCGCGCCACCCCCGTCCTCTTCAACTAACCGGAGATCGCGCACGTGCTTCCCCGCTCGGCTTCGGCAGCCCCCAACGACGTGAGAGCCACACGGCGCTCGCGACGGCGATGGACGACCCCGATCCGGCGGCGGTCGCGGC | |||||||||
gi|40486042|gb|BX897767.1|BX897767 BX897767 Oryza sativa library (Han B) Oryza sativa cDNA clone p250e08p3, mRNA sequence CCCATGTCACATCGGATGTTT EST sequence (targeted fragment marked with yellow): TTTTTTTTTAGTCTATATTTAATACTTCATATAAGTGTTAAACGTTCGATGTGATATGGTGTAAAATTTTTATATGGGACCTAAAAAGGGCCTTAGTTTGATCTCTTCAACCGTTTACGAAATTCCTGTCTTGTGAAGTATGTTTTCCGTTTACGTTAAAGTGACATGAAAACTATACCAGTGGCTGCGTTCGAATGTCCAACAATTGTTGGATGAAATTTTAGATTCTCATAGTATGCTTTTCAAACTGCTAAACGGTGTATTTCATATGAAAACTTTCTATATAAAGGTTGCTCTAAAATATCAGATTAATCCATTTTTCAAGTTTGTAATAATTAAAACTCAATTAATCACACGTTATTACCATCTCATTTTACGTGAAACACTTAATCTTTATTTTTAGGAGATACAAAC | |||||||||
gi|88486913|gb|CI424184.1|CI424184 CI424184 Oryza sativa (japonica cultivar-group) library (Kikuchi S) Oryza sativa Japonica Gro CCCATGTCACATCGGATGTTT EST sequence (targeted fragment marked with yellow): GCTAAGGGCCTGTTTGGGAAACATGGATTTATTCCCCAAGTCCCTATCACATCGGATGTTTGGACACTAATTTAGAGTATTAAACATACACTAATTACAAAACCCATTCCATAACCTTGGACTAATTCGCGAGACGAATNTTTTGAGTCTAATTACCCCATGATTTGACACTGTGATGCTACAGTAAACTTTTCATAATTATAGATTAATTAGGCTTAAAAAATCCGCCTCGCAGATTAGCTCGCATTTATGAAATTAGTTTTGTCATTAGTCTATATCTAATACCTCAAATCAGCGTCCAAACATCCAATGTGACATGTACTTTAAAAAATAAACACCCCCTAAAATAGTGCCTCCCTTTACATTAGCTGACTTACTAGAGTATGAACAGAGTTGTTTAAATGGACACTGCCAGCTACTCACAATGAACAGAGTAACA | |||||||||
gi|86501815|gb|CI144448.1|CI144448 CI144448 Oryza sativa (japonica cultivar-group) mixed shoot (Normalized Library) Oryza sativa CCCATGTCACATCGGATGTTT EST sequence (targeted fragment marked with yellow): GTATGAAATTAATTTTTAAATTAGTCTATGTTTAATACACTAAATTAACGTCAAACATCCGATGTGACATAGACTAACAAGTTTTAGCCCCATCTAATCACCCCCTAAGCATATCATGCTGTTACAGTTGACACCATCACGCGATGTAACCAAGGGTGCACGCAACACACACCAACCTGTCATCGCTCACACTGCTGCTGTGCTGTGCTGCACTCTTCTCTCCTGGCCTTGGGGAATAAAACAAGGCGATCGGTTTGCTTTCGTCTTCCTCCCCTTCTCGCCATGCAAAGGGCGCTTTGGTTCTTGGTTTCTTCTTCCTTTTGCCTCAGAAATAATCACACCGGCATTGATGAACCAAGCATATGCAGGTACTACCTCAGAGAAAAAAAAAACTCCTTCGGGTAAGCTAGAATGGAAATGAAGTTCTGCGCTAGCGCTGCCGCGGCTGCACTGCTGCTACAGCAGCAGTGCCCTAACAAACTATAGTAAAAGCTTTTGAGCTGGAGCACCGGAAAGCTGAATTCCTAGACCTAACATGACCTAAAGGCACCTAACTCTAATTAATCCAACCGGAACTAAGATAATACTGGAAAAGACAGGGGAAAAAAATCCAGGTACGGTACAGGACTAATACGGCTGGAAAAATGTAC | |||||||||
gi|44677530|gb|CR290964.1|CR290964 CR290964 Oryza sativa library (Han B) Oryza sativa cDNA clone p861h09p3, mRNA sequence CCCATGTCACATCGGATGTTT EST sequence (targeted fragment marked with yellow): CATGCAAGTGTACTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTCAAACCCAATATTTTTTTAAAAAAAAATGGGATTATCACTTCATTATTGTTCCAAACAAACAAAGGAAAACAAACAGGCAGTGAAACAACAACAATTCGGTTTACTAGTATACACTTTACAAACTCTCTAGCTTGTCTTTTGCATTTGCATCCAACCCATCAAGGGAATTNCCAGTTCGAGCTATTGGAATTTGCATCTAATCCCAGTNNACCTAAAGAGTTAGAAAAGATCCACATTCTTCCACTATTTAAGCTCCAAGCTACCGCACTTAAGCTTAATGAAACAAAACCNNNAACTTGCGCCGGTCAGCCTGTACAGCCGTACTTCAAAGAAACGGGTACCTGTACTCCAGGCGAATGCCCGATGTGACACGGGGGATCCTGTGTATGCTGCAATTTGCCAAAGAAACCCTGGCGAATGTTCTCCCGGGGAAGACAATTGGTTAATTGGGTCCCGGACAAATCCTTACAAAGAATCTGGGACGGGGCCCGGTCTAAGCAGAGACGCGTTCCGGCGGTGCCGACGTCCGGTGAAGCGGGAAATTTCCATAAAGGCGGGCCCTATGTCAGGCAGGTCAAAGATTGTTCCCTCCGCCCACAAGTAATTCCCCCAGGGGATTCACCCG | |||||||||
gi|88738976|gb|CI762484.1|CI762484 CI762484 Oryza sativa (japonica cultivar-group) root of seedling gamma-irradiated(45Gy), immi CCCATGTCACATCGGATGTTT EST sequence (targeted fragment marked with yellow): GAATTACAGAATCCGTCAATAAACCGCGAGACGAATTTATTCAGCCTAATTAATCCGTCATTAGCAAATGTTACTATAGTCTGTAGCACCACATTGTCAAATCATAGAGTAATTAGGCTTAAAAGATTCGTCTTGTAAATTAGTTGCAATCTGCAATTAGTTATTTTTTAGCCTATATTTAATACTTCATGCAGGTGTTCAAACGTTCGATGTGACAGGGCGAAACATTTTGAGATGGGATCTAAACATGGCTATAGTTTCAATTGTGTTGCATTGCAATATGGGACATTTTGGAATTAGGGCCAAAATGAGTTTGAGCCCTTCAATTTTTTAACATCATATAAATATTGTGAAAGTTGGTTCAGTGACATATAA | |||||||||
gi|58670885|gb|CK059571.1|CK059571 55078rsicek_6038.y1 Oryza sativa cv. PA64s panicle ferile cDNA library Oryza sativa Indica Gr CCCATGTCACATCGGATGTTT EST sequence (targeted fragment marked with yellow): GGATCCCCGGGCTGCAGGAATTCGGCAGAGGGTTGATTGACTGGTATGTTCAAGTGTGTAACCATGTCTTGTATTGTATTCTGATTTCTGACTGGTATGTTCCTTCAAGTTAACTTTGCATAGGCTTCGGTTAGTTCGGTACAAAAGATCCAATTTTCTTTTAAGAGTTGGTTTGAGGTACTCCATCTTATTCATTGGGATGAGTAGGTGATGGACATAAGTCATCGCAATTCATCATCTTTGCCAACATAGGCCGTGTTTGGATCCAGGGTGAAAAGTTTTGGCGTGTCATATTGGATATACAGACATATATATTTGAAGTATTAAACATAGACTAATAACAAAACAAATTACAGATTCTGCCTGTAAACTGCGAGATGAATTTATTAAGCCTAATTAATCCGTTATTAGCAAATGTTTACTGTAGCACCACATTGTCGAATCATGGAGCAATTAGGCTTAAAAGATCTCGCAATTTACACACAATCTGTATTTTTTTCCGTTTATATTTAATACTCTATACATGTGTCCAAACATTCGATGTGAGATGGTGAAAAATTTTGTCAGGGGATCTAAACAGGCCCATAATTGTAGGAAACTGCAAACTAATTAAGGT | |||||||||
gi|86869795|gb|CI316523.1|CI316523 CI316523 Oryza sativa (japonica cultivar-group) shoot Oryza sativa Japonica Group cDNA clone CCCATGTCACATCGGATGTTT EST sequence (targeted fragment marked with yellow): AAGACATACCAGTCGTACTTAAAATCATTCCAGATTACAGACTAGGGGCTGTTTGGTTTCCAGAGACTTATTCTAAGTCCCTGTCACATCGGATGTTTGGACACTAATTTGGAGTATTAAACATACACTAATTACATAACCCATTTCATAAGCTTGGACTAATTCGGGAGACGAATCTTTTGAGTCTAATTACGCCATGATTTTGACAATGTGATGCTACAGTAAACTTTTGATAATTATGGATTAATTAGGCTTCAAAATTCGTCTCGCGGATTAGCTCTAATTTATGAAATTAGTTTTTTTATTAGTCCATGTTTAATACTCTAAATTAGCGTCCAAACATCCGATGTGACATGGGTTAAAAAGTTTTAGGCCCATCTAAACACCCCCGTCTATAGGTCCCCTACAACAACGTTCATTAAATCCAGGAATGCATCTTTCAAATAGTAGCAAGCTACAGGCATCTAACTTCATCAGGGCTAACAGGAACAGCACGT | |||||||||
gi|88958307|gb|CI095826.1|CI095826 CI095826 Oryza sativa (japonica cultivar-group) Panicles more than 5cm stage Oryza sativa Jap CCCATGTCACATCGGATGTTT EST sequence (targeted fragment marked with yellow): TTTTTTTTTTTTTAAACTGCAAAACGAATTTATTAAGCATAATTAATCCATCATTAGCAAATGTTTACTGTAACACCATATTGTCAAATCATGTAGCAATTAAGCTTAAAAGATTTGTCTTGCAATTTACACGCATGTATCCAAACATTCGATGTAACATGGGGTCCAAAGCTAAGAAAAATGTACTAGTGCTAAAGATATTGGGGGTCTGTGCGTTTTACCTCTTAATTCGTGGTACGATAATATGGATTGAATTAGAGGGAGCAGCCACCTCTGCTGCTCTAAGGGAACGGCATTTATTAAACCACTATTTTTATTCATGCCAAACACCAGCACTAGTCCAGTGACAACCAAACGACAATCCTACACTCCAAAAGTTTACATTTAGGTTCTCAAATAGTGATACATAGCTTTGAGAGTTGAAACCGTCAGATACTGACATAGTTTATGAGGTGCCCCTGGAGTTGGCAAAAACTTCACGAAGATTGTCGCAGCTCTGGACGCACAAAGTCTGCATCAGCAGG | |||||||||
gi|86497175|gb|CI139808.1|CI139808 CI139808 Oryza sativa (japonica cultivar-group) mixed callus (Normalized Library) Oryza sativ CCCATGTCACATCGGATGTTT EST sequence (targeted fragment marked with yellow): AACATCCGATGTGACATAGACTAACAAGTTTTAGCCCCATCTAATCACCCCCTAAGCATATCATGCTGTTACAGTTGACACCATCACGCGATGTAACCAAGGGTGCACGCAACACACACCAACCTGTCATCGCTCACACTGCTGCTGTGCTGTGCTGCACTCTTCTCTCCTGGCCTTGGGGAATAAAACAAGGCGATCGGTTTGCTTTCGTCTTCCTCCCCTTCTCGCCATGCAAAGGGCGCTTTGGTTCTTGGTTTCTTCTTCCTTTTGCCTCAGAAATAATCACACCGGCATTGATGAACCAAGCATATGCAGGTACTACCTCAGAGAAAAAAAAAACTCCTTCGGGTAAGCTAGAATGGAAATGAAGTTCTGCGCTAGCGCTGCCGCGGCTGCACTGCTGCTACAGCAGCAGTGCCCTAACAAACTATAGTAAAAGCTTTTGAGCTGGAGCACCGGAAAGCTGAGTTCCTAGACCTAACATGACCTAAAGGCACCTAACTCTAATTAATCCAACCGGAACTAAGATAATACTGGAAAAGAAAGGGGA | |||||||||
gi|88258478|gb|CI361064.1|CI361064 CI361064 Oryza sativa (japonica cultivar-group) flower Oryza sativa Japonica Group cDNA clone CCCATGTCACATCGGATGTTT EST sequence (targeted fragment marked with yellow): GTGTAATTAGTTTTTTTGTCTATATTTAATACTCCATGTATGTGTCCAAACATTCGATGTGACAGGGTGAAAAGTTTTTGTGTGGGAACTAACAGGGCCTAAGCCAAAATTCAAAAGCTACCTAGCTTTGCTCTGTGGCATAACCTGACCCTGTATGCGAAAGCATTTATATGTCACCTTTTGCTAGTTGATTAGTTGATCAGAGCATTTTTGCTGCAAACCATCTTCTCAAGCCTTCAACAGAGCCTCAACCTCCTCCTGCACTATCCATAGTTCTGCAGTGATTTGCATTTAATGAAAAGATATGTCTATTCCTCTCTTTTGATTCATTACAAGCGTGTGGCTCAGATTTGCAATTTGCAACTGATACTACTTACATAAAGCCTTTTATATGGACTTG | |||||||||
gi|88387779|gb|CI587867.1|CI587867 CI587867 Oryza sativa (japonica cultivar-group) flower Oryza sativa Japonica Group cDNA clone CCCATGTCACATCGGATGTTT EST sequence (targeted fragment marked with yellow): GAGAGAAGGTCAGGCTGTCACCAGAAAGTCCTTTTTCCCCGGCTAGCTCCTGCATGCAGCTGATGAGCGTCCTGCATGGAGAAGAAAAGAACAGATGGTGACACTGAATTCCAAGAAAAAAACATATAGTACAAATGCATATATACCACAACAGACAATGCAAGCCTCCAGAACGGATGGGATCCGTCTGCATGAGGAATCAAAGGACAAGGATGATCAGCTGGAAACCAGATTATAAAATCATCAATCAATGCCTTTTGATTCGCCGCGCGCTTGTTTAATGTTTAATGGGGGGGATGAGTATCCGCTGTCACATGGGCACAGGAGGGGGGATGGATGCCATTACAATCCTAATCATGGAATCATGGATTAAACTTTTCCCCCTTTTCCTTTCATCAGGATACCAGGCCA | |||||||||
gi|89170156|gb|CI039433.1|CI039433 CI039433 Oryza sativa (japonica cultivar-group) etiolated shoot Oryza sativa Japonica Group c CCCATGTCACATCGGATGTTT EST sequence (targeted fragment marked with yellow): TTTTTAATTATGTATGTTTAATACTCCAAATTAGTGTCCAAATATCCGATGTGACATGGACTTGGAATAAGTCCCTGGAAACCAAACAGCCCCTTAGCAGCTCCAAGTCACCGGATTTGCCTTCTACAGTTTGTTTTCTTCCACTGGCAACCTTTATTTTTTTTTAATGTTTGGCCCGTCTTTCCCTCCTTTGCCTGCCTGCCAATTCCCCCAGGCTCGCCACCCTGGCCGATCCGTGACCCAACCACCGCACCACCTCCACCTTACATTTTGCTGGATGCTCGAGCAGTCGGCGCAAAAGCTCTCCACCGACGAAGCTCGCCGCCCGTTGGATCTAGCAGCAGCATGTGGAGTTGGGGCAAGTGGGTGTCGGAGATCTGAGAGCTGCGCAAGAACTCGCGCATCTGGCTCTGCACGTTTGCCACCGCCGTGCCATCAAGGGCCGCGCCACCCCCGTCCTCTTCAACTAACCGGAGATCGCGCACGTGCTTCCCCGCTCGGCTTCGG | |||||||||
gi|89174088|gb|CI041981.1|CI041981 CI041981 Oryza sativa (japonica cultivar-group) callus Oryza sativa Japonica Group cDNA clone CCCATGTCACATCGGATGTTT EST sequence (targeted fragment marked with yellow): TTATTAACAGTCGCATTCAGCATGTCATTTGAACTGAATGGATCAAGTAACACAGTTCCTGGCACAGAATATGAAAGTGGGAAGCAATTTCATTCAGAAAAGAAGATCTAGTCTAACAATCTATTCAATGCTGAACCATTTACAACAAACATACAATGTGACAAGGGGCATTACATAGGGGCGACCACGTAGTCTTCTAGTCTACCGAAAGAACGATATATCCTAAGTTCTGGTGCAAAAATTTCCACCGTGGAAAGCTATAGTGTGGTCAGGCGGGTGCGCTAAGTATTTTGGATCATGAGCATGCTCTACCAAGAAGCATGCCACCACAGCATTTACTCAAAATGCTGGATTCTGAACTCCGGTAATGAACAAAATGCCCAAGCATATATAATGATGTCATCCTAAGCAGGTGTTCATCCATCCATTTTCTCATATCTTTGCACATGGAGGATGAGTCACAAACAATGTACGATGGTCTACCATGAATCGTCATCGCTCCATTGCTGTCGATCCATCTAATGGATGTCCCAATCTGCTGTTT | |||||||||
gi|58682111|gb|CK070798.1|CK070798 66869rsicem_25823.y1 Oryza sativa cv. PA64s panicle ferile cDNA library Oryza sativa Indica G CCCATGTCACATCGGATGTTT EST sequence (targeted fragment marked with yellow): GCTGCAGGAATCGCACGAGGCCTACCGGATGCCTGAGAGAGGCTATGGACGCCGAGCCGGTGGTGGTGGCTATGACAGGTAAGGTTGCTCCCTTGGCTCTTGTTGCATTAGATACCTGAATTCCAAGCTGGAAAACGTGCTGTTCCTGTTAGCCCTGATGAATGTTAGATTGCTGTAGCTTTGTACTATTTGAAAGATGCATTCCTGGATTTAATGAACGTTGTTGTATGGGGTACCTATAGACGGGGGTGTTTAGATGGGGCTAAAACTTTTTAACCCATGTCACATCAGATGTTTGGACGCTAATTTAGAGTATTAAACATGGACTAATAAAAAAACTAATTTCATAAATGAGAGCTAATCCGCGAGACGAATTTTTTAAGCCTAATTAATCCATAATTATCAAAAGTTTACTGTAGCATTACATTGTCAAAATCATGGCGTAATTAGACTCAAAAGATTTGTCTCGCGAATTAGTCCAAGCTTATGAAATGGGTTATGTAATTAGTGTATGTTTAATACTCCAAATTAGTGTCCAAACATCCGATGTGACAGGGACTTAGAATAAGTCTCTGGAAACCAAACAGCCCCTATATAGTCTGTAATCTGGAATGATTTTAAGTACGACTGGTATGTCTTAAAAAAAAAAAAAAA | |||||||||
gi|88832290|gb|CI017524.1|CI017524 CI017524 Oryza sativa (japonica cultivar-group) green shoot Oryza sativa Japonica Group cDNA CCCATGTCACATCGGATGTTT EST sequence (targeted fragment marked with yellow): TACTGGTAACACCATGTCAAATCATGTATCAACTTAAGCTTAAAAGATTTGTCTTGCAATTTACACACATGTATCCAAACATTCGATGTAACATGGTGGTCCAAAGCTAAGAAAAATGTACTAGTGCTAAAGATATTGGGGGTCTGTGCGTTTTACCTCTTAATTCGTGGTACGATAATATGGATTGAATTAGAGGGAGCAGCCACCTCTGCTGCTCTAAGGGAACGGCATTTATTAAACCACTATTTTTATTCATGCCAAACACCAGCACTAGTCCAGTGACAACCAAACGACAATCCTACACTCCAAAAGTTTACATTTAGGTTCTCAAATAGTGATACATAGCTTTGAGAGTTGAAACCGTCAGATACTGACATAGTTTATGAGGTGCCCCTGGAGTTGGCAAAAACTTCACGAAGATTGTCGCAGCTCTGGACGCACAAAGTCTGCATCAGCAGGCACTGAAATGTCAACGGTGGGCCTCAACTGAGCACAGACTTCAATGGCACTATGGACGG | |||||||||
gi|89183736|gb|CI046301.1|CI046301 CI046301 Oryza sativa (japonica cultivar-group) callus Oryza sativa Japonica Group cDNA clone CCCATGTCACATCGGATGTTT EST sequence (targeted fragment marked with yellow): TTTTTTTTTTTTTATGAAATTAATTTTTAAATTAGTCTATGTTTAATACTCTAAATTAACGTCAAACATCCGATGTGACATAGACTAACAAGTTTTAGCCCCATCTAATCACCCCCTAAGCATATCATGCTGTTACAGTTGACACCATCACGCGATGTAACCAAGGGTGCACGCAACACACACCAACCTGTCATCGCTCACACTGCTGCTGTGCTGTGCTGCACTCTTCTCTCCTGGCCTTGGGGAATAAAACAAGGCGATCGGTTTGCTTTCGTCTTCCTCCCCTTCTCGCCATGCAAAGGGCGCTTTGGTTCTTGGTTTCTTCTTCCTTTTGCCTCAGAAATAATCACACCGGCATTGATGAACCAAGCATATGCAGGTACTACCTCAGAGAAAAAAAAAACTCCTTCGGGTAAGCTAGAATGGAAATGAAGTTCTGCGCTAGCGCTGCCGCGGCTGCACTGCTGCTACAGCAGCAGTGCCCTAACAAACTATAGTAAAAGCTTTTGAGCTGGAGCACCGG | |||||||||
gi|88199639|gb|CI199489.1|CI199489 CI199489 Oryza sativa (japonica cultivar-group) Panicles mixture of one, two, three weeks aft CCCATGTCACATCGGATGTTT EST sequence (targeted fragment marked with yellow): TTTTTTTTTTTTTTTGCCAAAATAAGACATACCAGTCGTACTTAAAATCATTCCAGATTACAGACTAGGGGCTGTTTGGTTTCCAGAGACTTATTCTAAGTCCCTGTCACATCGGATGTTTGGACACTAATTTGGAGTATTAAACATACACTAATTACATAACCCATTTCATAAGCTTGGACTAATTCGCGAGACGAATCTTTTGAGTCTAATTACGCCATGATTTTGACAATGTGATGCTACAGTAAACTTTTGATAATTATGGATTAATTAGGCTTAAAAAATTCGTCTCGCGGATTAGCTCTCATTTATGAAATTAGTTTTTTTATTAGTCCATGTTTAATACTCTAAATTAGCGTCCAAACATCCGATGTGACATGGGTTAAGAAGTTGTAGCCCCATCTAAACACCCCCGTCTATAGGTACCCCATACAGACAACGTTCATTAAATCCAGGAATGCATCTTTCAAATAGTACAAAGCTACAGCAATCTAACATTCATC | |||||||||
gi|89169900|gb|CI110259.1|CI110259 CI110259 Oryza sativa (japonica cultivar-group) Panicles less than 5cm stage Oryza sativa Jap CCCATGTCACATCGGATGTTT EST sequence (targeted fragment marked with yellow): AATTANATTCATTACTTGCAAAGGACCCTACCTCCCAGTTTCATTCCTGCCTCATCTCAATCACAGGAGTACTACAAACTTCTGCAAACATGCAACATCTCCATCTATATCTGATGCCGATTGCTTCTACCCCTCGCTATCTCAAACCTCATCCTCCTAACTAAGGGGCTGGTTGGTTTTCAGGGACTTATTCACCTCAGATATTTAAACACTAATTTAAAATATTAAACATCCACTAATTACAAAACCCATTTCATAAGTTTAGACTAATTCGCGAGACAAATCTTTTAAGTCTAATTACAACATGACTTTGACCATATGATGCTATAGTAAACTTTTAATAATTATGGATTAATTAGGCTTAAAAAATTCGCCTCACAGATTAGCTCTCATTTATGAAATTAATTTTTAAATTAGTCTATGTTTAATACTCTAAATTAACGTCAAACATCCGATGTGACATAGACTAACAAGTTTTAGCCCCATCTAATC | |||||||||
gi|86835331|gb|CI346806.1|CI346806 CI346806 Oryza sativa (japonica cultivar-group) flower Oryza sativa Japonica Group cDNA clone CCCATGTCACATCGGATGTTT EST sequence (targeted fragment marked with yellow): AGTTATTTTGTAGTATATATTTAATACTTCATGCATGTGTTCAAACGTTCCATGTGACATGGTGTAAATTTTTGGGGTGAGATCAGTATCGTCGTGCCTGTAGCAGTTAAAGCAATTGATATTTGCCTTTATTTGATTAAAGACCTTTATTCATGTTGGGATACTACATCACTACATGCCAGTTTTTATTGGTAGTACTAACTGATCGAACGATCATGCAATAGGATAACAATCCGATGGATCGATCGATCACTCAGCTAGCTAGCTGGCGAAGTTGCGCTGGTTGTAGCAGTCGAGGTTGCTGCCGTAGCCTGCGCCGAGCATGTCGCAGTAGCGCTTGTAGTAGCCGATGCGGTCGACGTTGGCGTCGTTCTGGCCGACGCCGCACTCGATGCCGCCGTTGATGATGTTGGTGATGACGCCATACCCGGGGACGCGGCCGGC | |||||||||
gi|88513664|gb|CI441170.1|CI441170 CI441170 Oryza sativa (japonica cultivar-group) 4th leaf leaf 3mM SA(salicylic acid) for 1 da CCCATGTCACATCGGATGTTT EST sequence (targeted fragment marked with yellow): GCTAAGGGCCTGTTTGGGAAACATGGATTTATTCCCCAAGTCCCTATCACATCGGATGTTTGGACACTAATTTAGAGTATTAAACATACACTAATTACAAAACCCATTCCATAACCTTGGACTAATTCGCGAGACGAATCTTTTGAGTCTAATTACGCCATGATTTGACAATGTGATGCTACAGTAAACTTTTCATAATTATAGATTAATTAGGCTTAAAAAATTCGTCTCGCAGATTAGCTCGCATTTATGAAATTAGTTTTTTTATTAGTCTATATTTAATACTTCAAATTAGCGTCCAAACATCCAATGTGACATGTACTTTAAAAAATAAACACCCCCTAAAATAGTGCCTCCCTTTACATTAGCTGACTTAGTAGAGTATGAACAGAGTTGTTTAAATGGACAC | |||||||||
gi|86490889|gb|CI133522.1|CI133522 CI133522 Oryza sativa (japonica cultivar-group) Panicles less than 5cm stage and Panicles two CCCATGTCACATCGGATGTTT EST sequence (targeted fragment marked with yellow): TTTTTTTTAACGTCAAACATCCGATGTGACATAGACTAACAAGTTTTAGCCCCATCTAATCACCCCCTAAGCATATCATGCTGTTACAGTTGACACCATCACGCGATGTAACCAAGGGTGCACGCAACACACACCAACCTGTCATCGCTCACACTGCTGCTGTGCTGTGCTGCACTCTTCTCTCCTGGCCTTGGGGAATAAAACAAGGCGATCGGTTTGCTTTCGTCTTCCTCCCCTTCTCGCCATGCAAAGGGCGCTTTGGTTCTTGGTTTCTTCTTCCTTTTGCCTCAGAAATAATCACACCGGCATTGATGAACCAAGCATATGCAGGTACTACCTCAGAGAAAAAAAAAACTCCTTCGGGTAAGCTAGAATGGAAATGAAGTTCTGCGCTAGCGCTGCCGCGGCTGCACTGCTGCTACAGCAGCAGTGCCCTAACAAACTATAGTAAAAGCTTTTGAGCTGGAGCACCGGAAAG | |||||||||
gi|88260975|gb|CI364551.1|CI364551 CI364551 Oryza sativa (japonica cultivar-group) flower Oryza sativa Japonica Group cDNA clone CCCATGTCACATCGGATGTTT EST sequence (targeted fragment marked with yellow): GGAAGTGGGAAGCAATTTCATTCACAAAAGAAGATCTACTCTAACAATCTATTCAATGCTGAACCATTTACAACAAACATACAATGTGACAAGGGGCATTAGATAGGGGCGACCAGGTACTCTTCTAGTCTACCGAAAGAACGATATATCCTACGTTCTGGTGCAAAAATTTCACCGTGGAAAGCTATAGTGTGGTCAGGCGGGTGCGCTAAGTATTTTGGATCATGAGCATGGTCTACCAAGAAGCATGCCACCACAGCATGTACTCAAAATGCTGGCTTCTGAACTCCGGTAATGAACAAGATGCCCACGCATATATAATGATGTCATCCTAAGCAGGTGTTCATCCATCCATTTTCTCATATCTTTGCACATGGAGGATGAGTCACAAACAATGTACGATGGTCTACCATGAATCGTCATCGCTCCATTGCTGTCGATCC | |||||||||