miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse




mature miRNA: CCTCTTCCTCTTCCTCTTCCG
species: Humulus lupulus
database: miRNEST
The numbers on the right side of the alignments show a score calculated for them.
When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5.

Predicted miRNA targets
gi|203711282|gb|GD252184.1|GD252184 HLUTR3CH_T3_043_B01_24JUL2006_013 HLUTR3CH Humulus lupulus cDNA, mRNA sequence

CCTCTTCCTCTTCCTCTTCCG
|||||| ||||||||.|||
AGAGAAGAAGAAGGAGGAGGA

EST sequence (targeted fragment marked with yellow):
GTCAACTTTTCTTCTTCTTCTTCTTCCTTTCCATTTTTCACAGATCAACGCTCGTCCCCTTCCTGCCATATCCAGGTTAGAAGAGGAGGAGGAAGAAGAAGAGAAAAGGTGGGTTGGCTTGGAGCTCGGGTTTTGATTGACGGAAACAATGTCGGGAGGAAGCTCAAGGTCCACCATTTACATAGGCAATTTGGATGAGCGGGTTAGTGAGAGGGTGTTGTATGATATTCTGATTCAAGCAGGGCGAGTACTTGATTTGTACATTCCTCGAGACAAAGAAACTGATAAGCCTAAAGGTTTTGCCTTTGCTGAATATGAAACCGAGGAAATTGCTGATTATGCTGTCAGGCTTTTCACTGGTCTGGTCACTCTCTACAACCGGACTCTCAAGTTTGCTATTTCTGGCCAAGACAAGCCGTCACTTAATATAAATCCTGGAACTACTCCCACATCAAATGTTCCTCATAAACTGAGATCTCATCCTACACCGATTAACGAAATGGAACGAATATCAAACAGATATACGTCTTACCCTGTAAATTTCTCTCAAGGTGATTGACGTTTGTAATAATTATTGAGTCATTTTTCTATCCTCTTCTTAATCAAATTGCGACTAAAATCATATTTGAAAGTTGCTAAATAATATCTTTATTT



gi|203708496|gb|GD252727.1|GD252727 HLUTR3CH_T3_049_D08_24JUL2006_058 HLUTR3CH Humulus lupulus cDNA, mRNA sequence

CCTCTTCCTCTTCCTCTTCCG
||||||| ||||| ||||| .
GGAGAAGAAGAAGAAGAAGCT

EST sequence (targeted fragment marked with yellow):
GCAAAGCTGGAAAAGAAAAAAGAAGAGAGGAGAAAAAGAAAAAGAAGAAGAAGAAGACGACTCTCTCTCTCTATCTCTCTCTCTCTACACCCACAGACTCTCTCTCTACACACACTTGTGTCTGTCTGGGTTTTCACCTCTCTCAGAGTATTATTACAGAGAACAAAAGTAGAGATAAGAGCGAACTAGAGAGAGAGAGAGGTTGTGGTTGTGGTGGTGGTGGTTGAGTGAGCGGGCGGCGGCGCGTCTTATTCTGCGCCGCCTTGGTTTCGGGAATGAGATTCTGGGAATGAATTAGTATTAGTATTAGTATTGGTATTGATATCGCTATTACTATTATTCTTCTTCTTCGCTGAGTTCGCTTCATTCCCACGGTAACTTGGTGCCTTTGATAAGGGAAGAAACAAAGATTGATTCAGATTCTGATTCCGAAACAAGGCTTTCCCATTTGGGTATTTTGCTAAAATTAATTCTGGCGGAGCTTAGAGGAACCCTAGAGTTTCTGGTTCAACCCTCGGTGTCGGTGAGTTTATTACCAGATCGATTCGATTTCAAGTCGAAGAAGAAGAAGAAGAGGAGAGGGTTTCACGAGGTTAAAATGCTTTGGGTCAAGAGGCTTTCTGGGTTTGTCTCGGCTGCAATGGTGTTGATTGTTCTATCTCCTTCGCTTCAATCGTTTCCACCGGCCGAAGCAATCCGA



gi|203707867|gb|GD250834.1|GD250834 HLUTR3CH_T3_025_H01_02APR2006_001 HLUTR3CH Humulus lupulus cDNA, mRNA sequence

CCTCTTCCTCTTCCTCTTCCG
||||||| ||||||||.|||
GGAGAAGAAGAAGGAGGAGGA

EST sequence (targeted fragment marked with yellow):
AACGGATTTTCCGAAAGTAAAAGTGTTGTCAGAGCAAGAGAAAGCCCCTAAACCTGGAAGCTGAGATGGAAGAGAAGATCCAGAAAACGGTGCGTTCCATTCTCCAACAATCCAATATGGATGACGTCACTGAGTACAAGATTCGGAAGCAGGCCTCGGACAAGCTCCACCTTGATCTCTCCAAGCCTCCATACAAGGCCTTCGTCAAGCAGGTGGTTCGGTCCTTCCTCGAAGAACAACAACAAGAGGAGGAGGAGGAGGAAGAAGAAGAGGAACAAGAACGGCAGACGGGTGATGGCGAGTACGATGACGAAGGCAATCTCATTGTTTGCAAGTTGTCAGAGAAAAGGAAGGTGACAGTTCAAGATTTTCGAGGGAAAACGTTGGTGTCTATAAGGGAATACTTTAAGAAAGATGGGAAAGAGCTTCCTACTGCTAAAGGGATCAGCTTGACAGAAGAACAATGGTCAACCTTCAAGAAAAATGTACCTGCTATAGAGAAAGCCATCAGTAAAATGGAGTCACGGATCATGTGACTGTCATCTAGCATTAAATTAATGAAGCTATCTCGAAATGTATTTCGTAGAACCTCTATCGTTCCATTGGTTGTACTCCATATCTACTTGTTGTGGCTTTGTCAATTTAATGCGTTATGTCTGTATCTTAATACAT



gi|157970412|gb|EX518690.1|EX518690 Hops-CTAB-32R_2007-06-14/Hops-CTAB-32R_A06_024_1 Humulus lupulus (L. cultivar Phoenix) Trich

CCTCTTCCTCTTCCTCTTCCG
||||||| |||||||| | |.
GGAGAAGTAGAAGGAGTAAGT

EST sequence (targeted fragment marked with yellow):
TTACGGCCGGGANACTACATGAGGNTCTCTGCCTTCTTCGTCCTCGCCATGATCGGGGGATCGATCTTCTTCTCCATTGTTCAGCATTTCTCCATACCAATCGACTCCGTCACTTGCTTTCTCTTGCTCTTCAACTTCTCCGTCGTTGGGGTTCTGTCGCTGTTCTCCGCTGGGTTTCCGATTCTCTTGAGGCAAGCGTATATGGTTTCTTTGGGGATCTTTGTGGCGACTTGGTTCACCAAATTGCCGGAGTGGACTACTTGGACTCTTCTCGTGGCTTTGGCTGTGTACGATTTGGTTGCGGTTTTGGCTCCCGGCGGTCCGCTCAAGCTTTTGGTTGAGCTAGCCTCGAGTCGAGATGAGGAGCTTCCGGCTTTGGTTTACGAGGCTCGCCCCACGGTCTCGAGAGAGGTTGAAAATCGGGGGTCCCCATTGAGGCTTTTGGCAACTGGGGTTTCCGATACAGGTTCGGTCGAGCTTCAGGCAATTTCACAGGACAATTCGAATAGAATTAGGAGCGGAGAAGAAGGTGGCAGTGGTGATAGCAATTTCACAGCCGTTGAAGTTAGGAACTTTGTGAATGAGAGAGGTGTTTTGAATGAGGAAGATGAAGAGGAGAGGTCCCCATTGGTGTTGAATTCAATTGGGAGGCATTCTACAAGCAGTGATTCGCCACTGTCCGATCAAGCCAGGGCGAATGGGGGCCGGGAAAATGTAGTGCCTGTGGAGGAGGAGATGTCTCCTCTTGTTGAGCTAATGGGATTGGGAAATGAGAGAGAAGTAACAAGAGAAGGAGTGGAGTTATCGAGCAGAGGTATTAAACTTGGTCTTGGTGACTTTATTTTCTATAGTGTTCTTGTTGGAAGAGCAGCCATGTATGATCTTATGACTGTGTATGCTTGTTACCTTGCCATTATATGTGGACTTGGCTGCACTCTCATTTTGTTNNCTGTGTACCGAAGAGCTCTGCCTGCTCTCCCCATATCCATNGCTTTGGNGNNCTTTTTTACTTCTNNCTCNNATATNNTGGNNNTTANGNNGNANNGCTACNACTGTNATGNTTNATNNCNTGATGANT



gi|203709502|gb|GD249416.1|GD249416 HLUTR3CH_T3_009_G06_27MAR2006_036 HLUTR3CH Humulus lupulus cDNA, mRNA sequence

CCTCTTCCTCTTCCTCTTCCG
||||||| ||| ||||.|||
GGAGAAGAAGACGGAGGAGGA

EST sequence (targeted fragment marked with yellow):
CAAGAGAAAGCCCCTAAAAATGGAAGCTGAGATGGAAGAGAAGATCCAGAAAACGGTGCGTTCCATTCTCCAACAATCCAATATGGATGACGTCACTGAGTACAAGATTCGGAAGCAGGCCTCCGACAAGCTCCACCTTGATCTCTCCAAGCCTCCATACAAGGCCTTCGTCAAGCAAGTCGTTCGGTCCTTCCTCGAAGAACAACAACAACAGGAGGAGGAGAAGGAGGAGGCAGAAGAAGAGGAACAAGAACGGCAGACGGGTGATGGCGAGTACGACGACGAAGGCAATCTCATTGTTTGCAAGTTGTCAGAGAAGAGGAAGGTGACAGTTCAAGATTTTCGAGGGAAAACGTTGGTGTCTATAAGGGAATACTTTAAGAAAGATGGGAAAGAGCTTCCTACTGCTAAAGGGATCAGCTTGACAGAAGAACAATGGTCAGCCTTCAAGAAAAATGTACCTGCTATAGAGAAAGCCATCAGTAAAATGGAGTCGCGGATCATGTGACTGTCATCTAGCATTAAATTAATGAAGCTATCTCGAAATGTATTTCCTAGAACCTCTACCGTTCCATTGGTTGTTCTCCATATCTACTTGTTGTGGCTTTGTCAATTTAATGCCTTGTGTCTGTATCTTAATACATGGATAGAACAACCATTGTTGACTTGAACTATTGTTATGTTTCTAACTAGCTCTTTTAACTCTACTATGCCTGTTTGGTCTCAATTGCATTCTGTT



gi|203693562|gb|GD245334.1|GD245334 HLUPLC_RP_011_A05_18OCT2005_047 HLUPLC Humulus lupulus cDNA, mRNA sequence

CCTCTTCCTCTTCCTCTTCCG
||||.|||||||| ||||| |
GGAGGAGGAGAAGAAGAAGAC

EST sequence (targeted fragment marked with yellow):
TGAGCCGTGGCACTACTGGTTAGGGCAGAAGAAGAAGAGGAGGAGGAAGACGCCATGACTGGAGAAGAATTAGCAGGCCCCCCTGGCCCTAAGCTCACTCGCCTCGTATACTTCGTTGGTGCCGCCTTCATTTGTGTGATTGGAATCAACAAGTGGCGTGATTTACAGAACAAATCCATGGTTTTACAGCAGGATCCCAAGCTTCAGCAACCACAAAAGCAGCCCTAGCTCTCCCTGAACTGAAATAATATCCAGTTTTTATTTATTTAAATTAAAGATACTGTTATTAATAAAAACAAATTGATGGTTTTGGAGCTTTGTAATGTAATTAATTTCATTCAAGGTGATGATGATGATATGACATTTTAT



gi|157972243|gb|EX520525.1|EX520525 HOPS-CTAB-40_2007-08-14_1/HOPS-CTAB-40_P17_033_1 Humulus lupulus (L. cultivar Phoenix) Trich

CCTCTTCCTCTTCCTCTTCCG
||||.|||||.|||||.||
AGAGAGGGAGAGGGAGAGGGA

EST sequence (targeted fragment marked with yellow):
ACGGCCGGGGANTAAAAAAAATCATTGATTAAAACTAATAAAACTGAGAAGAAAATCAAAACCGAAAGGAAATCGAGATCTAGCACCGCCTCTGCGATTGACCTTCGTCTCCATCTCAGATTTCAACTCTATCCCGAACCCAAAAATCAGAGTTTAAGCAGAGAAATGAAGAGAGGGAGAGGGAGAGGGAGAGAGTCAAACAAATGGTAGACACCAGAAGTCATGGAAGTCGGCGTGTCATTATTGATATCCATGCAAGCTTCCTCCCCAGCTCAGCTACAAGCGTCCGCATCTCCAACCCGTCGGCATTCCGAGATTTGTCTGCCTATCAAGACGACGACGATGTTCGCCTCCCTTAGTCAGTTGCACTACAATAAAGAAGAGCTTCCTTCTCAGCCCAAAGCCGCAAGCCTCCACCTGAGAAGAAGAAGCAGATCGAATAAGAAGTACAGTGTTTAGTTTAGGGTTTGATTTTCAAAATTGGGATTCCTTTTTAATTTAGTTCAGATTTCAATTTTTTTTTTTTTAATTAAATTTAAAATATTTTCCTTAATTTTAATTTATTTTGAAAAAATTAGAACGATGTTTTTATTTAGTTTAAATATTATTTATATATTTTTTAATTTAAAATAATTAATGAATTATGANGTGCTATTATCAC



gi|188512774|gb|FG346121.1|FG346121 EST h3g02 - [Humulus lupulus] Humulus lupulus Hermaphrodite flower cDNA Humulus lupulus cDNA

CCTCTTCCTCTTCCTCTTCCG
|||| |||||||| ||||||
GGAGTAGGAGAAGAAGAAGGA

EST sequence (targeted fragment marked with yellow):
TATGACGATGATGAAGAAGATGGTGAGGACCAAGATGAGGATGATGACGATGATGAGGAAGACGATGATGAAGAGGACGATGGTGGAGACGAGGATGAGGAAGATGTAGTGGAGGCAGAAGAAAATGAAGAGGAAGAAGAAGAGGATGAGGACGAGGAAGCACTTCAGCCACCCAAGAAAAGGAAGAAGTGAACTAGTAGTAAAGCTAGTACGCCAGCGAGAGGAGGCCCCAGTGTTTAGATTATTATATGTGACTTGTCTAATTTAATGGTCTTATTTAGCTCATGGAGGCTTTTTTAGGATGCTGTTTAATTGATGACTATTTTCATTTACATAATTCGAGAACCTTAATATTACTGTTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAA



gi|203703951|gb|GD248490.1|GD248490 HLUTR2CH_T3_015_F06_08FEB2006_038 HLUTR2CH Humulus lupulus cDNA, mRNA sequence

CCTCTTCCTCTTCCTCTTCCG
| ||||||||||| || |||.
GAAGAAGGAGAAGCAGTAGGT

EST sequence (targeted fragment marked with yellow):
CTCTCATTCGTTTTCTCCTTGACTCCGCCACCCTCTCTCTCACTCAGTCCGCTCCTGCATCATCTCCCTCACTCCGCCACCCTCTTGTACTCGTTGTCTCCTTCACTCAGTCCGTAGCACCTTCTTCTTCTTCCAATCAATCCATTGCTTCCTCCGTCAAGGCATTCACCAAAACTGAGAGGCTCAGAGCGAGAGCCACCGTCGGGTGCATCTACCGCTGATCGGAGATTATGGAAATGGGGTTCACCGACTAGTTTCAAACAGATGAGACGTGTTCTCTCAGCAACAGGCAGTGTTTTCTCGGCAGCAGAAGGAAGCTCTTTGCTGGTCTACCGCATTCATTTTGCGGTAGCTCACTGTAGGTGCTAATTTTTTTGGTCAGATTTGGCTTCAATATACCATTCAAAATAAATGGCAGGAAGTATGAGGGGTGATTCTGTGGAAGAGTTCAAGGGTCTTCGTATTACCTCCTTGGATGACGAAGAGGAAGAAGAACAAGACATTGATATTGATGAAGAAGATGAAGATGAAGATGAAGAAGAAACTGATTATGCGGTTTTGGGTTTCGTGAAAAAGCCTAAGAACCCCCATTCCCTTCTCCGCCATTTTTTCCCTTCCAAGGCTGGAGGTGTACCTGCTT



gi|203708550|gb|GD252755.1|GD252755 HLUTR3CH_T3_049_G01_24JUL2006_003 HLUTR3CH Humulus lupulus cDNA, mRNA sequence

CCTCTTCCTCTTCCTCTTCCG
| ||||||||||| ||.|||
GAAGAAGGAGAAGAAGGAGGA

EST sequence (targeted fragment marked with yellow):
GGAAGAAGAAGAGGAGGAGGAGGAAGAAGAGGAAGAAGATCAAATGGGTGAAGAAGAATTAGGAGATGGCACACAATCTGTGGAAAGTTTCTCGAGTACTCCTACTGGTGTTGAGACACCTGATGTCATTGACCTGCGTAAGCAGCAGAGAAAAGAACCGGACAGGCCGTTATATCAAGTACTTGAAGAAAAAGAGGAGAGAATTGCTCCAGGGACACTGCTCGGAACAACCCACACATATGTTGTCGGGGCCGGCACACAAGACAAATCGTCAGCTGCTGCTAAAAGAGTTGATCTACTTAGAGGCCAGAAAACAGATAAAGTGGATGTCACTCTACAACCCGAAGAATTGGAAGCTTTGGAAAATGTTTTGCCTGCCAAATATGAGGAAGCTAGAGAAGAGGAGAAGCTTCGGAGTCAGCGAGAGGATTTCAGTGACATGGTCGCAGAGAATGAGAAGAAGAGGAAGCGTAAAATGCAAGAGAAGGAAGGGAAATCGAAGAAGAAGGATTTTAAGTTCTAGAGTACTATCATCATCATCAATTTGGGAGGGACATTATTATAACCCATTTTCTATGGCCAGCCCCATTTTGCATGGGTAAAGCCCAAGAGCCCAATGTTTTCAGAGTGAGTTTTTTTTATGAGATGTATTACACTCGGTTGGGTTGGTAGTTAAAGTCAGTGTATTAAGTTTGGTCAATATAATGACTTGTAACACCTGAGCTAGTCTGTTTCTGTAGCAACTTTGGTCAAATGATATATACGAGTAAAGTATATTACTGTATCGTTTTATC



gi|203691660|gb|GD243575.1|GD243575 HLUPJN1_UP_010_B06_05DEC2003_001 HLUPJN1 Humulus lupulus cDNA, mRNA sequence

CCTCTTCCTCTTCCTCTTCCG
||||||||||||||||| |
GGAGAAGGAGAAGGAGACCTC

EST sequence (targeted fragment marked with yellow):
GATTGTGCTGATAATGGCATTCCTCTGCCTAACGTGACAAGCAAAATTCTTGCTAAGGTCATCGAGTACTGTAGGAAGCACGTTGATTCCCCCAACCCTGATGAGCGCGTCGCCGACGACGATCTTAAGTCTTGGGATGCAGAGTTCGTCAAGGTTGACCAGGCCACGCTCTTTGACCTTATTCTGTCTGCAAACTACCTTAACATCAAGAACCTGCTTGACTTGACATGCCAAACTGTGGCTGATATGATCAAAGGAAAGACTCCAGAGGAGATCAGGAAGACATTCAACATCAAGAATGATTTCACTCCAGAGGAAGAGGAAGAGGTTCGCCGGGAGAACCAGTGGGCTTTTGAATGATTATTATATATAACTAAGTGGGGACTATTATTTTGAATTGAAATGGTTGAAAATATGTTCTAGTGGGGGGCTTCTAGTTTTACGTTAGTCTTAGTTGGTTAGCTTTTCTCCTCATC



gi|203708929|gb|GD253149.1|GD253149 HLUTR3CH_T3_054_B05_24JUL2006_045 HLUTR3CH Humulus lupulus cDNA, mRNA sequence

CCTCTTCCTCTTCCTCTTCCG
||||||||||||| || || |
GGAGAAGGAGAAGAAGCAGCC

EST sequence (targeted fragment marked with yellow):
GCAATCTCCTCACTCGAACCAGTCTCTCTCTCTCTCCTAAACCCAATCCTTTCTTTCTCACTATCCACTCTTCGCCGAAATGTCACCGGCACCAGTCGTCGAGCCCACCGCCGCCGCCGAGACCCTGACCGAGGAGATCCTCTCCACCGAGAAACCCCTCAAGAGCTCTACTCAGAGCGAGGATGAAGTTATAGTTGAGGACGTTAAGGACGATAAGGACGAGGATGACGAAGATGATGACGACGATGACGAGGAGGACGACGAGGATGTGGGTCTTCCAGGCCCAGATGGGACTCCCAAGCAGAGCAGAAGTGAGAAGAAAAGTCGCAAGGCAATGTTGAAGCTCGGTATGAAGCCAGTTACAGGTGTTAGCAGGGTCACCATTAAAAGAACCAAAAATATCCTATTTTTCATCTCAAAACCTGATGTTTTCAAGAGCCCTCATTCCGAGACTTACATCATATTTGGGGAGGCAAAGATAGAGGATTTAAGCTCACAGTTGCAGACCCAAGCTGCCCAACAGTTCAGGATGCCAGACGTGAGCGCCGTGACAGCCAAAGCTGACACTTCCACTGCACCTGCTGGTGTCCCAGCCGACGAAGAAGAGGAAGAGGTTGACGAAACTGGTGTTGAGGCCAGGGACATTGATTTGGTGATGACACAAGCAGGAGTTTCAAAGACCAAGGCTGTTAAGGCTCTGAAGGCTCACGATG



gi|148795752|gb|ES654547.1|ES654547 Hops-Column40_2007-04-26/Hops-Column40_D08_029_1 Humulus lupulus (L. cultivar Phoenix) Trich

CCTCTTCCTCTTCCTCTTCCG
||||.||||||||| |.|| |
GGAGGAGGAGAAGGTGGAGCC

EST sequence (targeted fragment marked with yellow):
TTACGGCCGGGGTTTTGTTACCATGTCTTCCATGGATGAAGTTGAAGCGGNNNANNCNNCAGTTTAATGGCTATGAACTTGATGGGAGGGCATTGANAGTGAACTTTGGACCTCCTCCAGCTAGGGATGATTCATTTCCCCGAGGTGGAAGAGGAGGAGGAGGCGGCGGCGGCAATTCCGGTAACCGAATCTATGTCGGTAGCCTTCCATGGAGCGCTGACAATTCAACTCTCCATGACTTATTTAGTGAGCAAGGACAGGTTGTGGATGCCAAGGTGGTTTTTGACAGGGAGAGTGGAAGGTCTAGGGGTTTTGGTTTTGTAACCTATAACTCTGCTGATGAGGTTAACAATGCTATTGAGTCTTTGAATGGAATTGACTTGGACGGAAGACAAATCCGAGTCNCTCGTGCGGAANCCAAGCCTAGCCGNTCATTTTAAATTTTGAATCCTATATCCNGGATAA



gi|157973125|gb|EX521407.1|EX521407 HOPS-CTAB-43_2007-08-15/HOPS-CTAB-43_L22_043_1 Humulus lupulus (L. cultivar Phoenix) Trichom

CCTCTTCCTCTTCCTCTTCCG
||||||||||||| .| |||
GGAGAAGGAGAAGTGGTAGGA

EST sequence (targeted fragment marked with yellow):
ACGGCCGGGGAAGCANAGACTCCGATGCCTGTCAAGAACCATGCTGCAATGGATTGGAAGCCCACTGGCCCCGAAGCTAAGCNCCTTGACTTCCACGATATGCNGCTGGATCAAGACNTCNGCCNGTCNATTGAGCNAGGCAGCNACCCGCATGAAGTCNTTGTTATAGACGATGATGATAAGCCTGAGCCCGAAGATCCTTCGCCTGTTGCTCAAACACACTCTGCTCGCTCATCGCCAGAGTTCCAAGGCAGTGGCAGAGAGTCAGCGCCGCCCAAGGAGGTGAGCGTCGGAGCTGCGAATCCGGAAGACGATGAGGATGGTGAAGAGGAAGAGGAAGATCAACATGCNAATGCCGACGAAGCTGCGGAACCTGATGCAATCGAAGAAGCCGACGATGACATCTGGGCCGAAGAAGCCTCCCGAGATCTTGACGACTCTGTCATCTCCACCACCACGACCCGACCTCATACGTTTCCACGCTCTCGAGCTGTGGAAAAACCAGCGCCACCTACGACCATCGCCGCACCACCGGCTCCTTCGGAGAAGCCTGATCCGTCTCGGCGCGCCAGGTTGCCACGGACCTGGAGAAAGGCTGGTGGCGGTGATTCTACATTGACTGACTCATCAACGTTGTCAAACACTGGCAACGATGTTTCGAATCAGTCTCATACTATCACCAGTCATCCGGAAGCGCCTGTAGTACAGCGAACATCCGGCGACNAAGCCGAGAGTGGACGTAGCAGTGGAGTGCTCACGCCGCCTAGCACCGATGATGATGACNGCANGCGGAAGCTTGGTGTTATGGAGACNGAAGAGCGCGCTGTTGCAACGCNTCNAACCCCTGGACCGCCNGCCATCTGCGGAANTCNACGGGCNGATGGAGGAAGCGATTGACCNCNTANACNAGNNGTTGAC



gi|188512774|gb|FG346121.1|FG346121 EST h3g02 - [Humulus lupulus] Humulus lupulus Hermaphrodite flower cDNA Humulus lupulus cDNA

CCTCTTCCTCTTCCTCTTCCG
||||||| |||||||||||
GGAGAAGAAGAAGGAGAAGTA

EST sequence (targeted fragment marked with yellow):
TATGACGATGATGAAGAAGATGGTGAGGACCAAGATGAGGATGATGACGATGATGAGGAAGACGATGATGAAGAGGACGATGGTGGAGACGAGGATGAGGAAGATGTAGTGGAGGCAGAAGAAAATGAAGAGGAAGAAGAAGAGGATGAGGACGAGGAAGCACTTCAGCCACCCAAGAAAAGGAAGAAGTGAACTAGTAGTAAAGCTAGTACGCCAGCGAGAGGAGGCCCCAGTGTTTAGATTATTATATGTGACTTGTCTAATTTAATGGTCTTATTTAGCTCATGGAGGCTTTTTTAGGATGCTGTTTAATTGATGACTATTTTCATTTACATAATTCGAGAACCTTAATATTACTGTTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAA