miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse




mature miRNA: CCTCGGTCCCAAAATAAGTGA
species: Triticum monococcum
database: miRNEST
The numbers on the right side of the alignments show a score calculated for them.
When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5.

Predicted miRNA targets
gi|9659942|gb|BE493349.1|BE493349 WHE0571_F10_K19ZE Triticum monococcum vegetative apex cDNA library Triticum monococcum cDNA cl 

CCTCGGTCCCAAAATAAGTGA
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GGAGGCAGGGTTTTATTCACA

EST sequence (targeted fragment marked with yellow):
GGCACGAGAATTTGGTTTGTGTGTGGTAGCATTCCTCCTAGCTTCATAGTATGGTCTATCTAGCTTGGCTTTTACTCCCTCGGTCCCAAAATAAGTGACACTTATTTTGGGACGGAGGGAGTACTTTAATGAATCTGAAGAAGCGTTATGTTT