| mature miRNA: CTCTACCATTGCCTACATTAT species: Guizotia abyssinica database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|211701098|gb|GE552635.1|GE552635 CCHT11288.b1_P13.ab1 CCHT Niger Seed Guizotia abyssinica cDNA clone CCHT11288, mRNA sequence CTCTACCATTGCCTACATTAT EST sequence (targeted fragment marked with yellow): ATTCAACGTTGTTGAAATTTTGGGTTTTTGGTTGGGTCGTCGTCGTCGGATCCTGAAGGAAAACATGGAACAATGGGGATTGTCGACGATGCTTCAATTAACACTGATTGTAGCTCTAGTTTTCGGATTAGGTTTAGCAGTTGCCATTGTTATTGAATCATTTAGAAGAAGATTTAATCACAGCCATCTCGAAGCTCACCCGATCTTTGAAGATCCAAATTCCTTGAAACAGGTTCAATGCCCTTATATATATGATCCTGCAGAAAAATATATTTCATTGATTGTGCCTGCATACAATGAAGAACTTAGACTGCCTGCTGCTCTTGATGAGACAATGAATTTTTGAATTTCCATGTGTAGTTATCTTCAAGAACGGGCTGGAAAGGACCACTTGTTTACATATGAGGTGATAATTGTTGATGATGGAAGTAAGGATGGGACAAAACGAGTAGCGTTTGACTTTGTGAGGAAGTATAAAGTGGACAATGTTAGAGTTGTGCTTCTAGGANAGAATCAGGGGAAAGGAGAAGCTATNAGAAAAGTCAGTCTTATTTATATGGTTTGGTTAAATTGTGTTTCGTATTCATGATTTTTTGTTATACTCGTGAAAACTGATCAAAGCTCGTTGCTTATGCGAAAGCATTGTAAAAACAGGGATGCTTTCATTCTCGGGGAAACTGNCTCTGATGCTAGATGCTGATGGAGCAACAAAGTTGATGACTTGAAAAACTTGAGATCAG | |||||||||