| mature miRNA: CGGACCAGGCTTCATTCCC species: Gossypium hirsutum database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|109884060|gb|DW513030.1|DW513030 GH_TMIRS_169_A05 Cotton Normalized Library dT primed Gossypium hirsutum cDNA, mRNA sequence CGGACCAGGCTTCATTCCC EST sequence (targeted fragment marked with yellow): TCAGTGGATGGACTGAATCTTCACCACCAAAACCAAAATGGGTTCGAGCAAAGGTTGTTGATATCCTAGGATTTGAGTTAGCAAAGAGTTCAGTGCTGTTACCACTTGTCTGGAACATACAAGTCAGCACCTGGCTTCGTCATTATGTTTATGAGAGACTTGTTAAGAAGGGGAAGAAGCCTGGTTTTTTCCAGCTACTGGCCACACAGACCGTTAGTGCTGTTTGGCATGGACTGTATCCTGGGTACATTATATTCTTTGTTCAGTCAGCTTTGATGATTGCTGGTTCAAGAGTTATTTACCAATGGGAAAAAGCTATACCCACAAATATGGCTCTTGTGAAGAAAGCATTTGCCGTGATGAACTTTGCTTACACACTTTTGGTTCTGAACTACTCCTGTGTTGGCTTTATGGTATTAAGCAAGCACGAGACACTTGCATCATATGGGAGTGTGTATTATATTGGAACCATCATTCCGATAGCATTGATTATCTTGGGCTACATAATACCTGC | |||||||||
gi|109884922|gb|DW513892.1|DW513892 GH_TMIRS_177_B02_F Cotton Normalized Library dT primed Gossypium hirsutum cDNA, mRNA sequenc CGGACCAGGCTTCATTCCC EST sequence (targeted fragment marked with yellow): TTAGCTACCACGGATACAAGTTGTGAATCAGTAGTGACGAGCGGTCAACACCATTTGACTCCTCAACATCCGCCAAGGGATGCCAGCCCTGCAGGAGGAAACTTTAACAGAGTTTCTTTCAAAGGCCACTGGAACTGCTGTCAAGTGGGTCCAAATGCCTGGGATGAAGCCTGGTCCGGATTCTATTGGAATCGTTGCTATTTCTCATGGTTGCAGTGGTGTGGCAGCACGTGCATGCGGACTTGTGGGACTAGATCCTACAAGAGTCGTTGAAATCCTTAAAGATCGGCCTTCATGGTATCATGATTGTCGAGCTGTGGATGTTACAAACGTGTTGTCCACTGGAAATGGTGGAACCATTGAACTGCTTTATATGCAGACGTCAGGAGATTTTCAAGGAAACAACAGACCACATGTATAATAATGCAGCGACTCAGGAGCGGGAAACTACTTTGAATCAGCTACTAATAGAGCTTGATGGGTTTGATACTGGCAAAGGTGTTATATTTTCGGCTGCTACAAATCGTAGAGATTTGTTAGATCCTGCACTTCTCAGGCAAGGTCGTTTTGATCGTGAGGTTAATTTCCATCACTTGAATAG | |||||||||
gi|164368292|gb|EV485200.1|EV485200 075H11 Cotton Lambda Zap Express Library Gossypium hirsutum cDNA, mRNA sequence CGGACCAGGCTTCATTCCC EST sequence (targeted fragment marked with yellow): AAGAAAGATGATGGAAAGGGGTTTTATTGTTTTGGCCTTGACGGTGGTTTTCGCCGCGACGGTGGTTACGGCGGCTGACGAGAGTGGGTTAGCGAATGAGTGCAGCAAAGATTCCAGAGCGTGATGACTTGCTTAAGCTTTGCTCAATGAAAAGCAGCGTCGCCGTCGAAGGAGTGTTGTAATTCAGTGGCGGGGATTAAAGAGAATAAACCCAAATGTTTGTGTTATATTTTGCAACAAACACAAACTTCCGGTGCTCAAAATCTCAAAAGCTTAGGTGTTCAAGAAGATAAGCTGTTTCAGTTACCGTCGGCTTGTCAATTGAAGAACGCTAGCGTCAGTGATTGCCCAAAGCTTCTTGGGTTATCTCCGAGCTCACCAGACGCCGCCATCTTCACCAACTCCTCCTCTAAAGCAACGACACCCAGTACTTCAACAACCACCGCAACGCCGTCTTCCGCGGGCGATAAAACCGATAGCAAATCCAGTGGAATCAAGCTTGGTCCCCACTTCGTCGGTTCCACGGCGGCGCTACTGGTTGCTACATGCGGCCGTGTTTTTCCTTGTTTTTCCCGGCTGTGATTGGCTTCAATAAGTTAGGGGGTTTTGCATGGGATTTCACGACTTGGGGGTTATTCATTGGTGACGTCATTTTGTTTTACACGGCTCCAAAAAAAGTGGCTTGGTGCCA | |||||||||
gi|164361892|gb|EV482580.1|EV482580 021C08 Cotton Lambda Zap Express Library Gossypium hirsutum cDNA, mRNA sequence CGGACCAGGCTTCATTCCC EST sequence (targeted fragment marked with yellow): GAGCAGTGAAGAAGATAGAAGGGGTTTATTGTTTTGGCCTTGACGGTGGTTTTCGCCGCGACGGTGGTTACGGCGGCTGACGAGAGTGGGTTAGCGAATGAGTGCAGCAAAGATTCCAGAGCGTGATGACTTGCTTAAGCTTTGCTCAAGGAAAAGCAGCGTCGCCGTCGAAGGAGTGTTGTAATTCAGTGGCGGGGATTAAAGAGAATAAACCCAAATGTTTGTGTTATATTTTGCAACAAACACAAACTTCCGGTGCTCAAAATCTCAAAAGCTTAGGTGTTCAAGAAGATAAGCTGTTTCAGTTACCGTCGGCTTGTCAATTGAAGAACGCTAGCGTCAGTGATTGCCCAAAGCTTCTTGGGTTATCTCCGAGCTCACCAGACGCCGCCATCTTCACCAACTCCTCCTCTAAAGCAACGACACCCAGTACTTCAACAACCACCGCAACGCCGTCTTCCGCGGACGATAAAACCGATAGCAAATCCAGTGGAATCAAGCTTGGTCCCCACTTCGTCGGTTCCACGGCGGCGCTACTGGTTGCTACAGCGGCCGTGTATTTCCTTGTATTCCCAG | |||||||||
gi|5045451|gb|AI726599.1|AI726599 BNLGHi6244 Six-day Cotton fiber Gossypium hirsutum cDNA 5' similar to (AC004521) unknown prote CGGACCAGGCTTCATTCCC EST sequence (targeted fragment marked with yellow): GTTGAGCAGTGAAGAAAGATGATGGAAAGGGGTTTTATTGTTTTGGCCTTGACGGTGGTTTTCGCCGCGACGGTGGTTACGGCGGCTGACGAGAGTGGGTTANCNAATGAGTGCAGCAAAGATTTCCAGAGCGTGATGACTTGCTTAAGCTTTGCTCAAGGAAAAGCAGCGTCGCCGTCGAAGGAGTGTTGTAATTCAGTGGCGGGGATTAAAGAGAATAAACCCAAATGTTTGTGTTATATTTTGCAACAAACACAAACTTCCGGTGCTCAAAATCTCAAAAGCTTAGGTGTTCAAGAAGATAAGCTGTTTCAGTTACCGTCGGCTTGTCAATTGAAGAACGCTAGCGTCAGTGATTGCCCAAAGCTTCTTGGGTTATCTCCGAGCTCACCAGACGCCGCCATCTTCACCAACTCCTCCTCTAAAGCAACGACACCCAGTACTTCAACAACCACCGCAACGCCGTCTTCCGCGGCCGATAAAACCGATAGCAAATCCAGTGGAATCAAGCTTGGTCCCCACTTCGTCGGTTCCACNGCGGCGCTACTGGTTGCTACANCCGCCGTGTTTTTCCTTGTATTCCCANCTGGATTTGCTTCAATAGTTTAGGGGTCTTGA | |||||||||
gi|109853879|gb|DW482858.1|DW482858 GH_RMIRS_038_F07_R Cotton Normalized Library random primed Gossypium hirsutum cDNA, mRNA seq CGGACCAGGCTTCATTCCC EST sequence (targeted fragment marked with yellow): AGCGCCGCCGTGGAACCGACGAAGTGGGGATCAAGCTTGGTTCCACTGGATTTGCTATCGGTTTTATCCGCCGCGGAAGACGGCGTTGCGGTGGTTGCTGAAGTACTGGGTGTCGTTGCTTTAGAGGAGGAGTTGGTGAAGATGGCGGCGTCTGGTGAGCTCGGAGATAACCCAAGAAGCTTTGGGCAATCACTGACGCTAGCGTTCTTCAATTGACAAGCCGATGGTAACTGAAACAGCTTATCTTCTTGAACACCTAAGCTTTTGAGATTTTGAGCACCAGAGGTTTGTGTTTGTTGCAAAATATAACACAAACATTTGGGTTTATTCTCTTTAATCCCCGCCACTGAATTACAGCACTCCTTCGACGGCGACGCTGCTTTTCCTTGAGCAAAGCTTAAGCAAGTCATCACGCTCTGGAAATCTTTGCTGCACTCATTCGCTAACCCACTCTCGTCAGCCGCCGTAACCACCGTCGCGGCGGAAACCACCATCAAGGCCAAAACAATAAAACCCATTTTGATCATCTTTCTTC | |||||||||
gi|164343589|gb|ES832414.1|ES832414 UFL_412_03 Cotton fiber 0-10 day post anthesis Gossypium hirsutum cDNA, mRNA sequence CGGACCAGGCTTCATTCCC EST sequence (targeted fragment marked with yellow): GGCACGAGAAACACCCCCATCTCACCCCTCCGTTGCTATTTTCAATCAAGAAACTCTCCGGCAGCAGTCTTGATTTGGTTTCCAGTTAGACTCTGAGATAGAAGAGATGGCAGTGAACTAGACGACGGCGTTGAAGATGTAGAGAAAAACAACGAAAAGAAGCATCACGCCTCCAAGCTGTGAATAGGAAGTTGACAGCTATGAATAAACTGTTGATGGAGGAGAATGATAGGTTACAAAAGCAAGTTTCACAGCTTGTTTATGAAAACAACTATTTCCGCCAACAGACTCAAAATACGACTTTAGCTACCACGGATACAAGTTGTGAATCAGTAGTGACGAGCGGTAAACACCATTTGACTCCTCAACATCCGCCAAGGGATGCCAGCCCTACAGGACTTTTGTACATTGCAGAGGAAACTTTAACAGAGTTTCTTTCAAAGGCCACTGGAACTGCTGTCGAGTGGGTCCAAATGCCTGGGATGAAGCCTGGTTCGGATTCTATTGGAATCGTTGCTATTTCTCATGGTTGCAGTGGTGTGGCAGCACGTGCATGCAGACTTGTGGGACTGGATCCTACAAGAGTCACTGAAATCCTTAAAGATCGGCCTTCATGGTATCGTGATTGCCGAGCTGTGGATGTTACAAACGTGTTGTCCACTGGAAATGGTGGAACCATTGAACTGCTTTATATGCAGTTTCTTCTAGTCAAGTTTGCAAAAATGATTAGTGTAACTGTATCCCAGTTTTTGGAGGCGGGATGTCACTCATGTGACTGCCTCTACAGATGAGAATGGTGCATGCACTAGGACCCTAAAAGTTCTCATGGCAATTTTAAACGGGAAGGGGGTCTTAAATAAATTACGTCCGGAGATTTTCAGGGAACCAACCGACCCCTTGTATAATAATGGCGCGACTCCGGAGCGGGAAACTACTTTGAATCCACTACCTATAAAGCTTGATGGGTTTTGATCCGGGCAAAGGGGTTATATTTTTCGGCTGGCTTCAAATTCGAAAAAAATTTGTTAAATCCTGGCACTTTCTCGGGCAAGGTCGTTTTTGATAGCCAGGGTTAATTTTCCCATCCCCTTGGATTAGCAAATTCTAATTTAGTTTAAATTTCCCTTCACTTTGGAATAAGCAAAATTTTTTTTTAAATTTACATTTTTTTTTTAATATTTTAAATTTTTTTTCCGGGGAAAATTATAAAAAAAAATTTTTAAAAAAAACCCATTTTTTT | |||||||||
gi|164276366|gb|ES808873.1|ES808873 UFL_236_30 Cotton fiber 0-10 day post anthesis Gossypium hirsutum cDNA, mRNA sequence CGGACCAGGCTTCATTCCC EST sequence (targeted fragment marked with yellow): GGCACGAGTAAAGATGGGACAGCTGAGTGTGTTGACTGGTAACAATGGCGAAATTCGTGCTAATTGCTCGGTGAGGAATGCTGATAATAAGTCGTACTTTGCGTCTGTGGTGGAAGAGCTACCGGTGGAGGAAGCTTGGTCTGACCTTTAAACACTTAATAAGCTATTCAAGCATGTAACATGTTAACTATGTGACTGTTTAGCATTTAATGTATGACAGTGGGGCGACTGAGGTTTGTATTTTACTGTGTATGGGAGATTATGTTCTACAGTTTTTACTCGTTTTCGTTTCGGGTTTTATTGAAAAAAATTGCAGACTTTTACTCAAAAAAAAAAAAAAAAAAACTCGCTCGTGCCGAATTCGGCACGAGGAATGAAGGAGGGTCAGAATGATATCTACTACATCACTGGTGAGAGTAAAAAGGCAGTTGAGAACTCTCCCTTCCTTGAGAAGCTGAAGAAGAAGGGTTATGAGGTCCTTTACATGGTTGATGCTATTGATGAGTATGCTGTCGGACAGCTCANAGAATTTGAGGGCAAAAAGCTTGTGTCAGCTACCAAGGAAGGTCTTAAACTTGATGAGAGTGAGGATGAGAAGAAGAAGAAGGAAGCTTTGAAGAAAAAGTTTGAGGGTCTTTGCAAGTCATCAAGGATGTGCTGGGTGACAGGGTTAAAAAGGTGGGGGTTTCTGATCGGGTGGGTGACTCACCTTGCTGTTTAGTGACTGGCGAGTATGGTGGAATGGAAACTTGAAAAGAATCATGAAGGGCCCAGCTTTGAGGGAAAACACCATGCCTGGTTACATGTCAAGCAAAAAAACATGGAAATCAACCCGGAAAACCCCATTCTGGGAAGAGCTTAAAAAAAAAACCCAATGCCAAAAAAAATGGAAATTTTTTGAAAGGACCTTGTTTTCCTTTTTTTTCAAAATGGGCTTCCCTCCCTCTGGGGTTTCACCTTTGATAACCCTACCACCTTTGGCAAAAAAATCCCCAAGAATGCTGAAACTTGGCTTGACCATTTATAAGAATGCAGGTGAAGGTGAAGGTGATGCTGATTTGCCCCCATTGGAGGATTCTGATGCCGAAGGGACAAAAAGGGGGAAAGTTGATAAACCCAAAATGTTTTTTAAAAAAAAAAATTTTTTTTATTTTTTAAAAAACCTGTATACTTTTTTTTTTTTTTTTTTTTGGGGGGTTTTTCTTTTTTTTTTTTTTTTGGTGTTATTTTTTTTGTGGGAGAACCCCCTTTAAAAAAAAAAAAAGAGGGGGGTTTTTTTTTTTTTTGTGGGTGTTTTTTATTAAAAAAAAAAAAAAAAAAA | |||||||||
gi|164317275|gb|ES808067.1|ES808067 UFL_292_70 Cotton fiber 0-10 day post anthesis Gossypium hirsutum cDNA, mRNA sequence CGGACCAGGCTTCATTCCC EST sequence (targeted fragment marked with yellow): GGCACGAGCCAAAATAGAAGATGTAGAGAGAAACAGAGAAAAGAGGCATCACGCCTTCAAGCTGTAAATAGGAAGCTGACAGCAATGAACAAGCTTTTGATGGAGGAGAATGATAGGTTGCAAAAGCAGGTGTCACAGCTGGTTTATGAAAACGGATGCTTTCGCCAACATACTCAGAATGCTACACTTGCAACCAAAGATCCTAGCTGTGAATCGGCAGTGATGAGTGGTCAACAACGTGAAACACATCAGCATCCTCCAAGAGATGCTAGTCCTGCAGGGCTTTTGTCCATTGCAGAAGAGACTTTAGCAGAGTTTCTTTCGAAGGCCACTGGAACTGCTGTAGAGTGGGTCCAAATGCCTGGAATGAAGCCTGGTCCGGATTCCATAGGAATCATTGCTATTTCTCATGGTTGCCCTGGAGTGGCAGCACGTGCCTGCGGCCTTGTGGGTCTTGAACCTACAAGAGTTGCAGAACTCCTCAAGGATAGGCCTTCGTGGTTCCACGATTGCCGAGCTGTGGATGTTCTAAATGTGCTGCCTACTGCCAATGGTGGAACCATTGAGCTGCTGTACATGCAGCTCTATGCGCCGACGACGTTGGCGCCTGCTCGTGACTTCTGGTTATTGCGTTATACTTCTGTTCTAGAAGATGGAAGCCTCGTTGTCTGTGAGAGATCTCTGAAGAATACTCAAAATGGCCCTAGCATGCCTCCAGTCCAGCATTTTGTGAGAGCAGAAATGTTGCCAAGTGGATACCTTATTCGACCTTGTGAAGGGGGTGGGTTCATCATACATATTGTTGATCATATGGATTTGGAGCCATGGAGTGTGCCTGAAGTGTTGCGCCCACTTTATGAATCATCAACAGTGCTTGCTCAGAAGACAACAATGGCAGCTTTACGAACACTGAGGCAGATAGCTCAGGAGGTTTCTCAGTCTAATGTGACTGGTTGGGGACGACGGCAGCAGCTTTACGGGCTCTTACCAGAGGTTGACAGGGGGTTTAATGATGCTGTGAATGGGTTCACTGATGAAGGTTGGTCAATAATGGGAAATGGAGGGCATGGATGAAGGTAACCATTCTTTGGGGACCCCTTCCCCGGGAAAACCAAGGGGGCCCCAACCTTTTCCTTTGGAAAGGGATTTCCCTTCTGCTACCAAGTGGCAGGGGTATGGGGCTAAAGGCCCTCCCATGCCTTTTTTAAAAAAGGGTACCCCCCCGGTTCTCACTTTTTTTTTTTTTTTTCCCTCGCGGGAGAACAAAAAAACAAAAAAAAAGGGGGGGTGGACAAACAACAACATCTGTTAAGCCCCCCC | |||||||||
gi|72274387|gb|DT049631.1|DT049631 COT_DP_C08 Fiber and Ovule of Xu-142 Lambda Zap Express Library Gossypium hirsutum cDNA 3' si CGGACCAGGCTTCATTCCC EST sequence (targeted fragment marked with yellow): GGTNTGCTTAGATATAAACGAATTACCAAATAAAGCAACATTCCAGTAGAAGTTTGATTATGAGTACATACAAATATTCATATCCTCCCACATATAAACGAGAACTCTACACCCTTTATTCGAATAATATCCAAAGCCCAACTCAGGTATGCGATTGCGCTTTACCATCCTCCTCTTTGAGAACCACCAGAGGAATGTGCATTTAATCTATCAAGCACAGCATTGAAATCCGGAGGCTGCCCGCTCTCTTCCATCCTCTGGATCACACTGGCAACATGATCACCTCTGAAACCCATGCTCACCAACTTTTCAATCAGCTCACTGTAGGGATGATGCGAACAAACTGCGGATGGTTGGTGTTCCTAACCATAACATTAGGGCCAGCACCTGGTTGAGTCTGAAGAGAGACATTTGCTGCTGGGGGATACCCACCCTGTGTGAAGTTAGGCTGCTGGGACGGGTGATGTGTTCTACCCCCTTCACTATCATATACCATGTATGCACTTCCTGGGAGGAAAGGTGGGATTGGAGCCAGGTCCTGTGTACCTAT | |||||||||
gi|109859360|gb|DW488339.1|DW488339 GH_RMIRS_069_A08_F Cotton Normalized Library random primed Gossypium hirsutum cDNA, mRNA seq CGGACCAGGCTTCATTCCC EST sequence (targeted fragment marked with yellow): CACTGTTTTCAACAATGCCCACCAAATTAAATGCTGCTTAAGCCATGAAACTGTAAAAGATGATGAAGAAACTGGTGTGGAGAACAGTAGAGATATCGAATTTGGAGGAATTCCAGATCCTCCTGTGCTCACCTTAAGCAGGTACCAGCTTGGGAATATAGCTTGGTCCTATGCAGTTTTCGGACAGCTTGATCGAACGTTCTTTTCTCATGTATGGAAAACATTGAGCAGTTTTGAGGGGCAACGGATTTCAGAACAATATAGAGGGGATGTCATGTTTGCATCACAGGTTCATCTGGTGAACCAATGCTTAAAGCTCGATTATTCACATCTTCAGCTATCCATTGATGGTGAACTCGAGTCAAAAATCGTTCGTGCTTGGAAAACAAAGAGGTTCAATCAAAAGACAACTTCATCTTTCCAAAAGGAAGTTGGTCGTCTTCTTGTGAGCACTGGCCTTGATTGGGTTAGGGAGCACCCTACGGACTGCTACACCATTGATGCTGTTCTTGTTGATCAAAAGGTTGCTTTGGAGATTGATGGACCAACACATTTCTCAAGAAATACTGGAACACCATTAGGGCATACCATTTTAAAACGGCGTCATATTGCCGCTTCTGGTTGGAGATTTGTATCATTGTCTTATCAAGAGTGGGAGGAACTTGAANGGGAAGTAGAGCAGCTTGAGTACCTGAGGAAAATTC | |||||||||
gi|5048196|gb|AI729344.1|AI729344 BNLGHi13140 Six-day Cotton fiber Gossypium hirsutum cDNA 5' similar to (AC004521) unknown prot CGGACCAGGCTTCATTCCC EST sequence (targeted fragment marked with yellow): GGTTTTATTGTTTTGGCCTTGACGGTGGTTTTCGCCGCGACGGTGGTTACGGCGGCTGACGAGAGTGGGTTAGCGAATGAGTGCAGCAAAGATTTCCAGAGCGTGATGACTTGCTTAAGCTTTGCTCAAGGAAAAGCAGCGTCGCCGTCGAAGGAGTGTTGTAATTCAGTGGCGGGGATTAAAGAGAATAAACCCAAATGTTTGTGTTATATTTTGCAACAAACACAAACTTCCGGTGCTCAAAATCTCAAAAGCTTAGGTGTTCAAGAAGATAAGCTGTTTCAGTTACCGTCGGCTTGTCAATTGAAGAACGCTAGCGTCAGTGATTGCCCAAAGCTTCTTGGGTTATCTCCGAGCTCACCAGACGCCGCCATCTTCACCAACTCCTCCTCTAAAGCAACGACACCCAGTACTTCAACAACCACCGCAACGCCGTCTTCCGCGGCCGATAAAACCGATAGCAAATCCAGTGGAATCAAGCTTGGTCCCCACTTCCTCCGTTCCACGGCGGGCCTACTGGTTGCTACAGCGGCCGTGTTTTTCCTTGTATTCCCGCTGGGATTTGCCTCAATAGTTTAGGGGTCTTGCCTGGGATTTCGACATTTGGACGTTTATTTATTGTTGAAGTCCTTTTGTTTCTAAACGGTCTCCCACAAAAGATGGACTGAGTTGACCATTATGATGATTTCTCCTTT | |||||||||
gi|66907975|gb|DR044139.1|DR044139 g033c05a Gossypium hirsutum 5-25 dpa fiber library Gossypium hirsutum cDNA, mRNA sequence CGGACCAGGCTTCATTCCC EST sequence (targeted fragment marked with yellow): GGGGCAAGAGATAAATGCTTCAGGTGGGAAAAGGAATGCTGGAGGTAGTTGGCTTTCTGTGAGTCAGGGTATTGCAGAAGATGCATCTGATCTGGTTTCTGGTTTTGCTACTATTGGTGATGGATTAAGTGAATCTATTGATTACCCAAACGAGTATTGGGAGTCTGATGAATATGATGACGATGATGATGTTGGATACATGAGACAACCTATTGAGGATGAAGCCTGGTTTCTGGCTCATGAAATCGATTATCCTAGTGACAATGAGAAGGGAACTGGGCATGGGAGTGTTCGGGATCCTCAAGAAAGAAGTCAAACCAAGGATGATGATGATGATCAATCATTTGCAGAAGAGGATTCTTACTTCTCTGGTGAGCGGTATTTCCAGGCAAAGAATGTTGAACCTGTNGCAGCTTCAGATGATAACTATAGGGCCCTCTGTAACTGAAATATACAAATGGGACTCATGAGAATGATTTAATTGCCCAATATGATGGACAGCTTAATGGATGAAGAGGGAGCTTAATTTTGATGCGTGCTTGAAACTGTTTTGGCA | |||||||||
gi|164264305|gb|ES813647.1|ES813647 UFL_176_50 Cotton fiber 0-10 day post anthesis Gossypium hirsutum cDNA, mRNA sequence CGGACCAGGCTTCATTCCC EST sequence (targeted fragment marked with yellow): GGCACGAGGGCGGTGACGAGTGGTCAACACCATTTGACTCCTCAGCATCCTCCGAAGGATGCCAGCCCTGCAGGACTTTTGTCCATTGCAGAGGAAACTTTAACAGAGTTTCTTTCATAGGCCACTGGAACTGCTGTGGAGTGGGTCCAAATGCCTGGGATGAAGCCTGGTCCGGATTCCATTGGAATCGTTGCTATTTCTCATGGTTGCACTGGAGTTGCAGCACGTGCATGTGGACTTGTGGGACTAGATCCTACAAGAGTTGCTGAAATCCTTAAAGATCGGCCTTCATGGTACCGTGATTGCCGAGCTGTGGATGTTATAAACATGTTGTCCACTGCTAATGGTGGAACCATCGAACTGCTTTATATGCAGCTCTACGCGCCTACAACATTGGCACCAGCTCGCGACTTCTGGTTGCTGCGCTACACATCTGTTATGGAGGATGGTAGTCTTGTGGTATGTGAAAGATCACTTAACAACACTCAAAATGGTCCAAGCATGCCGCCAGCAGTAAATTTTGTGAGAGCGGAATTGCTGCCTAGTGGTTACCTGATTAGACCTTGTGAAGGGGGTGGTTCCATCATTCACATAGTTGATCACATGGATNTGGAGCCTTGGAGTGTTCCTGAAGTGTTGCGGCCCCTTTACGAGTCCTCAACTTTGCTTGCTCAGAAGACACAATGGCGGCTTTGCGTCATTTGAGGCAGATTTCTCAGGAAATATCTCAGCCGAATGTTACTGGTTGGGGGAGAAGACCTGCAGCTCTGCGTGCACTTAGTCACAAATTGAGCAAGGGATTAATGAGGCTGTTAATGGGTTTACTGATGAAGGATGGTCAATGCTGGAAAGTGACGGCGTTGATGACGTTACCCTCCTGTTGACTCGTCTCCTGGAAAGATGAATGACATAAATTTTCTTATAGTAATGGATTCCTTCAAGGGAAATGCCGGTTCTAGTTCCAAAACTTTCAGTTTTTGCATAATGTGCCGCCGCAATATTTCTAAATCTTGCGGAAATTCCACAAATGGGCAAAAGGGTATTAATCTTTATCTGCGGCGTGCCAACCTGGACCTGTACTTGCCGGTCTCAGGGGAATTTGGGGGTTAATTTTTCCCTGCCCCCCAATGACTTAAAATTCGGAGTTTTACCCAAAGGGGGCCATACAAATTCTTCCATGATTTCCCTCCCCTTTTGGGTTTAAAAATCCCCCCCGTTAACTCTGCCCCGGGTTCCCCTGAACGCCTATCCCGGGCCACCCCCCTTTCGGGGGTCCCCACCCCCTCCCCCCCTTATGGGGCCACCCCGTATTTCGGGACAAGTACAATTCTT | |||||||||
gi|109823858|gb|DW008707.1|DW008707 GH_FFF_01-01-09R_E08_InvR_29Mar04_056_F.x fiber-five days after anthesis Gossypium hirsutum CGGACCAGGCTTCATTCCC EST sequence (targeted fragment marked with yellow): TTTTATTGTTTTGGCCTTGACGGTGGTTTTCGCCGCGACGGTGGTTACGGCGGCTGACGAGAGTGGGTTAGCGAATGAGTGCAGCAAAGATTTCCAGAGCGTGATGACTTGCTTAAGCTTTGCTCAAGGAAAAGCAGCGTCGCCGTCGAAGGAGTGTTGTAATTCAGTGGCGGGGATTAAAGAGAATAAACCCAAATGTTTGTGTTATATTTTGCAACAAACACAAACTTCCGGTGCTCAAAATCTCAAAAGCTTAGGTGTTCAAGAAGATAAGCTGTTTCAGTTACCGTCGGCTTGTCAATTGAAGAACGCTAGCGTCAGTGATTGCCCAAAGCTTCTTTGGTTATCTCCGAGCTCACCAGACGCCGCCATCTTCACCAACTCCTCCTCTAAAGCAACGACACCCAGTACTTNCACAACCACCGCAACGCCGTCTTCCGCGGCCGATAAAACCGATAGCAAATCCAGTGGAATCAAGCTTGGTCCCCACTTCGTCGGGTCCACGGCGGCGCTACTGGTTGCTACAGC | |||||||||
gi|109862018|gb|DW490995.1|DW490995 GH_RMIRS_083_F02_F Cotton Normalized Library random primed Gossypium hirsutum cDNA, mRNA seq CGGACCAGGCTTCATTCCC EST sequence (targeted fragment marked with yellow): GATACAAGCTGTGGCTCAGTGGTGACAAGTGGTCATCAACACCATTTGACTCCTCAGCATCCTCCAAGGGATGCCAGTCCTGCAGGACTTTTGTCTATTGCAGATGAAACTTAACAGAGTTTTTATCAAAGGCCACTGGAACCGCTGTGGAGTGGGTCCAAATGCCTGGGATGAAGCCTGGTCCGGATTCTATTGGAATCGTTGCTATTTCTCATGGTTGCACTGGAGTGGCAGCACGTGCATGCGGGCTTGTGGGACTTGATCCTACCAGGGTCGCTGAAATCCTTAAAGATCGGCCGTCATGGTTCCGTGATTGCCGAGCTGTGGATGTTATAAACGTGTTGTCCACTGGAAACGGTGGGACCATTGAACTGCTTTACATGCAGCTCTATGCGCCAACAACTTTGGCACCAGCTCGTGACTTCTGGTTGCTGCGCTACACATCTGTTTTAGAAGATGGTAGTCTTGTGGTATGTGAAAGATCACTTAACAATACTCAGAACGGTCCGAATGTGCCGCCAGCAGCGAATTTCGTTAGAGCAGAAATGCTGCCTAGTGGTTACCTAATTAGGCCTTGTGAAGGCGGTGGATCCATCATTCACGTTGTTGATCACATGGATTTGGAGCCCTGGTTGTCTCGTCCTCTGCCTGATG | |||||||||
gi|84173390|gb|DR462038.1|DR462038 CM103G06 Cotton Lambda Zap Express Library Gossypium hirsutum cDNA, mRNA sequence CGGACCAGGCTTCATTCCC EST sequence (targeted fragment marked with yellow): GCATGTTGCGGTTGCCTTGTGCAGAGAGGCAAAATTTGACATGATAAAGGAACTGGTAATTTTCTCTCTTGAAGCGAAAAGTTAAGCCCCGCTATGCCATATGTGACCCATTTATTGTGGCTTTGTGTAAAGCAAATAGGATTGAAGATGCGTATTTATTACATGGTGAAGTTTGTAGAATAAATAAAGATATTGCACGTGAAACTTACTTTCACTTGATTCATAGTTTTTGCCGGTCGAATAGAGGAGATATTGCTGCAACACTTTTATTTGAAATGCAGGAGAAGGGTCATAAACCAACTAGAACATTGTTCAGATCTGTTATCTGTTCCTTGTGTGATATGGAAAGTCCGGAAAACCAGTTCTTTAAAATGTTGGAGATGCAGTTATCTCATTTTGAGCCAGAAGCTCGTATTTTTAACTTTTTCATCTCCGGAGCTGGTTATGCCAAAAAGCCTGAACTAGCTAGAGAAGTCTTTGAGATGATGCAAAGAAGTGGGATTAAGCCTGGTCTGAGGTCCGACATCAGTATATTGGTTAGTTACCTACAGAATAACAGAATTTCTGATGCTCTAAACTTCTTTAATGACATACGTCAGAGAAGAAAGATAGGGAGAAAACTATATAGTTCCATGATAGTTGGTCATTGTAAAGCTGATCAGGCAGAATATGCACTGAGTTTCATGAACGAAAGCAGGGTTATAATGTTTTTCAAGCATGGAAGGTATGAGTTCTTTAAAGTGGTGGTTCGAGAAAGCACGTGTGCGTGAATGGTTAGGTGGGAATCGGGGATTCCCTTTGGGTGTTTTCTTCTTAAAACAGGGGGGGTTACGGGGGAAACATTTGGGCGGGAAGTTCATTATTGGGGCCGCTCTAAAA | |||||||||
gi|164365418|gb|ES812545.1|ES812545 UFL_301_74 Cotton fiber 0-10 day post anthesis Gossypium hirsutum cDNA, mRNA sequence CGGACCAGGCTTCATTCCC EST sequence (targeted fragment marked with yellow): GGCACGAGGATGGAAAGGGGTTTTATTGTTTTGGCCTTGACGGTGGTTTTCGCCGCGACGGTGGTTACGGCGGCTGACGAGAGTGGGTTAGCGAATGAGTGCAGCAAAGATTTCCAGAGCGTGATGACTTGCTTAAGCTTTGCTCAAGGAAAAGCAGCGTCGCCGTCGAAGGAGTGTTGTAATTCAGTGGCGGGGATTAAAGAGAATAAACCCAAATGTTTGTGTTATATTTTGCAACAAACACAAACTTCCGGTGCTCAAAATCTCAAAAGCTTAGGTGTTCAAGAAGATAAGCTGTTTCAGTTACCGTCGGCTTGTCAATTGAAGAACGCTAGCGTCAGTGATTGCCCAAAGCTTCTTGGGTTATCTCCGAGCTCACCAGACGCCGCCATCTTCACCAACTCCTCCTCTAAAGCAACGACACCCAGTACTTCAACAACCACCGCAACGCCGTCTTCCGCGGCCGATAAAACCGATAGCAAATCCAGTGGAATCAAGCTTGGTCCCCACTTCGTCGGTTCCACGGCGGCGCTACTGGTTGCTACAGCGGCCGTGTTTTTCCTTGTATTCCCAGCTGGATTTGCTTCAATAGTTTAGGGGTTTTGCATGGGATTTCGAGATTTGGAGGTTTATTTATTGTTGAAGTCCATTTGTTTTTAAACGGTCTCAGAAAAAAGATGGACTGAGTTGACAATTATGATGATTTTTCGTTTATTTTTCCTTTTTCTTATTTGATTTAACGTCCCTTTTGAATAAAACTAGTATATTTTCCCAGCTTCGCCTGGGAAATCCTTTATATATATATATTTAAAAATTTATAAATAATATTATAATTATCGGAAAAAAAAAAAAAAAAAAAA | |||||||||
gi|109833877|gb|DW232442.1|DW232442 GH_OVFIB_01-01-14R_G03_InvR_23Jan04_019_R Ovules - day of anthesis Gossypium hirsutum cDNA, CGGACCAGGCTTCATTCCC EST sequence (targeted fragment marked with yellow): AGATAAGTTGCAGGGGTTATTGCATTAGATAATAAAACTGAAATTAACCCAAATAAAAGCAAACATTTCCCAGTAGAAGTTTTAATTATGAGGTAACATACAAATATTCATATCCCTCCCAACATATAAACGAGAACTCTACCACCCTTTATTCGAATAATATCCAAAGCCCAACTCAGGTATGCGATTGCGCTTTACCATCCTCCTCTTTGAGAACCACCAGAGGAATGTGCATTTAATCTATCAAGCACAGCATTGAAATCCGGAGGCTGCCCGCTCTCTTCCATCCTATGGATCACACTGGCAACATGATCACCTCTGAAACCCATGCTCACCAACTTTTCAATCAGCTCACTGTAGGGATGATTGCGAACAAACTGCGGATGGTTGGTGTTCCTAACCATAACATTAGGGCCAGCACCTGGTTGAGTCTGAAGAGAGACATTTGCTGCTGGGGGATACCCACCCTGTGTGGAGTTAGGCTGCTGGGACGGGTGATGTGTTCTACCCCCTTCACTATCATATACCATGTATGCACTTCCTGGAGGAAAGGTGGGATTGGAGCCAGGTCCTGTGTACCTATCAGTCGGTTGTGCTCCAAAAGTGCCTTTGATTTGTTGAGGAGGTTGTTGGGGAGCTGTTCTGCCAGG | |||||||||