mature miRNA: CTCACAGTCTGCATGGCTCTC species: Physcomitrella patens database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
Predicted miRNA targets | |||||||||
gi|208397117|gb|DC908131.1|DC908131 DC908131 ppaa full-length cDNA library; antheridia and archgonia Physcomitrella patens subsp CTCACAGTCTGCATGGCTCTC EST sequence (targeted fragment marked with yellow): GCGAATTGCTCGACGTGCAATGGCCATGGCGTCTGTCTTCCTGCCGCCGGTCTCAAGTAGCAAGGTTACGCTAGGTGATTGCGTTGTGTCAAGTACACAGCACCGTCCCATGTCTTTATTGTCCAGAGGATTATTTGGCGCTGAGGTTCCGGGAAGCAGTATCTGTAGACAGGAGTTATGGCGAGGTGGTCTGGAGCGGAGAACGTCGAGGCGGGAGAGCGGAGTGGTTGCTTGTGAGGCGAAAAATGAAACGAAAACGCCGCCCACTGCGGATGCCAGCCCTCTCGTGAAGATGGTGTGGTATGGCAGCGAGGCGTTCGGGAAGTTTGTGGCTGCATTTCGACCTAGCGCAACCGTCGAACCAGAAGACGAGGAGATGTTTGTCGGCCCCGTGCCTAGGAGTGAAGTTGTTGACCTCATAAAGAAGGATTACGAACGTTCTTACTTTGTTACAGGGAACATGACTATGGGTATATATGAAGCCGACTGTGAGTTTGCGGATCCCTTTGTAGCATTCAAAGGTCTGAGGAGATTCAAGCAGAATGTGAGCAACTTAGGATCATTTATGGAGGAATCTAGCTTGAAAATCACAGATTGGCAAGAATATGAGGACAGGGTGTATGCCCGGTGGCGATTCAATTGCATCCTGGGACTCCCCTGGCGTCCTATTTTGGCAGCAACTGGAAGCACAGAATACTTCTTTGATAGCAATCCTGGAAAGATTTGCAAGCACGTCGA |