miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse




mature miRNA: CTCCGTTCCTAAATATAAGCC
species: Triticum monococcum
database: miRNEST
The numbers on the right side of the alignments show a score calculated for them.
When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5.

Predicted miRNA targets
gi|13116024|gb|BG314221.1|BG314221 WHE2460_G07_M14ZS Triticum monococcum early reproductive apex cDNA library Triticum monococcu 

CTCCGTTCCTAAATATAAGCC
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GAGGCAAGAATTTATGTTCAT

EST sequence (targeted fragment marked with yellow):
AGTGATTTTACACTCTAAAATTGCCTACGTACATCCGTATGTTGTAGTCCATTTGAAATGTCTAAAAATACTTGTATTTAAGAACGGAGGGAGTATTTGGTTGTGGTAATATAGAATTGAAATAACTTTGTGTTAAAAAAAAAAAAAAAA