miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse




mature miRNA: CTCTCACCTCTCTCTTCTTCT
species: Medicago truncatula
database: miRNEST
The numbers on the right side of the alignments show a score calculated for them.
When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5.

Predicted miRNA targets
gi|11959811|gb|BE316160.2|BE316160 NF029F10LF1F1079 Developing leaf Medicago truncatula cDNA clone NF029F10LF 5', mRNA sequence

CTCTCACCTCTCTCTTCTTCT
||||| |||||||||. .|||
GAGAGCGGAGAGAGAGAGAGA

EST sequence (targeted fragment marked with yellow):
GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGCGAGAGGAGAACTAGTCTCGAGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT



gi|11906100|gb|BF641942.1|BF641942 NF065D01IN1F1012 Insect herbivory Medicago truncatula cDNA clone NF065D01IN 5', mRNA sequence

CTCTCACCTCTCTCTTCTTCT
||||| |||||||||. .|||
GAGAGAGGAGAGAGAGAGAGA

EST sequence (targeted fragment marked with yellow):
GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGAGAGAGAACTNGTCTCGAGTTTTTTTTTTTCACTCACACTCTCCCTTGGGGTTGTTGAANATGANAATTTG



gi|83665173|gb|DW015581.1|DW015581 EST1224542 MTY Medicago truncatula cDNA clone MTYA716, mRNA sequence

CTCTCACCTCTCTCTTCTTCT
||||| |||||||||. |.||
GAGAGAGGAGAGAGAGAAGGA

EST sequence (targeted fragment marked with yellow):
CGGCCGGGGACACTTTCATTTCTCACACAACACAAAATCTTCATCCTTTTCCTCCTAAAACCCTTCCAATATTCCAACACAAACTATCAACCCAATAACATACATATTCATTTATGGATTCACCAATCACCACCATCCACCCCTACATACTCCAATCCCACATCCTCTCCCGACTTGACGGCACATCACTCACCTCCGTCTCCTCCACCGCCACCCACCTTCACAACCTCTGCACAGAACACCACCTATGGCAAAAAATCATCACCTCCACATGGCCATCTTCTCCGACTCCTTCCCGTCCATCCATTATTCATCTTCATCTTCAGATACTTCTTCTTCATCTTCATTGGCTTTATCTGCTCCGAAGGAATTATTCTCCGCAGTTGATTTATATTACAAGGGCAGACCTGTCTTTTCAAAGCTTCTAAGAACAGAAACACATAAAGGATGGTTTCTTTGTTCACCTCTATGGATGGAAGACATTTGATTGGGAGGGATAGTTTGGGGATTTTGGTTGGGGCTATGGAGAAGGGTGAGAGGTGGAAAGTGGATATTGACAGAGAGAGGAAGAGGTTTGAGGAGTTTTGTGGGAGGAAGAGAGAGAGGAGAGAGAAAAAGTTGAGGAGAGAGAGGGTTATGGATATGATTATTATGGTGGTTGCCATTGTTGTTTTTGCTTTTCTTTTTCGATTTGTGAGGTTTTGGGTTTGATTACACCTTGATTACAACTTACAAGTAAGTTTACTTTGGGATTTTTTTACCTTGTACATGTAGGGGTGGGAATAGATAGCGTAAAATATTACTACTA



gi|11912033|gb|BF646903.1|BF646903 NF071G09EC1F1071 Elicited cell culture Medicago truncatula cDNA clone NF071G09EC 5', mRNA seq

CTCTCACCTCTCTCTTCTTCT
||||| |||||||||. .|||
GAGAGGGGAGAGAGAGAGAGA

EST sequence (targeted fragment marked with yellow):
GAGAGAGAGAGAGAGGGGAGAGACGGTGAGAATATATATATATATATGGAACCAATCTGCTCCTCTCTACAATCTTTCTCTTCCTTCCAGGGCAAGCTTTCTTTTTCTTCAATTTCGTATCGTCCCGACTCGTAAGCGATTAATTCCAAGATTAAGGTGCAATAATGGATAAAGGAAAGGTTGGTATTAATATTGTGTTTATTGGTCATGTCGACTCTGGGAAGTCAACCACTGCTGGTCATTTGATCTACAAGCTTGGAGGTATTAAAAAGGATGTCATTGAGCGATTTGAGAAAGAAGCCGCTGAGATAAACATGTGTTCATTCAAATATGCTTGGGTGCTTGACAAGCTCAAGGCTGAGCGTGAAAGAGGTATCACAATCGACATTTCTCTGTCCAAGTTTGAGACAACCAAGTACTACTGCACTCTCATTGATGCCCCCGGACACAGAGATTTCATTAAGAACATGATCACCGGAACATCCCAAGCTGACTGTGCTGTTCTCGTATATGATTCTACTACTATTGGATCTGACTCTGAAACTGCTATTTCTAGGGTTCGTCAGATCCATGAACATGCTGTCCTTGCTTTAACCCTTGGTGTGAAGCAAATGATCTGCTGCTACAACAAGATGGATGCCACTGCACCCAAATACTCCAAGTATAGGTATGAAA



gi|55448071|gb|AJ848252.1|AJ848252 AJ848252 MtSN4 Medicago truncatula cDNA clone MtN405B21N1, mRNA sequence

CTCTCACCTCTCTCTTCTTCT
||||| ||||| |||.|.|||
GAGAGAGGAGAAAGAGGGAGA

EST sequence (targeted fragment marked with yellow):
AGCACAGTAAAGATTACCCACATCGACAATTAAATCCTGTCAAACCAACCCGCTTATTGCAGTTGCTGCACCGCTTAGGACCATCCTTTGGCTTCTTCTCCAAACTCTCCTCTGAGCCGGAAGCAACTAACGGTTCTGCAGAGATGATTTTGGGCTCCACTGGATCGACTGAGATCTCCACGTTGGCAGTGATAGCAGGTTCAATTCCACTGCTGCTTGATGACCCATTCATGATGTTCCCAATGGAAGATGCTGCAAGTGTGGCCTGCTCCTGTTTCAGCATCATGTCTTTGTGGCACTTGGAACACATGTTCATGGTAGCTGCGCTTCCGAAAAATCCACAGTTGTTGATGCACAACATAGGACCTTCTGGGGCTGCTTCACATCCAGTCTGATCATGGTCCATCTTTTTTCAACTTTCCTTGTAGCCAGGAAACGAAAGCTTCAAGCCGATCTACAAGATCAGAATCGTATAAATAATAATCCTTTGAAGATTTGGGATCGAAGAGGGAGAAAGAGGAGAGAGAAAGAAA



gi|157980098|gb|EX528370.1|EX528370 MTGland_A041_2007-06-23/MTGlandA041_A02_008_1 Medicago truncatula A17 glandular trichome Med

CTCTCACCTCTCTCTTCTTCT
||||| ||||||||.. .|||
GAGAGAGGAGAGAGGGAGAGA

EST sequence (targeted fragment marked with yellow):
GGNNTTACGGCCGGGCTCTTATTTTTTATTTTTATTTTTATGAAAGATAGAGAGAGGGAGAGAGGAGAGAGAGAAGGGAGAGAAGAGAGAGGAAGAGAAGAGAGAGAGTAAAATTTTAAAAGAAAAACAATCCTAACAAATCTCATGTTTTTATGAAATACTTTTTCATGCTAAAATTTCACTAGAAAATCCCACAAAATCCATCAAAATTTAATTTATTAAACAATCCTTCAAAATTTGAATGATTTTGAATACCACAAGACTTTTTTTAAGTGATGAAAAATCTTGATTGAATACCTCAAAGACTTTTTTAAAATGGCAAAGAGTCTTGATTAAATACCACAAGACTTTTTTTAAATTGCAAAGAGTTTTGATTGAATATCACAAGACTTTTTCATAATTAAAAAGTCTTTTAAAATCCATCAGAATCATATTCCAATACATCCCCCTTAATCACAATCTAGTTTTCCTTAAAAAAAAAATCTCAATTTTTTTTTTCAATCACAAAAAGACGATCTGAAACTTTTTTAACAACATTACATTCAATATACCAACGTGTCAAAATTAAATTATATATGGAGAATGATAACTAGTACCCCAATGATGTTTTTATAAAAAAAAAAATTGTGTAATAATTATTTGATCAAAAATAACATTTTATATTTTGGATTAATAGTGTTTTACCCCCTGTAATATATATCATTTTCGGTTTTTCCCTTTGTAAAATATTTTTTTTTGGATATCGTCCTTGTAATTTGAAGATTTTTTTGGTTTTAGACCTTCATGAAAAAAATTTCCCCTTGTAATTTGAGGAAATTTCGGTTTACCCCCTGCAATTTGAGAAANTTTTGGNTTACCCCCTGTTAATTTGAGCAAATTTCGGTTTACTCCCCTGCCATATCATCGATTTTGTACNGTCAAAATTTATGANGNNCCAAAATAAAAAACTTCAAATTACNNGGANGGNATCCAAAANAANNTTTNNNNGANNAAAANTGGNNTGACNTNNNNTNC



gi|151388670|gb|EV258541.1|EV258541 MTYDL51TF JCVI-MT1 Medicago truncatula cDNA 5', mRNA sequence

CTCTCACCTCTCTCTTCTTCT
||||| ||||||||| |||||
GAGAGAGGAGAGAGACGAAGA

EST sequence (targeted fragment marked with yellow):
ACAAAGAGAAGACTCAGCCACCAAACGAAACTAACTCATCGCTGAAACAGAGAAATAGAGAAATGGTGAAAATCACTTCGCCGGAGTCGCCAAACCGCCACCACTCCAACGGCGGCCTCTTCGTAACAATATCAGCGATCCTGGCTCTACTCTCACGAAAAGCTAACCGATTAAAAGAAAAAGCAAAATCATCATCGACGACGAAACCGATCAGAGACGAGGAGTGGAGGTTCGATCTTAAGACACCGCCGAAATCACCGATGGCGAAACCGAAGAAGTTGCTGAGCAATATAAGCAACAAAGCACTGTCGCAATTCGGGAAGAAGAAGCAGAGAGAGGAGAGAGAGAAGGAAGGTTGGGGAAACGGCGGCGTTTGGCAGAAGGAGATTTTGATGGGAGGAAAGTGTGAGCCGTTGGATTTCTCCGGTGTGATTTACTACGATATTAACGGGAAACAGACGCGTGAAGTTCCGATCAGGTCTCCACGCGCTAGTCCTTTGCCTGGATATCTCACGCGCGGTTGAATTCAATCGCTAAATTCTAGGTTTGTTAGGGAGTTGATGAAATTACTAGATTGATATGCACGTGATCTGTGATCGATCGCACGTGTATTTTTAGATTTACTTCGTGTTTTTGCTTATAAGAATTGAAAATTTAGAATTAATAGAGTGTGTTTGTTTGTTAGTTGATGATGAAAACTATACAATTTGTATAAAGTTAATGCGATTTAAGTGAAAGATCTTTGAATTTTCTAATTGGGAAAAAAAAAAAAAAA



gi|20283322|gb|BQ146263.1|BQ146263 NF028B04FL1F1032 Developing flower Medicago truncatula cDNA clone NF028B04FL 5', mRNA sequenc

CTCTCACCTCTCTCTTCTTCT
||||| ||||||||.|| ||
AAGAGTCGAGAGAGAGGACGA

EST sequence (targeted fragment marked with yellow):
CAGGAAAAATGCAGGCTGTTAAAGATAAGCTTCAAGACATGAATGCCATGCCGTAAGGCTAGGGCAGAAGCAAAGGCCCAGGAGAAGGCTGAGAAGGAAATTGCACAAGCAAGAGTGGACATAGCTCATGAAGTTAGGTTGGCAAAAGAGGCAGAAGCACAAATGGACCTACATGTGACAAAAGCAGGAGAGAGAGCTGAGAAAGAAATAGAGAAACATTCATCCACCAATCCAAATGCAGCAAATCCAGATGTAAATGCAAATCCAAATGCAAATGCTACTGCAATGCCATCAAAGGATTCCACATACACTGNTATGTGAATAATCACATGCCTCAAACATGGAGTGAACCATTGGCATATAGTTTTTGCAATAAAAGAAAATAGATATCATGAAGTGTTAAAGGACAAATAGATTAAGATGTATTT



gi|20271505|gb|BQ135381.1|BQ135381 NF004E07EC1F1052 Elicited cell culture Medicago truncatula cDNA clone NF004E07EC 5', mRNA seq

CTCTCACCTCTCTCTTCTTCT
||||| ||||||||..|.||
GAGAGCGGAGAGAGGGGGAGT

EST sequence (targeted fragment marked with yellow):
TTTTTTTTTTTTTTTTTTTCTTTTTTTTTTTCTCTTTCTCTCTTTCTCTTTTTCTTCCTTTCTTTTCCTTTCTTTCCCCTTTTTTTTTCCTTCTTTATTCGAGTCGGTCGTCTGGGTTTGTTGTCCGTCCTGTGGGGGGGGGGCGGGCCCCAGAAGCGAGGGGGGGGCTGCCGTGGGTTGGGGGGTGCGAAATAAAGGGGCGGCGCCGGCCGTTCATGTTGCGAAGTATACCCCCGAAGAAACGAAAGAACCAGCAATCGAAAGGTTCGGAACCGTTAACCGTCCGACCCAATTACCAACACGATAAAATAATGAGATAAATGGACGAATCCGGCGTAGTATCCATCCATACCTTCAGTTTGGCTATCGCAGAGCGGGCCCGTCGCTGCCTAAGATGACAGACCGGCCATATTCCCCCGCCCGGGGGCGAGCGCCAGCCTGAGTGCCGAGGCCTGCGACATAGGCCCCCGGTAGAAGTTCATATCGAGGCCATATCAAGTGGTCGTGCCGCGCATAGCCGCCCTATCCGCCAAGTCAGAGAGCCGCGTCACCCGAGGTGTAGGGTGTGAGTATCTAGATGTATCAAATATCAAGAACACACAAGGGAGCGAAGAAGCGAAGCCGAGATCCGAAGCGCGCGCGGATAAATCGAAGAGAAGACAAGTCACAATAGAGCAAATAAGACTAAATCACGCGCATAACACGAAGAGCGCGCAATCGAGCAACAGAGAAAAGCGCGATGTCGGCGTAGCGGAGAACGCGTGGAGGAGTCGGAAATGGATAGGAGCGCGGAGAGACGGGGGGGGCGTAGTAGAGAATAGGAAAACTGCGACGGTCGACGCGCATGGGTGAGCGCGGATAACGGAAAGCGAGGGTTGGCGAGGCGCGCGCCAGCCGGTCGCGCGACGAGGCGCATCCGGGAAATCGGGTCATAGGACATACCCCCGATATAGTAGGGAAGAGGACACATACGCAGCATATATAAGTGGACACGCGGCGCGACGGCAGAAGCGAAGAGAGGGAAAAGGAGAAGACGCGGCAAGTTATAGTCACGAGGGTGCACCGGGCGCAAACGGTGTGCACGACACACACTAGTCGAGCGTGGTGGTGGGGATGTATGAGGGGGAGAGAGGCGAGAGCGACGGTAACAAGAATACACAGCATAAACGAGGCGCAGCAGCGATGAGGTGAGAGAGGTGAGGCGCCACAGAGCAGCGCCGTAGACGCGGTTGCGCCGTAGTGGTGGCGTGGACACGCGAGGGTGTGGGGCGTAACAAATAAGAGGAGGGGCGGTGCGGAACGCGACACAATATCACAAGTATCGGATGTGTTAGGTTAGAGTGCGATGAATGAG



gi|89246370|gb|DY618157.1|DY618157 AC4431 NOLLY Medicago truncatula cDNA 5', mRNA sequence

CTCTCACCTCTCTCTTCTTCT
||||| |||||||||. |.||
GAGAGAGGAGAGAGAGAAGGA

EST sequence (targeted fragment marked with yellow):
GTGCAGTGTATGCTGAAGGTCACGTGCTGTGGGAAAGTGGGGGGTGAGATGCACTTGAGTGGGGTGAGTTTTAGTATGGAGGATATGGATGGAAGACATTTGATTGGGAGGGATAGTTTGGGGATTTTGGTTGGGGCTATGGAGAAGGGTGAGAGGTGGAAAGTGGATATTGACAGAGAGAAAAGAGGTTTGAGGAGTTTTGTGGGAGGAAGAGAGAGAGGAGAGAGAAAAAGTTGAGGAGAGAGAGGGTTATGGATATGATTATTATGGTGGTTGCAATTGTGTTTTGCTTTTCTTTTTCGATCCCCGAGGTTTTGGGTTCGATTACCCTTACAAGAATTACTTTGGGATTTTTTACCTTGACATTAGGGGGAATA



gi|13596979|gb|BG581915.1|BG581915 EST483651 GVN Medicago truncatula cDNA clone pGVN-66O19 5' end, mRNA sequence

CTCTCACCTCTCTCTTCTTCT
||.||||||||||.|| |||
AAGGGTGGAGAGAGGAGCAGA

EST sequence (targeted fragment marked with yellow):
GCAGAAAAGAAGTCGTACAAAACTTATTTAAGAAGAAGATGTCAGACCTCTTAAAATGTACTCAAAATGCCAACAGAATAGATGGTTCAGACAGCTCTATGCAGATTGATGCATCAAGTGATGTGTCTCAATCAGTTCTCAGGGCGCGGCTTCTTGATTTCGCAGTTTCATTGTTGCCTGGATTAGATACAAAAGATATTGATTTATTATTTCAAGTATTAAAGCCAGCATTGCAGGATGTTGGTGTCATGCAGAAGAAGGCATACAAAGTTCTCTCGATCATACTCAGGAGCTCGGATAGTTTTGTTTCATCGAAGCTTGAGGTTCTGCTTGGGCTTATGGTTGAAATTCTTCCTTGCCATTCTTCTGCCAAACGCCATAGACTTGATTGCCTTTACTTTTTGATACTCCATGTCATGAAGTCCGAGGCAGTCAAAGTTGAGTTCCTTTACTTCTTAACAGTCCAAGACTCGAAATCCAAGGATGATTCGATGGCCTGGCCAGAAGTTTTCCTCACTGAGATAATACTGGCTCTTAAAGAGGCTAATAAGAAAACCAGGAACAGGGCTTATGACATTCTGGTCGAAATCGCCCATGCATTTGGAGACGAGGAGAGAGGTGGGAACAGAAATAACCTCTTTCAATTTTTTATCAAGGTTGCGCGCGGCCTTGTTGGAAAAACTCCACATATGATAAGTGCAACCGTCAAAGGTTTAGCTCGCTTGGCCTATGAATTCTCTGACCTTGCTTTAACTGCTTTCGATTTGCTTCCATCTACTTTTGTCCTGCTCG



gi|9678365|gb|AL378613.1|AL378613 MtBB39D04F1 MtBB Medicago truncatula cDNA clone MtBB39D04 T3, mRNA sequence

CTCTCACCTCTCTCTTCTTCT
||||| |||||||||. .|||
GAGAGAGGAGAGAGAGAGAGA

EST sequence (targeted fragment marked with yellow):
GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGTGTCGAAGAGAGGTCGCGGAGGATCCGCCGGTAACAAATTCAGGATGTCACTGGGTCTACCTGTGGCGGCGACGGTGAACTGCGCCGATAACACCGGAGCTAAGAATCTCTACATCATTTCCGTCAAAGGTATTAAGGGAAGGTTGAACCGTTTGCCTTCAGCTTGCGCTGGTGACATGGTGATGGCCACCGTGAAGAAGGGAAAGCCTGATCTCCGTAAGAAGGTGCTTCCTGCCGTCATCGTTCGTCAGCGTAAACCATGGCGCCGAAAGGACGGTGTTTTCATGTACTTCGAAGATAATGCTGGTGTTATTGTTAATCCCAAAGGAGAA



gi|13606446|gb|BG588306.1|BG588306 EST490115 MHRP- Medicago truncatula cDNA clone pMHRP-47D1, mRNA sequence

CTCTCACCTCTCTCTTCTTCT
||||| ||||||||| |||||
GAGAGAGGAGAGAGACGAAGA

EST sequence (targeted fragment marked with yellow):
CAGAGACGAGGAGTGGAGGTTCGATCTTAAGACACGCCGAAATCACCGATGGCGAAACCGAAGAAGTTGGTGAGCAATATAAGCAGGAAAGCACTGTCGCAATTCGGGAAGAAGAAGCAGAGAGAGGAGAGAGAGAAGGAAGGTTGGGGAAACGGCGGCGTTTGGCAGAAGGAGATTTTGATGGGAGGAAAGTGTGAGCCGTTGGATTTCTCCGGTGTGATTTACTACGATATTAACGGGAAACAGACGCGTGAAGTTCCGATCAGGTCTCCACGCGCTAGTCCTTTGCCTGGATATCTCACGCGCGGTTGAATTCAATCGCTAAATTCTAGGTTTGTTAGGGAGTTGATGAAATTACTAGATTGATATGCACGTGATCTGTGATCGATCGCACGTGTATTTTTAGATTTACTTCGTGTTTTTGCTTATAAGAATTGAAAATTTAGAATTAATAGAGTGTGTTTGTTTGTTAGTTGATGATGAAAACTATACAATTTGTATAAAGTTAATGCGATT



gi|13597691|gb|BG582627.1|BG582627 EST484372 GVN Medicago truncatula cDNA clone pGVN-70O23 5' end, mRNA sequence

CTCTCACCTCTCTCTTCTTCT
||||||| ||||||| |||||
GAGAGTGAAGAGAGA-GAAGA

EST sequence (targeted fragment marked with yellow):
TCTCTCGGTGCGGAAGAGAAGAGAGAGAAGTGAGAGAAGGACAAGGAGGAGAAGAAGAAGGAAGAAGAAGATAGAATAGCGATGGAGCAGGAAGAGCACGAAGTCTACGGTGCTGACATTCCCGATGAAGAGGTTGACATGGATGCCGACATAGATGCTGAACATCAAGAAGGCGATGAAGAACTCGCATCCAATCACACCACCAAGGAATTGGAGGATATGAAGAAGAGGCTGAAAGAGATCGAGGAAGAAGCTAGCGCCCTTCGCGAAATGCAAGCTAAGGTTGAGAAAGAGATGGGCGCTGTTCAAGATCCTGCTGGGTCTTCTGTGTCTCAAGCTGAAAAGGAGGAAGTGGATGCTAGATCTATCTATGTCGGTAATGTTGACTATGCATGCACACCTGAAGAAGTCCAACAGCATTTTCAGTCCTGTGGTACTGTGAACAGAGTCACAATATTGACAGACAAATTTGGTCAACCGAAAGGATTTGCTTATGTAGAATTTGTTGAAGCTGATGCTGTTCAGAATGCTCTCATTTTAAATGAAACTGAATTGCATGGCCGACAGCTGAAGGTGTCTGCAAAACGTACTAATGTTCCTGGATTGAAGCAGTACGGAAGAAGACCTGCTGGTTTCCGCGGTAGGAGGCCTTTCATGCCTGCACCATTCTTTCCACCATATGCTTACGGAAGGGTTCCGAGATATAGAAGACCCACCCGATACCGGCCATACTAGTTCTTATTCTCAACTTAATAGGCGGTTACATCTTTATTATAAAGGACAGATCACTATTAGTTTGTGCCATTATAATAATGTTTATTTGATGGAGC



gi|157977740|gb|EX526012.1|EX526012 MTGland-A070_2007-08-17/MTGland-70_C20_039_1 Medicago truncatula A17 glandular trichome Medi

CTCTCACCTCTCTCTTCTTCT
||||| ||||||||.||||
TAGAGTAGAGAGAGAGGAAGT

EST sequence (targeted fragment marked with yellow):
TNACGGCCGGGANNGACGTTTTAGGCATTTCACACGTATTAAGAAATATAATTAATTTTGTGTGGGAAATAGATATTATGAGTTATTTTACAAAATTGTCCTTAATAAGTTGTATGGGAAAGATAAATTAAATAATTGAAAGAATAGAGAGTAATAAATAGTTAAGGATATAATGAGAAAAGTAACTTTAATGTTTCATTGGTATTGTAAAGCGACATATAATTTGGGACAAATATTTTTTCCAAAGCGACATACAATTTGGGACGGAGGGAGTATTTAACAAAAATATTTAGTCTCATCGATATTGTGAGTTCAGACGCGCCTCTGACTTGACTATATATGATAAAATAAAGGCTAATAATCCATCAACACCCTTTCATCTGTCCACCCTTCTACCACTGCCTATGTGGCAATTATTTTTTGTCTCATTTAACCAAAATAATAATAAAATAAGAAAATAGTACAGTCTCTTTCTTTCTATCAAACCTCACAACACCAGCCCATCTTTCTTCTCTGTTTCGCACGCTCCCACCACCACCGCTCCTTCCTCACTGTCTCCTCCACCGGCCGGCGGCCTCGACCACCCTCTCCTCCCCATCCATTATCTTCTTTATGCTACTATTACACCGTCCTGTTTTAGTGAGAGAGAGAGAGAGAGAGAGATTATATGTGAAGGAGAGAGAGATGAGATGCNAGATTCGACATCAAAGCCGGCAGAAACGAGGCGTAGAAGCGGCGGANGTGGGCTGCGTATTCATTACCNTCGACNGTGAGTGTTCTATGTTTCGGTGGNGAGATACGANNNTTATATGACAGAGAAAGGNNNNNNGGGGTGG



gi|20287668|gb|BQ150609.1|BQ150609 NF038A10LF1F1070 Developing leaf Medicago truncatula cDNA clone NF038A10LF 5', mRNA sequence

CTCTCACCTCTCTCTTCTTCT
||||| |||||||||. .|||
GAGAGAGGAGAGAGAGAGAGA

EST sequence (targeted fragment marked with yellow):
TGATTACGCCAGCTCGAAATTAACCCTCACTAAAGGGAACAAAAGCTGGAGCTCCACCGCGGTGGCGGCCGCTCTAGAACTAGTGGATCCCCCGGGCTGCAGGAATTCGGCACGAGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGAGAGAGAGAGCTCTAGTCTCGAGGGGGGGCCCGGTACCCAATTCGCCCTATAGTGAGTCGTATTACAATTCACTGGCCGTCGTTTTACAACGTCGTGACTGGGAAAACCCTGGCGTTACCCAACTTAATCGCCTTGCAGCACATCCCCCTTTCGCCAGCTGGCGTAATAGCGAAGAGGCCCGCACCGATCGCCCTTCCCAACAGTTGCGCACCCTGAATGGCGAATGGCAAATTGTTAGCCGTTATATTTTGTTAAAAATTCGCGTTAAATTTTTTGGTAAATATCAGCTCATTTTTTTTAACCAATATGGCCGAATAATTCGGCGAAAATTCCCTTATATATCAAAAATATTATTACCCCGATATATAGGGTTTGAGGTGTCTTCTTCCCACTGTTTTGGGAACCATATGGATTCCCTCTTTTATAAGGACCGGTGGGTCTCCCTCACCGTTCCAAGGGGCCGGAAAAACCCCGCTTCTTTGCAGGGGCCGATGGGCCCCCTTATCGTTGGAACCCTTTCCCCTTTTTTAATTTTTTTTGGGGCGTGTCGCGATGTCGCGCCCACCACACCCTCTATTTCGCCGAACCCTTCCAGGGGGCCCCCCATTTTTATCTCTCTTTTTGGGGTATCCCCGCCACAACTCCTCTGCTCATATTATAGGGAAGGGAATAAACT



gi|11913048|gb|BF647918.1|BF647918 NF038D09EC1F1077 Elicited cell culture Medicago truncatula cDNA clone NF038D09EC 5', mRNA seq

CTCTCACCTCTCTCTTCTTCT
||||| |||||||||. .|||
GAGAGAGGAGAGAGAGAGAGA

EST sequence (targeted fragment marked with yellow):
AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGAGAGAGAGAGAACTAGTCTCGAGTTTTTTTTTTTTTTTTTTGGGAAAAACATACATAACAAAACTATGAGAATTATTAGATCAAAACATCAACCAAACCAATATCAATATATCCAATTCAAGTAATGATTCCATTCTCTAAATCTTGATCATGATTCAAACTTGAACTTCAAGTTAGGATGAANAAGTGAGATATGAAAAGAAATGGTAAAATAGCACAAACCACCTNTGCCACCAGCCACCTNCTTCCCAATCCACCACCACTCTTTTCCTCAGAACTTGAGCTTGATCCCTTCTCANCAAAACCGCTGGAAATAGGGGTGGAACTGTTTGTTTTGGTAAAATTTCCAAGTCCTTCAAACACCTTATCTTCAGGGGATTTAGGTGA



gi|151388384|gb|EV258255.1|EV258255 MTYDI22TF JCVI-MT1 Medicago truncatula cDNA 5', mRNA sequence

CTCTCACCTCTCTCTTCTTCT
|||.||||||||||| | ||.
GAGGGTGGAGAGAGATGCAGG

EST sequence (targeted fragment marked with yellow):
AGTTCTCACCACCACCAAAACACTTCACAAAACTGAAAGAGAAAATCGTAACGTATCTAGCAATGGACTTCGACGAGTACGAGTACTTGGAGAAGACGGTGGAGGAGCAACCGGAAGACAAGGATTCATCCAAAAAGAAGAACACTGATATCACCGACATTAAATCCGAGAGGACTTACCGGAAGCACGGCATCGACGACGATCTCGACGGCGGCGAAGATAGGCGGAGCAAGAGGTCACGCGGCGGAGATGACGAGAATGGCTCTAAGAAGGATCGCGATAGAGACAGAGACCGTGAACGTGACCGAGAACACCGCGAACGATCTTCCGGTCGTCACCGGGAGAGGGACGGAGAGAGAGGTAGTAGAGAGAAAGAGAGGGAGAAGGACGTAGAGAGAGGTGGGAGAGATAAGGAGAGGGATAGGGAGAGAGAAAAGGAGAGGGAGAGGAGAGATAAGGAAAGGGAAAAGGAACGGGAGAGAAGAGATAAGGAGAGAGAGAAGGAGCGTGCTGAGAGAGAAAAAGAGGAGAAAGAGAGACCAAGGAGGAGTATGAGTCGTCCTGAGAGAGACAGAGGAGAGCGAGATTTCGAAAACAGAGATGGCAGGAGATTCAGGGATAAGAAAGAGAATGTGGAACCTGAGGCAGACCCAGAAAGGGATCAGAGAACTGTTTTTGCCTACCAGATGCCCTTAAAAGCAACGGAGAGAGATGTATACGAGTTCTTCTCAAAAGCTGGCAAGGTGAGAGATGTTCGTCTGATCATGGATAGGAACTCAAGACGATCTAAAAGGAGTTGGGTATATTGA



gi|260524624|gb|GT142693.1|GT142693 METC689TR JCVI-MT3 Medicago truncatula cDNA 3', mRNA sequence

CTCTCACCTCTCTCTTCTTCT
||||| |||||||||. |.||
GAGAGAGGAGAGAGAGAAGGA

EST sequence (targeted fragment marked with yellow):
AATGGGAATGGTGCAGTGTATGGTGAAGGTCACGTGCTGTGGGAAAGTTGGGGGTGAGATGCACGTGACTGGGGTGAGTTTTAGTATGGAGGATATGGATGGAAGACATTTGATTGGGAGGGATAGTTTGGGGATTTTGGTTGGGGCTATGGAGAAGGGTGAGAGGTGGAAAGTGGATATTGACAGAGAGAAGAAGAGGTTTGAGGAGTTTTGTGGGAGGAAGAGAGAGAGGAGAGAGAAAAAGTTGAGGAGAGAGAGGGTTATGGATATGATTATTATGGTGATTGCCATTGTTGTTTTTGCTTTTCTTTTTCGATTTGTGAGGTTTTGGGTTTGATTACACCTTGATTACAACTTACAAGTAAGTTTACTTTGGGATTTTTTTACCTTGTACATGTAGGGGTGGGAATAGATAGCGTAAAATATTACTACTAATTAAGGTTGATAGAGAAAAAAGAGGAAGTGAAAAGTTGTAATACAAAGGCAACCAACATATACATTATACAACTATTATTATACAATAGTACACTATAAATGTATGTATTGGAAATTCAAAAGAGAAATGATATTTGAACATCTATTTTATGATAAAAAAAAAAAAAAAAAAAAA



gi|20287686|gb|BQ150627.1|BQ150627 NF039A10LF1F1070 Developing leaf Medicago truncatula cDNA clone NF039A10LF 5', mRNA sequence

CTCTCACCTCTCTCTTCTTCT
||||| |||||||||. .|||
GAGAGAGGAGAGAGAGAGAGA

EST sequence (targeted fragment marked with yellow):
CTTATTACGCCAGCTCGAAATTAACCCTCACTAAAGGGAACAAAAGCTGGAGCTCCACCGCGGTGGCGGCCGCTCTAGAACTAGTGGATCCCCCGGGCTGCAGGAATTCGGCACGAGGCCTCGTGCCGAATTCGGCACGAGGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGAGAGAGAGAGATCTAGTCTCGAGGGGGGGCCCGGTACCCAATTCGCCCTATAGTGAGTCGTATTACAATTCACTGGCCGTCGTTTTACAACGTCGTGACTGGGAAAACCCTGGCGTTACCCATCTTATTCGCCTTGCAGCACATCCCCCTTTCTCCAGCTGGCGTAATAGCGAAGAGGCCCGCACCGATCGCCCTTCCCAACATTTTGCGCACCCTGTATGGCGAATGGCAAATTGTAACGCGTTTCATATTTTGGTTAAAATTCCGCCGTTTAAATTTTTTGGTTAATTCCGCCTTCATTTTTTTATCCGATAGGCCGATATTCGGCTAATATTCCCTTTTTCACTCCACAAAGATACTTAACCCCAGTATAGTGGGTTTGGCGGTGTTGTTTCCCTCTTTATGTACCAGATAGTTCCTCTATTTGTAGTGTGACGTTGCGTCTTCCCTCCCTTTTTTGTGCGCCTCTTTCCGCCTTTTTTTATATGTTGTAGCGCCCCCGTTACGTGCGTCTGACTAGTTCTCCCGTGTCTCGCGCCCGTTTTATATTTTATATATGTTCTTTTGTTTTCCCATATTCCCTTTCTCGTTTTCCTTTTCCCCTTTTCTTTTCCGTTCCTTTTTGTGTCGTTTTGCGCCCGC



gi|20287128|gb|BQ150069.1|BQ150069 NF006D08LF1F1073 Developing leaf Medicago truncatula cDNA clone NF006D08LF 5', mRNA sequence

CTCTCACCTCTCTCTTCTTCT
|||||||||||||..|..||
AAGAGTGGAGAGAGGGGGGGA

EST sequence (targeted fragment marked with yellow):
CTTGATACGCCAAGCTCGAAATTAACCCTCACTAAAGGGAACAAAAGCTGGAGCTCCACCGCGGTGGCGGCCGCTCTAGAACTAGTGGATCCCCCGGGCTGCAGGAATTCGGCACGAGGCCTCGTGCCGAATTCGGCACGAGGAGAGAACTAGTCTCGAGGGGGGGCCCCGGTACCCAATTTCGCCCTATAGTGAGTTCGTATTACAATTTAACTGGCCCGGTCGTTTTTTAACAACCGTTCTTGAACTTGGGGAAAAACCCTTTGGCGGTTACCCACAACTTTATTTTGCCTTTTGGAAAAAATTTCCCCCTTTTTGCCCAACTTGGGGGTTAATAACCAAAAAAAGGGCCCCCCCCCCGATTTTCCCCTTTTCTCCAAAAAAATTGTGTGCCCACCCCCCCTTATATTTTGGGGAAAAAAAGGGGCCAAAAATTTTTTAAACCCCTTTATTTTTTTTTTTTTTTTTTAAAAAAAAAAAACCCCCCGGGGGAAAAAATTTTTTTGTGTGTTGGAAAAAACCCACCAACTTTTTTTTTTTTATAAAAAAGAGGGGGGGAGAGAGGTGAGAAAGAAAACTTCTTCTTTTAAAAAAAAAAAA