| mature miRNA: CGACAACAACAACAAGAAGAAGAG species: Festuca arundinacea database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|74441408|gb|DT697583.1|DT697583 s13dFA53B05LF045_87879 Tall fescue, Festuca arundinacea Schreb, leaf Festuca arundinacea cDNA CGACAACAACAACAAGAAGAAGAG EST sequence (targeted fragment marked with yellow): GGCACGAGGTCCTCCTCCTCTTCTTGTTGTTGTCGTGTGGTCTTAGCGGAGCACGAAGCGGGCACCGATCGGCAGAGCAATGGCGTCGAGCGGGTTGAGGAGCTGCAGCGCGGTGGGCGTGCCCAGCCTGCTGGCCCCGTCGTCGGGGCGGTCCCGGTTCTGTGTGGCCTCCGCCACCACCACCTCCGGCCGCGTCACCATGTCCGCCGAGTGGTTCCCCGGCCAGCCACGCCCCGCCCACCTCGACGGCTCCTCGCCAGGCGACTTCGGTTTCGACCCTCTTGGCCTCGCCACCGTCCCGGAGAACTTCGAGCGGTTCAAGGAGTCGGAGATCTACCACTGCCGGTGGGCGATGCTGGCGGTGCCCGGCGTGCTCATCCCTGAGGCCCTGGGTCTGGGCAACTGGGTCAAGGCGCAGGAGTGGGCGGCCA | |||||||||
gi|257176258|gb|GT036723.1|GT036723 CLS_cLiFproots_20a4_1_l16cLibkit5LD_F08 CLS_cLiFproots_plant Festuca arundinacea cDNA clone CGACAACAACAACAAGAAGAAGAG EST sequence (targeted fragment marked with yellow): ATCAGATGGGAATGTTAGAACATTTCTATACAAAGTTCCAGAAACCATTTGTGGCGGGAATGTGTAAAGAACTGGCCAATGGAGCGAGAGATCTGAAAGACCCGCTATGTATGAGAGCATTCTACGAGGGAGGTAAAATGTTGGCGTACCATGTAAAGGGTTTGCTCCCCCTGTCTGACCCCTCCCTATTTGAACATGAGGGGGGCCTGCAAATTGTCTGCACAGGGTCTGTGTTTAAGAGCTGGGACCTGCTGAAGGAAGGTTTTCTGGGTGGTATGCGTGAGACAGTGTCTCTTGACAGAAGATTGAATGAGTTTACTCTTCTCTTTCTCGTTAAGCCCGCGAGCTATGGAGCTGCGTACCTAGCTGCCAAAGCCTCGGGCACGATCATTCCTGCTGACTATAGTAAAAACTGTACCGAGTTCTTTCATCATAAGTTCAGGTAGAGCGGAAAGCTTGACCATATGATCTGAGGGAGATGTGAGATCATTTAAAGTTTTCTCTTCTGATTTCTAATTCAGGGACGTGTTATTCTTGTTGTGTGATCACTATCTAATGGTACAATTAAATTATATATTAATTTGTCTGCTAGTTACGCTCTGTCGTCTGATTTATCATCTATACTGCATTTGTGTTGTGTTGCAATATGTACTGTTCTGCATACTGTTTTAATGGGTTACATTTTTATGTTCAATTCTTTGTTTATTGTCTAGTTACTCTAGTATTAATTTGAACGAGATCTTAGCTTTACACACTATACCTGCTCTAGAATCATTACTTTTCTCCTGGCTGATTTAACGTTAGATGTGTAGGGTGGATACACAAATACATGTATCTATCCTATTACACACACATATATATGGGTTCTGTGTTTCTTTACAAATTGCCTTAGGAAGGGCATCCGGCATTTCAAGCACGCCTAATAGCCTTACGCCTATCAATTTTTGATGACCATGCTGGCGAAAACTTGCTTACCCCGCTAGAGAAGGAAATAGCGATCTAACGTGTTTTGTTCTTGTTGTTGTTGTTGGTGGTGGTGGTAGGAACTCTCCTAAA | |||||||||
gi|257176537|gb|GT034402.1|GT034402 CLS_cLiFproots_15a2_1_e24cLibkit5LD_C12 CLS_cLiFproots_plant Festuca arundinacea cDNA clone CGACAACAACAACAAGAAGAAGAG EST sequence (targeted fragment marked with yellow): TTCTTATAGATAATTGAATAAAAAAAAGTTGTTCAATAATCATTCATTAGAATCATTCAACGATAGTTATTGCCGTTCAGCGTTCTCTTCTCCCGTCGTGCTATTGCATTTGTCGAAGCGATCTGATTGGTTTCTTTTTCTGGGTCTTGGTTATTTTATTTTATGGTTATTTTATTTTATTTTTATTTTTATTTTTATTTTTGTTGTTGTTGTCGTCGTTGCTCATCCTTCTGCCCTCTCTCTCTCTTGGTGTATCGATGTTCGCTCCTCGTGGTCTTCGTCCCTTGGAGTCGGTGCAATGCTTTCTATGCAAAGAATATGGTCATTATGCGAATGATCCTCGATGTCCTCTTCGTAATCGAACGCCAATGCAATCTTCTTTTCATCAGTCAGCGCCGATGTTCTCTCCTCCATCAATGCATTATTTTTCCTCTCCTCCTTCTTCTTCTTCGAATTCTTCGATCGATGCTTCTCTCGTTCAGTTTCGCGATGGTGTTACTGTGTTTGATGCTCTCATGAATTTGATGGCGGATAATATTGCATTGAAGAAAGAATTATCGGAATTGCGTCAGCGATTATCATCGATCACTCTTCATCCTGCTTCTTCATCTGTTGTTGTTCCAAATGCTTCATCATCGTCCTCCTCTTCTTCGTCCACTCTCCCCTCTTCTGCTTTCCGTCGTCCTTCTCCTCCTCGTTTTTCTTCCTCTTCGTTTGTTCCTCCATTATCAGTTGAAATAGATGAAGAAGAAAAAAATGCGATGCAGGAATTTATTGCGATGGCGACTGATTCGTCAGATGCACCTCAGATTCTTGGTCCTCTTCATTCAGCAAAAAAGAAAAAGAAGAAAAATAATAGAAGAAAATAATTATTATTTTTTGTTTGTATGATTTTCTGATTAGGAAAATGGGTACTCCTCCGTCGATGGTATGCTGGGTGGGGGGGAGAGGGGGGGCTGATGGTTGTGCT | |||||||||
gi|74439469|gb|DT695644.1|DT695644 s13dFA41C11LF086_70909 Tall fescue, Festuca arundinacea Schreb, leaf Festuca arundinacea cDNA CGACAACAACAACAAGAAGAAGAG EST sequence (targeted fragment marked with yellow): GGCACGAGGTCCTCCTCCTCTTCTTGTTGTTGTCGTGTGGTCTTAGCGGAGCACGAAGCGGGCACCGATCGGCAGAGCAATGGCGTCGAGCGGGTTGAGGAGCTGCAGCGCGGTGGGCGTGCCCAGCCTGCTGGCCCCGTCGTCGGGGCGGTCCCGGTTCTGTGTGGCCTCCGCCACCACCACCTCCGGCCGCGTCACCATGTCCGCCGAGTGGTTCCCCGGCCAGCCACGCCCCGCCCACCTCGACGGCTCCTCGCCAGGCGACTTCGGTTTCGACCCTCTTGGCCTCGCCACCGTCCCGGAGAACTTCGAGCGGTTCAAGGAGTCGGAGATCTACCACTGCCGGTGGGCGATGCTGGCGGTGCCCGGCGTGCTCATCCCTGAGGCCCTGGGTCTGGGCAACTGGGTCAAGGCGCAGGAGTGGGCGGCCATC | |||||||||
gi|74427226|gb|DT683401.1|DT683401 s13dFA93F12DS103_475114 Tall fescue, Festuca arundinacea Schreb, Drought Stress Festuca arund CGACAACAACAACAAGAAGAAGAG EST sequence (targeted fragment marked with yellow): GCACGAGGCTCCTCCTCCTCTTCTTGTTGTTGTCGTGTGGTCTTAGCGGAGCACGAAGCGGGCACCGATCGGCAGAGCAATGGCGTCGAGCGGGTTGAGGAGCTGCAGCGCGGTGGGCGTGCCCAGCCTGCTGGCCCCGTCGTCGGGGCGGTCCCGGTTCTGTGTGGCCTCCGCCACCACCACCTCCGGCCGCGTCACCATGTCCGCCGAGTGGTTCCCCGGCCAGCCACGCCCCGCCCACCTCGACGGCTCCTCGCCAGGCGACTTCGGTTTCGACCCTCTTGGCCTCGCCACCGTCCCGGAGAACTTCGAGCGGTTCAAGGAGTCGGAGATCTACCACTGCCGGTGGGCGATGCTGGCGGTGCCCGGCGTGCTCATCCCTGAGGCCCTGGGTCTGGGCAACTGGGTCAAGGCGCAGGAGTGGGCGGCCATCCCCGGCGGGCAGGCGACATACCTGGGCAACGCCGTGCCGTGGGGTAACCTCCCCACCATCCTGGCCATCGAGTTCCTGGCCATCGCCTTCGCGGAGCAGCAGCGCA | |||||||||