| mature miRNA: CGGCGGCGGTGGTGAGGACTC species: Triticum aestivum database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|222367208|gb|GH728618.1|GH728618 G750.118E02F010710 G750 Triticum aestivum cDNA clone G750118E02, mRNA sequence CGGCGGCGGTGGTGAGGACTC EST sequence (targeted fragment marked with yellow): CCACGCGTCGCCACGCGTCGCCACGATCCCCGGGTCCTCGCGGCGAAGAGCTCCTTGACTCAGCGCCGCTGCTCGGCGGCGGTGGGCGGCGTCGTGGCGCGCTGCGCCGGCCATCGCTCCGTGGGACGGCGCGGCTGCTGCGGCAGGGCGGTCGGCGGGCGATGCGGGAGCCGTCCCTGCTCGTGCGGGAGACTGCGGCGGAGCAGCTAGAGGAGCGCCAGGCCGACTGGGCGTACTCCCGCCCTGTCGTGGCACTCGACCTCCTCTGGAACCTCGCCTTCATCCTCACCACCGCCGTCGTGCTCGTGCTCAGCGGCGACGAAAGCCCGTCTGTGCCGCTCCGTATTTGGGTAGCCGGGTATGCCGTTCAGTTGCGTCCTGCACATGGTCTGTGTTGCCATGGAGTATCGTGTGCGTCACGGCCAGCGTGGCGGGTCCTCTACGGCCGCCGAACGAGGAGAGGGGCACTGATGGATCATCCTCGTCCATAGACGACGCCGGAAGAGAGCGGTCCCCATGGACGCATTTTGACGACTTCGTCAGTAACGGCAGT | |||||||||
gi|222362331|gb|GH722033.1|GH722033 AZO2.114H15F001116 AZO2 Triticum aestivum cDNA clone AZO2114H15, mRNA sequence CGGCGGCGGTGGTGAGGACTC EST sequence (targeted fragment marked with yellow): CACCCACCCAGGGCCGCACACCGCCGCCTCACCTCCTTTGTCCCCCTCCCGCCAGCTCCACGAGAAAAAGGTAGACCACGCCACCGCCGCCGCCGCCGCACGCTGTCATCGCCGGCTCCGCCTCCTTCCCGCCGCCGACTGTCCCGACAACTCCCGCAAGAATGGGGAGCACCGACGAGACTGGGACTCCCTATGGCGAGTACACCTATGCTGAGCTGGAGAGGGAGCTGTACTGGCCATCCGAGAAGCTGAGGATCTCGGTTACTGGAGCTGGTGGTTTCATTGGATCCCATATCGCTCGCCGCCTGAAGAGTGAGGGGCACTACATCATTGCCTCTGACTGGAAGAAGAACGAGCATATGACCGAGGACATGTTCTGCCATGAGTTCCACCTTGCTGACCTCAGGGTCATGGACAACTGCCTTAAGGTCACCACCAACGTCGACCATGTCTTCAATCTCGCTGCTGATATGGGAGGCATGGGCTTCATTCAGTCCAACCACTCTGTTATCATGTACAACAACACCATGATCAGCTTCAACATGCTTGAGGCCGGGCGTATCAACGGCGTGAAGAGGTTCTTCTATGCCTCGAGCGCATGCATCTACCCTGAATTCAACAGCTTGAGACAAATGTGAGCTTGAAGGAAGCTGATGCCTGGCCTGCTGAGCCACAAGATGCCTATGGCTTGGAG | |||||||||
gi|222362209|gb|GH724056.1|GH724056 G468.102N01F010808 G468 Triticum aestivum cDNA clone G468102N01, mRNA sequence CGGCGGCGGTGGTGAGGACTC EST sequence (targeted fragment marked with yellow): CCACGCGTCCGCCCGATTCGAGCGAGCCCGACGCCCCCCACCGACCGCGCCTTCCCCACCACACCGCAGCTCCGGCGGGCCCAAACCAAATCAATCGCCGGATCCCCCTCCCCCTTCTCCCTCTCCACCGCCCATGGAGCTGGCGACGCGCGATCTCGCGGCGCTCGGCGCGGCGGACCTGGTGCGGGTCTCCGCGGCGATCCCGCGCGCCGCGCCGCGCACCTTCGCGCTGCTCACCGCCTGCCTCGTCTTCCCGCTCTCCTTCGCCGTGCTCGCGCACTCCCTCTTCACCCACCCCATCCTCCGCCGCATCCGGACCTCCGACTACACCGCCACCTCCGCGCAGTGGGTCGCCCTCTTCGCCTACCAGTTCCTCTACCTCATCTTCCTCTTCACCTTCTCGCTCCTCTCCACCGCCGCCGCCGTCTTCACCGTCGCCTCCCTCTACGCCGCCAAGCCGGCCTCCATCGCCTCCTCGCTCTCCGCGCTGCCGCCCATCCTGCCCCGCCTCCTCCGCACCTTCCTCTGGGTCTCGCTCCTCATGCTCGCCTACCACGTCGGTTTCGTCATCACCGTCGTCCTCCTCATCCTCCTCTTCGACCCGGCCATGAACGGCTCCACCCGCCCCCGGTCTCCTTCCTCCTCGGCCTCCTC | |||||||||
gi|222360576|gb|GH721603.1|GH721603 AZO2.104C06F001123 AZO2 Triticum aestivum cDNA clone AZO2104C06, mRNA sequence CGGCGGCGGTGGTGAGGACTC EST sequence (targeted fragment marked with yellow): TCGACTCCGACGACTCCGCCCTCGAGTCCTCCGCCCCCGGGACCGCCTCCCAGCAGCGGATCCTCCAGCGGCTCGGCGCCGACTGGGCCGCCCTCGTCCTCTTCAAGGCCGCCTACCTCCTCGCGCTCCTCCTCTTCTCGCTCCTCTCCACCGCCGCCGCCGTCTTCTCCGTCGCCTCCGTCTACTCCGCCAAGCACGACGCGCTCACCTTCCCGCGGGTGCTCTCCGTCGTGCCCCGCGTCTGGCGCCGCCTCGCGGCCACCTTCCTCTCCGCCTTCGCGCTGCTCTTCGCCTACCACTTCGTCTTCGCCGTCGTCTTCATCGCGCTCCTCGTCGCCGTCGACAATGGCTCCACCCTCGCCGGGCTCCTCGCCTTCGTCGTCATCGTCGCCTACCTAGTCGGGCTCGTCTACCTCAGCGTCGTCTGGCACCTCGCCAGCGTCGTCTCGGTGCTCGAGGACTACAAGGGGTTCCAGGCCATGCGCAAGAGCAAGGCGCTCATCCAGGGGAAGCTCTGGACCGTCGTGATCATCTTCGTCACGCTCAACATCGTCTTCGTCGTCGTGGAGTTCGCCTTCCGCGCCTGGATCGTCCAGGNGCGCGCGCCACGGNTCTTCGCGCGGGGAAGGGAGGGCTCTCCT | |||||||||
gi|143793200|gb|CJ958930.1|CJ958930 CJ958930 Y. Ogihara unpublished cDNA library, whchul Triticum aestivum cDNA clone whchul19c0 CGGCGGCGGTGGTGAGGACTC EST sequence (targeted fragment marked with yellow): CGAAAGCCGAGTCGCAGCAGATCGGTTAAATCACCCCCAAAACGCACCCACCACCACAACTCCGGCGGCGGCGACCAGACGAACACGAGCACGAAGGCGATGGCGACTGCTCTCAACCGCGGCCTCCGCTCCGGGATCCGCCTCCTCGCCACCGGCGCCGAGGCCTCCAAGCCAGCTTCACGTGGATTCCATGCTACCGGCGTGAAGAGGATGTCAGGGCACGGCCATGATGAGCCATACTACCTCCACGCCAAGCACATGTACAACTTGCACAGGATGAAGCATCAGAAGCTGACTGCATGGACTTCAGTGCTGGGAGCCGTAAGCATTGGTGTCGGTGTCCCGGTCTTCGCGGTCATCTTCCAGCAAAAGAAAGCCTCCGGATGAGCTCACATACCCTCCCAGGGCCTACTTATTGGACCTATTTTGAATTTAGCATTTTGTGAAGCCAAAGCTGTCACTTCACTTGACTCTTGTTGTTTCGTGTTACTCCATTTGCTGTTAGCAGATGATCTGAATCTGTAAGCTCGTTTCTTTACGGCACTGCTTTTCTGTTAATAATACAAGTGGCT | |||||||||
gi|222362021|gb|GH725529.1|GH725529 G118.113F14F010716 G118 Triticum aestivum cDNA clone G118113F14, mRNA sequence CGGCGGCGGTGGTGAGGACTC EST sequence (targeted fragment marked with yellow): CCACGCGTCCGGGAAGGCCGGGGCGTTCATCACCGGGCACTACCACCTGATCCATCCACCCACCCACCCAGGGCCGCACACCGCCGCCTCACCTCCTTTGTCCCCCTCCCGCCAGCTCCACGAGAAAAAGGTAGACCACGCCACCGCCGCCGCCGCCGCCGCTGTCATCGCCGGCTCCGCCTCCTTCCCGCCGCCGACTGTCCCGACAACTCCCGCAAGAATGGGGAGCACCGACGAGACTGGGACTCCCTATGGCGAGTACACCTATGCTGAGCTGGAGAGGGAGCTGTACTGGCCATCCGAGAAGCTGAGGATCTCGGTTACTGGAGCTGGTGGTTTCATTGGATCCCATATCGCTCGCCGCCTGAAGAGTGAGGGGCACTACATCATTGCCTCTGACTGGAAGAAGAACGAGCATATGACCGAGGACATGTTCTGCCATGAGTTCCACCTTGCTGACCTCAGGGTCATGGACAACTGCCTTAAGGTCACCACCAATGTCGACCATGTCTTCAATCTCGCTGCTGATATGGGAGGCATGGGCTTCATTCAGTCCAACC | |||||||||
gi|143801605|gb|CJ967526.1|CJ967526 CJ967526 Y. Ogihara unpublished cDNA library, whchul Triticum aestivum cDNA clone whchul7l18 CGGCGGCGGTGGTGAGGACTC EST sequence (targeted fragment marked with yellow): CCAAGCTCCACTGCTCCGCTCCTCCCCTCCGTCTCCCTCCCAAGCCTCTCGTCTCCGACAGATCAAGGAGGCCAGGAGCAGCAACAAGATCAGCAGCTCGATTGGGCAGGCAAGCGGCGGATGGAGTTCGTGCTCATCATATCCCTGCCGCTCCTCATCCTGATCCTCATCATCGCCGTCGTCCTCTGCATCGTCTGCCGCTAGCCACATGCCGACTCGTCTCTGCTCGGTCCGCTGTGACTGTGGTCGCACCATATGTTGTGTTAATCAATCCAATATTACATCATGACTCGGCATAGAAAAGAAAAGAAAAAAGCTCCTCTCCACCACCATTTCTATTTTTCTGTTCTGTCACTGTGGTGTGATTAGCTGGCTATAGCTTTATTGGCTTTCCTGATGGCAACAAAAGCATCGATCCCGTGTGTCGATGCGCAATGCATATGATATACTATGTGGCTGTAAAAAAAGAACAAATT | |||||||||
gi|222363277|gb|GH724269.1|GH724269 G468.110A17R010929 G468 Triticum aestivum cDNA clone G468110A17, mRNA sequence CGGCGGCGGTGGTGAGGACTC EST sequence (targeted fragment marked with yellow): CGCCCGGCGCCGTGGGGCCGCGCGCGTGTGGAAGGGCTGATGATCGTGAAGAGCATCAGCTGAGGAAGTGGGAGAGGATGTTCCGGGGCTGGGCGAGGTCAGGTTGAGGGCGTCCTCGCCATCGCCGTCGACCGCCACGACGCGGTCGATCTTGACGCAGACGTCGTGGACGTGGGGCACGAGCCCGTTGAACCGCTTGGACGCGGCGGAGCAGCGGCCGAGGGAACGCACGTCCTCCACCTTGTTGAGGATGAGCAGGACGAGCGAGTCCGGCAGGCAGTCGAACAGGTCGAGCTCGAGCTCGAGCGCCGGGTCCGCGTGGATTCGGGCCTGGGAAGCATCGCGCCGCCGGAAGGTCACGCCTTCTGGCGCCGCCCGCCCACCCACCCCGCGGAACAAACGGCACCAAGATTGCCGGGAATGGGCAAGAAGAACAGGCTGCTCGACCTTGGCTCTTCGGATGGCTCGCGCAATGGCAGCAACCGCCCGCCAAATCGACGCGACGCGACCGCCTCAGCCGCCGGTCGCCACC | |||||||||
gi|222363696|gb|GH723778.1|GH723778 AZO4.105B17R011123 AZO4 Triticum aestivum cDNA clone AZO4105B17, mRNA sequence CGGCGGCGGTGGTGAGGACTC EST sequence (targeted fragment marked with yellow): AATATCTGACAATCACCACCTTAATCTTGTCACAAGAACTCGTCAACTTGCCAAATCCTCGAAGCAGATCATCTGCAAGCTCTTGCCGAGACTTTTCAGCACCAACACCACACCACCTTGCCTCAGGCTGCAGGTTCACCATGCCGCAGCATTGATCTCCACTTGCACGTTCTTCAGCGGCATCACACCACTGGTCACGTGCGTCTTGACGTCGTCGTCGGAGCAGCTTTTCTTGGGGATGGCATCACATCACCCAGAACACCACCATCGGCTAGCTTCACATCGATCCTCCTGATGGCCTCGCCCGCCGTACATCTTCTCCGCAGCATCTCATCACCGTCTTGTCGGCATCCCACCGTCGTCGTGGCAGCGTAGCACTGCCGTCTCCTCCTAGCGGCATCACACCGAAACCACCTGTTCGCGCGGCATCACACCGGCGAACACCTCCTTATCGTGGACGACGCCGTCGCAGCACCGGACACCACCGTGCACCATCTTGTCGTGGTCGACGCCATCGCAGCGCCCATGACCACATCATCCTGCCGCACGCAACAGCCACCTCTTGACATGGACGGCGCCTTCGCAACGCCGATCACCACGCCATCATCACCTCGCGCCGGGGTCCTCCACCTCACATGGAGTCCACCGCATCGCCGCCGTCGCAGGCCGTTGCCTCCGCCAGCGCCAAGACAGCCAACATAGCCGCCGACACCACCGTCGCCGCC | |||||||||
gi|143801894|gb|CJ967815.1|CJ967815 CJ967815 Y. Ogihara unpublished cDNA library, whchul Triticum aestivum cDNA clone whchul8l18 CGGCGGCGGTGGTGAGGACTC EST sequence (targeted fragment marked with yellow): CCAAGCTNCAGTGCTCCGCTCCTCCCCTCCGTCTCCCTCCCAAGCCTCTCGTCTCCGACAGATCAAGGAGGCCAGGAGCAGCAACAAGATCAGCAGCTCGATTGGGCAGGCAAGCGGCGGATGGAGTTCGTGCTCATCATATCCCTGCCGCTCCTCATCNTGATCCTCATCATCGCCGTCGTCCTNTGCATCGTNTGCCGCTAGCCACATGCCGANTCGTCTCTGNTCGGTCCGCTGTGACTGTGGTCGCACCATATGTTGTGTTAATCAATCCAATATTACATCANGACTCGGCATAGAAAAGAAAAGAAAAAAGCTCCTCTCCACCACCATTTCTATTTTTCNGTTCNGTCACTGTGGTGTGACNTAGCNGGCTATAGCTTTATTGGNTTTCCTGATGGCAACAAAAGCATCGATCCCGTGTGNNGATGCNCAATGCATATGATATAGCTATGNGGCTGAAAAAAAGAACAAATTCCG | |||||||||
gi|222365042|gb|GH722776.1|GH722776 AZO2.121A02R000000 AZO2 Triticum aestivum cDNA clone AZO2121A02, mRNA sequence CGGCGGCGGTGGTGAGGACTC EST sequence (targeted fragment marked with yellow): AGATAAAAGTTTCTCACAGTGAAATATCTAGTCTCCGCGTTACATAGCACACACCTATGTAATGAAGCCCTTTATTAGTGGTCCCTAATACATGGAAACGTAAGAACAAAACAAATGCAAATAGAAAAAAGCGAACGCCAATAGCTGGGGCTCTGGCTCGGTTTGGATGGCACGAAGAGGCTTCAAGGGTTGGCGTCACCGTATCCGTTTCCACGGCCGGTGCCACCACCGGTTCCACCATTTTTACCACCGCCCTCGCCGCCACCATTACCAGAAGCATTGGCATTGGTGTAGGAGGCATCACCATCATTATTCGCCTCGCGGGATCCAGATCCAGTGCCGCCACCGGTCCCAAAGCCACGGGGGTCAGCAGGGCAGTCGTCATCGTCGTCCGCCTCTCCACCACCGCCGCCGCCACCGGAACCACCGGCACTGGTACTCCCACCATCACCACCATAATTGGATGATCCTGGGCTCATCGGGCCAGAGCTTGAGCCGCTACCGGACCCAGCACCATACCCAGCACCATTAAACCCTGACCAACCACCCCCGCCGCCGC | |||||||||
gi|239860676|gb|GR302969.1|GR302969 WRIS_1002 cDNA library of a compatible interaction between stripe rust (Puccinia striiformis CGGCGGCGGTGGTGAGGACTC EST sequence (targeted fragment marked with yellow): GTACCCGGGATTCGGCCATTACGGCCGGGGGGGATCTCGCGCGGGGAGAACGCCCTCCGCTGGGGCTTCATCCGCAAGGTCTACGGCATCCTCTGCGCGCAGCTGGTCCTCACCACCGTCGTCTCCGCCATCACCGTCTTCCACCCCACCCTCAACGCCACGCTCTCCAACTCGCCCGTCCTCGCGCTCGTGCTCGCTGTCCTCCCCTTCATCCTGATGATCCCGTTGTACATCTATCAGCACCGACACCCTCACAATCTCGCTATCTTGGGTTTATTCACTCTGTGCTTGAGCTTCAGCATTGGTGTGGCTTGTGCAAACACTGAAGGAACTATTGTGCTTCAAGCATTGGTACTGACCTCAGCTGTGGTTGTCTCTCTGACTGCATACACATTCTGGGCCGCAAAGAAGGGCAAGGAATTTAGTTACCTTGGACCATTTCTGTTTTCTGCTCTCACCATCCTGGTCGTGATAAGCTTTACCCAGATCTTCTTCCCATTCGGACCTGCATCGAATTCTGTGATCGGCGGGTTTGGAGCTCTAGTCTTCTCAGGCTTCATCGTCTACGACACCGAGAACTTGATAAAGCGCCACACTTATGACGAGTACATCTGGGCGTCTGTTGAGCTTTACCTCGACATTCTCAACCTGTTCCTGACCATCCTACAGATGCTCAGGCAGAATGACAACTGATGGGTCCTGTCTGAACCACAGGGAACCTGTGCCAACCCAGGCATATGTCCTACATTTATCAAGTCT | |||||||||
gi|222369358|gb|GH731194.1|GH731194 GR45.111E04F010418 GR45 Triticum aestivum cDNA clone GR45111E04, mRNA sequence CGGCGGCGGTGGTGAGGACTC EST sequence (targeted fragment marked with yellow): CCCCCCTGCGCCGCACCCCGCGCCGCGCCTGGGCCGCCGCACGGCTCCTCCCTTGGGTCTCCCCCCCGCGGTCTCTCCAGTCCACTCCTCTCCTCACCACCGCCGCCGAGGATGGCCGCGTGCGCCGGGAACAGAGCCGGGTGAAAGCGGGCGAGCGGACCAGGGAGGGAGCCCACCCGCGATGGCCGCCACTGCAGGCGGCGGCGGCGGCCCGTGCTTCTCGATCCGGGGGTACGCGGCGCGGGCGCGGGCCGGCGCGGCGGACGAGGGCGGGAGGTGCTGGCCGCTCGGCGGGCCGCCGGAGCCGCTGCCGCCGATGGAGGTGCGGCGGTTCCGGTGGTGGGCGGACGAGGCGGCGCTGGCGGACGACATGGACGACGGGGAGGAGGAGCGGAGGAACGCGGCCATGCGCCGGAAGCGCTCCGTCGTCGAGCTCTTCGCCGCCGTGCCGCGGGTCGCCGGCGACGACGGGAGGAAGGTGAAGAGGAAGCTCGACAAGGGGAAGCAGCCGGCCGGGGCCCAGGCCAATAAGGGGCCCAAGAAGGACAAGGCCCCGGCTGAGATTGCTGCGAGTGCGAGGACCAAGGATGGTAGGTACGCTTTCGTCATGCAGACCATGCGCAAGTGGTGGCAC | |||||||||