mature miRNA: CCTACTCCTCCCATTCC species: Pinus taeda database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
Predicted miRNA targets | |||||||||
gi|58027605|gb|CX714346.1|CX714346 RTPQ1_20_F07.g1_A032 Roots treated with paraquat Pinus taeda cDNA clone RTPQ1_20_F07_A032 5', CCTACTCCTCCCATTCC EST sequence (targeted fragment marked with yellow): ACGCGAGCCCTCCCCGAACCGGAGAGCTGGGAGGAGTGGGGTACGAACATCGGAAACTACTACGCCAACAAATATTCCACCCCCGATTCCGTCCCCGGGCTTCCCCAGTACAAGCGTTCTCCTGAACCCGAGACTTGGGGGCAGTGGGGTAGCAACATCGGGAACTACTACGCCAACAAGTACGGATCTCCCGATCAGGTCTCTGGTCTTCCTCGCCCTTGGCAGAACAACAAGCGCGAGCCTAAGCCCCCGACCGAGGTGAAAAAACCCACCCCCCCGGCCCCGACACAGGCCCTCCCCGCCGCCAACGACAATTCCTACGCCCTTGCGGCCAAGCGCGAACCGGAGAGCTGGGAGGAGTGGGGTACCAACATCGGAAACTACTACGCCAACCAGTATGGGTCTCCGTCCGACGTTCCTGGACTCCCTCAATTCAAGCGCGAGCCTTCTCCCCCGACCCAGGTGAAGAAACCCACTCCGACCCAGGTGAAAGTACCCAGCGCCGCCAACGACGATTCCTATGCTCTTGCGGCCAAGCGCGAACCCGAGACCTGGGAGGAGTGGGGTACCAACGTCGGAAACTACTACGCCAACCAGTACGGGTCTCCGTCCGATGTTCCTGGACTCCCTCAATACAAGCGCGAGCTCTCCAGAGCCTGAGACCTGGGAGGAGTGGGGTACCAACATTTGGGAA | |||||||||
gi|60668674|gb|DN462250.1|DN462250 EST958049 Sequencing ESTs from loblolly pine embryos Pinus taeda cDNA clone RPIIK11 5' end, m CCTACTCCTCCCATTCC EST sequence (targeted fragment marked with yellow): GATTTGACATTAAGGCTGTGATAGACATGAACGAAGGGAGTGGCCTCAAGGTGGGAGCGACTGCAACTTGGCTTAACAGTTTGAGTCACCACCATCACCACCACCATCCAAATTCCCACGTGGAGGGTGACCAATCTGGCATGATGGGTTTCTCTGCTCAGCAGCAGCACTCTCATGGATCTACAATTATAGATCACTCGGCCTCAGCGGCAGCAGCTGCAGCTGGAGGAGGAGGAGGGGGAGGAGGAGGAGGAGGTCAGGGAAGGGGTATGTTGGATCTGCACTCAGATACAGCTAATAGCAGTGAGCTTCTGGGCAGCAGCAGATCAGATGGAGATCACCCACATCATGGTCACCATGATCAGCAGCAGCAGCAGCAGGAGAATCATATGGTGTGGCAGAATTCAAGGCTCAAGGCAGATGTTCTCCAACATCCACTGTATGACCAGTTGTTGGCTGCTCATGTTGCCTGCTTGAGGATTGCAACTCCTGTGGATCAGCTTCCAAAAATAGATGCTCAGTTGGCTCAGCAGCACCATGTTGTGGCCAAGTACTCAGTCCTAGGAAGGAACCAGCTCTTGACTGGAGAGGAGAAGGAGGAGCTTGACAGGTTCCTGGCACAGTATGTGTTGCTGTTATCCTCTTTT | |||||||||
gi|67048780|gb|DR071038.1|DR071038 RTDK1_17_E10.b1_A029 Roots, dark Pinus taeda cDNA clone RTDK1_17_E10_A029 3', mRNA sequence CCTACTCCTCCCATTCC EST sequence (targeted fragment marked with yellow): CTTCTTTTGAACTCGTAAAGTTCCATTCAAAATAGAAAATGTGGCAAATGGCGTTATAGGCAAAGTCCCAGCAATGTACAAAAGAAGAGGAATTGGAATCTCCCCTTGAAAAGGATTCAAATAGCCTGGTATGTGCCAATTTGTTAGCAAACAAAATTGAGGACGGCGCACGAATAAAACTTAATGCCTTATGTCCATTTCATGGAAAGAAAGTAATGAGTGAACAATATGAACAAAAATCCCAATTAGAGTTCAAGAGTTGAGCAAACATAACAAGTCCTAAGAGGATTTTACGTGCTCCGTAATTTTTCACTTTTGTTTCTTTCATTGCCTTGTCCTCTATCCTAATTCTATTTCAGTTTTAAATCTTTCCATTGAAGCTTCATATTTTTTTCCTGAGATCCATGAGCTCCAATCAAACGATCCACGTCAGATGCTTAGGATATGTAAGCTGACACATGAGGGGCCGATGGGTCCTGAGAAACTGAATTTTCGTTGCAACAGCCTCCTGAGAGTGGACGAGATGTTAATGATGATGGAGATTGGCACGAAAGCAGAAGAGGAGAGGCAGACCCACAAGACTGCTCCTCTATTTCAGACTTCATAGGTGCAGGCGAGGCCGGGTAGGGAGCCTTGGTCATCAGCCTGTCTTTGCGTTTCTCAAGAAATCGCTGAAGGGAATGTTTTCTTGCAATCGGAAGGTCAGCTTGTAACTTACGAATCGGTTGGTGATTTGGACCGGCTGCCAAGGGTATGGGAGTAGTAGCCACCTCAGAAGCCCCGCCAGAAGTCTGA | |||||||||
gi|66972068|gb|DR048501.1|DR048501 RTBOR1_9_G06.b1_A029 Roots plus added boron Pinus taeda cDNA clone RTBOR1_9_G06_A029 3', mRNA CCTACTCCTCCCATTCC EST sequence (targeted fragment marked with yellow): GGGTTTAATAGATTCCGACAACGATCAAACGAAGTTATTACAGAAATAGCAAAATGAGATCAAAGACAAATTTCAGGGAGAGATCCAGCTCAGCACTTAGCTGCTCAACAGCGTCTACAGCTAGAGTAATATATCGATCTTCGTCATGCCGTTTCTCTCTAATATCTATTAATCTTATTAGTACGCAACGGTGCTCCAGCATTGCTTTGCAGAATCTAATATGGGGGCGGAGGAGGCGACTTGTACGAATAGTGATGTGCAGGCGGGGAGGGGTAGACTGGGGGTTTGGGATGCGGGGGAGGAAATGTAGGTACTGCTTTGGGAGGAGTAGGGCTTGCTACCTAGGCTGGGGGAGGGGGAGATTTGTATCCGTATGGGTTTTCCGGGGGGGATGGGGCAGCTTTCGGTGGTTTGGTCACAGGAGAAGGGTTATGGGGTTTATGGGGCTCGTGGGGTTCATGGGGGGGAGGAACAGGAGTTGGCCATGATTTTGGTGGGGAATGAGGAGGAAGGGGCTTGTGGACTGGTGGAGGCTTGGCATATGGAGCAGGAGTTGGTTTGGGAGG | |||||||||
gi|68256039|gb|DR388441.1|DR388441 RTHG1_28_G01.b1_A029 Roots plus added mercury Pinus taeda cDNA clone RTHG1_28_G01_A029 3', mR CCTACTCCTCCCATTCC EST sequence (targeted fragment marked with yellow): ACTCTGATAATATTTTCTCACATCATCAGATGGTTTTATTATACTCTGATAACGATCACACGAAGTTATTACAGAAATAGCAAAATGAGATCAAAGACAAATTTGAGGAAGACATCCAACTCAGCACTCAGCTGCCCAACAGCGTCTACAGCAAGAGTAATATATCGATCTTCGTCATGGCGTTTCTCTCCAATCTCTATTCATCCTATCACTACGCAACGGCGCTCCAGAATTACTTTGCAGAATCTAATATGGTGGCGGAGGAGGCGACTTGTACGAGTAGTGATGTGCAGGTGGTGAGGGGTAGACTGGTGGTTTAGGATGCGGAGGGGGAAATGTAGGTACTGCTTTGGGAGGAGTGGGACTTACTACCTAAGTTGGGGGAGGT | |||||||||
gi|66738303|gb|DR015933.1|DR015933 STRS1_6_D01.g1_A034 Shoot tip pitch canker susceptible Pinus taeda cDNA clone STRS1_6_D01_A03 CCTACTCCTCCCATTCC EST sequence (targeted fragment marked with yellow): GGGAAATTTAGGCAGTTCTTCTATCCATGGTCAAAATATGTGAAGGTGGGTGCAGTACTCCCCCCTTGTGCATACCAAGTTATGGCCCTCCATGGTTGCCTCCACTCTGAGATACAGGCGCCCTACAGTTTGAGGAAGGCTTTTGACAGTGAGCTTCCAGAGGCAAGCACGGAGGCCGCTGCCCTGGTTCGAGAATTGGGTAGGAGTATCAACCACATGCAGCAATGCAGTCTACCCAAATTGCTGCTGGAGAATGTGCACACAGCAGCACTGCGGCTGCAAAGCAAAGTTGACCAACACTCATATCTCCTGCTAGAGCCTAAGTCCAGAACTGTAATTTCTCCAGAACTCAGCCACAGCTCCGCCCTCAACAGTCCCCGATCATCATCATTCCACAAAAACGATGCAGAATCGTACTGTGAAAAGCTTTGTTCATTGCCATCTCCAAAGGAATTTGATGATCCAGATGAGGAAGAAAATGATGGAGGAGGAGGAGAAGGGGGGCTAGAAGAAACGAGAGGCAGTGAGATTGCCAGCAATTTAGCACTGGGGACCTTCGCATCTTTGCTTATGGAGTTCATCGCGAGGCTCGATCACCTGGTAGAGGCCGTGCACGAGCTTGGGGTGCTGGCAAAATTTAAATTTGAAAAATAATATCTTCGTCCTGCATCATACCAACCATGTGATAAAATAAAACATTTGGAATCCATGCATTAAGATGAGCTAATTCTCAGGTGC | |||||||||
gi|67681094|gb|DR110865.1|DR110865 RTS1_13_B12.g1_A029 Roots minus sulfur Pinus taeda cDNA clone RTS1_13_B12_A029 5', mRNA seque CCTACTCCTCCCATTCC EST sequence (targeted fragment marked with yellow): CGAGCGGGCGGAGTAGGAGACCGTAGCAGGAGAGAGGAGATCCACAACCATGGGTTTTCGTCAAAGCCCAGAAAACCAGGGCCTACTTCAAGAGGTTTCAGGTCAAATTCAAGCGCAGGAGAGAGGGTAAGACCGATTACAGGGCAAGGATCCGCCTGATTAACCAAGATAAGAACAAGTACAACACACCCAAATACCGATTGGTCGTTAGATTCAGCAACAAGGATGTGGTGGCACAGATCATTTATGCAACTCTTGCGGGAGATGTTGTTATGTCGGCTGCTTATTCTAGGGAGTTGCCTCGTTATGGACTCGAAGTAGGGCTTACAAACTATGCTGCAGCATACTGCACTGGTCTTCTGCTGGCACGTCGTGTTTTGAAAAAGCTGGAGATGGATGAAGAATATGTTGGGAATGAGGAGGCCACTGGAGAGGACTAC | |||||||||
gi|67678623|gb|DR109439.1|DR109439 RTS1_2_B07.b1_A029 Roots minus sulfur Pinus taeda cDNA clone RTS1_2_B07_A029 3', mRNA sequenc CCTACTCCTCCCATTCC EST sequence (targeted fragment marked with yellow): TCAGATGGTTTTATTATATTCTGATAACGATCACACGAAATTATTACAGAAATAGCAAAATGAGATCAAAGACAAATTTGAGGAAGACATCCAACTCAGCACTCAGCTGCTCAACAGCGTCTACAGCTAGAGTAATATATCGATCTTCGTCATGGCGTTTCTCTCTAATCTCTATTCATCCTATCAGTACGCAACGGTGCTACAGAATTGCTTTGCAGAATCTAATATGGGGGCGGAGGAGGCGACTTGTACGAGTAGTGATGTGCAGGTGGTGAGGGGTAGACTGGTGGTTTGGGATGCGGGGGAGGAAATGTAGGTACTGCTTTGGGAGGAGTAGGGCTT | |||||||||
gi|37567145|gb|CF669752.1|CF669752 RTCNT1_45_G08.g1_A029 Root control Pinus taeda cDNA clone RTCNT1_45_G08_A029 5', mRNA sequenc CCTACTCCTCCCATTCC EST sequence (targeted fragment marked with yellow): TTTCTTTTGAATCTTTGTTAACATGTCTGAAGAGAAACATCATCACCACCATCTTTTCCACCATGAGAAGCCAGAGGAAAGTCAGTTCGCCGCCTCGGAGGTTGTTTACTCTGAGACGACGTATGGTGATGAGCAGGTGACACAGACTGCAGATGTTTACGCTGTGGAGAAATTTAACTCTAGTGAATTAGAGCACGAGAAAGCACTGAAGGAGGAGAAGAAGCATAAGCGCGAGGAGCATTTGGGTGAAGTGGGAGCAGTAGCCGCTGGAGCGTTTGCACTGTACGAGAAGCACGAAGCAAAGAAGCATCCAGAGCAAGCGCACAGGCACAAGATTGAGGAGGAGATTGCTGCAACTGCTGCGGTTGGAGCAGGAGGGTTTGCCTTCCACGAGCATCACGAGAAGAAGGAGTCCAAAAAGGAAGCAGAAGAGGGTGAAGGCAAAAAACATCACCATCTCTTCTAGAAGCTCTTGACTGCAACTTCCAATGTATTTAGAATAATTTTCCTTCATGTTGATTCCTCTTTCAGCTGCCTTCGTTGCGTATGGTGTGCTGTTATGAGATACAGATCAAACTGAAGGCAACTGATCTTCCCCTCTTTGTGTTTACCTATCCAGTCGTTTTTCAACTTGTCTCTCAGATCAATATGATCGGATTGGGACCTAAAATACAAAATGTGTGTGGCGAATAATTTATGAGCTCTTGTTATCGACTTACGCATGGATCGTATGATTGCTGTTGTGCTCTCTGAAATTTTAGAGAAGGTTAGGTGGAATCTTTGTCATTATTTCTGCGAATGCCTGTCGGAAAACTTTGGACC | |||||||||
gi|66984443|gb|DR060876.1|DR060876 RTNIT1_30_C10.g1_A029 Roots minus nitrogen Pinus taeda cDNA clone RTNIT1_30_C10_A029 5', mRNA CCTACTCCTCCCATTCC EST sequence (targeted fragment marked with yellow): TTCCTGCTGTTGATCGATCGGAGCACCTGCACAGATCTCTCATGGCTAACCTTTCACGCTTCTTTGCNGCTTTACGAAGAGAATTGAGCCGTTTATCGGCTGGATCTGCGTCACGAGTTCGATTCCTGTCGAGTGATGCGAGAGGGTACCACTTGGGGAACGGCCCTTCCAGCATGCGGGCGGCCGTGTTCTGGGAACCCGGAAGGCCTCTCAGTATTGAAGACTTCCACATGCCCCGCCCCAAGGCTGGAGAAATTTTAATCAAGACCAAAGCCTGTGGGGTGTGCCATTCTGATCTTCACGTCATGAATGGTGACTTGCCTTTTGCAAGGCCTTGTGTAGTGGGCCATGAAATAACAGGAGAAGTAGTTGAGCATGGAGCGCATACTGAGTCTGGTATAATAAAGAGATTTCCCATTGTAGCTCATGTTGTAGGAGCTTTTATTATGCCTTGTGGAAACTGTTTTTACTGTGTAAAGGGGCAAGAAGATCTTTGCGAGCCATTTTTTACTTACAACCGAGCTAAAGGAACTCTCTATGATGGTGAAACTCGTCTATTTCTTCGCAGCAATGGCAAGCCTGTTTACATGTATAGCATGGGAGGACTTGCAGAGTACTGTGTTGTTCCAGCCACGGCATTAGCTGTTCTCCCATCATCATTGCCATATACAGAGTCTGCTGTTCTTGGATGTGCTGCCTTTACAGCATATGGTGCAATGAGACATGCAGCTGACCTGCGTGCTGGAGAAAGTGTCGCTGTCATTGGTATTGGTGGAGTAGGAT | |||||||||
gi|67960033|gb|DR162717.1|DR162717 RTFE1_19_F10.g1_A029 Roots minus iron Pinus taeda cDNA clone RTFE1_19_F10_A029 5', mRNA seque CCTACTCCTCCCATTCC EST sequence (targeted fragment marked with yellow): TCCTGCCATGTCATTCAGCGGCTGGGGAGGTCGCGGTGGTGGAGGAGGATTCCAACAGTCCACTCCTTTCCGTTCCACTGTCAATCAGAGAGTCACCAGCGCTCCCACTCGTGCTCCGTGCAAATTCTGGCAGCAAGGGACATGCAACAGAGGAGACCAATGCAACTTCTCACATGAGGGACCGAGAGGAGGGGCAAAACAGCAACAGCCATCATCCTCTCCATGGGGCGCAAATACTGCGACAGGCGCGGGACTGTGGGGAGGAGGAGGAGGAGGGGGAGTGACGTCTCT | |||||||||
gi|70782352|gb|DR692000.1|DR692000 EST1082087 Normalized pine embryo library, Lib_D Pinus taeda cDNA clone PWADG75 3' end, mRNA CCTACTCCTCCCATTCC EST sequence (targeted fragment marked with yellow): GTGCCTCCCGCCGTCAATCAACAGATGGAAGCCTTTACCAACGATTTGTTGCGTTCGATTTTAGCAAGGCTTCCTGTTCGGGATGTTGCCAGAATGAGGATTGTCTGCAAGCGATGGAAAGATCTGTTACCTCATGGCGATGCCCTGCAAAGAATTGTTCCAAACTTTTCAGTGAATTCAATCGCTGCGTTTCTCATTCAACTCTATTGTGGTCCCCATTATCAGGAGGCGTGGGTCATAGAATTAGCACACGGTGGTGGTTCGGATATAAACATTTACAAATTCCCTTGTCCAGAGGGCCGAATCATTGTAGATGCATGGCGGAGCATCTGCTTCTGTATGAGAAACGAAGATAGACTGGATCTTTCGATATGCAATCCTGCTACCAGAACCTGGAGACAACTCCCTCGCCCCGACCATAATGACCCAAATTGGGATTTCAGTGCAATGACTTTCGACCCCACCCTGAGGCGTTGCACTGTCTTGCTCGGTTATAATAACGTTCGTGAACGAGGTGGGAATTTAATGGTGTTGGAAATTTATGATTCAGAGTCCAATGCATGGACTAGGGTTTCCATGGAAGCACCTCGCTTCATTCAACCTCGTGGCAAGGGTCTCTATTCCAATGGAAAGTTTCACTGGATAATCCGATGGAATGCAATGTATTTCATGGTAGCATTAGATATTGCAGAGAGGAGTTGGACAGAATTACATTGCCAGAGTTTGCAGAAGTATCTGCTATTACCCTGCATCTCTTTCTTAGTGACTGCGATGGGGGGAGTGGTGTTAATACGCATGGAGA | |||||||||
gi|48930214|gb|CO159673.1|CO159673 FLD1_15_C01.b1_A029 Root flooded Pinus taeda cDNA clone FLD1_15_C01_A029 3', mRNA sequence CCTACTCCTCCCATTCC EST sequence (targeted fragment marked with yellow): CAAATGGTTTTATTAGATTCTGACAACGATCAAACGAAGTTATTACAGAAATAGCAAAATGAGATCAAAGACAAATTTCAGGCAGAGATCCAGCTCAGCACTTAGCTGCTCAACAGCGTCTACAGCTAGAGTAATATATCGATCTTCGTCATGCCGTTTCTCTCTAATATCTATTAATCTTATTAGTACGCAACGGTGCTCCAGCATTGCTTTGCAGAATCTAATATGGGGGCGGAGGAGGCGACTTGTACGAGTAGTGATGTGCAGGCGGTGAGGGGTAGACTGGTGGTTTGGGTATGCGGGGGAGGAAATGTAGGTACTGCTTTGGGAGGAGTAGGGCTTGCTACGTAGGCTGGGGGAGGTGGAGATTTGTATCCGTATGGTTTTTCCGGTGGGGATGGTGCAGCTTTCGGTGGTTTGGTCACTGGAGAAGGTTTATGGTGTTTATGGTGCTCGTGGTGTTCATGGTGGGGAGGAACAGGAGTTGGCCATGATTTTGGTGGTGAATGAGGAGGAAGGGGCTTGTGGACTGGTGGAGGCTTGGCATATGGAGCAGGAGTTGGTTTGGG | |||||||||
gi|7644858|gb|AW736994.1|AW736994 NXNV_082_H01_F Nsf Xylem Normal wood Vertical Pinus taeda cDNA clone NXNV_082_H01 5' similar t CCTACTCCTCCCATTCC EST sequence (targeted fragment marked with yellow): ATTGAATGATATGGGAGGAATAGGAGAATTGAAGCCCCTGTTGTTGCGCTGCGCAGTACAGCACTACGAATGGGGGCGACATGGGTATGCGAGCGAGGTTGCCAGGCTGTATTCGCTGATAACTGGATCCCCGATAGATGAAAACAAACCCTATGCAAAGTTATGGATGGGTACCCATGATTCANNACATTCGCTCGTTATATTACAAACAGGAANNCAAGTGCCCTTGAAAAGGTGGCTGGAGGNNNATCCTGAGGCNNTCG | |||||||||
gi|67488443|gb|DR090101.1|DR090101 RTAL1_12_E08.g1_A029 Roots plus added aluminum Pinus taeda cDNA clone RTAL1_12_E08_A029 5', m CCTACTCCTCCCATTCC EST sequence (targeted fragment marked with yellow): ATCAATCTCACTTCACATTAATATCAAATGATTGAAAGAATTTGTAATAATATCAAATAGGTCACTATACAATGTCTGAAAACCGATGGCATTATAAGTCTGCAAAGACCTCGAACATTGACACAGAATTCAAATCTAGGCTATGTTTACTAGGAATAGTAGCCTTATGAAATGGCTAGCAAAACAACTAGGATTAAGATACATTTTCAAGTTGTGGGGGGCTACTTTCCTGGGATGAGAGTTTGTTGACCCTCAAGCATTCAAATTTATTAGGAATTTTACAAGTGATGTGATATCTCAGAAATAGTTGAGTTCGAACACATGCAACTGAACCCTCTAACAGGTGCGATAATCGGTGTAATCAGGACTTTCTAACGTTCATAAAAACTCTGGGCTGGTAGGGAACCTTTTTAAATCTGCGTCGATGTAGCTTGAAATAACAAAACATTTTAATCAAAGCTAGCTCAACCATCTAAGAATTTCTCCTACGACTGCACGAACCTTATCAACCCAATATCAACCTCAAGGATTCCAAAGGGCTGGTGGTGGGGGAGGAGTTGGGAACATGGGTGGAACTG | |||||||||
gi|74155352|gb|DT626436.1|DT626436 EST1158360 Sequencing ESTs from loblolly pine embryos Pinus taeda cDNA clone PIMAA78 5' end, CCTACTCCTCCCATTCC EST sequence (targeted fragment marked with yellow): GAGGTATTTCTGCCATCAGTGTGAAACTGTAATAACACCCATTCGAGAGGAGTTGGAACTCATATGCCCTCTCTGCCATGGAGGGTTTGTTGAGGAAATGGAGGGTCACGATAACCCAGTCCACGTCAATTTGGCCGGACAAGGTGTTGGAGGAGGAACAGGAGGAGGGTTTGAGGCATGGCATGCTGCAGGAGGAGGGCATCCCCTTGTATTCGGCGGTGGCGGAGATGGAGGAGAGGAGTTGATGAACCACATAATGGAAAACCTCACCAGTTTCTTCCATCAGGGTGCGGGTGCAGGTGCAGGTGCAGGTGCAGTTGCAGGTGCGGGCGCGGGTGCAGGTGCAGTTGCAGGTGCGGGCGCGGGTGCAGCTGCAGGTGGAATTGGAAGAGGGCCACTGAGTCCAATGATGATGATGCAGGGTCGCTTGCAGAACTTGTTAGGTGGAGGCGGTGGTGGTGGCAACATACAGATCATTTTCGAAGGAGGTGGGGGAGGAGGAGGAGAAAGGCTGGCTGGTAATATCGGAGATTATTTCTGGGGACAAGGGTTGGAACAGCTGATTCAGCAGTTGGCGGAAAACGACCCAAACAGGTATGGAACCCCACCTGCCTCTAAAGCTGCTGTAGAAGCCATGCCCACCATCGTGATCACACAAGATCATCTTAATTCCGATGCCTCACAGTGCGCAGTTTGTAAGGATAATTTTGAAGAAGGTGCCAATGCTAGAGAGATGCCCTGTAAACACATGTATCATGAGGAATGTATTCTCCCATGGCTTCAGCAACACAGTACATGTCCAGTCTGTCGGTATGCAATGCCAACAGATGATTCCCAACAAGGACGCCCCACGGCAGCCCAGGCAGCACATAACCCCGGTGTTGCAAATCCCAGAGGCAATACCAATTCTGAAGGCGCTGTTGTTGGTGCAGCGCAGTGCAGCTCAGCCTGCTAACAATGTGAATGCTGCTGTGGGTGGTGGACGCAGATTCGAATTCAATTCCCATGGATCCGATTCAATCCCCAAACCACCCAACAGTCACAAGC | |||||||||
gi|37567068|gb|CF669675.1|CF669675 RTCNT1_45_H09.b1_A029 Root control Pinus taeda cDNA clone RTCNT1_45_H09_A029 3', mRNA sequenc CCTACTCCTCCCATTCC EST sequence (targeted fragment marked with yellow): CATTACAATAACAAGTGTGACCAAAAGGCTAAATGTGGTAGAGGACCTAGATAATAGGGAGAACTCAATAATTTTATGTGACCAATAGTTGGATCAAAGAATGAAGCTCTAATACCAAATGGTTGGAAAACCAATGGGAAATCATCCTCTAATCATAAAATGCCCCTCATGCAGGTTAGATGTGCATGGTCTCAATTACATGGTCAATGTCTACTACAATCTCGGGTTATGGGTCAGGCAGATAAACACACCCAATATAGATGCCATTTCATTGGATGCACTTGACATCACGAGTCCATGGAGGGTGGAGACCGAGAGACTTATCATGGAGGCGGCGTGTAAGTGGTTGGAGCAAGAGGCTGAGGAGTTGGAGGAGAAGGAAGAGCAAGAGGAAGATGCTCCACTTGTAGGAGAGACAGATTTGAAGCAAGGGGAGGATATTGAAAGTGTATCGCAGCCAATGCCACCAAATCCATAGAGATTGCCAACTAGGAGAAGAGGCAGAAGACATACCACTTCATCTTCCACCTTTTCCCCGAGACTTTCACCTTCCACCTTAGCCTTGGGCTCAGCACGTCCACCTACTGCTTCTAGAGGAACAATGACACTGGTGAACTTTACCCGTAAAAAGG | |||||||||
gi|74155973|gb|DT624646.1|DT624646 EST1158981 Sequencing ESTs from loblolly pine embryos Pinus taeda cDNA clone PIMAH55 5' end, CCTACTCCTCCCATTCC EST sequence (targeted fragment marked with yellow): AAATAAGGAAATCCGAGTAGTCATTGTATCAGTCCAGTATGGCCGCCATCCTGACGACATTACCTAGTCCTTCCTCTCTTTCACAGTCGTCCCTAATCAATTCTCTAGCTCTGTGCCCTACTCAAAACCCTCTCTCCAGAAACCTACCTGCTAATCCCCTCGGATTCAGACAAGTTGATCGCAGTTGCACGACATTTAGCTTGTCCGTAAGAAGCAGTTCTAGAATCAGTGGATCACAGTACAGATCTCCCCACAAGGTTCGAGAAGGGCATATTGTGTGTGCACTTGACGATACACAGAAATCTGGGTCGGTTTCTGAATTTCTAAAGGCGGAGGGAGAGCCGGTGCCCGCGGTTAATTCAGAGGCGGCCGGAGGAGGAGGAAATAATTTCGGAGGCAGCAGCGGCGGAGGCGGAGGAGGAGGAGGAGGAGGAAATAATTTCGGAGGCAGCAGCGGCGGAGAAGGAGAAGGAGAAGGAGGAGGAGGGAAGAAAAAAATGGCATTGGCCATGTCCCAGAAATTGACCCTTGGTTATGCTGCTCTGGTTGGAGTGGGCGGACTTATCGGCTATTTAAAAAGTGGAAGCAACAAATCACTTGTATCAGGAGGTTTGTCAGCGCTAGTGCTCTACTATGTTCATACTCAACTTCCATCAAGGCCAACATTTGCATCAGCAGTTGGAATTGGTGTTTCGGCTTTGCTTTTGATAGTAATGGGGTCTCGTTTCAAGAAATCTGGGAAGGTTTTCCCTGCCGGTGTTGTATCCCTTGTCTCTTTGATCATGACTGGTGGTTATCTTCATGGCATATTGCGCAGTTCTCATGCATAGAATAATTATGAAAGTATATGAGGTTGAAAGCCATTTTGTGCGATGAGTGTTTATAAATCACATTGTAATTTAGTTCTTCTAGATTTGGATCTCGGAAATTACTTAGTGATGATATTTTTTTGGTAACAGTGCTCCTAAAAGGATTGATTCCACAGGAATGGGATTGTGGATATATGTTTTGTG | |||||||||
gi|70770348|gb|DR681872.1|DR681872 EST1071947 Normalized pine embryo library, Lib_D Pinus taeda cDNA clone PWAA294 3' end, mRNA CCTACTCCTCCCATTCC EST sequence (targeted fragment marked with yellow): GGCAGCGGAGGAGACGAGCGGGCGGAGTAGGAGACCGTAGCAGGAGAGAGGAGATCCACAACCATGGTTTTCGTCAAAGCCCAGAAAACCAGGGCCTACTTCAAGAGGTTTCAGGTCAAATTCAAGCGCAGGAGAGAGGGGAAGACCGATTACGGGGCAAGGATCCGCCTGATTAACCAAGATAAGAACAAGTACAACACACCCAAATACCGATTGGTCGTTAGATTCAGCAACAAGGATGTGGTGGCACAGATCATTTATGCAACTCTTGCGGGAGATGTTGTTATGTCGGCTGCTTATTCTAGGGAGTTGCCTCGTTATGGACTCGAAGTAGGGCTTACAAACTATGCTGCAGCATACTGCACTGGTCTTCTGCTGGCACGTCGTGTTTTGAAAAAGCTGGAGATGGATGAAGAATATGTTGGGAATGAGGAGGCCACTGGAGAGGACTACAGTGTTGAGCCAAATGATTCAAGGAGACCATTCACAGCTTTGTTGGACGTAGGTCTTGTGAGGACCACCACTG | |||||||||
gi|58029122|gb|CX715863.1|CX715863 RTPQ1_37_D04.b1_A032 Roots treated with paraquat Pinus taeda cDNA clone RTPQ1_37_D04_A032 3', CCTACTCCTCCCATTCC EST sequence (targeted fragment marked with yellow): CTCACATCATCAGATGGTTTTATTATACTCTGATAATATTTTCTCACATCATCAGATGGTTTTATTATACTCTGATAACGATCACACGAAGTTATTACAGAAATAGCAAAATGAGATCAAAGACAAATTTGAGGAAGACATCCAACTCAGCACTCAGCTGCCCAACAGCGTCTACAGCAAGAGTAATATATCGATCTTCGTCATGGCGTTTCTCTCCAATCTCTATTCATCCTATCACTACGCAACGGCGCTCCAGAATTACTTTGCAGAATCTAATATGGTGGCGGAGGAGGCGACTTGTACGAGTAGTGATGTGCAGGTGGTGAGGGGTAGACTGGTGGTTTAGGATGCGGAGGGGGAAATGTAGGTACTGCTTTGGGAGGAGTGGGACTTACT | |||||||||
gi|66983531|gb|DR059964.1|DR059964 RTNIT1_20_G05.g1_A029 Roots minus nitrogen Pinus taeda cDNA clone RTNIT1_20_G05_A029 5', mRNA CCTACTCCTCCCATTCC EST sequence (targeted fragment marked with yellow): ATTTCCTCCAACGTCACAAGATTTTATCATACTCTCACACGGTCAAACGATTTTACTACAGAAGTAGCAAAATGACATTATTTTTTAGAACAAGGCAAAGTTCAGGTGGAGATCCAGCTCAGCACTACTGGTAAAATTATGATAGATCCATCTTCTTCATCGTGTCCCTCTAAATCTCCACTCATCTGCAAGTAAATAGACAACTTCTCAGTACTCTTTGCAGATTCTAATATGGTGGCGGAGGAGGCGACTTGTACGAGTAGTGATGTGCAGGTGGTGAGGGGTAGACTGGTGGTTTGGGATGCGGGGGAGGAAATGTAGGTACTGCTTTGGGAGGAGTAGGGCTTACTACGTAGGCTGGGGGAGGTGGAGATTTGTATCCGTATGGTTTTTCTGGTGGGCATGGTGCAGCTTTCGGTGGTTTGGTCACTGGAGAAGGTTTATGGTGTTTATGGTGCTCGTGATGTTCATGGTGGGGAGGAAGAGGAGTTGGCCGTGATTTTGGTGGTG | |||||||||
gi|66688384|gb|DR010878.1|DR010878 HEAT1_1_H09.g1_A029 Root at 37 C for 24 hr Pinus taeda cDNA clone HEAT1_1_H09_A029 5', mRNA s CCTACTCCTCCCATTCC EST sequence (targeted fragment marked with yellow): CTAGCTCTGTGCCCTACTCAGAACCCTCTCTCCAGAAGCCTACCTGCTAATCCCCTCGGATTCAGACAAGTTGATCGCAGTTGCACGACATTTAGCTTGTCGGTAAGAAGCAGTTCTAGAATCAGTGGATCACAGTACAGATCTCCCCACAAGGTTCGAGAAGGGCATATTGTGTGTGCACTTGACGATACACAGAAATCTGGGTCGGTTTCTGAATTTCTAAAGGCGGAGGGAGAGCCGGTGCCCGCGGTTAATTCAGAGGCGGCGGGAGGAGGAGGAAATAATTTCGGAGGCAGCATCGGCGGAGGCGGAGGAGGAGGAGGAGGAGGAAATAATTTCAGAGGCAGCAGCGGCGGAGAAGGAGAAGGAGAAGGAGAAGGAGGAGGAGGGAAGAAAAAAATGGCATTGGCCATGTCCCAGAAATTGACCCTTGGTTATGCTGCTCTGGTTGGAGTGGGCGGACTTATCGGCTATTTAAAAAGTGGAAGCAACGAATCACTTGTATCAGGAGGTTTGTCAGCGCTAGTGCTCTACTATGTTCATACTCAACTTCCATCAACGCCAACATTTGCATCAGCAGTTGGAATTGGTGTTTCGGCTTTGCTTGTGATAGTAATGGAGTCTCGTTTCGAGAAATCTGGGAAGGTTTTCCCTGCCGGTGTTGTATCCCTTGTCTCTTTGATCATGACTG | |||||||||
gi|67194262|gb|DR080450.1|DR080450 RTFEPL1_22_F05.g1_A029 Roots plus added iron Pinus taeda cDNA clone RTFEPL1_22_F05_A029 5', m CCTACTCCTCCCATTCC EST sequence (targeted fragment marked with yellow): TTGTTTCATTTCTATCGATTTTTTTCATTCCTACCCGATCTCAGTAGCACCCGCATAAAATCCCGATTCACTATTTTCTGATTAATTCAAGTCACAGTTGTTCGATTTTATTTGGACAAGAAACTCAATAGCAGGCAATGTCGCGGGTGTACGTGGGGAACTTGGATCCCCGGGTAACCGAGCGGGAACTGGAGGATGAGTTCAGAGTCTATGGCGTTCTGCGCAGTGTATGGGTAGCTCGTAAACCACCTGGCTTTGCATTCATTGAATTTGAGGACCGCAGGGATGCAACTGATGCTGTACGTGCTTTGAATGGCAAGAATGATTGGAGGGTTGAGCTTTCTCGAAATTCTGGAGGAGGTGGACGTGGTGGTCGGGGTCGAGGTGGGGATGACATGAGTTGTTACAAGTGTGGAGAATCTGGCCACTTTGCTCGTGAATGTAATTTACGGGTAGGACGAGGGGAGTACGGTGGTCGTGGTAGAAGTCGTAGTCCACGATATCGTCGAAGCCCAAGCTATGGGAGGAGTGGTCGTAGTCCTGTCC | |||||||||
gi|37567317|gb|CF669924.1|CF669924 RTCNT1_47_A02.b1_A029 Root control Pinus taeda cDNA clone RTCNT1_47_A02_A029 3', mRNA sequenc CCTACTCCTCCCATTCC EST sequence (targeted fragment marked with yellow): CTCACATCATCAGATGGTTTTATTATACTCTGATAACGATCACACGAAGTTATTACAGAAATAGCAAAATGAGATCAAAGACAAATTTGAGGAAGACATCCAACTCAGCACTCAGCTGCCCAACAGCGTCTACAGCAAGAGTAATATATCGATCTTCGTCATGGCGTTTCTCTCCAATCTCTATTCATCCTATCACTACGCAACGGCGCTCCAGAATTACTTTGCAGAATCTAATATGGTGGCGGAGGAGGCGACTTGTACGAGTAGTGATGTGCAGGTGGTGAGGGGTAGACTGGTGGTTTAGGATGCGGAGGGGGAAATGTAGGTACTGCTTTGGGAGGAGTGGGACTTACTACGTAAGTTGGGGGAGGGTGGAGATTTGTATCCGTATGGGTTTTCTGGTGGGGATGGTGCAGATTTCGGTGGTTTGGTCACTGGAGAAGGTTTATGGTGTTTATGGTGCTCGTGGTGTTCATGGTGCTCATGGTGGGGAGGAACAGGAGTTGGCCATGATTTTGGTGGTGAAGGAGGAGGTAGGGGCTTGTGGGACTGGTGGTGGCTTGGCATATGGAGC | |||||||||
gi|68084747|gb|DR178335.1|DR178335 RTMNUT1_11_D03.b1_A029 Roots minus micronutrients Pinus taeda cDNA clone RTMNUT1_11_D03_A029 CCTACTCCTCCCATTCC EST sequence (targeted fragment marked with yellow): TTCTTTGACTTAAAAGAGTAATTATTTTCGTGATTTATAGTTTCAGTTAACAATGGCTATTATAAATAAATATTAGCATGCGATTGAGAATATAAAACAGGGGCCCGTTGGAGAAAGTATACATCGCTTTGTTTTATTTTAGTGATTCTTTTCCTTGAGATATCCATACGGTAAACCCTTTTACCTAAATCAATAAAAGACGAAACTCTTTGGCTGCTCAATTGAACCATATATATTTCCTCACACCGTCACAAGATTTTATAATACTCTCATACCGTCAAACGATTTTATTACAGAAATAGCAAAATGACATTATTCTTGAGAACAAGGCAAAGTTCAGGTGGAGATCCAGCTCAGCACTCTCAGCTGCTGAACAACATCTACTGGTAAAAATATCATAGATCCATCTTCTTCATTGTCTCCCTCTAAGTCTCTATTCACCTTCTCAGTACTCTTTGCAGAATCTAATATGGCGGCGGAGGAGGTGACTTGTACGAGTAGTGATGTGCAGGTGGTGAGGGGTAGACTGGTGGTTTGGGATGCGGAGGGGGAAATGTAGGTACTGCCTTGGGAGGAGTAGGGCTTACTGCGTAGGTTGGGGGAGGTGGAGATTTGTATCCGTATGGTTTTTCTG | |||||||||
gi|70783372|gb|DR693020.1|DR693020 EST1083108 Normalized pine embryo library, Lib_D Pinus taeda cDNA clone PWADT25 3' end, mRNA CCTACTCCTCCCATTCC EST sequence (targeted fragment marked with yellow): GGTCTCCGACGCGGTGTAACCCTGGCGAGGGCCTTCTCTACAGCATCATTTAGCAGGGCTCAGCCTTCTGACCGCTTGGTACCAGTGGCCTTCTCCGTTGAAGGCCACTTAACTGTGTTCAGCTTGCCGTCGCCACTGTCACAATGTCATATAGGACGTCGGAGGGTTTCAACTTATGGACCAGTTTGCTCCCCTGTAGACTCGGACAACAAGCGAGGAGACACTACTATTCTTTTCGAAGGCTGCGACTACGAGCACTGGCTTATTACAATGGAATTTCCTGATCCTCAGCCCACCCGCGAGGAAAAGATTGATACGTTTATAAAAACCCTGGCGAAGGTGGTCGGAAGTGAAGAGGAAGCTAAAAAAAGGATCTATGCTTTGTCTACAACAACCTATACGGGGTTTCAGGCCCAGATATCAGAGGAACTCTCCGAAAAAATGAAGGGCCTGCCGGGCGTTGTCTGGGTGTTACCTGATTCATATATTGATCCTGTAAATAAGGAGTATGGAGGAGATAAGTACATCAATGGGGTAATTATACCAGACACTCGGGTATACAATAACAGGTCTAGTGGAAGGTACAATGACAGGCCAAGAAACCGCAATCGCAGAGATTCCATGCCCGTTGAACGAAGAGACCCAATGCCCATGGATGGGAGGGGTGGTATGCAGGGAGATAGGAGAGATT | |||||||||
gi|47579277|gb|CN784632.1|CN784632 EST783323 Sequencing ESTs from loblolly pine embryos Pinus taeda cDNA clone PIAAO48 5' end, m CCTACTCCTCCCATTCC EST sequence (targeted fragment marked with yellow): AGGAGCTACCATCGCCGGAGGAGCTGATGCCGTTGACGCAGAATCTGATCACCCCCGATCTCGCTGCGGCCTTCAAAATTCACACATCCTCTGCCTCTGCCTCTGCTCCAACGGAATCCGGGTCCGTCTTTCCGGGATCCGGTCAGCAGCAGCAACGTCCAGGGGGCGAGCCCCCGAAGAGGATCGAATTGGAGGAGGAGGAGTCATCGGTGGGAGGTGTGACAGAGAACGTGGGAGAGGAGCCAGCTCGGACGCTGAAACGGCCCCGACTGGTCTGGACCCCTCAACTCCACAAGCGATTCGTGGACGCTGTCGCCCATCTGGGCATCAAGAACGCCGTCCCCAAGACCATAATGCAGCTGATGAACGTGGAGGGCCTCACCCGCGAGAACGTAGCCAGTCATCTACAGAAATACAGGCTTTACTTGAAGCGAATGCAGGGCTTGTCGTCCGAGGGTCCCTCTGCATGTGACCAGCTCTTCGCCTCCACTCCCGTTCCACCTAGTCATTTCCTGCATAGGGACGACATGGTGGTGCCCCTCGTTCCCATGGGTATCGGTGTTCCAGGATTGAGCCACGGTCATATGGTCGCCGGGCCACCGCATTACGGGGGTTTTGATCCCAGGTTTCTTACTACTCTCTCCAGGCAGCAGCAGCAGCAGCAGCCGCCCCCTCCTCAGAGACTAGCACCTTCTGCTGCAACTCCTCGAGGCGAGTATGTCATGGTAGAAGACTTATCCTCCACAGCCACGCCCCCTCGCCAGGTTCTTACCCTGTTCCCCACTGGTGACAATTAATTATTTTATTACTTTTCCCTTTCAGCGGATCCTTACCTTAATTCCC | |||||||||
gi|34351599|gb|CF393182.1|CF393182 RTDR3_17_A03.g1_A022 Loblolly pine roots recovering from drought DR3 Pinus taeda cDNA clone R CCTACTCCTCCCATTCC EST sequence (targeted fragment marked with yellow): TAGGTATCTCGGACCAGAATCGATCCATTGCTTCAGTCTCTGATAGATTTGGCTTAATTAATGTAGGTTAGTAGCTGAACCCTGAGCTCTCCACAAGAAACTGCTTCTCTTCTCGTCTCTTCTGCAGACATCAAGTTCTTGGCACCGGACTGACTGAGCAGTGAGCATTGAAACTTGTTTGAAGAGTAAAGAGAAAAAAATTCTTGCTACATACCAACAAGGATGAGGTTATCAGGCATCCTCATAATTATTTTGGTTGTGGCTTTGGACGTGGCCGCTGGAATCTTAGGAATCCATGCATACACGGCTCAGAACCAGGTGAGGCAACTACATTTATTTGTATTTGAATGCAGAGAGCCTAGTCACGAAGCATTCAAGCTGGGAATAGCTGCTGCTTCACTCTTGTTAATTGCCCACATAATTGCCAACGTAGCTGGGGGTTGTATTTGTTATGGATCCAGGGATGACCTCAGAAATTCTCCAGTCAACAGGCAAATTGCTGGGATATCTCTCATGCTTTCATGGGTCATTTTAGGAATAGCGTTTGGATTACTGCTACTTGGAGCCAAGTACAACAACCATTCCGGGGAACACTGTTCTCTGAGTCGCCATAAGTTCTTGTGGATGGGAGGAGTACTGTGCTTTGTTCATGCTGCAATTATTGCTGCATATTATATTTCAGCCACTTCACCTATCATGCCAAATAGGGATA | |||||||||
gi|60668159|gb|DN461735.1|DN461735 EST957534 Sequencing ESTs from loblolly pine embryos Pinus taeda cDNA clone RPIID75 5' end, m CCTACTCCTCCCATTCC EST sequence (targeted fragment marked with yellow): CGGCCAAGGGGTTGCGCTGAGCAGGGTTTAGGGTTTTAGTGTTTTACGGGCAAACAATGTGATGAAAGCATTTCTAGTTACAGCGGAGCTCGTGTTTACGAAATTTTCCTGTCTTTGGGGCAAATAATCCACGACTATCCACGACTTTGACTTGATTGCTTCTTTCCAAAGGGAATTTCGTCTACCAAAGTAGCGAAAGCAGCGTCAGCGGTTCGAGCCCCCCCCACCCCGGGGAATTTAGAAGTGGGAGGAGGAGGTTCAATGGTTGATCATAAGACAGAAACATCAGCTCTGCAGAACAAAGATGATAGCGTGTTTCGATCTCTGTACTCGGACGGCAAAGAAGCTGCTGCTGTTAACACGCTTATGAATCTGGCCGAGGAGGCAAAGCTCACCAATGCGGAAGTGAATGCCCCGGGCCAAACCATTCTCAGCGTCTGCAAGTCTCTCATTGCTGGCGGTGTTGCCGGAGGAGTGTCCCGCTCTGCCGTGGCTCCTTTAGAACGGCTCAAAATTCTGCTTCAGGTTCAAAATCCTCTAAACCCTAAATACAATGGCATGGTCCAAGGATTACATCATATATGGCGTACAGAAGGAATTCGTGGATTTTTCAAAGGGAATGGTACAAATTGTGCTAGGATAGTACCCAATTCTGCTGTGAAATTTTACAGCTATGAGCAGGCATCCAGTGCAATCCTTTGGCTTTATAGAAGACAGACGGGAAATGAAAATGCCGAACATACACCTGTCTCACGTCTTGCAGCAGGAGCTTGCGCTGGAATAATTGCCATGTCTGCAACTTACCCAATGGATATGGTTCGGGGGAGGCTGACTGTCCAGACAGAGAACTCTCCTAATCAATATCGTGGTATGTTCCATGCTATGGAAACTGTCTTGCGTG | |||||||||
gi|61666490|gb|DN608990.1|DN608990 EST962040 Subtracted pine embryo library, Lib_B Pinus taeda cDNA clone PSAA705, mRNA sequence CCTACTCCTCCCATTCC EST sequence (targeted fragment marked with yellow): ACACTGCTATCTACCATGCCTCAAAGGATGAACGCCTCGCGCGCTTAAGCTGAGGGGTTGGGTAGAATTCGTGAGTATCCAGCGACCCAATGTCTGGAACAATACACGCTTCATCGAAATCGGGAACGGTTGGAATTTCTGCCTTGGATTTCCCTTTGACAGTAAAGTTGGGCCTCCCTCCTGGTCCGGTGGGACAAAGCTCCGGAACCCTGCAGGCAAGAGCTTCCTCTTGTTCTTGCTGTTGCTCGAACAGTCCCAAATGATCGAGACCATCTACCTCCCAGTCGAACTCTCCCAACCCTTCAGGATCTCCCTTTGATTCAAAGTCAGAAATTGGCAACAGTTCGTCCATGGACCAACACGGCTCTCCCAAGGGTATCGATTTGGCCGATGATGAGTGGGTCGAACCCATCCGTGGGGTGGCATGAGTAGGAGCAGTAGGGTTAGAAATAGAGGACGGCTGTTTGTCAAATTCGTTTGAGCCCGGAGATTCTGATGACTGGGCATTGAGACCTACCCTAATGCCAGTGGCCAGGAACCTTTGGTGTTTTGCTGCTAATGTGTCGCGAGAATCAACAGACTCATCGCAGTCTTGGCACAGCATAGCACGATCTTCGAGACAGAAAACGATGGCTGCCCTATCCTGGCAAATGTCGCAGCGAGAGAGCTTCGGAGAAGTTCCGAGAAGAGGCAATCTCTTGTGTTTGCTGGCAAGCTTGTTGGCCTTGTGGACTTTTATATCACACTCCCTGCATAAAGCAGCCTCGTCTGCACAACATATCACTGAAGCAGCTGCCTGCTCGCACGCACCGCACTGGATCCGCATGATAAAACGCAATCCTCTTTCCCCGCGT | |||||||||
gi|49444779|gb|CO363462.1|CO363462 RTK1_9_H03.g1_A029 Roots minus potassium Pinus taeda cDNA clone RTK1_9_H03_A029 5', mRNA sequ CCTACTCCTCCCATTCC EST sequence (targeted fragment marked with yellow): AGAGCCCGCAGCGTGAGGAGGAGGAAAGAAAGCGCAAACAGGATGCAGAATGGAGAGCCAAGCTGGATGAGATTGCTGAAAAGCAGAAGCAGCGTGAAAGGGAGCTGGAGGAGAAGGAGAGGCTACGAAAAGAAGCTTTGATCAAAGAGGAACCAAGAGTTTCAAAACCCTCAGAGCCAAGTACAAACAAATTTGTTCCCCGAGCTCTGCGCAAGGCGACCGAATCTGCTGGCACTGAAGCAGATACTGATAGGTGGCGCCGTGGAGATCGGCAAACAAATGTTGATGGCAGAGATGGCCTCCCTGCTAGACAACGTGAAACAGATGTGCCAGCTAGGGATAAGTATGCCCCTCCAACCCGTAAATATGAGCCACCTACAAGACAAACAGGGGTTAAATATGAACCTCCAGTATCTGGAAGGCGTGATAACTATGAACCACCACGTGGACGGGATGCCCAACCCCCTGTTGGGCGTTACGAGCCACGATCAAAGTTTGGTGGATTTGGTCAGAAGGATGAACGTGATCGTTGGGGAGCTGGTCCTGACCGTGAAAGGCAGCGAGATGAAGACAGATCTGGAGGGACTGATAATTGGAGACGTCCTTCAAAACCTGACTTACCACCATCTAGGCAAATTGAGGAACAGGCTGCCTAAAGGTTGCGTTATTGTCTCTCCTACTGCACTTTGGCTTACGTGGGCTAGATTTTGTGCTGGCTTGCGTGCATAGATATCATGAGATCAATTTGTCATTTAGTTGGAATTTGGTTGTGTACTTTGACTTCAAGTGACATAATGGAGATCCGTCAGTTTTTGGTTGCAGAGTATGTTG | |||||||||
gi|74165942|gb|DT635872.1|DT635872 EST1150803 Normalized pine embryo library, Lib_D Pinus taeda cDNA clone PIMGL53 3' end, mRNA CCTACTCCTCCCATTCC EST sequence (targeted fragment marked with yellow): CTGCTCACCAAAGTCTGGGTGTTACACCTATGGAAGAGGGTCGGAGAGGACGAAGCTGCGGATCTCTCTTACCATCTGTTCGGAAGGTGGTAGCAGAATTCATTGGAACGTTCTTCCTCATATTTGTAGGATGTGGATCAGTGGTGGTTGATAAGATAAGCAACGGTTCCATAACTCATCTTGGTGTGTCGCTTGTATGGGGAATGGCTGCTATGATTGTAATTTACTCCATAGGCCATATTTCTGGAGCTCATTTGAATCCTGCAGTCACGTTGGCCCTTGCAGCTGTGAAGAGATTTCCATGGGTTCAGGTTCCAGCCTACACAGTAGCTCAAGTATTTGGATCAATATCTGCTGGGTTTCTCCTACGTTTCATGGTTGGAGAAGTGGCATACATGGGAGCCACAGTTCCTTCAGGCTCAGAAATGCAGTCCTTCGCTTTTGAAATTATTACCACGTTATTGTTGGTGTTTGTGGTTTCTGCTGTTGCCACTGATACAAAAGCGGTGGGTGAAATGGGAGGATTAGCAATTGGAGCGACCATCGCAATGAATGTAGCCATATCCGGACCAATCTCAGGAGCTTCAATGAATCCAGCAAGGACAATAGGATCTGCAGTGGCTGGCAACAAATATACAAGCATTTGGATATACATGGTTGGGCCTGTAATCGGCGCGCTAATGGGTGCATGACTTATAACATGATTAGAGATAC | |||||||||
gi|67554704|gb|DR095349.1|DR095349 STRR1_20_A11.g1_A033 Stem Response Resistant Pinus taeda cDNA clone STRR1_20_A11_A033 5', mRN CCTACTCCTCCCATTCC EST sequence (targeted fragment marked with yellow): CGATAGGCCCTAATGGGAGAGGGAGGAGTTGTCAGTGATGCAAGGTGCAGGATAGCTAGGGATGCAGCAAGGCTGGTGGCCGCTCCTTTTCTGGTGAAGACATATCGTTTAGTGGACGATCCCTCAACAGACCACATCATTTCCTGGGGAGACAATAACAGCACCTTCGTTGTATGGTGCCCAAAAGAGTTTTCTGCTTCCGTGCTGCCAAGTTACTTCAACCACACCAATTTTTCAAGCTTTGTTAGGCAGCTGAATACTTATGGATTTCGAAAAATAGTTCGGGGGCGTTGCGAGTTTGCGAACGAGTTATTCAGGAAGGGCCAGAAGCATCTGCTCCCTCATATCCAGAGAAGAAAACCCTCCACATCCTCGGCGCAGATGGAATATGGTAACTTCTCATTATTCCCACCTGTTTCACCGACACGACACTCTGACATTTCTACAGCGGCCACTTCTCTTGCCGAGGAGAGTGAGACATTAAAGAAAAAAAATTCCTTGCTCTTATCAGAGATTGCCCACCTGAAGAGTATATGCAGTAGAGACATCACGCTCTTTATTCTGCAAAATAGCAGGGGTACTTCTCTGGCCGACGTGGACAGAAGTATCCACAACGTGAGTCCCTGTAGTTCCACTGAAGATGTTGCCAAGGAGAGCAGTACGAGCCCGCCAAAACTGTTTGGAGTTCCTCTCTATTAGGCGCCTTCAGAAATGTCACAGACTTTCAGAGGGCTTCCGTAATTTTAAGGTCATGTGTCCAACTCTATAGCTTCCATAGTAATGAAATGCTATTTACAGTCATAAGGTTTTCTATTTGCTCTTCCTTGTATATAACAAGACAATTTTCTTTG | |||||||||
gi|51495411|gb|CV032588.1|CV032588 RTNACL1_17_D09.b1_A029 Roots plus added NaCl Pinus taeda cDNA clone RTNACL1_17_D09_A029 3', m CCTACTCCTCCCATTCC EST sequence (targeted fragment marked with yellow): TTTTGAAGGCTGCAAGGCTGTGATCTGAAATCTTCCATTTGCAGTGGCTGTGATCTGAATCCTTCAACTGGAGGAAGAGGAGGAGGAGGAGGCAAAGAGGAGAAATTCTCTGTTGGCAAGGGATGTGGAGAAATGTCTTCCATTTTTGAAGGCTGCAATGGCTGTGATCTGAAATCTTCCGTTTGCAGTTGCTGTGATCTGAAATCATCTTCCATTTGCAGTGCCTGTGATCTGAAATCCTCTGAGGGTAGTGGCTGCAATCTGAAATCTTCAGCTTGTGGAGGCAAAGAACCAAAATCCTCTGTTGGCGAGGCATGTGGAGGGATTTCTTCCATTTCTGAAGTCTGCAGTGGCTGTGTTCTAAAATCTTCCACATGTGGTGGCTGCATCGGAATATCTTCTTCCACGGGTTGTGACTGTGATGTGGAATCTTCAGTTGGAGGCAAAGAATGGGAATCCCCTATTGGCATGAGAAGTGGAGGGATTTCTTCCATTTTCAAAGGCTGTGATTGGGAATCTTCTACTGGCAATGACTCTGACTGAAAGTCTCCTCTGTTTTGAGGTGGAGATTGTATATCTTCCTTTCTTGAAGGCATTAGATGCAACTGTGAATCCAAATTTGCATTGGGAGGCGGTTGGGAATCAAGGTTTGCATCCAATTCGGGTAGACGTGAATCATGATTTGCTTCCCATCCTGGCATTCTCTTCTCACCAACAGAAACCTCTTCTAATTGTTTACCCTGTTCACTTATTTTCTCTTTTAAAGTAGTGCTATCCTGCCCATTACAAAGTCTGTCAGGAAACATTCTCCCAGGCTTATTTTCCTCCATCGTAGT | |||||||||
gi|74161607|gb|DT631538.1|DT631538 EST1146469 Normalized pine embryo library, Lib_D Pinus taeda cDNA clone PIMF983 3' end, mRNA CCTACTCCTCCCATTCC EST sequence (targeted fragment marked with yellow): CGGCCGGGGGGCCATATAGGAGCGTACAATGGTAGCTCGCACTCTCAGACTTGTGCCAGAATTCCATATTCGATTCAATTGAATGATATGGGAGGAATAGGAGAATTGAAGCCCCTGTTGTTGCGCTGCGCAGTACAGCACTACGAATGGGGGCGACATGGGTATGCGAGCGAGGTTGCCAGGCTGTATTCGCTGATAACTGGATCCCCGATAGATGAAGACAAACCCTATGCAGAGTTATGGATGGGTACCCATGATTCAGGACATTCGCTCGTTATATTACAAACAGGAGAGCAAGTGCCCTTGAAGAGGTGGCTGGAGGAGCATCCTGAGGCGCTCGGTGATAAGGTCGTGGAGCGATGGGGAATTGATCTCCCCTTTCTTTTTAAGGTTCTTTCAGTAGGGAAAGCTTTATCTATCCAAGCACATCCAGACAAGGATCTTGCTCGGCTTTTACATGAAGCTCAGCCAAAGAACTACAAGGATTCTAATCATAAGCCTGAAATGGCTTTAGCTCTTACTGAGTTTGAGGCCTTGTGTGGGTTTGTCAGTGCACAGGAGCTTAAGGATGCCCTGCAAACTGTGCCTGAGATTGAGAATATTGTTGGAGAATCTGTAGCACAAGCACTCATGAATGCAGAGCTGCACGAGCAAATTGATGCTTATGTGAAAAATCCATTGAGGTCTGCTTTCACTCAACTCATGACTCTCAATAAAGAGGCAGTGGCAGAGGCACTGTCGAAAATAAAAAAGCGGTTGAATGAGGAGAATCAGATAAGAACTTTAACTCCAAAGGAGCAACTTGTT | |||||||||
gi|21823149|gb|BQ697833.1|BQ697833 NXPV_061_D09_F NXPV (Nsf Xylem Planings wood Vertical) Pinus taeda cDNA clone NXPV_061_D09 5' CCTACTCCTCCCATTCC EST sequence (targeted fragment marked with yellow): AGACGAGCGGGCGGAGTAGGAGACCGTAGCAGGAGAGAGGAGATCCACAACCATGGTTTTCGTCAAAGCCCAGAAAACCAGGGCCTACTTCAAGAGGTTTCAGGTCAAATTCAAGCGCAGGAGAGAGGGTAAGACCGATTACAGGGCAAGGATCCGCCTGATTAACCAAGATAAGAACAAGTACAACACACCCAAATACCGATTGGTCGTTAGATTCAGCAACAAGGATGTGGTGGCACAGATCATTTATGCAACTCTTGCGGGAGATGTTGTTATGTCGGCTGCTTATTCTAGGGAGTTGCCTCGTTATGGACTCGAAGTAGGNCTTACAAACTATGCTGCAGCATACTGCACTGGTCTTCTGCTGGCACGTCGTGTTTTGAAAAAGCTGGAGATGGATGAAGAATATGTTGGGAATGANNNNNNNACTGGAGNGNNNNACAGTGTTGAGCCNNNTGATTCAAGGAGACCATTCAGAGCNNTGTTGGACGT | |||||||||
gi|74155973|gb|DT624646.1|DT624646 EST1158981 Sequencing ESTs from loblolly pine embryos Pinus taeda cDNA clone PIMAH55 5' end, CCTACTCCTCCCATTCC EST sequence (targeted fragment marked with yellow): AAATAAGGAAATCCGAGTAGTCATTGTATCAGTCCAGTATGGCCGCCATCCTGACGACATTACCTAGTCCTTCCTCTCTTTCACAGTCGTCCCTAATCAATTCTCTAGCTCTGTGCCCTACTCAAAACCCTCTCTCCAGAAACCTACCTGCTAATCCCCTCGGATTCAGACAAGTTGATCGCAGTTGCACGACATTTAGCTTGTCCGTAAGAAGCAGTTCTAGAATCAGTGGATCACAGTACAGATCTCCCCACAAGGTTCGAGAAGGGCATATTGTGTGTGCACTTGACGATACACAGAAATCTGGGTCGGTTTCTGAATTTCTAAAGGCGGAGGGAGAGCCGGTGCCCGCGGTTAATTCAGAGGCGGCCGGAGGAGGAGGAAATAATTTCGGAGGCAGCAGCGGCGGAGGCGGAGGAGGAGGAGGAGGAGGAAATAATTTCGGAGGCAGCAGCGGCGGAGAAGGAGAAGGAGAAGGAGGAGGAGGGAAGAAAAAAATGGCATTGGCCATGTCCCAGAAATTGACCCTTGGTTATGCTGCTCTGGTTGGAGTGGGCGGACTTATCGGCTATTTAAAAAGTGGAAGCAACAAATCACTTGTATCAGGAGGTTTGTCAGCGCTAGTGCTCTACTATGTTCATACTCAACTTCCATCAAGGCCAACATTTGCATCAGCAGTTGGAATTGGTGTTTCGGCTTTGCTTTTGATAGTAATGGGGTCTCGTTTCAAGAAATCTGGGAAGGTTTTCCCTGCCGGTGTTGTATCCCTTGTCTCTTTGATCATGACTGGTGGTTATCTTCATGGCATATTGCGCAGTTCTCATGCATAGAATAATTATGAAAGTATATGAGGTTGAAAGCCATTTTGTGCGATGAGTGTTTATAAATCACATTGTAATTTAGTTCTTCTAGATTTGGATCTCGGAAATTACTTAGTGATGATATTTTTTTGGTAACAGTGCTCCTAAAAGGATTGATTCCACAGGAATGGGATTGTGGATATATGTTTTGTG | |||||||||
gi|51497098|gb|CV034263.1|CV034263 RTNACL1_39_F06.g1_A029 Roots plus added NaCl Pinus taeda cDNA clone RTNACL1_39_F06_A029 5', m CCTACTCCTCCCATTCC EST sequence (targeted fragment marked with yellow): AGAAGCGCAACAGGATGCAGAATGGAGAGCCAAGCTGGATGAGATTGCTGAAAAGCAGAAGCAGCGTGAAAGGGAGCTGGAGGAGAAGGAGAGGTTACGAAAAGAAGCTTTGATCAAAGAGGAACCAAGAGTTTCAAAACCCTCAGAGCCAAGTACAAACAAATTTGTTCCCCGAGCTCTGCGCAAGGCGACCGAATCTGCTGGCACTGAAGCAGATACTGATAGGTGGCGCCGTGGAGATCGGCAAACAAATGTTGATGGCAGAGATGGCCTCCCTGCTAGACAACGTGAAACAGATGTGCCAGCTAGGGATAAGTATGCCCCTCCAACCCGTAAATATGAGCCACCTACAAGACAAACAGGGGTTAAATATGAACCTCCAGTATCTGGAAGGCGTGATAACTATGAACCACCACGTGGACGGGATGCCCAACCCCCTGTTGGGCGTTACGAGCCACGATCAAAGTTTGGTGGATTTGGTCAGAAGGATGAACGTGATCGTTGGGGAGCTGGTCCTGACCGTGAAAGGCAGCGAGATGAAGACAGATCTGGAGGGACTGATAATTGGAGACGTCCTTCANAACCTGACTTACCACCATCTAGGCAAATTGAGGAACAGGCTGCCTAAAGGTTGCGTTATTGTCTCTCCTACTGCACTTTGGCTTACGTGGGCTAGATTTTGTGCTGGCTTGCGTGCATAGATATCATGAGATCAATTTGTCATTTAGTTGGAATTTGGTTGTGTACTTTGACTTCAAGTGACAT | |||||||||
gi|21822392|gb|BQ697076.1|BQ697076 NXPV_049_B07_F NXPV (Nsf Xylem Planings wood Vertical) Pinus taeda cDNA clone NXPV_049_B07 5' CCTACTCCTCCCATTCC EST sequence (targeted fragment marked with yellow): CAGCGGAGGAGACGAGCGGGCGGAGTAGGAGACGGTAGCAGGAGAGAGGAGATCCACAACCATGGTTTTCGTCAAAGCCCAGAAAACCAGGGCCTACTTCAAGAGGTTTCAGGTCAAATTCAAGCGCAGGAGAGAGGGGAAGACCGATTACAGGGCAAGGATCCGCCTGATTAACCAAGATAAGAACAAGTACAACACACCCAAATACCGATTGGTCGTTAGATTCAGCAACAAGGATGTGGTGGCACAGATCATTTATGCAACTCTTGCGGGAGATGTTGTTATGTCGGCTGCTTATTCTAGGGAGTTGCCTCGTTATGGACTCGAAGTNNGGCTTACAAACTATGCTGCAGCATACTGCACTGGTCTTCTGCTGGCACGTNNTGTTTTGAAAAAGCTGGAGATGGATGAAGAATATGTTGGGAATGAGNANNNNACTGGAGNNNACTACAGTGTTGAGCCAAATGATTCNNGNNGACCATTCANNG | |||||||||
gi|5903446|gb|AW042917.1|AW042917 ST27A08 Pine TriplEx shoot tip library Pinus taeda cDNA clone ST27A08, mRNA sequence CCTACTCCTCCCATTCC EST sequence (targeted fragment marked with yellow): TATGGCCGNGGGGGAAGAATCCTGAGGAAAGCGCTGAGTAGTTTTGCCATACATTTTTTTTCATTCATATAGGTTATGAGGAGAATACCGAGGAAAGGGCGGAGTAGCGAGCGGGTTTTATCTCCGGGAGTCTTTTCTCTCAAATTGATCGAGAACTCTATAGGGTTGGACGGGCTCGAAACTTTACTCCTGGTTGAGAAGTCCAGTTCTGAAGTTCTATGATAGTAATCCTGTAAGCTGGGAGCTGTCAGATTTTGCACCTCCCTCTAGACTAATCTATCACCATGGGTGCGAGAAATATTGTTTCAGATGATGAAGAGGAGTATGAAGAAGAGGAAGTTAGGGATGCTCATGATACAGAGACAGCTGGTGATGAGGAGGATGATGAAGAAGCTGAAGAGAAAGGGCAAGATGAGTATGAGAAAGATGGTTTCATAGTGGATGATGTTGAAGAGGAGGAAGAGGGAAGAAGTGAAAGAAAGCAGTGACGAAGAGATGANGAANNNAAA | |||||||||
gi|60659967|gb|DN453544.1|DN453544 EST949343 Sequencing ESTs from loblolly pine embryos Pinus taeda cDNA clone RPIFT92 5' end, m CCTACTCCTCCCATTCC EST sequence (targeted fragment marked with yellow): AGGCTGCACATAACCAACGTCCCCGCCGCGAATCGCGTGGAATAGAATAGGAGGAGGAGGCGGAGGACAGAGCCGCTTACC | |||||||||
gi|34357322|gb|CF398905.1|CF398905 RTDS3_11_H02.b1_A022 Drought-stressed loblolly pine roots DS3 Pinus taeda cDNA clone RTDS3_11 CCTACTCCTCCCATTCC EST sequence (targeted fragment marked with yellow): CACAGCAGATTAGAATGAATATTGTATAACAATGAAAGAATATATATGATAATCTTATTGCCAAAAACAAGAAGAATCATACATACAAATACATATATATATAAAACGCAAACAACCAATCGAACCCTGAAACCAAACCCTTATTAGCTATATGAAGTAAAGAAGAACAAGGAATGAATAAGAGCCATCCAACAATATAAACGATAACTATATGTTATAGACTGCTGAGACCTGAAAAATCAAGGGCTCTTCTAGTGACCAGGAGGTGGTGGGGTGAGAAATGGGAACGGCGGGACTTGGAAGTTTGGAAAGGGAGGAGAGCCTGGAAGGGTAGGTTTTGGAAATGGAGGAAAATTAAACGAAGGCAGCGGAGGAATTGTGGGGAGAGGAGGAGCGTTGGGAAGCGGAGGAATGCTGGGTAGTGGAGGAGCTTTGGGTAGAGGAGGAACACTGGGCAGCGGAGGAATACTGGGTAGTGGGGGAGCTTTGGGTAGTGGAGGAACACTAGGGAGTGGAGGAGTAGCGAGCTTAGGAAAAGGGGGGACACTGGGAAAGCTAGTTGGTGGAATACTGGGTAGCGGGGGAGCTTTGAGTAGTGGAGGAACA | |||||||||
gi|74156676|gb|DT625409.1|DT625409 EST1159684 Sequencing ESTs from loblolly pine embryos Pinus taeda cDNA clone PIMAP29 5' end, CCTACTCCTCCCATTCC EST sequence (targeted fragment marked with yellow): GACGGAGGAGCAGCAGGAGGAGTAGGAGGGGGGTGGTGCGAGGTGGGGGAAAGACGATGCGTATCAGCGGAGGAAGGTGAGGGTTTGGATGGAGAAGGTGGAGAATGTCTCGGTTTCGAATCCTTTTCTGCCGCTTGTAACTTTGCGTTGCATTAGCACACAATTCAAGTCTGGAGTTTGAATTATAAAGACCTGGGTTCAACACCAATGAAAACAATTCTTGAACCATTTTCTTGACTTCAGGACATGTCGGCACGCCAATCTTTATGCTTTCTTTAAGAGTTTCACCACAACCATGAGTCATGTCACAGGGCTTCCTCCTGCAGCACTGGAAGAGGATTCTCCTGGAGTTCTCTTGAAGAGAATTCGTGAACTGGAAGAGAGCCATGAGCACATGCGACAAGAAATGTCCAAATTGCTGGACGACACATACAGCCACCACCTCCACCGTCATCATAATAGACCCCCAGCCTTTCATTTACCTGAAAATGGGGCTCAGAGAAGTCGGCGGTTCGAATCCCCTCCGGGGGCGCAACTGCTTTCTCCTCAGAGGTCCTGTTTGGTCGCCGCCAAGAGAGCCGACTTCGATTTAAGAAGAAAAAAGGGCAGTGAAAGATCAGCTCTAGGCCAACATGAAGAGCCGGGAGGCTCTCCTTGGTGTAGAGAGGGTTCTGCTGAGAATAGAGGAGAGGCAAGCGGTTCTTCCTTCGAACGGGTGGCGGTTAAACACTATAACAAAATTTTGCAGTCAATGGGCCAACCTGTATACATTGTGAACCCTTCACGTCAAATTACGTTTTGGAATCATTCTGCTGAATTACTTTATGGGTATTCTGCCTCAGAGGCAGTAGGACAGAATATCATCCAACTTTTCATTCCTTCCAGTAACAATGATCTTTCAAACAGAGTAATAAATTATCTTACTGTGCGAGA | |||||||||
gi|61666304|gb|DN608804.1|DN608804 EST961854 Subtracted pine embryo library, Lib_B Pinus taeda cDNA clone PSAA452, mRNA sequence CCTACTCCTCCCATTCC EST sequence (targeted fragment marked with yellow): ACCAGGAGAATCCTTTCTGCCAGGGCGTGATAGATCTGCATACCCGCATTGCAAGAAGGAAAATCCAACCCCACAAAAAAAAAATACAGAGCCATCTTTGGCCATATGCTTTCAAAGTCCTGCCTGAAATATTTTATCCCATACAGGGTTTTAATAGATCTATGCTATCAAATATTTAAACTCCAACGAGCTCATATCTCCCTTTCCTCCTTGCCTATCATGGAGGTTCGAAGAATCGTATGACTGTGTCATGCGAGCAGATCTGAAGTGCATCAGCAGCAGAGCTACAAGTGCAGATAAAATAGAGATATGTAGAGAAGGCAATAGGATCCAGGTGAAGTTAAAAAAACCTGTAACAATGCCCAGCTCTCAGATAAGATGCAATCAGGAGCGACTGCATTTGTTTTTTCTCCCCTCCCAGATCCAGTGGCCTTGAAGCTACACGGCATCCCTGTAATACCTGCAGGACATAATCTCCATATTCATCTTCATAGACTATATTGCTGTGTTGCGTTGGAAAGGGAAGTGTGGTGAAGGCAAAAGGAATGGGAGGAGTAGGGAAGACTGGAGCAGAGAATTAATGAAGCAGAGTTTCTCCTTAACCTTAGTCTTACCCTATCCTTCCACACCTCAAGACTTCTAACCATAACACCTCCCTTTCTCGCAACCATCCACCTTCCCTGTTTTCACCCCGCGT | |||||||||
gi|60665867|gb|DN459443.1|DN459443 EST955242 Sequencing ESTs from loblolly pine embryos Pinus taeda cDNA clone RPIHN22 5' end, m CCTACTCCTCCCATTCC EST sequence (targeted fragment marked with yellow): CCACTACTATATGTTTTATGCGTCATGCAGACTGACGGCCGAATACGAAAGCACAAACGAGTCGCGCTTGGAAGGCAAGACGATTCCTGCTGTTGATCGATCGGAGCACCTGCACAGATCTCTCATGGCTAACCTTTCACGCTTCTTTCCAGCTTTACGAAGAGAATTGAGCCGTTTATCGGCTGGATCTGCGTCACGAGTTCGATTCCTGTCTAGTGATGCGAGAGGGTACCACTTGGGGAACGGCCCTTCCAGCATGCGGGCGGCCGTGTTCTGGGAACCCGGAAGGCCTCTCAGTATTGAAGACTTCCACATGCCCCGCCCCAAGGCTGGAGAAATTTTAATCAAGACCAAAGCCTGTGGGGTGTGCCATTCTGATCTTCACGTCATGAATGGTGACTTGCCTTTTGCAAGGCCTTGTGTAGTGGGCCATGAAATAACAGGAGAAGTAGTTGAGCATGGAGCGCATACTGAGTCTGGTATAATAAAGAGATTTCCCATTGGAGCTCATGTTGTAGGAGCTTTTATTATGCCTTGTGGAAACTGTTTTTACTGTGTAAAGGGGCAAGAAGATCTTTGCGAGCCATTTTTTACTTACAACCGAGCTAAAGGAACTCTCTATGATGGTGAAACTCGTCTATTTCTTCGCAGCAATGGCAAGCCTGTTTACATGTATAGCATGGGAGGACTTGCAGAGTACTGTGTTGTTCCAGCCACGGCATTAGCTGTTCTCCCATCATCATTGCCATATACAGAGTCTGCTGTTCTTGGATGTGCTGCCTTTACAGCATATGGTGCAATGAGACATGCAGCTGACCTGCGTGCTGGAGAAAGTGTCGCTGTCATTGGTATTGGTGGAGTAGGATCTAGTTGTTTGCAGATAGC | |||||||||
gi|74154949|gb|DT626033.1|DT626033 EST1157957 Sequencing ESTs from loblolly pine embryos Pinus taeda cDNA clone PIMA636 5' end, CCTACTCCTCCCATTCC EST sequence (targeted fragment marked with yellow): AAACCCTCAAAAATTTCAAAACCCGTGGGAGATACAGCGCGCCATCAGCAATGGAGGATGCTCGGGCATCGCCATCTTCATCATTGCAGGACACCAATATCCCTCCGCGCGATGCGTGGCAGCAGGCTTACCTCAGGGTTGCACCACAATGGCAGCAGCTGAAGAGTTCATCTCAGACGCCCTTTTTACCAATTTCTATATCAAGAGTTAACCAATTTGATGCTGGGAGGCTGGATATAGAAATGTCAGCTATGTTGAAGGATCAGCTTGTTAAGGTCTTCTCAGTAATGAAGCCAGGGTGGTTATCTCGTTATGAACCTGAGCTAGATGCTTTTCTTCAGTTCCTTATTTGGAGGTTCTCAATTTGGGTGGATAAGCCTACTCCAGGGAATGCTCTTATGAATCTGAGGTACAGGAACGAGGATGCTACTACAATGTTGAGGAAAGAGGAAGATATTTGGTGGCGAAGCTATGGTGCAAGGTCACCAAATTTGCAAAAATTGGTTATACGAATCTTGAGTCAAACATGTAGCTCTTCAGGGTGTGAGCGCAATTGGAGTGTGTTTGAGAAAATACACGCCAAAAAGCGCAACAGGTTGGAGTTCGCACGCCTCAACGATTTGGTGTATGTGCATTACAACATCCGACTTCGAGTGAGGCAAATAGAATCACCAATTGATCCATATGCCATTTCCTTAGACAATATTGATGTATTGGCTCCGTGGAGGGTGGAGTCTGAGGAGCCCATATTGGAGGAGTCACCTTCATGGTTAGAGCCAGTGGCAGATGATCCATTAGAGCAGGGGCAGCAAGAGGAGGGCTCGGAGTCAGAGGAGCAGCAGCACTTAGAGGAGGAGCAGGAGGAGGAGGACACTGTGGGAGCATCAGCATCAACACCATCTGCTATAGATATAGGAGAGCATAGCTCCA | |||||||||
gi|57885991|gb|CX651162.1|CX651162 COLD1_50_C04.g1_A029 Root cold Pinus taeda cDNA clone COLD1_50_C04_A029 5', mRNA sequence CCTACTCCTCCCATTCC |