| mature miRNA: CCGACGGAATTACTGACGGA species: Populus trichocarpa database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|73893236|gb|DT495974.1|DT495974 WS01122.BR_A17 PT-P-FL-A-2 Populus trichocarpa cDNA clone WS01122_A17 5', mRNA sequence CCGACGGAATTACTGACGGA EST sequence (targeted fragment marked with yellow): GAAAGCAAACAGAGTTGCAAAGAAAAAAAGGGGCAAAAACAAAAACAAAAAAACCCCTTTTAGTATTCTTTTATAGATAGATTTCAGTTATCAAGAATTGCCAAAGTCTCAGCTGCATTGATTGCATTTTGAAAATTTTGGATCAAATTATGAGGTGAATCAGATCTGGATCAAGGAGATAGAGTGATTTTGAATAGAAGTGAAAATGAGCGAGGGCCAGAAATTCCAGCTAGGGACCGTTGGGGCTTTGAGTTTATCAGTGGTTTCGTCGGTTTCTATTGTGATTTGCAATAAGGCTCTCATTAGCACTCTTGGCTTCACTTTTGCCACAACATTGACAAGCTGGCATCTTCTGGTCACGTTTTGTTCTCTTCACATGGCATTATGGATGAAATTGTTTGAACACAAGCCTTTTGATGCAAGAGCGGTAATGGGATTTGGCATACTAAATGGGATATCCATTGGACTTTTGAATCTTAGCTTGGGTTTCAACTCAGTTGGTTTTTATCAGATGACAAAATTGGCTATCATCCCATGTACTGTTCTTTTGGAGACGCTTTTCTTCCGTAAGCAATTCAGTCGGAGTATCCAGCTTTCACTGACCATTCTTCTTATGGGTGTTGGAATTGCAACTGTGACTGATCTTCAGCTCAATGTCCTGGGATCTATCTTGTCTCTGCTTGCAGTCCTTACAACCTGTGTTGCTCAGATTATGACCAATACCATCCAGAAGAAGTTCAGAGTCTCTTCAACACAACTTCTGTACCAGTCTTGCCCCTATCAGGCATTAACCTTGTTCATTGTTGGCCCATTCCTGGATGGGCTTCTGACTAACAAAAACGTTCTT | |||||||||