| mature miRNA: CCGTCACTGATGACTCATCT species: Oryza sativa database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|88281327|gb|CI402723.1|CI402723 CI402723 Oryza sativa (japonica cultivar-group) callus suspension-cultured cells treated with CCGTCACTGATGACTCATCT EST sequence (targeted fragment marked with yellow): AGCAATAGAATCAAATCATAATTAATGAGCTGATGAATTACATATAACAAAAAATATATTACATATAAATAACAATATGAGCCGGACTCTACCAGAGAAAATACTCAAAGCAATCAATATATACGAACACAATCAATCGATCGCCTTCGAAGAGATACACAAAGTATCTTCTTACTCTAATTTAGAAGGCCATGAGACCAACAACTATGGCACCCAAACTAAGACCAACTAGAGATGCAACACCAGCGGGCTGGCTTGCTGAGTTAGATGGAGGCACGGGCCGGCCACCAGCCGTTGGCGGCATTGCGTTCGGTGCCATTGCTGTCGGTGTGCGTGGACGAGGGGTCATCGGTGATGGGGCCGGGTTGCTGCCCGGTGGCGGCCTCAACCTTGACAGCGACCTTCATCCCTCCGGTGCAATG | |||||||||
gi|86485386|gb|CI128019.1|CI128019 CI128019 Oryza sativa (japonica cultivar-group) Panicles more than 5cm stage and Panicles one CCGTCACTGATGACTCATCT EST sequence (targeted fragment marked with yellow): TTTTTTTTTTTTTTTTTTTACTTGGCATAACTCTCCCTCCCCTTTTATTAGTAGATAGATTTCGTTACAGTAAACAAATTACACCTTCTATTAGTAGATAGATTTCGTTACAGTAAACAAATTACACCTTCTATTAGTAGATAGATTTCGTTACAGTAAAACTTAAGCCCGTCACAGATGACACCTATCAGTGACGGGCCGTAGTTTAGGTCCGATTGAGATAATATTCCATATCTCAAACGGGCCTGAAGTTAGGGCCCGTCACAGATGACCATCATCCGTGACGGGCACCAACTTTAGACCCAATTGAGATAACATTCCATATCTCAAACGGGCCTTAAGTTGGGGCCCGTCACAGATGACCATCATCCGTGACGTACACCAACTTGAGGCCCGTCATAGATGACTCATCAATGACGGACTATATATTAATCCCCGGTTGACATGACTTAATCTCTATGGGGCATTAACTAAAGCCCGTC | |||||||||
gi|55433910|gb|CV730070.1|CV730070 FLO--03-G21.b1 Rice flower lambda phage cDNA library (FLO) Oryza sativa Japonica Group cDNA c CCGTCACTGATGACTCATCT EST sequence (targeted fragment marked with yellow): TTTTTTTTTTTTTTTTGTTTTTTTTTTTTTTTTGAACAGAAACTCACTTACATCGTTTTAATTTACTGAAGCTGTGAAAAATCAATATACTTAGTTACATCAGTTCACTCCAATAACTGCAATTTACAGCAGTTTCTAAACTGATTGGGGATCGATTTGTTGTAAGCAGGAGAACAGAAGAAGCTGCTGCCGAGGGATGAGGCATCAGTGATGGGTGAGCCGGCCGGACGGGGTGCTGTCACTTTCGACGGCAGTAGATGGGGCACGCAGTACCGCTGATGTCGCCAGTGGATGGCCAACAGGGAGCTGTCACTTGCGATGCACATCGGCGGCGGCGACACGGACAGGGCCACACCAGGGCCGAGAAGACCGATGCCACAAGGTTGGAACAGAGACGACGATGAGCGATGAAGGCGACGAGGATGTTCGCGGGAGGA | |||||||||
gi|33819062|gb|CF335356.1|CF335356 JMT--05-A01.g1 AtJMT-overexpressing transgenic rice plasmid cDNA library (JMT) Oryza sativa J CCGTCACTGATGACTCATCT EST sequence (targeted fragment marked with yellow): TTTTTTTTTTTTTTTAATTAATGAGCTGATGAATTACATATAACAAAAAATATATTACATATAAATAACAATATGAGCCGGACTCTACCAGAGAAAATACTCAAAGCAATCAATATATACGAACACAATCAATCGATCGCCTTCGAAGAGATACACAAAGTATCTTCTTACTCTAATTTAGAAGGCCATGAGACCAACAACTATGGCACCCAAACTAAGACCAACTAGAGATGCAACACCAGCGGGCTGGCTTGCTGAGTTAGATGGAGGCACGGGCCGGCCACCAGCCGTTGGCGGCATTGCGTTCGGTGCCATTGCTGTCGGTGTGCGTGGACGAGGGGTCATCGGTGATGGGGGCCGGGTTGCTGCCGGTGGCGGCCTCAACCTTGACAGCGACCTTCATCCCTCCGGTGCAATGGCCATTGAAGCCACATATGAAGTANCGGGTGCCGGTAGCGGTGAGAGGGGATGGTGTCATCGCCGGAGTTGGAAGGTGGCGATAGGGCTGGAGCTGGAGCATGAGTCGTAGTCGGCCTTGTTCACCTCCACCACATCATGCGCCGCTGGAGAATACTTGAACACTATCTGATCTCCGGCACGAAAGTTGATGTTGGAAACCCACTGGTCAT | |||||||||
gi|29640615|gb|CB645624.1|CB645624 OSJNEb07H04.r OSJNEb Oryza sativa Japonica Group cDNA clone OSJNEb07H04 3', mRNA sequence CCGTCACTGATGACTCATCT EST sequence (targeted fragment marked with yellow): TAGGCAGCAACGCACTCTAGATGTAACAGGAATTTCACACCCGCTTCAAGTTGCTGTTGAGGAATCTGCTTTAAGACAAGCGTTGAGTAATCTCATAGAGGGTGCTCTTCTACGCACTCAGCTTGGTGGCCGAGTTCAGATATATGCTGGTGAAGCACCTGCAGGAGGCATTCTCGTTGTCATTGATGATGATGGTCCTGACATGCAATACATGACACAGATGCATTGCCTTGCTCCATTCGGGTCAGACCTTGCGGATGGTATGCATGAAGATAATATGACATGGAATTTCATTGCAGGATTAACAGTTGCCCGTGAGATACTTGAGAACTATGGCTGTGTTTTGCGTGTGATATCGCCTCGGAGACCTGATGCAATTATAGGGACTGGAGGTAGTCGTATTGAGATATGGTTGCCAACTTCACAGACAGAACTATTTGAGATCACTGAAGGAGCTTAGCTGAATTTTAGTAATCAACGCATGTTTAGAAGATAAAGGTCATGTTTAATTGGCATGATGGAGATCATACCACCTTTTCTGTTTTGGAAATGTTGGAACGACGGCTGCAAAGTGAGCTTATACTTTTGATTAGATCAGTCATCAGTGAAGCACCATATGAACATCTTTACACGCATTCCAGTAAAGCATGTTACTTGTGGAAAAAGCACCATATGAACACCTTTGGACGTTTTTGTAGCATAAGGAACTGTAGCACGGTATACAGTTTGTATGGTAGAGCTAGATCCCGCAGTTATGAAAAGAAGTACTTTTTTGTTGTTTCGCAAAAAAAGGGAAAAAAAACTCGAGGGGGGGCCCGGTACCCAGCT | |||||||||
gi|88422099|gb|CI688894.1|CI688894 CI688894 Oryza sativa (japonica cultivar-group) library (Kikuchi S) Oryza sativa Japonica Gro CCGTCACTGATGACTCATCT EST sequence (targeted fragment marked with yellow): GGTAGTCGTATTGAGATATGGTTGCCAACTTCACAGACAGAACTATCTGAGATCACTGAAGGAGCTTAGCTGAATTTTAGTAATCAACGCATGTTTAGAAGATAAAGGTCATGTTTAATTGGCATGATGGAGATCATACCACCTTTTCTGTTTTGGAAATGTTCGAACGACGGCTGCAAAGTGAGCTTATACTTCTGATTAGATCAGTCATCAGTGAAGCACCATATGAACATCTTTACACGCATTCCAGTAAAGCATGTTACCTGTGGAAAAAGCACCATATGAACACCTTTGGACGTTTTTGTAGCATAAGGAACTGTAGCACGGTATACAGTTTGTATGGTAG | |||||||||
gi|88272409|gb|CI386264.1|CI386264 CI386264 Oryza sativa (japonica cultivar-group) callus Oryza sativa Japonica Group cDNA clone CCGTCACTGATGACTCATCT EST sequence (targeted fragment marked with yellow): CAATAGAAATGTTTGGAGACTTGGTATTAATTTGGTACATGATACAATAGTTTCCCTAGATATTATCTAATCAGAGTGCACAGCTGCGGACAGCATGTCAAAAATGGAATATTGCCTGACAAAATGCAGCATGTCCAAAGAAGTCTTGGAAAAGGTACGTAATATTTGGCACTAGAAAATTATGAGGGCCCCTTATTCAAGAATTGAATGCTTTTGGGCCAAATGAGTACGGTGATAATGTAGTGCAAAGGAGGCGACCGCATGTCAGCTATAAGAAGACGGGAAAAATATCAAACAGTCTACTGTGCCTGAAGGAAAATTTCATGACACGGTGTCAGGTTGATTTCACTGGTGATGCAAGTGACTTCAGAAGGGCTGGTGACGGTCTTCTTAAAGTGTGGGTGAGAAGGATCATCAGTGACAGTAGTG | |||||||||
gi|88996213|gb|CI037504.1|CI037504 CI037504 Oryza sativa (japonica cultivar-group) etiolated shoot Oryza sativa Japonica Group c CCGTCACTGATGACTCATCT EST sequence (targeted fragment marked with yellow): TTTAACAAAGAATCAAATCATAATTAATGAGCTGATGAATTACATATAACAAAAAATATATTACATATAAATAACAATATGAGCCGGACTCTACCAGAGAAAATACTCAAAGCAATCAATATATACGAACACAATCAATCGATCGCCTTCGAAGAGATACACAAAGTATCTTCTTACTCTAATTTAGAAGGCCATGAGACCAACAACTATGGCACCCAAACTAAGACCAACTAGAGATGCAACACCAGCGGGCTGGCTTGCTGAGTTAGATGGAGGCACGGGCCGGCCACCAGCCGTTGGCGGCATTGCGTTCGGTGCCATTGCTGTCGGTGTGCGTGGACGAGGGGTCATCGGTGATGGGGCCGGGTTGCTGCCGGTGGCGGCCTCAACCTTGACAGCGACCTTCATCCCTCCGGTGCAATGGCCATTGAAGCCACATATGAAGTAGCGGGTGCCGGTAGCGGTGAGAGGGATGGTGTCATCGCCGGAGTTGAAGGTGGCGATAGGGCTGGAGCTGGAGCATGA | |||||||||
gi|86892693|gb|CI312063.1|CI312063 CI312063 Oryza sativa (japonica cultivar-group) shoot Oryza sativa Japonica Group cDNA clone CCGTCACTGATGACTCATCT EST sequence (targeted fragment marked with yellow): GCAGTGGGCATGGCTAGCAAAGGCCTGAGGCTAGCCAAAAAGACAAATTTTATTTTTTTTGGTTCTAAACTCATCCCTGACGGGCATTTAGCTAATGCCCGAAAGAGATAACTCATCCGTGACGGGCTATAGAGTCCTGCCCGTTAGAGATTAGTCATCCGTGACGGGCTTTTAGAATACACCCGATAGAGATAAGTCGTCCGAATTGGACTAGTTTGACTCAACACGTGGGGTCAAACCTATCGGTGACGGGCTCTGGCTAAATGCCCGATGGAGATGACTACTCATCCGTGACGGGCTTAGTGGTGTGCCCGATTGAGATTAGTCATCCGTGACGGACTCCTAACTACGCTGGTTTGACTGATCATACTCATCTGTGACGGGCTTTGTTTTTGGCCCGATTGAGATAACATCCATCCATGACGGGCTTTTGCCCGATTGAGATTTTTCCTCACATCAGTGACCTTTGCCCAGTGACGGGGGCCTTACCCGACAATGATGATGCTTTCAGCCCGTCATAGATAAAGCGATCCCGTTCTAGTGGGTAGCACCAGGTAGATGCGATCTTCGACGACTCCCGGTGATCTTCGGGCACACTCCGGCTGGGGTAGCCATCACGATGGCCTTCT | |||||||||
gi|88227233|gb|CI228346.1|CI228346 CI228346 Oryza sativa (japonica cultivar-group) mixed callus (Normalized Library) and mixed s CCGTCACTGATGACTCATCT EST sequence (targeted fragment marked with yellow): TTTTTTTTTTTTCTGAAATTTACTCTTTGTAGTATGAATTCTGGCCATAAAATTGAAATGGATTGTCAACCTCTGAATCAGTGCATCAGGCTGTTTCTAGCTAGTTCTGTGTGATGTTGATCAACCTCGACGACGAATCATGTAAAGCAAATTCTTCAGAATTTAGGATATACAGCATTGTCTATTCTTTATAAGATCCGACAGGTTCAACAAGACAAAGGCAGCGTTTTTCCCTTGGCTGCTTGCTTGCTGCTGCTGCTGCTGCTGCTGCTAATCATCCGTCGTAAGCCTCTGCATGATCATCTCCACAACGGCAGGAGCATCAACGGTCACAGCAACCTTCACGGTTGGCTTACCGGTCCACGCAGTTATCTCCCCATACCTTTTCTTGGTTGTGTCGAAAACTGTGAGACCCTTTGTGATGCCATCAGTCTGCACCCTCACTACACCTTCCGTGTAAGTCATCAGTGACGGATCTACCGCAG | |||||||||
gi|86504674|gb|CI147307.1|CI147307 CI147307 Oryza sativa (japonica cultivar-group) mixed shoot (Normalized Library) Oryza sativa CCGTCACTGATGACTCATCT EST sequence (targeted fragment marked with yellow): GGTGGCAATGTGAATCAATAGAAATGTTTGGAGACTTGGTATTAATTTGGTACATGATACAATAGTTTCCCTAGATATTATCTAATCAGAGTGCACAGCTGCGGACAGCATGTCAAAAATGCAATATTGCCTGACAAAATGCAGCATGTCCAAAGAAGTCTTGGAAAAGGTACGTAATATTTGGCACTAGAAAATTATGAGGGCCCCTTATTCAAGAATTGAATGCTTTTGGGCCAAATGAGTACGGTGATAATGTAGTGCAAAGGAGGCGACCGCATGTCAGCTATAAGAAGACGGGAAAAATATCAAACAGTCTACTGTGCCTGAAGGAAAATTTCATGACACGGTGTCAGGTTGATTTCACTGCTGATGCAAGTGACTTCAGAAGGGCTGGTGACGGTCTTCTTAAAGTGTGGGTGAGAAGGATCATCAGTGACAGTAGTGTCAATG | |||||||||
gi|86870315|gb|CI319421.1|CI319421 CI319421 Oryza sativa (japonica cultivar-group) shoot Oryza sativa Japonica Group cDNA clone CCGTCACTGATGACTCATCT EST sequence (targeted fragment marked with yellow): GGCCATAAAATTGAAATGGATTGTCAACCTCTGAATCAGTGCATCAGGCTGTTTCTAGCTAGTTCTGTGTGATGTTGATCAACCTCGACGACGAATCATGTAAAGCAAATTCTTCAGAATTTAGGATATACAGCATTGTCTATTCTTTATAAGATCCGACAGGTTCAACAAGACAAAGGCAGCGTTTTTCCCTTGGCTGCTTGCTTGCTGCTGCTGCTGCTGCTGCTGCTAATCATCCGTCGTAAGCCTCTGCATGATCATCTCCACAACGGGCAGGAGCATCAACGGTCACAGCAACCTTCACGGTTGGCTTACCGGTCCACGCAGTTATCTCCCCATACCTTTTCTTGGTTGTGTCGAAAACTGTGAGACCCTTTGTGATGCCATCAGTCTGCACCCTCACTACACCTTCCGTGTAAGTCATCAGTGACGGATCTACCGGAGCAATAAGTGTTGCTGGATCGTGAAGATACACTCC | |||||||||
gi|86496337|gb|CI138970.1|CI138970 CI138970 Oryza sativa (japonica cultivar-group) mixed callus (Normalized Library) Oryza sativ CCGTCACTGATGACTCATCT EST sequence (targeted fragment marked with yellow): TTTAATAGAAATGTTTGGAGACTTGGTATTAATTTGGTACATGATACAATAGTTTCCCTAGATATTATCTAATCAGAGTGCACAGCTGCGGACAGCATGTCAAAAATGCAATATTGCCTGACAAAATGCAGCATGTCCAAAGAAGTCTTGGAAAAGGTACGTAATATTTGGCACTAGAAAATTATGAGGGCCCCTTATTCAAGAATTGAATGCTTTTGGGCCAAATGAGTACGGTGATAATGTAGTGCAAAGGAGGCGACCGCATGTCAGCTATAAGAAGACGGGAAAAATATCAAACAGTCTACTGTGCCTGAAGGAAAATTTCATGACACGGTGTCAGGTTGATTTCACTGCTGATGCAAGTGACTTCAGAAGGGCTGGTGACGGTCTTCTTAAAGTGTGGGTGAGAAGGATCATCAGTGACAGTAGTATCAATGCCCCAGCTTGATGAGCTGAGCCCAAGGAAGTAGGAACATACATCAAAAGTGTAGATATTCCCA | |||||||||
gi|86892693|gb|CI312063.1|CI312063 CI312063 Oryza sativa (japonica cultivar-group) shoot Oryza sativa Japonica Group cDNA clone CCGTCACTGATGACTCATCT EST sequence (targeted fragment marked with yellow): GCAGTGGGCATGGCTAGCAAAGGCCTGAGGCTAGCCAAAAAGACAAATTTTATTTTTTTTGGTTCTAAACTCATCCCTGACGGGCATTTAGCTAATGCCCGAAAGAGATAACTCATCCGTGACGGGCTATAGAGTCCTGCCCGTTAGAGATTAGTCATCCGTGACGGGCTTTTAGAATACACCCGATAGAGATAAGTCGTCCGAATTGGACTAGTTTGACTCAACACGTGGGGTCAAACCTATCGGTGACGGGCTCTGGCTAAATGCCCGATGGAGATGACTACTCATCCGTGACGGGCTTAGTGGTGTGCCCGATTGAGATTAGTCATCCGTGACGGACTCCTAACTACGCTGGTTTGACTGATCATACTCATCTGTGACGGGCTTTGTTTTTGGCCCGATTGAGATAACATCCATCCATGACGGGCTTTTGCCCGATTGAGATTTTTCCTCACATCAGTGACCTTTGCCCAGTGACGGGGGCCTTACCCGACAATGATGATGCTTTCAGCCCGTCATAGATAAAGCGATCCCGTTCTAGTGGGTAGCACCAGGTAGATGCGATCTTCGACGACTCCCGGTGATCTTCGGGCACACTCCGGCTGGGGTAGCCATCACGATGGCCTTCT | |||||||||
gi|88831736|gb|CI369418.1|CI369418 CI369418 Oryza sativa (japonica cultivar-group) callus Oryza sativa Japonica Group cDNA clone CCGTCACTGATGACTCATCT EST sequence (targeted fragment marked with yellow): GGTATGAATTCTGGCCATAAAATTGAAATGGATTGTCAACCTCTGAATCAGTGCATCAGGCTGTTTCTAGCTAGTTCTGTGTGATGTTGATCAACCTCGACGACGAATCATGTAAAGCAAATTCTTCAGAATTTAGGATATACAGCATTGTCTATTCTTTATAAGATCCGACAGGTTCAACAAGACAAAGGCAGCGTTTTTCCCTTGGCTGCTTGCTTGCTGCTGCTGCTGCTGCTGCTGCTAATCATCCGTCGTAAGCCTCTGCATGATCATCTCCACAACGGCAGGAGCATCAACGGTCACAGCAACCTTCACGGTTGGCTTACCGGTCCACGCAGTTATCTCCCCATACCTTTTCTTGGTTGTGTCGAAAACTGTGAGACCCTTTGTGATGCCATCAGTCTGCACCCTCACTACACCTTCCGTGTAAGTCATCAGTGACGGATCTACCGCAGCAA | |||||||||
gi|89188593|gb|CI115842.1|CI115842 CI115842 Oryza sativa (japonica cultivar-group) supermix Oryza sativa Japonica Group cDNA clo CCGTCACTGATGACTCATCT EST sequence (targeted fragment marked with yellow): TTTTTTTTTTTTTTTTTTTGGTTGATCAACCTCGACGACGAATCATGTAAAGCAAATTCTTCAGAATTTAAGATATACAGCATGTCTATTCTTTATAAGATCCGACAGGTTCAACAAGACAAAGGCAGCGTTTTTCCCTTGGCTGCTTGCTTGCTGCTGCTGCTGCTGCTGCTGCTAATCATCCGTCGTAAGCCTCTGCATGATCATCTCCACAACGGCAGGAGCATCAACGGTCACAGCAACCTTCACGGTTGGCTTACCGGTCCACGCAGTTATCTCCCCATACCTTTTCTTGGTTGTGTCGAAAACTGTGAGACCCTTTGTGATGCCATCAGTCTGCACCCTCACTACACCTTCCGTGTAAGTCATCAGTGACGGATCTACCGCAGCAATAAGTGTTGCTGGATCGTGAAGATACACTCCTGTAATTTTCGACACACAATGTCTGTCACTAATATTCTGCTTTGGAGAATTGCTTGGTGTCTGATCCGTCCCCTCTTCACGTAAGTCTTTACAGACTGTGCAACCT | |||||||||
gi|86478156|gb|CI120789.1|CI120789 CI120789 Oryza sativa (japonica cultivar-group) supermix Oryza sativa Japonica Group cDNA clo CCGTCACTGATGACTCATCT EST sequence (targeted fragment marked with yellow): TTTGACTCATAAAATGAATTATTATACTGCACTTAATTATTTTGCTATAGTCAACTTACAAATATAAACATTTCATATGAAAAATGGAAAAATAGTCATCGGTGACGGGCTTTAGTTAATGCCCGATAGAGATTAAGTATATAGCCCGTCACTGATGAGTCATCTCAAACGGGCCTAAAATTGGTGCCCGTCACAGATGGACCCGTTTGAGATATGGAATGTTATCTTAATCGGGCCTAAACTACGGCCCGTCACTGATAGGTGTCATCCGTGATGGGCTTAAGTTTTATGCCCATCTAACATGTCTGTGCGACCATATCTCAATCGGGCACTTTTCGGCCCGATTGAGATGACTTCCTTGTGACGGCCCGCTATTTCTAAGCATATTAGAGCCCGTCACAGATAGAAGGATCTGTACTAGTGGTGCCCTTCCACCGCCGCTGGCACCGCAGTCCACCGCTGTGACCGCCGGAGCCGAGGTCTTCCCCATCCGCCGCCGCTGCAGTCAAGCGCAGACCCCGACGGAGCCGAGGTCTTCCACATCCGCCGCAGTCCAGCGCTGCCCCCTGATAGAGCCGAGGTCATCCCCAGCCGCCACCGCACTCCAAAAAAGGTGATTTTTCACGTGCAAAGCACGTCAATATATATTGAGTGAAGTACATTTTTTTTGATAACTGGCAAATTGAATCACCTT | |||||||||
gi|88721095|gb|CI744394.1|CI744394 CI744394 Oryza sativa (japonica cultivar-group) library (Kikuchi S) Oryza sativa Japonica Gro CCGTCACTGATGACTCATCT EST sequence (targeted fragment marked with yellow): AGTAGTCATCTGTGACGGGCTCTAGTTTAGGCCCGATTGAGGTCAGTAGTAAGTTTAGGCCCGATTGAGATGTGTATCATCTGTGACGGGCTCTAGTTTAGGCCCGATAAAGGTTAGTAGTCATCTGTGACGGGCGCTAGTTGTGGCCTGATAGAGATAGGTCATCTGTGACGGGCTATAGTTTGACTGGTCGTCTGGGTCAAAGCTATCTGTGACGGGCTTTACTTAGGACCCGATTGAGATATATTCATTCGTGACGGCCGTTTGCCCGATTGAGATAACTCTTCACATCAGCGACTTCTAGCCTGTGACGGACGCTGTGCCAGATTGAGATGGGGCTTACCGCCCGATTGAGAT | |||||||||
gi|88487229|gb|CI424500.1|CI424500 CI424500 Oryza sativa (japonica cultivar-group) callus suspension-cultured cells treated with CCGTCACTGATGACTCATCT EST sequence (targeted fragment marked with yellow): ATGGGCCAAAACACATATATAACAATAGAATCAAATCATAATTAATGAGCTGATGAATTACATATAACAAAAAATATATTACATATAAATAACAATATGAGCCGGACTCTACCAGAGAAAATACTCAAAGCAATCAATATATACGAACACAATCAATCGATCGGCTTCGAAGAGATACACAAAGTATCTTCTTACTCTAATTTAGAAGGCCATGAGACCAACAACTATGGCACCCAAACTAAGACCAACTAGAGATGCAACACCAGCGGGCTGGCTTGCTGAGTTAGATGGAGGCACGGGCCGGCCACCAGCCGTTGGCGGCATTGCGTTCGGTGCCATCGCCGTCGGTGTGCGTGGACGAGGGGTCATCGGTGATGGGGCCGGGTTGCCGCCGGTGGCGGCCTCAACCTTGACAGCGACCTTCATCCC | |||||||||
gi|86870128|gb|CI318044.1|CI318044 CI318044 Oryza sativa (japonica cultivar-group) shoot Oryza sativa Japonica Group cDNA clone CCGTCACTGATGACTCATCT EST sequence (targeted fragment marked with yellow): AGTATGAATTCTGGCCATAAAATTGAAATGGATTGTCAACCTCTGAATCAGTGCATCAGGCTGTTTCTAGCTAGTTCTGTGTGATGTTGATCAACCTCGACGACGAATCATGTAAAGCAAATTCTTCAGAATTTAGGATATACAGCATTGTCTATTCTTTATAAGATCCGACAGGTTCAACAAGACAAAGGCAGCGTTTTTCCCTTGGCTGCTTGCTTGCTGCCTGCTGCTGCTGCTGCCTGGTAATCATCCGTCGTAAGCCTCTGCATGATCATCTCCACAACGGCAGGAGCATCAACGGTCACAGCAACCTTCACGGTTGGCTTACCGGTCCACGCAGTTATTTCCCCATACTTTTCTTGGTTGTGTCGAAAACTGTGAGACCCTTTGTGATGCCATCAGTCTGCACCCTCACTACACTTCCGTGTAAGTCATCAGTGACGGATCTACCGCAGCAATAAGTGTTGCTGGATCGTGAAGATACACTCCTTTTATGAAG | |||||||||
gi|88467522|gb|CI537164.1|CI537164 CI537164 Oryza sativa (japonica cultivar-group) library (Kikuchi S) Oryza sativa Japonica Gro CCGTCACTGATGACTCATCT EST sequence (targeted fragment marked with yellow): GGCACTAGAAAATTATGAGGGCCCCTTATTCAAGAATTGAATGCTTTTGGGCCAAATGAGTACGGTGATAATGTAGTGCAAAGGAGGCGACCGCATGTCAGCTATAAGAAGACGGGAAAAATATCAAACAGTCTACTGTGCCTGAAGGAAAATTTCATGACACGGTGTCAGGTTGATTTCACTGCTGATGCAAGTGACTTCAGAAGGGCTGGTGACGGTCTTCTTAAAGTGTGGGTGAGAAGGATCATCAGTGACAGTAGTGTCAATGCCCCACCTTGATGAGCTGAGCCCAAGGAAGTAGGAANATACATCAAAAGTGTAGATATTCCCAATGTAACCTGAAGGGCAGCCATTCCAAGCGTGCTTCCGATAAGAGAT | |||||||||
gi|44673150|gb|CR286584.1|CR286584 CR286584 Oryza sativa library (Han B) Oryza sativa cDNA clone y876c06p5, mRNA sequence CCGTCACTGATGACTCATCT EST sequence (targeted fragment marked with yellow): AATTCGGCATTATCGCCGGGATCCGGGGCGGCGGCGAGGCGGCGGTGGGATCTGCCCGAGAAGGCGGCCGACAGCACTCCAAGCGGCAAAGGGGTTGTAGAAATGTCCACGGATGATGAATCAGATTGTGTGGTTATATGTCCCCCAAATGGGAAAGCTGGTCATACAGAAGTTATGAGTGGCAGGCATGATGAAGATTCTTCAAGAGGGCAAGAAACCCCTTCTACTATAGACTCACATATGAATGGGAATGTCCAGGATGGAGTGCCTGCAGATCAAGATGTGCTGAAGCTGGTTGATCAGCAGAAGTCTTCTCTTCCCAGTTCACCAATAAACCATGGTATAGCTGAACAGGAAGAGTCAAACCACACTGTTCCTCAGCCATTTGCTCCTGCAACTGAAAGGGAGGATTCTGGAGCAGGAGATTGTACTCCAGTGCCTCATCCCACCAGCAACGGTGAAAAACTCTCTGATAAAAGTAGCACCTCGCTGGCAAGTATGGCGAAGAAGAGTCATCAGTGACACCCAGGAAGCCTCTGCAAGCTGACAGTACTTCCCATACGTACGAAGATGACTCATATCGGCTACTTCCACTGTAACTATAGCAAGGCTTGGCAAATTAGACAAAAAACAGTCTCGTGGGACCTCAGTCATCGGGGCGCCGGCTGGAAGAAGGGCCGTATCCGACATTGACGAAAAGCAGGCGGGACCAGGACCAGCCGGAGTGCAAAGGACGCGAAAGTTCGAAACAGACCGATGATAGAACCCAGAAGAAACAGGGCACAAGGGAACGCACGCGCAACCTCGCATCGCCTCCCGACGCAGCCACAGACAGACACATAGCAGTTG | |||||||||
gi|86871429|gb|CI324649.1|CI324649 CI324649 Oryza sativa (japonica cultivar-group) shoot Oryza sativa Japonica Group cDNA clone CCGTCACTGATGACTCATCT EST sequence (targeted fragment marked with yellow): AAAGCAAATTCTTCAAAATTTAGGATATACAGCATTGTCTATTCTTTATAAGATCCGACAGGTTCAACAAGACAAAGGCAGCGTTTTTCCCTTGGCTGGTTGCTTGCTGCTGCTGCTGCTGCTGCTGCTAATCATCCGTCGTAAGCCTCTGCATGATCATCTCCACAACGGCAGGAGCATCAACGGTCACAGCAACCTTCACGGTTGGCTTACCGGTCCACGCAGTTATCTCCCCATACCTTTTTTTGGTTGTGTCGAAAACTGTGAGACCCTTTGTGATGCCATCAGTCTGCACCCTCACTACACCTTCCGTGTAAGTCATCAGTGACGGATCTACCGCACCAATAAGTGTTGCTGGATCGTGAAGATACACTCCTTTTATGAAGTAGGCGTCCTTGTGGTAATCATAATAA | |||||||||
gi|66922550|gb|CX109398.1|CX109398 RECm2341 A normalized whole-life-cycle cDNA library of rice Oryza sativa Indica Group cDNA cl CCGTCACTGATGACTCATCT EST sequence (targeted fragment marked with yellow): CGGGTCGACCACGCGTCGCGGACGCGTGGGCGACTTCCCCCTTCTTCTCCCCTCTCCTACCTCGCCGAGATCTAGCCCTAGGGTTCGCCAACTTCACCGGCGGCGAGGAGCACGTCACCGGCGGCGAGCACAGGCGGAGGGCGAGGGGAGAGAGAGAGGGAGGAGGACATGGGGCAGCAGTCGCTGATCTACGCGTTCGTGGCCCGCGGCACGGTCATCCTGGCCGAGTACACGGAGTTCACCGGCAACTTCACCACCATCGCCTCCCAGTGCCTCATGAAGCTCCCGGCGAGCAACAACAAGTTCACCTACAACTGCGACGGCCACACGTTCAACTACCTCGTGGAGGACGGCTTCACATACTGTGTCGTAGCTGTTGAATCAGTAGGGCGGCAGATTCCCATTGCATTCTTGGATAGAGTTAAGGATGATTTCACAAAAAGATATGCTGGTGGAAAAGCTGCTACTGCTGCTGCGAACAGCCTCAACCGAGATTTTGGATCGAAACTTAAAGAACACATGCAGTACTGTGTGGATCATCCTGAAGAGATTAGCAAGCTTGCGAAAGTGAAGGCACAAGTTTCAGAAGTCAAAGGAGTTATGATGGAAAATATTGAGAAGGGTCTTGATCGTGGAGAGAAAATTGAACTGCTCGTTGAAAAGACGAGAATTTGCGTTCCNGGGCCAAATTTAGGGCGGCGCAACCGGTGGGCAAAGATGGGTGACACATAAATAAGGGTATGCTGGGAAAATTGGGCACCTATAAACCTGGCGGGCGGATAAGGGAGAAGAGATCAGGACAAAGTGTGGCAAGGGGGAGAGGAGGGGTCAATAGGGGAGGGACAACAGATCGGGTTCGAGTGCTTCTTTCATACTCTTGTTGGCGTCGTTGTTTNGAACAAAAGAACATAAATGCGAGAGAATGAGTAACAGAAATAAACGAGAGTCATCAGAGACGGAAGAAGAGAGCATATATGAAGAGAGATGAAGATGAGAAGAGGAACGAAGGATAATAATAAGCATATAAGAGAGAACGAATCAGAAGGAGCAAGTGAATAAAGAGAGAGCGGGGTG | |||||||||
gi|117250013|gb|CT855255.1|CT855255 CT855255 Oryza sativa (indica cultivar-group) cv. Guang Lu Ai 4 Oryza sativa Indica Group cD CCGTCACTGATGACTCATCT EST sequence (targeted fragment marked with yellow): GTGATAAAACTTGTCACCCATCATAGATGAGTTATCAGTGATGTGTCGTAACTACCTGACCGTCACTAATGACTCATCTCTGACGGGTTGTAACTTACGACCCGTCAGTGATGACAAAGCAAGAAATACAATTTTTGAATTTTAAACGCAACAAAAAAACCTCAAAAAATATTTTGAATTTTACTAGCCATCCTATACATGGTCACACATCACTACCTACAAATTCACAATTTTTTACGCAATATAACTTGTATGCTACACATGAGATTCGAACTGAAGACCTCAACCTCCATATAGAGCTCCCTTACCAACTCACCTACTCAACACATATTGACTACTCACCCAATGTTATCATTTTGTCTATGCTTGTCTGAATCATTTAACATATATTTAACACCTAAATGACTTCAAATGAAAATATTATCAACTAAATAGTTATAGATCTCATCGTGTTTTATAACTTTTACATAGAAAATATCTTCATCCGATGTTGTTTGAAGAATTCAAAATTTCATTTTTCAAAATATATCTCACTTTATAACATGTAAACTTTGTGAAATGAAAATATTTTCAATTATAATATTGTAGATCTGGTTGAGTTCTATGACTTTGATACGGGCATGTATCCATCCATGTCATTTGAAAAAAACTCAAAATTTTGTTTTTAAAAGTAGATCTGATCACTTGTAATGCATGTTCGGGGATGTAAATGATCTCTAATAGAAAATGTTGGTAGTTATAAAAGTGTGGATATCATCGAGAGCTACAACTTTTATATAGGACATGTCTCAATTCGAGGTTTTTTGCAAAATTTGAAAATTTGGAATTTCCACTCATCACTAAACGGGTCATAACTACCCACCCGTCAGAAAATAACGTTATCTGTGAACGGTGTTAAGTTAAAGACCCCGCAAGAAATAAGGGGTCTCTTTTTGGGAGGTTCATTATAACTACACCCGGCATAAATGACCTGGTCTTTTGGGACCAGCCCTGGGTTGGGGATTTGTACCAAACCAAATTGGGGCGGGGTTCAAAGGGGCCAGCCCTTCCCAAAGGACCCTCAAAT | |||||||||
gi|89173888|gb|CI041781.1|CI041781 CI041781 Oryza sativa (japonica cultivar-group) callus Oryza sativa Japonica Group cDNA clone CCGTCACTGATGACTCATCT EST sequence (targeted fragment marked with yellow): TTTTTTCAATAGATGTTGGAGACTTGGTATTAATTTGGTACATGATACAATAGTTTCCCTAGATATTATCTAATCAGAGTGCACAGCTGCGGACAGCATGTCAAAAATGCAATATTGCCTGACAAAATGCAGCATGTCCAAAGAAGTCTTGGAAAAGGTACGTAATATTTGGCACTAGAAAATTATGAGGGCCCCTTATTCAAGAATTGAATGCTTTTGGGCCAAATGAGTACGGTGATAATGTAGTGCAAAGGAGGCGACCGCATGTCAGCTATAAGAAGACGGGAAAAATATCAAACAGTCTACTGTGCCTGAAGGAAAATTTCATGACACGGTGTCAGGTTGATTTCACTGCTGATGCAAGTGACTTCAGAAGGGCTGGTGACGGTCTTCTTAAAGTGTGGGTGAGAAGGATCATCAGTGACAGTAGTGTCAATGCCCCAGCTTGATGAGCTGAGCCCAAGGAAGTAGGAACATACATCAAAAGTGTAGATATTCCCAATGTAACCTGAAGGGCAGGCATTCCAAGCGTGCTTCCGATAAGAGACT | |||||||||
gi|86839029|gb|CI330403.1|CI330403 CI330403 Oryza sativa (japonica cultivar-group) shoot Oryza sativa Japonica Group cDNA clone CCGTCACTGATGACTCATCT EST sequence (targeted fragment marked with yellow): CAATAGAAATGTTTGGAGACTTGGTATTAATTTGGTACATGATACAATAGTTTCCCTAGATATTATCTAATCAGAGTGCACAGCTGCGGACAGCATGTCAAAAATGCAATATTGCCTGACAAAATGCAGCATGTCCAAAGAAGTCTTGGAAAAGGTACGTAATATTTGGCACTAGAAAATTATGAGGGCCCCTTATTCAAGAATTGAATGCTTTTGGGCCAAATGAGTACGGTGATAATGTAGTGCAAAGGAGGCGACCGCATGTCAGCTATAAGAAGACGGGAAAAATATCAAACAGTCTACTGTGCCTGAAGGAAAATTTCATGACACGGTGTCAGGTTGATTTCACTGCTGATGCAAGTGACTTCAGAAGGGCTGGTGACGGTCTTCTTAAAGTGTGGGTGAGAAGGATCATCAGTGACAGTAGTGTCAATGCCCCAGCCTTGATGAGCTGAGCCCAAGGAAGTAGGA | |||||||||
gi|88202500|gb|CI200855.1|CI200855 CI200855 Oryza sativa (japonica cultivar-group) Panicles mixture of one, two, three weeks aft CCGTCACTGATGACTCATCT EST sequence (targeted fragment marked with yellow): AATCATAATTAATGAGCTGATGAATTACATATAACAAAAAATATATTACATATAAATAACAATATGAGCCGGACTCTACCAGAGAAAATACTCAAAGCAATCAATATATACGAACACAATCAATCGATCGCCTTCGAAGAGATACACAAAGTATCTTCTTACTCTAATTTAGAAGGCCATGAGACCAACAACTATGGCACCCAAACTAAGACCAACTAGAGATGCAACACCAGCGGGCTGGCTTGCTGAGTTAGATGGAGGCACGGGCCGGACACCAGCCGTTGGCGGCATTGCGTTCGGTGCCATTGCTGTCGGTGTGCGTGGACGAGGGGTCATCGGTGATGGGGCCGGGTTGCTGCCGGTGGCGGACTCAACCTTGACAGCGACCTTCATCCCTCCG | |||||||||
gi|89187501|gb|CI114461.1|CI114461 CI114461 Oryza sativa (japonica cultivar-group) Panicles two weeks after flowering Oryza sati CCGTCACTGATGACTCATCT EST sequence (targeted fragment marked with yellow): AATAGAAATGTTTGGAGACTTGGTATTAATTTGGTACATGATACAATAGTTTCCCTAGATATTATCTAATCAGAGTGCACAGCTGCGGACAGCATGTCAAAAATGCAATATTGCCTGACAAAATGCAGCATGTCCAAAGAAGTCTTGGAAAAGGTACGTAATATTTGGCACTAGAAAATTATGAGGGCCCCTTATTCAAGAATTGAATGCTTTTGGGCCAAATGAGTGCGGTGATAATGTAGTGCAAAGGAGGCGACCGCATGTCAGCTATAAGAAGACGGGAAAAATATCAAACAGTCTACTGTGCCTGAAGGAAAATTTCATGACACGGTGTCAGGTTGATTTCACTGCTGATGCAAGTGACTTCAGAAGGGCTGGTGACGGTCTTCTTAAAGTGGGGGTGAGAAGGATCATCAGTGACAGTAGTGTCAATGCCCCAGCTTGATGAGC | |||||||||