miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse




mature miRNA: CTCCGTTCCTAAATATAAGTC
species: Leymus cinereus x Leymus triticoides
database: miRNEST
The numbers on the right side of the alignments show a score calculated for them.
When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5.

Predicted miRNA targets
gi|159760850|gb|EG385253.1|EG385253 BG01025A1B08.r1 BG01 - normalized library Leymus cinereus x Leymus triticoides cDNA clone BG

CTCCGTTCCTAAATATAAGTC
|||||||||||||||||||||
GAGGCAAGGATTTATATTCAG

EST sequence (targeted fragment marked with yellow):
GCATTTTTTTTTTTTTTTTTTCTCTAAAAAGACTTATATTTAGGAACGGAGGGAGTATATATAATGCATGTCTGCAGCTCCAGGGACGACAATGCGAGAGCAAGATCCAGCCTAACACAAAACTAACTAGCTGACAGACACCACGACAAGCTGGTAAAACAAACATTGAGATGAGCTCCAGGGCCAAATGAGGGCAACCAAATTTTCATTTCGTCCTCGACAGGGAATAACAACCGGAAAGGAAACTACATAACACTTAGCAGTTCATACTACAACCACGCCCATCACAAGACACGAGACGTCAAAAGCAAAACAATGCAACACCCCATCGACCGATCGATCTAATCCAAATCCAGACAAACACATGACATGGCCACAGGCCCAACAGATCCTTATTGCTCTTCTTCTTCATGATCTTCTTCTTCATTACCACCGACCTTCAGGCGCCAAACTCAAATCAGCAGCAGCCCTCGACAGGCTCGCCAAATCCCAATTCGGAGAGCTTGAGGTGTGCCTCGGCATAGTCAGCAAAGAAAGCATCCTCATCCGCAGCATATTTGTCCACAAGTGGGCGGAAGGCCGGGTCAGTCAGGAGAGTCTTGTCGGTCGGCAACTGAAGAAGGCCTTCCTTCTCCCCAGTAAGGAGCTCAGTGAAGTAAGAGTTGTCGANNNTCAAAGGGTTGGCGGTCCAGGCTCCCTCAAAGCCGGATCTCTCC



gi|159768824|gb|EG391953.1|EG391953 BG01027A2G02.r1 BG01 - normalized library Leymus cinereus x Leymus triticoides cDNA clone BG

CTCCGTTCCTAAATATAAGTC
||||||| |||||||||||||
GAGGCAAAGATTTATATTCAG

EST sequence (targeted fragment marked with yellow):
CGATTTTTTTTTTTTTTTTTTGACCAACAAAATGGAACAAGTTCATATGTACTCCCTCCGTTCCTAAATATAAGTCTTTATAGAGATTTCATTGCGTACTACATACGAAAAAATGAGTGAATCTACACTCTAAAATACGTCTATATACATCCGTATGTAGTCTTTATTGAAATCTCTAAAAAGACTTATATTTAGAAACGGAGGGAGTATTCACCATGTTCGACCACCACAGGAACCAACAGTTAAAATACACGGAGCACCGATTTTCCAGCCACTACAGTACTGAGACACGACTTAACTAAGACTCGTCCTGACTTATCTAGTTTTTATTGCCAACACAGTTATACAACCATTGTAACTTACAGGCTCCCCCACCTACTTGTATACCACCTGAGTACAAACCCTGGACCCAAAAAGCAGCTACACATAATTATACAAGAAAGAAAAACTCGAATACCCAAATTATCTGCAGCAATGCATTGTATGAAGAGCACCCCCGGCGTTGTACAGATCAGATTAGGGGAAATCCGGCGCGCGATGATCCTTGGTTATTCCCTGGGCCTAGCAAGCCACAGAGAGCTCAGCGCGCGCAAACGCGAGAAGTAGTCATGTATAGCTAGGAGAGCACGGGAGGCCTGACGGATCGTCAAGATTCGCTGCATTTGATGCAAGGTCTGCTGTCGCAGGTTGTCAGCCTGGCGANNNAAGTTCTCGAGTGTTCCAAGCTTGCCCATGGACATGGCCATCTGGCCCATGTAGTTTGCAACATTCCCTGAAGAACCAGAGNAGGAACCCAGAGATCCAGCCAAAGTCTCTGCCAGTGATTGCTGCAATGCTTCCATCCC



gi|159755030|gb|EG395156.1|EG395156 BG01036A2C07.r1 BG01 - normalized library Leymus cinereus x Leymus triticoides cDNA clone BG

CTCCGTTCCTAAATATAAGTC
||||||| |||||||||||.
GAGGCAAAGATTTATATTCGA

EST sequence (targeted fragment marked with yellow):
CGATTTTNNNTTTTTTTTTTTAATAACAGAACACAAATATATATGATATGTTTCCACCGGCTGCTGCTACACATATACTCCCTCTGTTCCTAAATATAAGCCTTTTTAGAGATTTCAATATAGACTACATACGGAGCAAAATGAGTGAATCTACACTCTAAAATACGTCTATATACATCCGTATATAGTTTGTATTGAAATCTCTAAAAGAGCTTATATTTAGAAACGGAGCGAGTATTGGTTATTTGTAGTCATATCTCATATCTCGATCGTATAGCCTATAACCCACTAGAGCGTGCGATGGTTGTGTGCATCAGTCGATGCAGATGCAGGGATTGAGTGTCTACGGTATAATTGATGGAAATCTTCCGGAATTCCAGTGAGCACATACATACGTCGCCGGGCTTATCTCCGGCATCTCACGGTTCTCTTTAGTGAAGTAATTAGGTGGTGATACTTGGTAGTACTACGTATAGTAGTATTGATTGAGTCGATGATGCATGCACATGGCTGATCATTAGTTGGTGATGGGGATGATCCTGCCGTTGGCCTTCTTGCCGTCGTCCTTGGGGATGGTGATGGTGAGCACGCCGTTGTCGAGCGCGGCGTGGACGCCGCCGCCGTCGACGTCGGCGTTGGGCGGCAGGCGCACGGTGCGCACGACCTTCTGGGCGCTCCGCTCCACGCGGTGCCACCGGTCGCCCTTGTCCT



gi|159669486|gb|EG400820.1|EG400820 BG01039A2D06.r1 BG01 - normalized library Leymus cinereus x Leymus triticoides cDNA clone BG

CTCCGTTCCTAAATATAAGTC
||||.|||||||||||| |
GAGGTAAGGATTTATATAAAT

EST sequence (targeted fragment marked with yellow):
CAGGCTCTACTATCATACACCAGTTTCCAATCTCCAGGGGATACCTTATCAGGAACGCAGCAACATCACTCAAATTCAAAGAAACTACACCACAGTTGGAAAAACATTTTGACACAAGTCGGGAACAACACACTCGAAGCTCAGTCTTTGTTTTGAACTGTGGAGCCATCATGCGATGATGAAAGGGAGCACAGTCAACATGAATGCCTCGTAACTGAAAGTTGCAGACCCGGAGTAAGCCGTGTCCTTCTCCTTGAACTTCTCAGTCAGACCCTTGACTGTAAGGCAACACTCAATAAAGTTATCATATTCGACTGCTTTGCTCATGCCCCCAGTCTTGTCGAATTTAGACACGAGCAAGTCTAGCACAGTTGGAGAAACTGAATAACCCAGACTGAGAAGAGCATCGCGCAGCTCCGATGCATCAATTTTACCACTTCGGTCACGGTCAAACCTCTCAAATATAGACTGCACAAAAACAATAGGAAATGGACAGGCATGGTTAATAAGTACTACCTCCATTCCTAAATATAAGACGTTGGGGCAGTTTAAATATATTTAGGAATGGAGGTAGTATTTCA



gi|159756176|gb|EG381983.1|EG381983 BG01001X1H03.r1 BG01 - normalized library Leymus cinereus x Leymus triticoides cDNA clone BG

CTCCGTTCCTAAATATAAGTC
||||||| |||||||||||.|
GAGGCAAAGATTTATATTCGG

EST sequence (targeted fragment marked with yellow):
CGATTTTTTTTTTTTTTTTTTGAAATCTTTAAAAAGGCTTATATTTAGAAACGGAGGGAGTAGTAACATCAGAAACAGTACGGGTTCATCCACATCTTCTCTAAGCCTTGCTTTAATCAGATGAAATTAGCACAGTACGTATGAGGTAGTCATCACTTAAACTCCTCAACGTTGACCTCCTGTTTCTTGTTCTTCCCTTTCTTGGCCTCCTCCTCTGTAACTGTACCCTCCACCATTTCCCCTCCTTGGTCGCTCCCATCGGCCGCTGCCACGACCGGCGCCACCTTGAACTTGGCGTAGATGTCACCCTTGTAGAAGTTTCTCGTCCTCCACACCAGCACCAGCGACACGAGCACGCCGGCGAGCGTCACTCCCGTGATGATGAGGAACGCGTGCTTGAAGCACTGCACCCCCTTGCAGATCTTGTCGCCGACGGCGGCGTGGCCGCCGTGCTGCCTGGCGGCCTCGGCGTCGTACATGCGGCCGGCGATGCGCACGTTGAGCACGTAGGCGCCGATGGGGCTGGCCGCGGAGCCGAAGTTGAAGAGCGTGGAGTAGTACTTGAGCCCGAACACCTCGGNNATGATGGAGAATAGCAGCGGCCACTGCGCGCCGAAGCAGAAGCCGAGGATCACCGACGCGGCGT



gi|159758270|gb|EG380774.1|EG380774 BG01012B1B03.r1 BG01 - normalized library Leymus cinereus x Leymus triticoides cDNA clone BG

CTCCGTTCCTAAATATAAGTC
||||||| ||||||||||||
GAGGCAAAGATTTATATTCAA

EST sequence (targeted fragment marked with yellow):
GCATTTTTTTTTTTTTTTTTTCGTTAAGAGCTGGATCCGTAATTTAATTAATCAATACAGTATTGCTACTAATTAACAGAAGTAGTACGTGTACTTGTACAGCGGTGGGGTAATTAGTCAACAGGATTCTACTCCCTCCGTTCCTAAATATAAGTCTTTTTAGAGATTCCAATATGGACTACATACGAAGCAAAATAAGTAAATCTACACTCTAAAATACGTCTATATACATCCGTATGTAGTTTGTATTGAAATCTCTAAAAGAACTTATATTTAGAAACGGAGGGAGTAGTAGGCTAGCTGGTTAATTCGCGCCTCAATGACGCGCAACAGAAAAATGCTTTCCCCGGATGCTTGAGCGCCGGCCCAAGGATTAATTACCACTCCGGCGACTCAGAACTGCTCGAACAGCTGGTGCACGTCCGGCGACGCCTTGCCGCGCTGTTGGTGCAGCGCTGCCGGCGGCGGCACGACGGGCGGGGACGACGACCTCAGCAGCGCGAAGTTGAGGCCCTTGAAGAACGGGTGCGCCTTCACGTCCGCGGCACCGCGCCGCGACCCCAGGCGCGCCCGCGGGTCCTTGTCCAGGAGCCGCGTGATCAGGTCCCCCGCCGCGGCGGCCTCCGCGTGCGGCGTCCCGGCG



gi|159771569|gb|EG398663.1|EG398663 BG01029B2H09.r1 BG01 - normalized library Leymus cinereus x Leymus triticoides cDNA clone BG

CTCCGTTCCTAAATATAAGTC
|||||| ||||||||||..|
TAGGCAAAGATTTATATTTGG

EST sequence (targeted fragment marked with yellow):
GCATTTTTTTTTTTTTTTTTTGAAATCTCTAAAATGGTTTATATTTAGAAACGGATGTAGTTATTAAAAATAAGAACTGCCCAACTCTTGACACGTCAGGAATACATATGTTCTACATTGGTGCTATATATAGCCCGCGACCCGGAGCGTTAACAGCGGCGAAGGATAGTAAATTACTATATTGCAATGTTGGACTAGTAATAATAACAAAAGAAAAGGCCCTGGTGAGGCTTCATCTACCATATACGTATATTATTAGGAAGGAGGAGGGTGTTGTAGTCCCTTTCATCGCCGGCATACTTGCTTCATACAGTCATCACTCAGTAGTACATGAGCTGCTGCTGTTGCTGCTGCTGCTGAGGGTTGACACTCTGGAAGCCCCCGTCATAGATGGCCTGGCTGGCGCCGGTGCCCATACCCATAGCGGCCTGCCTCAGGGCGGCGTGCTGACCCATCAGGGCCGGGTTGGCAGCCATCTTGCTCAGGGCGAGGGATCGCTCGTACGAGATGAGGTCAGCTGCCGACACGCCAGGGGTGTATGGCGCTAATGCCGGAGGGGGCAGAGGCGCAGATGCTGTCCCTGGTGGAGTTGGTTTGCTTCCCCAAGAGCACTTGATCTGCCTCCCGCCAATAAGTTGGCCATTACCCGTCTGTATTGCTTGTGAAGCTTCTTCATGGGTACTATATCTCACAAAGCCAAATCCTTTATCGCGTGTTACACGGACCTCCTCAATTGATCCAGCCCCGAGTAAATGGAAAAATCGATGCACATCATTGCTGT



gi|159732968|gb|EG377405.1|EG377405 BG01007A2A12.f1 BG01 - normalized library Leymus cinereus x Leymus triticoides cDNA clone BG

CTCCGTTCCTAAATATAAGTC
||||||||||||||||| .
GAGGCAAGGATTTATATATTC

EST sequence (targeted fragment marked with yellow):
CGCACCTTGCCAATTTGGCATCAAGTTTTGGCCNNNACACGTCACCTGTACTTTTGCATTACAACACGCATACTCCGGTAGGTACTCAAGTACTCCTCCGTACTATAGTTTGTTTGAGGGGATGGCAGTTTCTGTTAGAGAAGGCAATTTTCGTTTTTAAACTGCCATCGTTTGACCTCGTCTCAAAACTAAAACTGTCATCAAAAAGGGTTTGCTTGCCACCCCTTTCCCAGCGATCGGTCGCCAGTTAACTTTTCTGATCTTAATTACTGCTCTCTCCGTTTCTAAATATAAGTCATTTTAGAGATTTCAATACGAACTACATACGGATGTATATAGACGTATTTTAGAGTGTAGATTCACTCATTTTGCTTCGTATGTAGGCCATATTGGAATCTCTAAAAAGACTTATATATTTAGGAACGGAGGGAGTAGTAGAAGCACCGCTAGTCCTGTTCTGCATACTACTAAAATTTGTTAGCTTTGTGGTCACAGGGGATACTACAAGTGTAGCAGCATGAAGGGCTGCATGGCCCGGAAACTGGTGGAGCGCAGCCCGGCCAAACCCGGTGTGCTCGTCATCACGTACATGGCCGAGCACTGCCACCCGGTGCCGACGCAGATCAACGCGCTCGCCGGCACCACCCGCCACAAGTCCACCCCTGCCGAGGACCACGCGACGACGACCACGACGTCGCCCAAGAGCCACGAGGCGGTGAGGTGCGAGGACGAAAGCAACGAGACGTCGTCGATGGCCAC



gi|158965798|gb|EG393150.1|EG393150 BG01043B1C09.r1 BG01 - normalized library Leymus cinereus x Leymus triticoides cDNA clone BG

CTCCGTTCCTAAATATAAGTC
||| ||||||||||||||| |
GAGACAAGGATTTATATTCTG

EST sequence (targeted fragment marked with yellow):
TTTTAGCATGCACGGTCATTAAACATGGGTCCCCNNTTAAACAATATATACTTATCTACATCCGGTGATCAGCACACAGCTTCAGCTGCATTTCTGGAATGATAACGAGATTATACAGAACAGTTAAGCATCAATCTTAGAGGTGCGACAACCACCACCGATCTTCTTCATATACATCTGATTTCATGCATATGTTCTTCCAGTGGCCAATGTTTCTATGCCTCCTGCAGCGAATAAAAGGTAGTGCCGATGACAGGATTAATAACTACATCCTCTGTTCCTAAATATAAGACGTTTTGGCAGTTTGAACTGCCAAAGCGTCTTATATTTAGGAACAGAGGTAGTACATTATTTTTATGCTTAGCATAATCCTTGATCGACATCTCCAATGCACTAGCTCTTGCTGGGTTCTTCTTCTGTTCCTCTGGAGCTTTGCTGATTCGCACCCTTCTTGTCCATCCACACACACTCCTTGCTAAAACTGCCACATCGCCCACACCTTCAGTTTCATCATCCGCTTCACTCTGGACTTGCTCGCCTCATCGCCCGGTAAATCCAGCTCGTTAACAGAAGATTGCGGAGGTGCACAGCCATTAGAGCAATCCTCCCCTCCAATCACACCCTGAGAGCAGTTCATGGACGNNNCCACTTCGACTTAAAACAGGGCACCACTGTCTTCCGCCTCCTGCTTGTATCGCAAATCCTGGACATCGGAATCTCCTGCAAGAAGGGAACCCACAACCTCCTTGGATAC



gi|158964839|gb|EG392980.1|EG392980 BG01043A1C12.r1 BG01 - normalized library Leymus cinereus x Leymus triticoides cDNA clone BG

CTCCGTTCCTAAATATAAGTC
|||||||||||||||||||.|
GAGGCAAGGATTTATATTCGG

EST sequence (targeted fragment marked with yellow):
GCATTTTTTTTTTTTTTTTTTGATGTAAACTGCCAACCAGACTGAAAACACAGAAGCATCGAGTACAGCATATACTCCCTCCGTTTCTATGTAGTCCGTACTGAAATCTCTAAAAAGGCTTATATTTAGGAACGGAGGGAGTAGCATTCATATGGTATGCAAGTCCAGAACCATGACGAAATACAGCTGCTTCACTAGGTGCACAACCATACCATCCACACTGTTTATAAACGTCCAAAGTTACTGAAATTCCAACATTACAACGAATATACGGTGGCTTGGCGCTTCGTAAAACATCAGGTGCTTGCTGAGGTTGAGCGCTCCCTGGAGACGGACCTCGAGCATGAACTACGGCTGTGAGCATAGCTTTCTCTAGAACGCCTCTTGCCAGGTGACCTGCTGCGCGATGGCTTGCTTTCGGCGTATCCTTTCCGCGGAGAACAGCTCCTTGATTCTTCTGACGCCGGGGAGCAGCTGCGGGAGTAGCTCCTGCGTGGCGATATGCTGCGAGAGTAGCTCCGCCTTCTGTTCCTTGGAGAATAGCGCCTGCTGTAGTATGCTGAAACAGAATGGTCGTGGGAGCGCGACCTCCGCCTTCTGTAACGGTATGGAGATCTTGAACGGTGGCGATGACCATGGCAGGGTGAGTAGGACCTACGCCTGTCGTAGGGTGAGTAGGACCTACGCCTGTCGTAGGGAGACTCCGATCTGTCGGAAGGAGAGTATGATCTCCTTCTGCCATAGGGAGAGTAGGATGGCCTCCTTTCATAGGGGGAGTATGATCTACGCCTGTCATG



gi|159749253|gb|EG379745.1|EG379745 BG01008A2C05.r1 BG01 - normalized library Leymus cinereus x Leymus triticoides cDNA clone BG

CTCCGTTCCTAAATATAAGTC
|||||||||||||||||||||
GAGGCAAGGATTTATATTCAG

EST sequence (targeted fragment marked with yellow):
CGATTTTTTTTTTTTTTTTTTAGAGCTTCCCGAGCTAGTATATATATTGACAACCCGCACTATTTACATTCTGTACTGATCCGAGTCCTGCCGACCTCCTTGTGTAAATAAATGTTAAATGTCAACTGAACCATAGGATTCGGGGTCAGTGCACCAAAAAGTTCGGAGGTGTGCACTGCACTGTACAGGACTTGAATTTGACAGCACACCTGTTTGCTAACTTCCCTTTGTACAGTCATAGTAAACTTTTTCAGCGGAATGCTGTTAATCAGTCGGTATGTTCAGACAGTATCCTCAGCGTGCATCTGATCTACCTGGCGACATCTCCAGGCTCCAGATTAGACTCTTCTAAAACCTTAATAACACTATATTGGTGAACGGTGACCAATCTCCCCCCAAGGGCAACAACATTCTCTTTGTTTTCTACTCCCTCCGTTTCTAAATATAGGTCCTTTTAGAGATTTCAATACGAACTACATACGGATGTATATAGACATATTTTAAAGTGTAGATTCACTCATTTTGCTCCGTATGTAGTTCATATTGGAATCTCTAAAAAGACTTATATTTAGGAACGGAGGGAGTATTAGCCAAAACAGTGTTCAAACTTCGCGGTTTCCAACATCAGGTATTGATTCCTGAATCGCTTGAGTAAACATAGCAATCTTGTAGGTAAAAAACCCAACGAGCATGGGTATCAACTCCAGGTGCATGAAGCCGTAATCTGGAACTAGTATCGCATTCCATCGATTGTACATCAT



gi|159781042|gb|EG382668.1|EG382668 BG01015A1A05.r1 BG01 - normalized library Leymus cinereus x Leymus triticoides cDNA clone BG

CTCCGTTCCTAAATATAAGTC
|||||||||||||||||||||
GAGGCAAGGATTTATATTCAG

EST sequence (targeted fragment marked with yellow):
GCATTTTTNNNTTTTTTTTTTAGCTGGCGCAACACTGAAATTTAACGAACTCCGAACTATCAATTTCATTCATCCCTTATATTATTCCACAAGCGGCCATTCAATCACAACGACTAATACATATGTACATGTTCATGGCTGCTTACAACAGCATCTGCGCTTGCTTTGCCTTTACCAGTCTCCGCCGGCCTATCAGCCTTGTCATGGCTGCTAAGCTGTTGCAGGCGCCGCCTCTGATTTCCCCCCAGCCACCCTAAGATGTCTGCCCTTTGTTTGTTGGGCTTCAAATAGGGCCCAAATCGTCGGTACTTCGGTCTTGGTTGCCTTTTAAGCTGTTATCTACTCCCTCCGTTTCTAAATATAAGTCCTTTTAGAGATTTCACAATACGGACTACATATGGATGTATATAGACGTATTTTAAAGTGTTGAATCAGTCATTTTGCTCCGTATGTGGTTCATATTGGAATCTCTAAAAAGACTTATATTTAGGAACGGAGGGAGTAGCAACTATCTACACTGCACAATGTCCGAATCCACAATGCAATTAGCTCAGATCGAAACCGGCTTCCGAGTTTATTGCATACAACAGTTTGGTTTGCAACTGCTCCTTCGTTCTGTAAGGAGGGAGCTTCAGAAGGTTCATGCAAGTAGCCGAGGTGGGCAAACGGTCTCCATGCTCCTCCAAGCCGGGGACACCAGCTCTTTGAATGCAGAATTTAGGATCAAGGTACTCAAATCCAAGGAGTGGCCCGCGAGAACATCCAGTCACAAACTTGNNNAACTTTTTCTGATTATCTGAACTGAAGCTCTTTAAACCTCCCACAACATATCGATAATCTCATG



gi|159741139|gb|EG380192.1|EG380192 BG01015A1A05.f1 BG01 - normalized library Leymus cinereus x Leymus triticoides cDNA clone BG

CTCCGTTCCTAAATATAAGTC
||||||| |||||||||||||
GAGGCAAAGATTTATATTCAG

EST sequence (targeted fragment marked with yellow):
TGTTGCCAACCATCGATTAAACTATCAGATCCGTGGACAAGGTAGACATTTTCTGAGAGGTTTTCAAAAACTTATACCAAAGGAATGGATTGATATGTTCAATGAACATGAAATTCAGCTTCTCATATCTGGCTCTCTGGAAAGTTTGGACATTGATGACTTGCGCTTAAACACCAACTATTCTGGAGGTTATCATCCGGACCATGAGATTATCGATATGTTGTGGGAGGTTTTAAAGAGCTTCAGTTCAGATAATCAGAAAAAGTTTCTCAAGTTTGTGACTGGATGTTCTCGCGGGCCACTCCTTGGATTTGAGTACCTTGATCCTAAATTCTGCATTCAAAGAGCTGGTGTCCCCGGCTTGGAGGAGCATGGAGACCGTTTGCCCACCTCGGCTACTTGCATGAACCTTCTGAAGCTCCCTCCTTACAGAACGAAGGAGCAGTTGCAAACCAAACTGTTGTATGCAATAAACTCGGAAGCCGGTTTCGATCTGAGCTAATTGCATTGTGGATTCGGACATTGTGCAGTGTAGATAGTTGCTACTCCCTCCGTTCCTAAATATAAGTCTTTTTAGAGATTCCAATATGAACCACATACGGAGCAAAATGACTGATTCAACACTTTAAAATACGTCTATATACATCCATATGTAGTCCGTATTGTGAAATCTCTAAAAGGACTTATATTTAGAAACGGAGGGAGTAGATAACAGCTTAAAAGGCAACCAAGACCGAAGTACCGACGATTTGGGCCCTATTTGAAGCCCAACAAACAAAGGGC



gi|159764755|gb|EG383676.1|EG383676 BG01018B2B06.r1 BG01 - normalized library Leymus cinereus x Leymus triticoides cDNA clone BG

CTCCGTTCCTAAATATAAGTC
||| |||||||||| |||| |
GAGACAAGGATTTACATTCTG

EST sequence (targeted fragment marked with yellow):
CGATTTTTTTTTTTTTTTTTTGAAACAAAAAACCTCNNNTGAACTCATACGTTGAACTGCAAAAACGTCTTACATTTAGGAACAGAGGGTGTGCTAAATAAGCTCACTGAACTCGTATGTCTCGTCGGTCTGTTACTGAGGGGAACAACCCGGGTGCTGTTTCGCACTGCAGTTTGATCAGCTATATCTATTGTTACCTATGTTTATATTCGTCAAGCGTACAAAAAAAAAATCATCATCACCACTTCTTTACATCTCCTATATACATGTAGATTCATGAGACACTGGCAACAACACCAAGCACATGGCTGTTTCCCAACTTGCAAAGTTCCACGGGAGCTCATCTGGCCACACATGCATCAGATGATCCTTTTTCCTCCTTTACCCACATCAATGGATCGACGAGCCATACTATATGCTTCTGCTTTCATTGACGAGTGCGTGCAATCCCAGCTTAACTCCAGTTCTTGCCTAAGCAAGTAGCAAGATTTCTTGTGTGCGTCAACTTCTTTGCATTGCTGAAATCCCTCAGTAAGTAAACCTTATCGGCAGGAATACGTGTAAGATATCGACATCTCCAGCTATCTGTCGGAGGCGATGGCTTCTTCGATCCTCCTAATGACAACGCCGAGACCATGTCCGCTTTCGAGTGCTTTGACGGCAGCTCTATGCGCTTTCTTGTGCCACTTCAGGAGGTTGTAAGACTGCATCACTGACCAGCGAGCTCTATTTGCCATCTGTGCGACAGAAAGCGGAGGATCGAGCAGAACACACAAACTCCTGAACAAATTCTCGTCATTTTCTCCTCCTTCTGCCTCCCCGTATACAAGTGCTTCTGCGGCGATTCCAGCAAACAGAATCATGCAGTATCTGTCAAATGCTGTAC



gi|159648378|gb|EG386069.1|EG386069 BG01020A1H05.f1 BG01 - normalized library Leymus cinereus x Leymus triticoides cDNA clone BG

CTCCGTTCCTAAATATAAGTC
||||||| |||||||||||.|
GAGGCAAAGATTTATATTCGG

EST sequence (targeted fragment marked with yellow):
CGACAGCAACGGTTTTTTTTTTTTTCATATTGAAATCTCTAAAAGGCTTATATTTAGAAACGGAGGGAGTACATCACAATGATAGAATAATTCAGCAGATACCTTTCAACTTGGAAAGAAGATTGTTTTCTAGAAAACCCTGGGTATTCGACCTTGACGAGTGTATCATGGCGATGAAACGACGCTCTCCACCTTGGGCACCTCGACTGGGAACCGGTGGATCTCCTCAATCCACGGGTTGCTGCCGGCTTCCTTTGACGGGTGAATGTCCTGGAGCGCGCGCCACACCGCGCTGTTACACTTGAACCCTGACCCGAAGGCGATCTGCCACGCACGGTGCCCGCGCCGGACGCGTCCCTTGGCCTCCGTGTACGCAAGCTCGTACCACAGCGAGCTGCTGGACGTGTTCCCCCACCGGTTCAACGTCATCCTTGATGGCTCCATGTGCCAGTCACTGAGCTCCAGGTTCTTCTCGATGGTGTCCAGCACTGCCCTGCCGCCGGCATGGATGCAGAAGTGCTCGAACGCCATCTTGAAGTCCGGAATGTAGGGCTTCATCTTGAGACCAAAGATCTTGTTGGCGATGAGAGAGGTGAGGAAAAGGATCTGCTCGGACATGGGGAGAACGAGGGGCCCGAGCGTGGTGATGTTCGTCTTGAGGGCCTCGCCGGCGACGGCCATGAGGTCCTTGGNNNGCGCGACACCAACCCGGCCAGCCTTGTCCTCCTC



gi|159755860|gb|EG388518.1|EG388518 BG01025B2D04.f1 BG01 - normalized library Leymus cinereus x Leymus triticoides cDNA clone BG

CTCCGTTCCTAAATATAAGTC
||| ||||||||||||||| |
GAGACAAGGATTTATATTCTG

EST sequence (targeted fragment marked with yellow):
ATGCNNAATCACAGTGCTGCACCATGAGGACAATGGTATGAACATCGAGATGGCAAAGCTGGCCTTTTCCAAGGGCATCTGGAATTATATTTGTAAAATGAACAATGCTTTACGCCGGTATCCTCAGCACCATGGTCCGTCAATATCAATTTTGACCATGCGAAGACTTACCAAAAAGTTTCCCCAGGACTTACAGAACAACATGGATGAAAGCAATCGATCTCCAGTGAATACAGTACCCACTGTTGCTCCTTCTACACATTCATCTGGAACTTCTCCCTGCAAGCAGCTAGGGAAGAAGTCATCACGGGAAACGATTGCAAGTGGACTTTTGCTAATTGGAAGCATCGTCTGTCTCTCTAAAGGCCGATCTAACCTCGGCGCTCAGCTTGCCATGGCATTCTTCCTGAAGAAGGCCTTTAAGAAAGACAAAGAATCAGGCTCCTCACCGAGGGGAAGAACTGAAGCAACGATGCCCATGCACTAGTAGTAGACTGGCTTAAGCTGCTGATACTACCGTTTTGTCCTTATTTTAAGCAAACTGAGTACTTACTACTAACCTCTGTTTCTAAATATAAGATGTTTTTGCAGTTCAATTTGAACGGTAAAAACGTCTTATATTTAGGAACAGAGGGAGTACTTACTTGAAATTGAAAACGCATGATTGTACAGTGTTTTTGAGCGCAAATTATGTAAATGTTAAATTTTGAAATAACTTTTATTCCCATTTAGCATGGGTGATATTCAGTTGTTTTTCCTCAAAAAAAAAAAAAAAAAATGC