| mature miRNA: CGACGGTATTACCGACGGAA species: Populus trichocarpa database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|73879489|gb|DT482227.1|DT482227 WS02519.B21_E01 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02519_E01 3', mRNA sequence CGACGGTATTACCGACGGAA EST sequence (targeted fragment marked with yellow): GGTTTGATGTCTTTCTTGACAAGATTATTGATGAGCATGTCCAATACCAGGAGAAGGGCAAAAACAAGGACTTTGTTGATGTCATGCTAAGTTTGATGAAATCCAAAGAAAACGAGTACCTTGTTGATCAAGGCTGTATGAAAGCCACAATGCTGGACATGCTTGTGGGTTCAATGGACACTCCAGCAACTGTGATTGACTGGGCATTCTCAGAACTGATAAAAAATCCACGGGTTATGAAGAAACTGCAAAAAGAAATAGAAGAAGTGGACATGACAGAAGAGTTTGGTCTCGTACTCTGCAGGTCCAAGCATCTAGTAGCTATTCCTACATATCGCCTTAACAAATGAAACTAAATGTGTCATTGTCTTGTTTTAGATCAAAATAATGTTCCCTGCTAAATTGCTCCTTCAGGGATTCTGTGTGCTTTCTTGTTCATCACACTCTTTAAAGGATTTTACCATCTTCTTTAGGGCAAATAATTTTTTTTTTCCGTCGGCATATTTATGAACGTATTTTATCATCGGGTTATTTTCATTGGTAATGCCGTCTATAAAAGTTATACACCATCGTACTATTTAATTTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAAAAAAAAAAAAAAA | |||||||||
gi|52495187|gb|CV242212.1|CV242212 WS02514.B21.1_H05 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02514_H05 3', mRNA sequence CGACGGTATTACCGACGGAA EST sequence (targeted fragment marked with yellow): GAAGAAATCACATGTTATAATCAATGTATGGGCCATTGGTCGAGACCCAAAAGCTTGGACAGATGCAGAAAAGTTTTACCCAGAGAGGTTTGTTGGTAGTGACATAGATGTTCGGGGCCGAGACTTCCAGCTTATTCCATTTGGCACTGGCCGCAGAAGCTGCCCTGGAATGCAATTGGGGCTAACTGTGGTGCGACTGGTGCTTGCGCAGCTGGTGCATTGCTTTGATTGGGAACTTCCAAATGGAATATTGCCATCTGAAGTGGACATGACAGAAGAGTTTGGTCTCGTACTCTGCAGGTCCAAGCATCTAGTAGCTATTCCTACATATCGCCTTAACAAATGAAACTAAATGTGTCATTGTCTTGTTTTAGATCAAAATAATGTTCCCTGCTAAATTGCTCCTTCAGGGATTCTGTGTGCTTTCTTGTTCATCACACTCTTTAAAGGATTTTACCATCTTCTTTAGGGCAAATAATTTTTTTTTTCCGTCGGCATATTTATGAACGTATTTTATCATCGGGTTATTTTCATTGGTAATGCCGTCTATAAAAGTTATACACCATCGTACCAAAAAAAAAAAAAAAAAA | |||||||||