mature miRNA: CTCGTTATCCTAACGAGCCAG species: Saccharum officinarum database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
Predicted miRNA targets | |||||||||
gi|36021505|gb|CA284265.1|CA284265 SCSFSD1064D03.b SD1 Saccharum hybrid cultivar (mixed) cDNA clone SCSFSD1064D03 3', mRNA seque CTCGTTATCCTAACGAGCCAG EST sequence (targeted fragment marked with yellow): CTGGAGGGCAAACGCCGCCCGTTACGCCTTGTTCTTGGACGTCGCCGGCAGCAAACTTCGAGGAGTTGGCGGCCGATGCGCCGAACAACTGAACGTCGGCGCTGCGTCGTCGACCCGTGAGGGGAGGGTTGTGCCCCGCGTGCAACGTTCGTTCGTGTCGAGGCTGCGTGCGCTTCTGCTTCCTTTAGTAGTTGTGGGCTTGTCGCGTTCTTGCCGTTCTGTTCTGGGCTTTCAGATGAGCTGATGGATGGTCTGTTTAAATGTCATCAGACTGAATAACTATGTGTAGTACTGTAGTACGTTTTATACTCGAAGTACGCCAGGATAAGGCTGGCAAACGAGCCAGCTCGGCTCGGCTCGTTCTTGATCGTCAGGATAACGAGCCAGCTCGGTTCGGCTCGTTATCTTAACGAGCCAGAAAGCCAGCTCGGCTCGGCTCGTTACGAGCTCGAGCTGGCTCGTTAGGCTCGCGAGCCAGGGAAAAAAAAATACAAAATATAATATTTGTATTTATCTAAAGCATAAAAATATTAATAATATAAAAATAATATATTC |