| mature miRNA: CGTTGGCAGGTTGTTCTTGGCT species: Populus trichocarpa database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|73885928|gb|DT488666.1|DT488666 WS02537.B21_B07 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02537_B07 3', mRNA sequence CGTTGGCAGGTTGTTCTTGGCT EST sequence (targeted fragment marked with yellow): CCAGTATCTCCCCTTCTAAGAACAATTTCAGGGCGAAGGTGCCCCGGGAACCTGCATTACCCACCCGGACACTTGGTGGGGGCTTCATGAGTCCAAATATGGGTAAAGCTGTCGGTGACATAGAAATGGGTAGGAAAACTGTATGGGGAGACATGAGTGCTATGGCTGATGGCGAAGGACAACCTGCCAACAATGATCGGTTGAACATAAAAGATGGTGAACTAGGGGAGTTATCCCCGGATATCAGGACCCCAGTAGATGAAGTTGGGGACCGGGGTGGATTGCATCCTAGGCGATCGAGTTGGGGAAGAAAAAGTGGAAGCTGGGAGATGTCCCCTGAAGTTCTTGCTTTGGCAGCTAGAGGGGGGGAATTTAACCTTGTGGGGGGGGGGAGCAGCAGGGGCAGCTTAACAACTGAGAACCGACAATCATAGTTGGGGATTTGACCTCCATCCAAACCTAGGAAATGGAAGATTAACTGATTTGGTGAGTGCTGGGGGGGATTGCTGACCAAATGGTTGGTTATTCAACTTCCGAACTATATATTATGTGGAATATGGGGAAACTTTAGAGGGGGGGCTTGAAAGTTTTTGTTGGTTTGACCATTGTGCTTTTAGGGTGTGGAATGGAATGGTGTGTTGTTAGTACGAGTGAGCTATTGTCAGTTTTTATTTTTGTATTTTTGGAATTAGTTAGTGTTCAATCTCATTTTATTTGAGGAATCAGTCAGTGTTTTCCTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAAAAAAAAAAAAAAA | |||||||||