| mature miRNA: CCCGCCTTGCATCAACTGAAT species: Glycine max database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|213612249|gb|DB956902.1|DB956902 DB956902 full-length enriched soybean cDNA library, mixture of seedling, young plant, adult CCCGCCTTGCATCAACTGAAT EST sequence (targeted fragment marked with yellow): GATCTCTCTCTTGATCTTCCCTTCCCTATCACTCACACTCTCCTCTCACTCTTTCCCATCCAACAAAATGGCCCAAAATAGTAACACTGAGGCCCAAAGCCCACCAACCCCCGAGGCCCGACCAGTCGGCGGCACCGAATTCAGCTGGTGCAAGGCCGTTCCCGCCGGCACCGGCGTGACAGTGCTAAGCCTCCTCCTCTCAAAACCGCCGCAAATTGCTGTTGTCCAAAATGCCCTCCACAAACTTCAAAATTCCCACCCTATCCTCCGCTCCAAGATCCACCTCGATCCCTCCAACAATACGTTCCACTTCCTCACCCCTCCCACTCCCACCGTCCAAATTCACCCCTTCGATATCACATCAACGGCCACCATCATCCAATCCCAGTCCAACGGCCACGATCCCTTCCACGCGCTCCTCGAGCACGAGATGAACCAGGACACGTGGCGCGACTACACGATCCCTTCAGCCGGCGCCGACGTCCTCCACGCCGCCGTGTATAATATCAGCCACGATCGCTTCGCCGTGTTCCTCCGCCTCCACACAGCTGCGTGCGACCGCGCCGCTGCCGTGGCGCTGCTCAAGGAGCTCCTCCGCCTGGTCACCGG | |||||||||
gi|208031532|gb|GD827148.1|GD827148 454GmaGlobSeed569797 Soybean Seeds Containing Globular-Stage Embryos Glycine max cDNA, mRNA CCCGCCTTGCATCAACTGAAT EST sequence (targeted fragment marked with yellow): TATTCCCCTGTGAACGAGTTGATGCAAGGTGGGGCAAACTGGACTGTGAACAGAATGCATGTGAAATTATTGGTAGTACATCAATTTTTAGGAAGATATGGAAGAAATCTACCTAAAAATGATTGACATGCATACTATGTGAGAGGTGTTAAATTTTGACCTTTTGATAATTGTTTTAGATAGGCCAAGGGTTATTTGCTGGTTATACACCAGAGTACGTGAATACATTTTATCTTC | |||||||||
gi|151410934|gb|EV280749.1|EV280749 GLNAX02TF JCVI-SOY3 Glycine max cDNA 5', mRNA sequence CCCGCCTTGCATCAACTGAAT EST sequence (targeted fragment marked with yellow): GGAATCCACTGCAGGCCTTGTTTCATAACATCGAACAAGTCTCAAGCTTTGTTCAACACCATCTCTCTAATTTCATAGGCATTCATTTCCAGCCATCAGGACCCCATAGTGGCTCTCTCTTATCAATCTCTTCCTCTACCAAAGCCCCACTTGCAAAAACTGCATCTTCTGTACAACTCGGTGATACTGCTGTCAAGGAAAAGTCTGCTGCCCCAGTTACTAAGGAAGAGCTTGGAAGGGCTACTTGGACTTTCCTTCACATTCTTGCAGCTCAGTACCCGGATAGTCCTACAAGACAACAGAAGAAGGATGTAAAAGAACTGGTACAGATGTTACCTCGAATATACCCTTGCGGGGAATGTCGAGATCACTTTAAAGAAGTTCTTAGAGCAAATCCTGTACAGACTGGATCGCATGCTGAATTTTCTCAGTGGTTATGTCATGTGCATAATGTTGTTAATAGAAGCCTTGGCAGACCAATATTCCCCTGTGAACGAGTTGATGCAAGGTGGGGCAAACTGGACTGTGAACAGAATGCATGTGAAATTATTGGTAGTACATCAATTTTTAGGAAGATATGGAAGAAATCTACCTAAAAATGATTGACATGCATACTATGTGAGAGGTGTTAAATTTTGACCTTTTGATAATTGTTTTAGATAGGCCAAGGGTTATTTGTTGGTTATACACCAGAGTACGTGAATACATTTTATCTCCAATATTCATAACTCGGTTTATTATAGTAAATGAAAATTTAAGCCCGGATTATATTGATT | |||||||||
gi|298176920|gb|HO026927.1|HO026927 ocpsga0_0236_H08.ab1 Soybean immature seed full-length-enriched cDNA library Glycine max cDN CCCGCCTTGCATCAACTGAAT EST sequence (targeted fragment marked with yellow): GGGGGGGCACGGATCTTCTCCCACGCTATCTCAGGTAACATGCCTGAGAATCCACTGCAGACCTTGTTCCATAACATTGAACAAGTCTCAAGCTTTGTTCAACACCATCTCTCTAATTTCATAGGCCTTCATCACCACCCATCTTCAGGACCCCTCTTGTCCATCTCTTCCTCCACCAAAGGCCCACTTTCAAAAACCGCAACTTCTGTACAACTCGCTGATACTGCTGTCAAGGAAAAGTCTGCTGCCCCAGTGACTAAGGAAGAGCTTGGAAGGGCTACTTGGACTTTCCTTCACATCCTTGCAGCTCAGTACCCGGATAATCCTACAAGACAACAGAAGAAGGATGTAAAAGAACTGGTACAGATGTTACCTCGAATATACCCCTGCAGGGAATGTCGAGATCACTTTAAAGAAGTTCTTAGAGCAAATCCTGTACTGACTGGATCACATGCTGAATTTTCTCAGTGGCTATGTCATGTGCATAATGTTGTTAATAGAAGCCTTGCCAAACCGATATTCCCCTGTGAACGAGTTGATGCAAGGTGGGGCAAACTGGACTGTGAACAGAATGCATG | |||||||||
gi|208117815|gb|GD915019.1|GD915019 454GmaGlobSeed657668 Soybean Seeds Containing Globular-Stage Embryos Glycine max cDNA, mRNA CCCGCCTTGCATCAACTGAAT EST sequence (targeted fragment marked with yellow): TCTCAGTGGCTATGTCATGTGCATAATGTTGTTAATAGAAGCCTTGCCAAACCGATATTCCCCTGTGAACGAGTTGATGCAAGGTGGGGCAAACTGGACTGTGAACAGAATGCATGTGAAATTATTGGAAGTACATCAATTTTTGGGAGGATATGGCAGAAATCTACGTAAAAATGATTGCCACACATACTATGCGAGATGTGTTAAATTTTGACCTTAGTAAAAAATAAGGTTTAGGTAATAA | |||||||||
gi|192301987|gb|FG995157.1|FG995157 GLLEI12TF JCVI-SOY1 Glycine max cDNA 5', mRNA sequence CCCGCCTTGCATCAACTGAAT EST sequence (targeted fragment marked with yellow): GGGAGTCGGACTTTGCTTGTTGTTTTCCCCGTTGAGAGTTCAGAATTCAGATATTCCCTTCGTGTGTTTCGTAACTTATTCGGTATCCTTAAATCGCAACTCAAAACCCTAGCCATTGAATTTGGGCACGGATCTTCTCCCACGCTATCTCAGGTAACATGCCTGAGAATCCACTGCAGACCTTGTTCCATAACATTGAACAAGTCTCAAGCTTTGTTCAACACCATCTCTCTAATTTCATAGGCCTTCATCACCACCCATCTTCAGGACCCCTCTTGTCCATCTCTTCCTCCACCAAAGGCCCACTTTCAAAAACTGCAACTTCTGTACAACTCGCTGATACTGCTGTCAAGGAAAAGTCTGCTGCCCCAGTGACTAAGGAAGAGCTTGGAAGGGCTACTTGGACTTTCCTTCACATTCTTGCAGCTCAGTACCCGGATAATCCTACAAGACAACAGAAGAAGGATGTAAAAGAACTGAGCAAATCCTGTACTGACTGGATCACATGCTGAATTTTCTCAGTGGCTATGTCATGTGCATAATGTTGTTAATAGAAGCCTTGCCAAACCGATATTCCCCTGTGAACGAGTTGATGCAAGGTGGGCAAACTGGACTGTGAACAGAATGCATGTGAAATTATTGGAAGTACATCAATTTTTGG | |||||||||
gi|213603446|gb|DB970487.1|DB970487 DB970487 full-length enriched soybean cDNA library, mixture of seedling, young plant, adult CCCGCCTTGCATCAACTGAAT EST sequence (targeted fragment marked with yellow): GAGCATCTCAGTGTGTTGTTTCCCACAGCAGCGTTGCCCCACTCTCTTCAAACCCACCATTACCAAACAAACCCTCTCCTTCCCCACCGCTTCCGCTTTCTCCTCCGTAACTCAACTCAGCGTGGGCCAGGATTTACCCGCCAACTACAGCGATTGGGTTCCCAGTCCCGACCCCGAGCTTCGCAGAAGATGCGGCATTCTGCTCCACCCGACGTCGTTTCGCGGCCCCTACGGCATCGGCGATCTCGGCGACGAGGCGTTCCGTTTCATCGACTGGCTCCACCACTCGGGTTGCTCCGTCTGGCAGGTTCTTCCTCTCGTGCCACCTGGCAGAAAGGCCAACGAAGAAGGATCCCCTTATTCTGGCCAGGATGCGAATTGTGGCAACACGCTCTTGATCTCTCTTGAGGGCCTCGTCGAGGATGGGTTGTTGGAAAAACACGAGCTTCCTCAACCAATTGATGCAGGGCGGGTTAATTTTTCACTCGTTGCTGATCTTAAGGATCCTTTGATAACTAAGGCTGCAGAGAGGCTCATTTCAAGTGAAGGGGAACTCAAAACACAGCTTGAGAATTTTC | |||||||||
gi|193542140|gb|FK493998.1|FK493998 454GmaGlobSeed228630 Soybean Seeds Containing Globular-Stage Embryos Glycine max cDNA, mRNA CCCGCCTTGCATCAACTGAAT EST sequence (targeted fragment marked with yellow): ATAATGTTGTTAATTAGTAAGTCCTTTGTCCAAACCGATATTCCCTGTGAACGAGTTGATGCAAGGTGGGGCAAACTGGACTGTGAACAGAATGCATGTGAAATTATTGGAAGTACATCAATTTTTGGGAGGATATGGCAGAAATCTACGTAAAAATGATTGCCACACATACTATGCGAGATGTGTTAAATTTTGACCTTTAGAAAAATGGTTTAGATAGGCCAAGGGTTATTTGATGGCATTACACCGGAGTACGTGAATACATTA | |||||||||
gi|208168987|gb|GD971400.1|GD971400 454GmaGlobSeed714049 Soybean Seeds Containing Globular-Stage Embryos Glycine max cDNA, mRNA CCCGCCTTGCATCAACTGAAT EST sequence (targeted fragment marked with yellow): CTCTTTTCAGTACCCGGATAATCCTACAAGACAACAGAAGAAGGATGTAAAAGAACTGGTATAGATGTTACCTCGAATATACCCTTGCGGGGAATGTCGAGATCACTTTAAAGAAGTTCTTAGAGCAAATCCTGTACAGACTGGATCGCATGCTGAATTTTCTCAGTGGTTATGTCATGTGCATAATGTTGTTAATAGAAGCCTTGGCAAACCAATATTCCCCTGTGAACGAGTTGATGCAAGGTGGGGCAAA | |||||||||
gi|192330116|gb|FK019771.1|FK019771 GLNDE25TF JCVI-SOY3 Glycine max cDNA 5', mRNA sequence CCCGCCTTGCATCAACTGAAT EST sequence (targeted fragment marked with yellow): GAAGAGGAGATGGGGGGTGGAAATCAAGAGGCAGTGAAGCAGCTGCAGACCCTGATGGAAAATGTGGATGATGAGCAGCTGAAGAACACATTCCAGATTATGCACCAGGGTTATCAAACTGAAACGTTAATACGGTTTCTCAAAGCTAGGGACTGGAATATTGCCTAAGCCCATAAAATGTTAATTGATTGTTTGAACTGGAGGGTGGAAAATGAGGTTGACAATGTTTTAAGGAAGCCTATCCCCATGGATTTGTACAGAGCCATACGGGATTCACAACTCATAGGAATGTCTGGTTACTCAAAGGAGGGTCTACCTGTCATTGCTGTTGGTGTTGGTCTCAGTACATATGATAAAGCATCTGACAAATACTATATACAATCACACATCCAACTAAATGAATATAGGGATCAAGTGATCTTGCCAACAGCTACAAGGAAACATGGACGGTACATTGGCACCTGTGTGAAAGTCTTGGATATGACTGGTTTAAAATTTTCAGCATTGAATCAACTGAGGTTGTTGACTGCTATATCTACAATAGATGACTTGAACTATCCGGAAAAGACAGACACATACTATATTGTTAATGTGCCATATGTATTCTCAGCGTGCTGGAAGGTTGTGAAGCCTCTTTTGCAAGAAAGAACAAGGAGAAAAATCCAGGTGCTGCAAGGTGGGAAGGAGGAATTACTGAAGGTAATGGACTATGCATCCCTCCCACACTTCTGCAGAAAAGAAGATTCCAAGTCTTCCAAACATCATGCATTAGGAAACATTAAATTGTCTCTCCTTCAATCACGCCTTCCATCAACAACTCTACAATCACATCAAGCAAC | |||||||||