| mature miRNA: CTCGAGCCAGACAACATTCCT species: Populus trichocarpa database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|73889051|gb|DT491789.1|DT491789 WS02548.C21_M15 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02548_M15 3', mRNA sequence CTCGAGCCAGACAACATTCCT EST sequence (targeted fragment marked with yellow): GTGCATTTCATGTGCAAATTCATCAGTTATTTCTTTCTCTCTTTGTTTATTAGAAGATATAGCATGAGTTCAGTTTCGTGAGGGTTAGGTTGAGAGGAATGTTGTCTGGCTCGAGGTCATTGAGGCCATGATTATACAGACATGGCATTACCTGATGACAGCCGAGAAAATTCAAAGTCTGTGTGTATCTTGTACCTCGATGATTCTCGGACCAGGCTTCATTCCTTCCAACAAACATTTGCTACAATTTCTTAAAAAGCCATCTCATGATTCTCCTAACTACAATTCCATAATATCAACTTCTGGTGAAGTTCTCTCTCTTTAACTTGTTTACTGTTCTCTTTTCTCTATGGTTGCAATTGTGTGTGTACATATGAATCTGAAGGTCTATCTATGTAATTTTTTTTGTCTTCTGATGAATATCTATGTCTTTATTGTCTTTGGTTGTAATTTCTACAGGTTGCTAGCTTAGCTTTTCTTTAAGTTCCATCTCAGCTATGTGGTCAATACTCCTAAATACAACAAAGGTAAGCTTATATAACAACTATCTCAGACCTTGGATGAGCATAGCATCTCTCTCTCTCTCTCTTAACGCTCCAAAAAAAAAAAAAAAAAA | |||||||||