miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse




mature miRNA: CTGACGGTGGACACGATGGTG
species: Oryza sativa
database: miRNEST
The numbers on the right side of the alignments show a score calculated for them.
When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5.

Predicted miRNA targets
gi|88675787|gb|CI729359.1|CI729359 CI729359 Oryza sativa (japonica cultivar-group) 9 leaf-stage leaf Oryza sativa Japonica Group

CTGACGGTGGACACGATGGTG
|.|||||.||| ||||.||.|
GGCTGCCGCCTCTGCTGCCGC

EST sequence (targeted fragment marked with yellow):
GATGTCGCCGGACGGTCGCCGNACACGCCACAGTCGTCGTTGCACACACGCGCCGCCGTTGTTGTCGTCCTCTTCTCCTCCGACGTCGTCGTCGCCGTCGCCGTCGTGAACATGGCGGCGGAGGCGGAGCAGCAGCACCAGCTGCTGTCGACGGCCGTGCACGACACGATGCCGGGGAAGTACGTCCGCCCGGAGTCGCAGCGCCCGCGCCTCGACCTCGTCGTCTCCGACGCCCGCATCCCCGTCGTCGACCTCGCCTCCCCCGACCGCGCCGCCGTCGTCTCCGCCGTCGGCGACGCCTGCCCGCACCACGGCTTCTTCCAGGTGGTGAACCATGGCATCGATGCG



gi|88734939|gb|CI758447.1|CI758447 CI758447 Oryza sativa (japonica cultivar-group) library (Kikuchi S) Oryza sativa Japonica Gro

CTGACGGTGGACACGATGGTG
||||||.|||| |||.||.|
AACTGCCGCCTGAGCTGCCGC

EST sequence (targeted fragment marked with yellow):
TTGAAGGGAAAGTAAGAAAGAAAGAAAAGAAAAAAAAAAGGAAAATCGTGTCTCGTCTCGTCTCGTCTTCGTCTCCCCCGATTCCCGAGCAGCTTCTCGAAACCCTCGCGGCCTCGATTCCGGCGATGGCGGAGCCCAACCCGCAAGTGGAGAGGGAGGTGGAGGTGGAGGAGGTGAGGAGGCCGAAGCTGAGGTACTTGGAGTTCGTGCAGGTGGCGGCAGCGCAGGCGAAGATCTGCCTCGCGGGGCTCTACGCGCCTGCCAAGGACCACGCCGGCCCGCTCCGCCCCGGCGTCGACGCCGTCGAGTCCGCCGTCAAGGGCGTCGTCGGC



gi|88837848|gb|CI371426.1|CI371426 CI371426 Oryza sativa (japonica cultivar-group) callus Oryza sativa Japonica Group cDNA clone

CTGACGGTGGACACGATGGTG
||||||||| ||||.||||
CCCTGCCACCTCTGCTGCCAC

EST sequence (targeted fragment marked with yellow):
GTCGCTGCCAAACCACCGAGCAAACATTATTATCATTATTCTCATTTATAATCAAACAGGTCGAGTTTGAAGCCTGTGTTGTTCTTGTCATCGATCTACAATGCAGCCCTCTGCTGGCTGAAAGCCACCGGAATTTATGTGACCAGGTTGATGCCCTCGGCGAGGAGGGAGTCGGCGAGCACCTGGTTCGCCGCCTCCGACGGGTGGACGGGGTCCCAGAACACGTACGTCGTCGCGTTCGGGCAGGTGCCGATCGACTTGGGGTTGCACAGAAGCACCGTCGTCTCCACCGTCCCTGTCCGCAGAATCCCCTCCTCGCCTCCGTGAATCCTTGGGATTGAGGAGAGGTGACGAGGTCGTAGAGGGGCGTGTAGATGTCGAACACGGCGATCTTGAGGTCGGAGTAGGTCTTCGAAAGCGAGTCGACGGTGACGTTCATCTTGCCGTTGAAGTTCTGGCGTCGCTGTT



gi|117229895|gb|CT846333.1|CT846333 CT846333 Oryza sativa (indica cultivar-group) cv. Guang Lu Ai 4 Oryza sativa Indica Group cD

CTGACGGTGGACACGATGGTG
|||||||..|| |||||.||
GACTGCCGTCTAAGCTACTAC

EST sequence (targeted fragment marked with yellow):
AATAAATTTAATTACACGAATCTTATGTCACAAGCATTCCTCGACGCAGCTGAGGAGGTCAAGAAGCTCAAAACCAAGCCATCCAATGATCACCTTCTCCTTCTCTATGGTCTCTACAAGCAAGTCACAGTTGGAGATAACAACACTGCCGAACCCGGAATGTTCTCCTTTGAGGGTAAAGCTAAATGGAAAGCATGGAATGAGCACAAGGGAAAACCAAAGGATCAAGCAGAAAAAGAGGATATTGCCGAAGTTGAAGCCCTCAAAAAGACCAATAGCTGATCTATATGAATAAAGATCCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCTACAAACAAAAAAAGACGACGTGAGCATTGCAGAGTTCAGTGTAACAAAGACACTGAAGCTACAGCCTACAGAGAGAGAGTATCTGGATACTTAATTGTGTGCTTAGCTTGCGGTTAAGCAATGGCTTATTCCAGGCAAATCTTCGTCTGCTCTGCCATGGCTGCGTTGCTCTTCTCTGCTGTTGTTTCGGCGCAGCTCTCCACTGATTTCTACGACGAGACATGCCCCGACGCGCTCGACATCATCGAATCTGCCGTCAGAGCCGCCGTTTCCAAGGAGTCCCGCATGGGAGCTTCTTTGCTGCGCCTCCATTTCCACGACTGCTTTGTCAATGGGTGTGACGGGTCAGTGCTGCTCGACGACACGGCGGCCATCACCGGCGAGAAGAACGCGAAGCCGAACAAGAACTCCCTCCGCGGCTTCGAGGTCGTCGACGACATCAAGTCGCAGCTCGAGGATGCCTGCGAGCAGGTCGTCTCCTGCGCCGACATCCTCGCCGTCGCCGCCCGCGACTCCGTCGTCGCTCTGGGCGGGCCGACGTGGGACGTCGAGCTGGGCCGGCGAGACGGGACGACGGCGAGCCTGGACGCGGCGAACAACGACCTCCCGCCGCCGACGTCCGACCTCGCCGACCTGATCAAGTCCTTCTCCGACAAGGGCCTGACGGCGAGCGACATGATCGCGCTGTCGGGCGCGCACACCATCGGGCAAGCCAGGTGCACCAACTTTCGCGGCCGCCTCTACAACGAGACCAACCTCGACGCCACCCTCGCCACCTCGCTGAAGCCGAGTTGCCCCAACCCCACCGGCGGCGACGACAACACGGCGCCGCTCGACCCGGCCACCTCCTACGTGTTCGACAACTTCTACTACAGGAACCTCCT



gi|86506734|gb|CI149367.1|CI149367 CI149367 Oryza sativa (japonica cultivar-group) Panicles mixture of one, two, three weeks aft

CTGACGGTGGACACGATGGTG
||||||||| ||||.||||
CCCTGCCACCTCTGCTGCCAC

EST sequence (targeted fragment marked with yellow):
TAAAAAGAAGTGTTGAAATCATCTGAGTATATTAATACGACGAGACAATAAAACTTTCAAACAAAAAAAAATGATAAGTACAGAAACCTTCAAGACCTACTCCCAGTTTATCGAGCTGTGTATAAAATTTAAAACTGTAAAACATCGTCCTATATTGCTGGGCTGATGGCATGCAACACAGCGACAGCCCGAAACACCCTCAACTCCACATCGACACATTTTAGAGCTGTCGCTGCCAAACCACCGAGCAAACATTATTATCATTATTCTCATTTATAATCAAACAGGTCGAGTTTGAAGCCTGTGTTGTTCTTGTCATCGATCTACAATGCAGCCCTCTGCTGGCTGAAAGCCACCGGAATTTATGTGACCAGGTTGATGCCCTCGGCGAGGAGGGAGTCGGCGAGCACCTGGTTCGCCTCCGACGGGTGGACGGCGTCCCAGAACACGTACGTCGTCGCGTTCGGGCAGGTGCCGATCGACTTGGGGTTGCACAGAAGCACCGTCGTCTCCACCGTCCCTGTCCCGCAGCATC



gi|88741206|gb|CI764714.1|CI764714 CI764714 Oryza sativa (japonica cultivar-group) 2 weeks seedlings root of seedling UVC irradi

CTGACGGTGGACACGATGGTG
||||||||||||| ||||.||
GACTGCCACCTGTCCTACTAC

EST sequence (targeted fragment marked with yellow):
GTCAACTCCGTCGACGGTTTCCAAGGCAGCGAGGAGGACATCATCATCCTGTCCACCGTCAGGTCCAACAGTACAGGATCCATCGGTTTCCTCTCCAACCGTCGCCGCGCCAACGTCGCCCTGACAAGGGCAAGGCATTGCCTCTGGATCCTGGGCGACGCGGCGACGTTGCTCGGCAGCGGCTCCGTCTGGGGGGAGCTGGTCCGGGACGCCGTGGATCGCCGGTGCTTCTACGACTGGGACGACGGCGGCGCTGGTTTGCTCGGCGTTGCTCGGCGCGGACACGAGGACGAGCTGGACGATGCGGTCGAGTTCGCTACGGCGTTTGACACGTTCGCAGACGAAGCGGGGTGCAGAGACGATATCTGCGACGCGCTAGGCT



gi|88973951|gb|CI718359.1|CI718359 CI718359 Oryza sativa (japonica cultivar-group) 9 leaf-stage leaf Oryza sativa Japonica Group

CTGACGGTGGACACGATGGTG
|.|||||.||| ||||.||.|
GGCTGCCGCCTCTGCTGCCGC

EST sequence (targeted fragment marked with yellow):
GATGTCGCCGGACGGTCGCCGCACACGCCACAGTCGTCGTTGCACACACGCGCCGCCGTTGTTGTCGTCCTCTTCTCCTCCGACGTCGTCGTCGCCGTCGCCGTCGTGAACATGGCGGCGGAGGCGGAGCAGCAGCACCAGCTGCTGTCGACGGCCGTGCACGACACGATGCCGGGGAAGTACGTCCGCCCGGAGTCGCAGCGCCCGCGCCTCGACCTCGTCGTCTCCGACGCCCGCATCCCCGTCGTCGACCTCGCCTCCCCCGACCGCGCCGCCGTCGTCTCCGCCGTCGGCGACGCCTGCCGCACCCACGGCTTCTTCCAGGTGGTGAACCATGGCATCG



gi|66929151|gb|CX115999.1|CX115999 EI101O01 A normalized whole-life-cycle cDNA library of rice Oryza sativa Indica Group cDNA cl

CTGACGGTGGACACGATGGTG
||||||||.|||||| |||.
GACTGCCATCTGTGCGACCGG

EST sequence (targeted fragment marked with yellow):
GGCGCCAGTTGGATCTCTAGGACTGTGCGGCATCCGGTNTGACCACGCGTCTNCAGATGACATGACGTTGTTGATGAGCGAAGACGTGTCGGCGCGTGGAGGGCATACCCGTCGCTGTGCTGACGACTGCGATCGGCAACTTCGCCGGTCCGTGTCATCGAGCCCAGGTGCTGGAGCGCATAGTGCGAGAGACATCGATGGGTCCCACACGGAGGCTTCGTGGTTCCCTCTCCAGTCATCGACCAGTTCTGTCGAGCTTCGCTCGTGAGCTACGTGAACGTCGAGATGGGCATCACCATGGCGATCGTGTTCACCGGCCAGCGTGTCTACCGTCAGATTAGCGTCACCGACCGTCCTGCATCGTTGACGAGATGATACACTGTGGTTGCTGGGCCAACTTCGTAGTCCAGAGGCGACGTTCCTAGGTATGATACCGCACGGAGCGAGAATAAAGACGGACACCCATAAAGTGGTTTTATGCTGCGAGGCACATAAGCACCCCATCGAGAGGCCATTGATCAATAACCCGAAAAAATATCTACATCAGCTATGCATACTCTATGATAGATCGCAATCACACTTCAGCTATGACTACAAGACCTGGCGCTGCGCGGTTGCTGGGCACGATACTTATACACTTCGTTCAAAGTAGACTAAATGTCAATCGCATAAGAATAAAACTAATTCCCCTTACTTCTCACCTATCCATCATAACACTCCATATTACATCCCCAAAAACAATACACACAACACTAATACTTCTATTCTTATCAAAATCTAACACAAAATCAAAAATGACCACACAAATCCTGTCCACATGCACCACACTACACCATCAGACTATACAAACCCTCCCACCTCTTTCCTAACATACTACTACCATCTACCACCCACTCTCATATCTCCATTAAAAGAAATACAAATAATATGACAAACTAACACCGCACCTCCAATGACAATATACACACCACATCCCACACATCTACAGAAGCTAGAAGTTATACTAGAATAAACTCATTACATCACGAAACGCAAAAACCTCAAATATCATACCTATGTACATCTACTATCACACAATAACCCTCCGAAGCAA



gi|89169461|gb|CI109820.1|CI109820 CI109820 Oryza sativa (japonica cultivar-group) Panicles less than 5cm stage Oryza sativa Jap

CTGACGGTGGACACGATGGTG
| ||||||||| ||||||||
GCCTGCCACCTCGGCTACCAC

EST sequence (targeted fragment marked with yellow):
CCACAGTGTGACAAAATCTTGCACACCACACTTGATCATCACTTTTTTTTTCAACGAAAACTTGTTCGTCGCACTTCTCCTGTTAACCACCATATAAATCTCCCCAAAAGTGAAGTCTTTCACCACTTATGCATGCCAAGAGGTTTAACAAGATGGCTCGGCCGTCGTCGTCGTGGTGGATGGCGCTGCTCGTCGTCGCCGCCGTGGCGCAGCTCGGCGCGTCCGACCTGAGGACGGACTACTACAACAGCACGTGCCCCAACGTCGAGAGCATCGTGCTCGGCGTGGTGAAGGACAAGATGCAGGCCACCATCCGCACCATCGGCTCCACCGTCCGCCTCTTCTTCCACGACTGCTTCGTCGATGTACAAACACTTTGCTTGATTGATTAATCGGCGATGTGTCAAGCATGGCGATCTCGATTGACTGACGTCGTGTGTGCGGCGTGGCGTGGCGTGGCGTGCAGGGGTGTGACGGCTCGGTGCTGATCACGTCGACGGCGGGCAACACGGCGGAG



gi|88412117|gb|CI566846.1|CI566846 CI566846 Oryza sativa (japonica cultivar-group) shoot Oryza sativa Japonica Group cDNA clone

CTGACGGTGGACACGATGGTG
|.||||.|||| ||||.||.|
GGCTGCTACCTCTGCTGCCGC

EST sequence (targeted fragment marked with yellow):
GACGTATCGCTCTCCCTCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTCGCCGCGCGGCGGAGGCGTTCGTCGCGAGCTGTCGGCTTCCCTCCTCGCGCCCGCGGCGGCTGTGGCCATGGAGGTCCCCATCTCCGGCGGCGGCGGAGGGGAGAGGTTCTGCCACGCGGAGCAGGTGGTGGGGGCGGACGGGGAGATGGACGGGGAGGCGATGGCGCGGTTCGCGGCGGGGGCGGGGCTCCTGGGCCGTGGCCTCTCCTACGCCGTCGTCTCCATCGTCGGGCCCCAGGGCAGCGGGAAAAGCACC



gi|87022996|gb|CI280013.1|CI280013 CI280013 Oryza sativa (japonica cultivar-group) supermix Oryza sativa Japonica Group cDNA clo

CTGACGGTGGACACGATGGTG
|||||||||| |||||||||
CACTGCCACCTCTGCTACCAC

EST sequence (targeted fragment marked with yellow):
GAAAAAGTCAAATAGCCTGCAAATTTCAACCATTACAAGGGTGCCAACAGATCCGCAGATCCGCATCGGTCGCTGAACATCGAACCCTGCCATGCCACCAAACAACATATAGCTTTTGTTCTCGATCAACAAACCAAGCATGACATGCCAATATTTACAAACATCAAACTAGCAAGCTCTGCATTAGTTGAGCTTTATTACCAGTACTAAGTATATTACTTAGCAACTATTATTTTGGCCTCTTGACAATCAGCACTGGGCATTTGCAGTTCTGCGCACAGTGATTGCTCACGCTTCCCAGGAACGCCCTCTGGATGAGGCCGTATCCATGGGTGCCCATGACCAGCAGATCGGCGGCCATCTTCTCGGTGGCGTCGCAGATGACGTCGCGCGGGTCCCCGCTCCCCACCATCGTCTCCACCGTCACGTGAGGGAAAGCGGCGCAGATGTGCTTGGCCTTGCCCACCGCCGCGGCGGAGACGGCGGCGGCGTACTTGTCCATGCTCGCCATCACGTCCGAGGTCATCATGTACCCTGAGCTGTCCATGGC



gi|88215643|gb|CI215492.1|CI215492 CI215492 Oryza sativa (japonica cultivar-group) Panicles mixture of one, two, three weeks aft

CTGACGGTGGACACGATGGTG
||||||||| |||||||||
CTGCCACCTCTGCTACCAC

EST sequence (targeted fragment marked with yellow):
GTGAATTAAAATTACTCAGATGCATAGAAAAAGTCAAATAGCCTGCAAATTTCAACCATTACAAGGTGCCAACAGATCCGCAGATCCGCATCGGTCGCTGAACATCGAACGCTGCCATGCCACCAAACAACATATAGCTTTTGTTCTCGATCAACAAACCAAGCATGACATGCCAATATTTACAAACATCAAACCAGCAAGCTCTGCATTAGTTGAGCTTTATTACCAGTACTAAGTATATTACTTAGCAACTATTATTTTGGCCTCTTGACAATCAGCACTGGGCATTTGCAGTTCTGCGCACAGTGATTGCTCACGCTTCCCAGGAACGCCCTCTGGATGAGGCCGTATCCATGGGTGCCCATGACCAGCAGATCGGCGGCCATCTTCTCGGTGGCGTCGCAGATGACGTCGCGCGGGTCCCCGCTCTCCACCATCGTCTCCACCGTC



gi|86529048|gb|CI169254.1|CI169254 CI169254 Oryza sativa (japonica cultivar-group) supermix Oryza sativa Japonica Group cDNA clo

CTGACGGTGGACACGATGGTG
|||||||||| |||||||||
CACTGCCACCTCTGCTACCAC

EST sequence (targeted fragment marked with yellow):
GTGAATTAAAATTACTCAGATGCATAGAAAAAGTCAAATAGCCTGCAAATTTCAACCATTACAAGGTGCCAACAGATCCGCAGATCCGCATCGGTCGCTGAACATCGAACGCTGCCATGCCACCAAACAACATATAGCTTTTGTTCTCGATCAACAAACCAAGCATGACATGCCAATATTTACAAACATCAAACTAGCAAGCTCTGCATTAGTTGAGCTTTATTACCAGTACTAAGTATATTACTTAGCAACTATTATTTTGGCCTCTTGACAATCAGCACTGGGCATTTGCAGTTCTGCGCACAGTGATTGCTCACGCTTCCCAGGAACGCCCTCTGGATGAGGCCGTATCCATGGGTGCCCATGACCAGCAGATCGGCGGCCATCTTCTCGGTGGCGTCGCAGATTACGTCGCGCGGGTCCCCGCTCTCCACCATCGTCTCCACCGTCACGTGAGGGAAAGCGGCGCAGATGTGCTTGGCCTTGCCCACCGCCGCGGC



gi|33814623|gb|CF333176.1|CF333176 JMT--01-P13.g1 AtJMT-overexpressing transgenic rice plasmid cDNA library (JMT) Oryza sativa J

CTGACGGTGGACACGATGGTG
|||||||||| |||||||||
CACTGCCACCTCTGCTACCAC

EST sequence (targeted fragment marked with yellow):
TTTTTTTTTTTTTTGTGAATTAAAATTACTCAGATGCATAGAAAAAGTCAAATAGCCTGCAAATTTCAACCATTACAAGGTGCCAACAGATCCGCAGATCCGCATCGGTCGCTGAACATCGAACGCTGCCATGCCACCAAACAACATATAGCTTTTGTTCTCGATCAACAAACCAAGCATGACATGCCAATATTTACAAACATCAAACTAGCAAGCTCTGCATTAGTTGAGCTTTATTACCAGTACTAAGTATATTACTTAGCAACTATTATTTTGGCCTCTTGACAATCAGCACTGGGCATTTGCAGTTCTGCGCACAGTGATTGCTCACGCTTCCCAGGAACGCCCTCTGGACGAGGCCGTATCCATGGGTGCCCATGACCAGCAGATCGGCGGCCATCTTCTCGGTGGCGTCGCAGATGACGTCGCGCGGGTCCCCGCTCTCCACCATCGTCTCCACCGTCACGTGAGGGAAAGCGGC



gi|88308034|gb|CI647861.1|CI647861 CI647861 Oryza sativa (japonica cultivar-group) library (Kikuchi S) Oryza sativa Japonica Gro

CTGACGGTGGACACGATGGTG
|.||||||||| | | |||||
GGCTGCCACCTCTCCCACCAC

EST sequence (targeted fragment marked with yellow):
TGTGTGGGCTGGCCCCCGGCCGGCGGGTGGCCGGGTGGGGAGGAGGTCGGCAGGGCGAGGCGAGAGAGGCGCCCGGCGACGGGCGATGTGGAAAGAGGTGCTCGCGTCGATGCGGTCGTCGTCGCCGCCGGCCAGGTGGGGGGAGGTGGAGGCAGGGAAGGGGAAGAGTGGAGGGAGTGGGAAGGGCGGCGACCGGCGGCGAGAGTGCATGGAGAGGGAGGAGACAAGGAAGCCAGCGGCGAGCGCGCAGGTAGATCCTCTTCATCGCCACTTTGGGCCGCCTCGTCGCCCGCAGGAGGTGGCCAAGTCGATGTCGGCAGTTCTACGTCGCCTCCATGTACTGGTTCATCACCACCCTCTCCACCGTCGGCTACGGCGACATGCACGCCGAGAACACCGGAGAGATGGTCTACACCACCGCCTAC



gi|88692453|gb|CI736028.1|CI736028 CI736028 Oryza sativa (japonica cultivar-group) after pollination embryo Oryza sativa Japonic

CTGACGGTGGACACGATGGTG
||||||.|||| |||.||.|
AACTGCCGCCTGAGCTGCCGC

EST sequence (targeted fragment marked with yellow):
GCTTGAAGGGAAAGTAAGAAAGAAAGAAAAGAAAAAAAAAAGGAAAATCGTGTCTCGTCTCGTCTCGTCTTCGTCTCCCCCGATTCCCGAGCAGCTTCTCGAAACCCTCGCGGCCTCGATTCCGGCGATGGCGGAGCCCAACCCGCAAGTGGAGAGGGAGGTGGAGGTGGAGGAGGTGAGGAGGCCGAAGCTGAGGTACTTGGAGTTCGTGCAGGTGGCGGCAGCGCAGGCGACGATCTGCCTCGCGGGGCTCTACGCGCTTGCCAAGGACCACGCCGGCCCGCTCCGCCCCGGCGTCGACGCCGTCGAGTCCGCCGTCAAGGGCGTCGTCGGCCCCGTCTACGGGCGCTTCCATGGCGTCC



gi|87020217|gb|CI261081.1|CI261081 CI261081 Oryza sativa (japonica cultivar-group) Shoot and root of germinating seeds Oryza sat

CTGACGGTGGACACGATGGTG
||||||||| ||||.||||
CCCTGCCACCTCTGCTGCCAC

EST sequence (targeted fragment marked with yellow):
TTTTTTTTTTTTTTGTTGAAATCATCTGAGTATATTAATACGACGAGACAATAAAACTTTCAAACAAAAAAAAATGATAAGTACAGAAACCTTCAAGACCTACTCCCAGTTTATCGAGCTGTGTATAAAATTTAAAACTGTAAAACATCGTCCTATATTGCTGGGCTGATGGCATGCAACACAGCGACAGCCCGAAACACCCTCAACTCCACATCGACACATTTTAGAGCTGTCGCTGCCAAACCACCGAGCAAACATTATTATCATTATTCTCATTTATAATCAAACAGGTCGACTTTGAAGCCTGTGTTGTTCTTGTCATCGATCTACAATGCAGCCCTCTGCTGGCTGAAAGCCACCGGAATTTATGTGACCAGGTTGATGCCCTCGGCGAGGAGGGAGTCGGCGAGCACCTGGTTCGCCGCCTCCGACGGGTGGACGGCGTCCCAGAACACGTACGTCGTCGCGTTCGGGCAGGTGCCGATCGACTTGGGGTTGCACAGAAGCACCGTCGTCTCCACCGTCCCTGTCCCGCAGCATCCCCTCCTCG



gi|218505139|gb|FG959473.1|FG959473 MA_PA64s_07284 Mature embryo cDNA Library of PA64s Oryza sativa Indica Group cDNA 5', mRNA s

CTGACGGTGGACACGATGGTG
||||||.|||| |||.||.|
AACTGCCGCCTGAGCTGCCGC

EST sequence (targeted fragment marked with yellow):
GAGGAAAATCGTGTCTCGTCTCGTCTCGTCTTCGTCTCCCCCGATTCCCGAGCAGCTTCTCGAAACCCTCGCGGCCTCGATTCCGGCGATGGCGGAGCCCAACCCGCAAGTGGTGAGGGAGGTGGAGGTGGAGGAGGTGAGGAGGCCGAAGCTGAGGTACTTGGAGTTCGTGCAGGTGGCGGCAGCGCAGGCGACGATCTGCCTCGCGGGGCTCTACGCGCTTGCCAAGGACCACGCCGGCCCGCTCCGCCCCGGCGTCGACGCCGTCGAGTCCGCCGTCAAGGGCGTCGTCGGCCCCGTCTACGGCCGCTTCCATGGCGTCCCCCTCGACGTCCTCGCCTTCGTCGACCGCAAGGTGGATGACACGGTGCAAGAGCTGGACCGACACCTCCCGCCGACGCTGAAGGCCGCCTCCGCCAAGGCTTGCGCGGTGGCCCGCGGCGTGCCGGACGTGGCGAGGGAGCTCACCGCGGAGGTGCAGCAGTCGGGCGTCACCGGCGCCGCGCGCGTCGCGTACGCCAAGGTCGAGCCCGTGGCCAAGGGCGTGTACGGCAGGATCCAGCCGGCGGC



gi|88427450|gb|CI571653.1|CI571653 CI571653 Oryza sativa (japonica cultivar-group) shoot Oryza sativa Japonica Group cDNA clone

CTGACGGTGGACACGATGGTG
|.||||.|||| ||||.|.||
GGCTGCTACCTCTGCTGCTAC

EST sequence (targeted fragment marked with yellow):
GAGTTGATTGATTGCTTTGGTTGTTGGTTGGGTAGAGTCGTCGCCGGAGTTCATGGGGGCTGAGGCGAAGGCGCCGCTGCTGGAGGGGAGGAGGGGCGCGACGCCGGCGCAGACGCTGGGCAACATCGTCGTCTCCATCGTCGGCACCGGCGTGCTCGGCCTCCCCTACGCCTTCCGCACCTCCGGCTGGCTCGCCGGAGCTCTCGGCGTCGCCGGCGCCGGCGCCGCCACCTTCTACTGCATGCTCCTCCTTCTGGATTGCAGAGACAAGCTACGGGAGCAAGAAGAGGTGGATCACGACGGCAACTACACCTATGGCGACCTCGGCGAGAAATGCTTCGGCGCCATTGGGAGATACTTCACCGAGGTCACCATCATCCTCTCCCAGACCGGCGGCTCCGTCGCCTAACT



gi|86435228|gb|CI106461.1|CI106461 CI106461 Oryza sativa (japonica cultivar-group) Panicles less than 5cm stage Oryza sativa Jap

CTGACGGTGGACACGATGGTG
||||||||| ||||.||||
CCCTGCCACCTCTGCTGCCAC

EST sequence (targeted fragment marked with yellow):
TTTTTTTTTTAAAAAGAAGTGTTGAAATCATCTGAGTATATTAATACGACGAGACAATAAAACTTTCAAACAAAAAAAAATGATAAGTACAGAAACCTTCAAGACCTACTCCCAGTTTATCGAGCTGTGTATAAAATTTAAAACTGTAAAACATCGTCCTATATTGCTGGGCTGATGGCATGCAACACAGCGACAGCCCGAAAAACCCTCAACTCCACATCGACACATTTTAGAGCTGTCGCTGCCAAACCACCGAGCAAACATTATTATCATTATTCTCATTTATAATCAAACAGGTCGAGTTTGAAGCCTGTGTTGTTCTTGTCATCGATCTACAATGCAGCCCTCTGCTGGCTGAAAGCCACCGGAATTTATGTGACCAGGTTGATGCCCTCGGCGAGGAGGGAGTCGGCGAGCACCTGGTTCGCCGCCTCCGACGGGTGGACGGCGTCCCAGAACACGTACGTCGTCGCGTTCGGGCAGGTGCCGATCGACTTGGGGTAGCACAGAAGCACCGTCGTCTCCACCGTCCCTGTCCCGCAGCATCCCC



gi|29687506|gb|CB683781.1|CB683781 OSJNEf12K05.r OSJNEf Oryza sativa Japonica Group cDNA clone OSJNEf12K05 3', mRNA sequence

CTGACGGTGGACACGATGGTG
|||||..|||||||||.|..|
GACTGTTACCTGTGCTGCTGC

EST sequence (targeted fragment marked with yellow):
AGTGGATCCCCCGGGCTGCAGGAATTCGGCACGAGGCCTGAAACTTGTACAGAATTATACAATTGAGCTGGAGGATGGTGATGTCATTGTAACAGCAAGTGATGGTCTTTTTGACAATGTGTATGAGCAAGAAGTAGCCACCATGGTCTCGAAATCTTTACAAGCCGATCTCAAACCAACGGAGATTGCTGAACACCTGGCTGCCAAGGCGCAGGAAGTTGGTAGATCTGCAGCCGGAAGTACCCCATTCTCAGATGCCGCTCTTGCAGTGGGGTACCTGGGTTTCAGCGGGGGCAAACTCGATGACATAGCCGTCGTCGTGTCCATTGTCAGGAAATCTGAAATCTAAATTGTAAAAGACATCCATGATCCATGATGTCCCCCTCTCAAGTTTGGTTGAAGCTGCACTCCTAGCCTCCTAGCAAGGTGCACCACACTCATCAATATATTGTACAACCAGAAGTGCAGCTGCTGAAAAAGACTATCTGTGAGCGAGGAGCAAGAGGCCATTAACCTGTGTAAGTATCTTTGAGCCGAATTGCTCGCGGTTTTTGGGCTAATTTAGCATTGGAAAGTAATATTGTGATCCTTGGTTCGAGTTGTAAACCGGTGGAAGAAATCTGCCGTGTGTGTGAGAGACAACCGTGCATAGGAAAGGAACATACATTGATTATGTGACATGAACTGGAAATTGCCGCAAGACACCTCCTGGCACAGGCAACTGTAACCATCACACCTCATTTCACATTAAAAAAAAGAAAAAAAAACTCGAGGGGGGGCCCGGTACCCAGCTTTGTC



gi|89176821|gb|CI013394.1|CI013394 CI013394 Oryza sativa (japonica cultivar-group) etiolated shoot Oryza sativa Japonica Group c

CTGACGGTGGACACGATGGTG
|||||||||| |||||||||
CACTGCCACCTCTGCTACCAC

EST sequence (targeted fragment marked with yellow):
TTACTCACGATGCATAGAAAAAGTCAAATAGCCTGCAAATTTCAACCATTACAAGGTGCCAACAGATCCGCAGATCCGCATCGGTCGCTGAACATCGAACGCTGCCATGCCACCAAACAACATATAGCTTTTGTTCTCGATCAACAAACCAAGCATGACATGCCAATATTTACAAACATCAAACTAGCAAGCTCTGCATTAGTTGAGCTTTATTACCAGTACTAAGTATATTACTTAGCAACTATTATTTTGGCCTCTTGACAATCAGCACTGGGCATTTGCAGTTCTGCGCACAGTGATTGCTCACGCTTCCCAGGAACGCCCTCTGGATGAGGCCGTATCCATGGGTGCCCATGACCAGCAGATCGGCGGCCATCTTCTCGGTGGCGTCGCAGATGACGTCGCGCGGGTCCCCGCTCTCCACCATCGTCTCCACCGTCACGTGAGGGAAAGCGGCGCAGATGTGCTTGGCCTTGCCCACCGCCGCGGCGGAGACGGCGGCGGCGTACTTGTCCATGCTCGCCATCACGTCCGAGGTCATCATGTACC



gi|58599842|gb|CK010370.1|CK010370 33149rsicef_6493.y1 Oryza sativa cv. PA64s panicle sterile cDNA library Oryza sativa Indica G

CTGACGGTGGACACGATGGTG
||||||.|||| |||.||.|
AACTGCCGCCTGAGCTGCCGC

EST sequence (targeted fragment marked with yellow):
GCACGAGGGGGAAAGTAGAAAGAAAGAAAAGAAAAAAAAAAGGAAAATCGTGTCTCGTCTCGTCTCGGTCTTCGTCTCCCCCGATTCCCGAGCAGCTTCTCGAAACCCTCGCGGGCTCGATTCCGGCGATGGCGGAGCCCAACCCGCAAGTGGTGAGGGAGGTGGAGGTGGAGGAGGTGAGGAGGCCGAAGCTGAGGTACTTGGAGTTCGTGCGGGTGGCGGCAGCGCAGGCGACGATCTGCCTCGCGGGGCTCTACGCGCTTGCCAAGGACCACGCCGGGCCGCTCCGCCCCGGCGTCGACGCCGTCGAGTCCGCCGTCAAGGGCGTCGTCGGGCCCGTCTACGGGCGCTTCCATGGCGTTCCCCTCGACGTCCTCGCCTTCGTCGACCGCAAGGTGGATGACACGGTGCAAGAGCTGGACCG



gi|86527698|gb|CI167904.1|CI167904 CI167904 Oryza sativa (japonica cultivar-group) shoot and callus Oryza sativa Japonica Group

CTGACGGTGGACACGATGGTG
|||||||||| |||||||||
CACTGCCACCTCTGCTACCAC

EST sequence (targeted fragment marked with yellow):
AGAAAAAGTCAAATAGCCTGCAAATTTCAACCATTACAAGGTGCCAACAGATCCGCAGATCCGCATCGGTCGCTGAACATCGAACGCTGCCATGCCACCAAACAACATATAGCTTTTGTTCTCGATCAACAAACCAAGCATGACATGCCAATATTTACAAACATCAAACTAGCAAGCTCTGCATTAGTTGAGCTTTATTACCAGTACTAAGTATATTACTTAGCAACTATTATTTTGGCCTCTTGACAATCAGCACTGGGCATTTGCAGTTCTGCGCACAGTGATTGCTCACGCTTCCCAGGAACGCCCTCTGGATGAGGCCGTATCCATGGGTGCCCATGACCAGCAGATCGGCGGCCATCTTCTCGGTGGCGGTCGCAGATGACGTCGCGCGGGTCCCCGCTCTCCACCATCGTCTCCACCGTCACGTGAGGGAAAGCCGGCGCAGATGTGCTTGGCCTTGCCCACCGCCGCGGCGGAGACGGCGGCGGCGTACTTGT



gi|88400402|gb|CI593477.1|CI593477 CI593477 Oryza sativa (japonica cultivar-group) flower Oryza sativa Japonica Group cDNA clone

CTGACGGTGGACACGATGGTG
||||||.|||| |||.||.|
AACTGCCGCCTGAGCTGCCGC

EST sequence (targeted fragment marked with yellow):
GGAAGGGAAAGTAAGAAAGAAAGAAAAGAAAAAAAAAAAGGAAAATCGTGTCTCGTCTTGTCTTGTCTTCGTCTCCCCCGATTCCCGAGCAGCTTCTCGAAACCCTCGCGGCCTCGATTCGGCGATGGCGGAGCCCAACCCGCAAGTGGAGATGGAGGTGGAGGTGGAGGAGGTGAGGAGGCCGAAGCTGAGGTACTTGGAGTTCGTGCAGGTGGCGGCAGCGCAGGCGACGATCTGCCTCGCGGGGCTCTACGCGCTTGCCAATGACCACGCGGCCCGCTCTGCCCCGGCGTCGACGCCGTCGAGTCCGCCGTCAAGGGCGTCGTCGGCCCCGTCTACGGCCGCTTCATGGCGTCCCCTTGACGTCCTCGGCTTGTCGACGAATGTGGATGACAGGTGAAGAGCTG



gi|109711594|gb|CI013199.1|CI013199 CI013199 Oryza sativa (japonica cultivar-group) etiolated shoot Oryza sativa Japonica Group

CTGACGGTGGACACGATGGTG
|.|||||||||| || |||.|
GGCTGCCACCTGAGCGACCGC

EST sequence (targeted fragment marked with yellow):
TTTTTTTATTTATTCACTTATTACTTCATTGAATCCAAATTATGTGCAGAAACACACATATTTTAACACAACGAATTGAACAAGACCGATCGATCGATGTACAAACAGAAAACTGGCAAACCCAACGAATCACTCCTTTGCAATTTATATACGTGTCAACACACACATTTTCAATCGATCGTGTATACACAATCTACAAATGGTCCGTAGTCGTCGCCGTCGTAGTGCCATTTTTCTCAGTTGAAGACGTCACACTGCTTCCGGATGTTGCCCTTGCCGCCGGACTTGACCCCGACGCGGCCGAGCTTGACGATGGCGTCGGCGAAGGCCTTGTAGAAGTCCGGCGTGCTGGCCGCCAGCGAGTCCACCGTCGGCCGCGTGCGGTTGTCGGTGTAGAGCAGCTCGTCGGAGGCGAGCAAGCCGCCGCCGTCCTGCAGGTTCCGGTAGTACTGGTTGTCGAAGAGCGCCGGCGTGGCCTGGTCCATG



gi|66914130|gb|CX100978.1|CX100978 RECm1907 A normalized whole-life-cycle cDNA library of rice Oryza sativa Indica Group cDNA cl

CTGACGGTGGACACGATGGTG
|.||||||||| | | |||||
GGCTGCCACCTCTCCCACCAC

EST sequence (targeted fragment marked with yellow):
TTCATCACCACCCTCTCCACCGTCGGCTACGGCTGACATGCACGCCGAGAACACCGGAGAGATGGTCTACACCACCGCCTACATGCTCTTCAACCTCAGCCTCACCGCCTACATCATCGGCAACATGACCAACCCTGTCGTCCATGGCACCAGCCGCACCAGGAAATTCGTTAGTAGTCACTTTCTTTGATCGATCCCTTGCTGTTTCTTGATCAACAGCAATTCTTTGGTGTTCTATCTTGGTTCAGTATACTCTAGTACTCACAAGTCACATCAAAAAAAAAAA



gi|89172060|gb|CI721119.1|CI721119 CI721119 Oryza sativa (japonica cultivar-group) 9 leaf-stage leaf Oryza sativa Japonica Group

CTGACGGTGGACACGATGGTG
|.|||||.||| ||||.||.|
GGCTGCCGCCTCTGCTGCCGC

EST sequence (targeted fragment marked with yellow):
GATGTCGCCGGACGGTCGCCGCACACGCCACAGTCGTCGTTGCACACACGCGCCGCCGTTGTTGTCGTCCTCTTCTCCTCCGACGTCGTCGTCGCCGTCGCCGTCGTGAACATGGCGGCGGAGGCGGAGCAGCAGCACCAGCTGCTGTCGACGGCCGTGCACGACACGATGCCGGGGAAGTACGTCCGCCCGGAGTCGCAGCGCCCGCGCCTCGACCTCGTCGTCTCCGACGCCCGCATCCCCGTCGTCGACCTCGCCTCCCCCGACCGCGCCGCCGTCGTCTCCGCCGTCGGCGACGCCCTGCCGCACCCACGGCTTCTTCCAGGTGGTGAACCATGGCATCGATGCGGCGCTGATCGCGTCGGTCATGGAGGTGGGCCGCGAGTTCTTCCGGCTGCCG



gi|218491142|gb|FG948652.1|FG948652 MA_93-11_05547 Mature embryo cDNA Library of 93-11 Oryza sativa Indica Group cDNA 5', mRNA s

CTGACGGTGGACACGATGGTG
||||||.|||| |||.||.|
AACTGCCGCCTGAGCTGCCGC

EST sequence (targeted fragment marked with yellow):
CGCGTGGCGGCCGCCTAAATAGTGGATCCCCGGGCTGCAGAATTCGAATCCGCCGGCCCGCTCCGCCCCGGCGTCGACGCCGTCGAGTCCGCCGTCAAGGGCGTCGTCGGCCCCGTCTACGGCCGCTTCCATGGCGTCCCCCTCGACGTCCTCGCCTTCGTCGACCGCAAGGTGGATGACACGGTGCAAGAGCTGGACCGACACCTCCCGCCGACGCTGAAGGCCGCCTCCGCCAAGGCTTGCGCGGTGGCCCGCGGCGTGCCGGACGTGGCGAGGGAGCTCACCGCGGAGGTGCAGCAGTCGGGCGTCACCGGCGCCGCGCGCGTCGCGTACGCCAAGGTCGAGCCCGTGGCCAAGGGCGTGTACGGCAGGATCCAGCCGGCGGCCAAGGACCTCTACGTGCGCTACGAGCCGGCGGCGGAGCACCTCGCCGTCTCCACCTGGCGCTCTCTCAACAACCTGCCGCTGTTCCCGCAGGTGGCGCAGATCGCCGTGCCCACCGCCGCCTACTGGGCCGAGAAGTACAACAAGGTGATCGCCGCCGCGGCCGACAAGGGTTACACCGGAGCACAGTACCTCCCCGCCATCCCCACCGAGCGCATCGCCA



gi|86855389|gb|CI266918.1|CI266918 CI266918 Oryza sativa (japonica cultivar-group) Shoot and root of germinating seeds Oryza sat

CTGACGGTGGACACGATGGTG
||||||||| ||||.||||
CCCTGCCACCTCTGCTGCCAC

EST sequence (targeted fragment marked with yellow):
TAAAAAGAAGTGTTGAAATCATCTGAGTATATTAATACGACGAGACAATAAAACTTTCAAACAAAAAAAAATGATAAGTACAGAAACCTTCAAGACCTACTCCCAGTTTATCGAGCTGTGTATAAAATTTAAAACTGTAAAACATCGTCCTATATTGCTGGGCTGATGGCATGCAACACAGCGACAGCCCGAAACACCCTCAACTCCACATCGACACATTTTAGAGCTGTCGCTGCCAAACCACCGAGCAAACATTATTATCATTATTCTCATTTATAATCAAACAGGTCGAGTTTGAAGCCTGTGTTGTTCTTGTCATCGATCTACAATGCAGCCCTCTGCTGGCTGAAAGCCACCGGAATTTATGTGACCAGGTTGATGCCCTCGGCGAGGAGGGAGTCGGCGAGCACCTGGTTCGCCGCCTCCGACGGGTGGACGGCGTCCCAGAACACGTACGTCGTCGCGTTCGGGCAGGTGCCGATCGACTTGGGGTTGCACAGAAGCACCGTCGTCTCCACCGTCCCTGTCCCGCAGCATCCCCTCCTCGCCT



gi|157650606|gb|EX450240.1|EX450240 SSH001114 Osmotic stress SSH library Oryza sativa Japonica Group cDNA, mRNA sequence

CTGACGGTGGACACGATGGTG
|| ||||||| ||.||||||
CACCGCCACCTATGTTACCAC

EST sequence (targeted fragment marked with yellow):
TGCCCACCACTATAGGCAGATCCAGAACCGCTTCCAGAGCCACTTCCATATCCATGGCCACCTGGGCCACTCTGCCCTCCGCCGCCGCCGCCACCTTGACCACCTGCATGAGCATAGCCACCACCGTAGGGCCCGTATGAACCAGCTTGGCCGTAACCAGATCCAGAACCAGAACCATAACCTGATCCACCATTGTATCCACCGCCACCACCACCACCTTGTCCGCCACCCTGAGCATATGCTCCACCATGAGGACCGTAGCCACCAGCCTGACCATAGCCAGAGCCAGATCCGGAACCATATCCAGACCCACCATTTGCCCCACCACCTCCACCACCACCTTGACCGCCTCCTTGAGCGTACCTGCCCGGGCGGCCGCTCAAA



gi|117223926|gb|CT842103.1|CT842103 CT842103 Oryza sativa (indica cultivar-group) cv. Guang Lu Ai 4 Oryza sativa Indica Group cD

CTGACGGTGGACACGATGGTG
| ||||||||| ||||||||
GCCTGCCACCTCGGCTACCAC

EST sequence (targeted fragment marked with yellow):
ATGCATGCCAAGAGGTTTAGCAAGATGGCTCGGCCGTCGTCGTCGTGGTGGATGGCGCTGCTCGTCGTCGCCGCCGTGGCGCAGCTCGGCGCGTCCGACCTGAGGACGGACTACTACAACAGCACGTGCCCCAACGTCGAGAGCATCGTGCTCGGCGTGGTGAAGGACAAGATGCAGGCCACCATCCGCACCATCGGCTCCACCGTCCGCCTCTTCTTCCACGACTGCTTCGTCGATGGGTGTGACGGCTCGGTGCTGATCACGTCGACGGCGGGCAACACGGCGGAGAGGGACGCGCCCGACAACCTCTCGCTGGCGTTCGAGGGATTCGAGACGGTGAGGAGCGCCAAGGCCGCCGTCGAGGCCGCGTGCCCCGACCAGGTCTCCTGCACCGACGTGCTCGCCATCGCCACGCGCGACGCCATCGCCCTGAGCGGTGGGCCATTCTTCCCGGTGGAGCTGGGCAGGCTGGACGGCATGAGGTCCAGCGCCAGCAACGTCGCCGGCAAGCTGCCGCAGCCGAACAACACCCTCAGCGAGCTCGTCGCCATCTTCAAATCCAACGGCCTCAACATGTCTGACATGGTCGCGCTCTCAGCGGCGCACAGCGTCGGGCTGGCGCACTGCAGCAAGTTCTCGGACCGGCTGTACCGCTACAACCCGCCGTCGCAGCCGACGGACCCGACGCTGAACGAGAAGTACGCGGCGTTCCTCAAGGGCAAGTGCCCCGACGGCGGGCCGGACATGATGGTGCTCATGGACCAGGCCACGCCGGCGCTCTTCGACAACCAGTACTACCGGAACCTGCAGGACGGCGGCGGCTTGCTCGCCTCCGACGAGCTGCTCTACACCGACAACCGCACGCGGCCGACGGTGGACTCGCTGGCGGCCAGCACGCCGGACTTCTACAAGGCCTTCGCCGACGCCATCGTCAAGCTCGGCCGCGTCGGGGTCAAGTCCGGCGGCAAGGGCAACATCCGGAAGCAGTGTGACGTCTTCAACTGAGAAAAATGGCACTACGACGGCGACGACTACGGACCATTTGTAGATTGTGTATACACGATCGATTGAAAATGTGTGTGTTGACACGTATATAAATTGCAAAGGAGTGATTCGTTGGGTTTGCCAGTTTTCTGTTTGTACATCGATCGATCGGTCTTGTTCAATTCGTTGTGTTAAAATATGTGTGTTTCTGCACATAAATTTGGATTCATGAAAGTATAAGTGAATTACAAAAAAAAAAAACAGAGGAAGCGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA



gi|88689268|gb|CI732844.1|CI732844 CI732844 Oryza sativa (japonica cultivar-group) library (Kikuchi S) Oryza sativa Japonica Gro

CTGACGGTGGACACGATGGTG
||||||.|||| |||.||.|
AACTGCCGCCTGAGCTGCCGC

EST sequence (targeted fragment marked with yellow):
TGGCTTGAAGGGAAAGTAAGAAAGAAAGAAAAGAAAAAAAAAAGGAAAATCGTGTCTCGTCTCGTCTCGTCTTCGTCTCCCCCGATTCCCGAGCAGCTTCTCGAAACCCTCGCGGCCTCGATTCCGGCGATGGCGGAGCCCAACCCGCAAGTGGAGAGGGAGGTGGAGGTGGAGGAGGTGAGGAGGCCGAAGCTGAGGTACTTGGAGTTCGTGCAGGTGGCGGCAGCGCAGGCGACGATCTGCCTCGCGGGGCTCTACGCGCTTGCCAAGGACCACGCCGNGCCGCTCCGCCCCGGCGTTGACGCCGTCGAGTCCGCCGTCAAGGGCGTCGTCGGCCCCGTCTACGGCCGGCTTCATGGCGTCCCCC



gi|89172569|gb|CI721628.1|CI721628 CI721628 Oryza sativa (japonica cultivar-group) library (Kikuchi S) Oryza sativa Japonica Gro

CTGACGGTGGACACGATGGTG
|.|||||.||| ||||.||.|
GGCTGCCGCCTCTGCTGCCGC

EST sequence (targeted fragment marked with yellow):
GATGTCGCCGGACGGTCGCCGCACACGCCACAGTCGTCGTTGCACACACGCGCCGCCGTTGTTGTCGTCCTCTTCTCCTCCGACGTCGTCGTCGCCGTCGCCGTCGTGAACATGGCGGCGGAGGCGGAGCAGCAGCACCAGCTGCTGTCGACGGCCGTGCACGACACGATGCCGGGGAAGTACGTCCGCCCGGAGTCGCAGCGCCCGCGCCTCGACCTCGTCGTCTCCGACGCCCGCATCCCCGTCGTCGACCTCGCCTCCCCCGACCGCGCCGCCGTCGTCTCCGCCGTCGGCGACGCCTGCCGCACCCACGGNTTCTTCCAGGTGGTGAACCATGGCATCGATGCGGNGCTG



gi|86536053|gb|CI176259.1|CI176259 CI176259 Oryza sativa (japonica cultivar-group) supermix Oryza sativa Japonica Group cDNA clo

CTGACGGTGGACACGATGGTG
|||||||||| |||||||||
CACTGCCACCTCTGCTACCAC

EST sequence (targeted fragment marked with yellow):
TTTTTTGCCACCAAACAACATATAGCTTTGTTCTCGATCAACAAACCAAGCATGACATGCCAATATTTACAAACATCAAACTAGCAAGCTCTGCATTAGTTGAGCTTTATTACCAGTACTAAGTATATTACTTAGCAACTATTATTTTGGCCTCTTGACAATCAGCACTGGGCATTTGCAGTTCTGCGCACAGTGATTGCTCACGCTTCCCAGGAACGCCCTCTGGATGAGGCCGTATCCATGGGTGCCCATGACCAGCAGATCGGCGGCCATCTTCTCGGTGGCGTCGCAGATGACGTCGCGCGGGTCCCCGCTCTCCACCATCGTCTCCACCGTCACGTGAGGGAAAGCGGCGCAGGTGTGCTTGGCCTTGCCCACCGCCGCGGCGGAGACGGCGGCGGCGTACTTGTCCATGCTCGCCATCACGTCCGAGGTCATCATGTACCCTGAGCTGTCCATGGCGGCGTACACGGGGCGGGGGCGGCGGGCGTGGAGCAGCACGAGCGTGTCGCCGCCGGAGGAGGAGACGACGTTGGCGAGGCACCAGGTG



gi|86869941|gb|CI316669.1|CI316669 CI316669 Oryza sativa (japonica cultivar-group) shoot Oryza sativa Japonica Group cDNA clone

CTGACGGTGGACACGATGGTG
|||||||||| |||||||||
CACTGCCACCTCTGCTACCAC

EST sequence (targeted fragment marked with yellow):
GCTCAGATGCATAGAAAAAGTCAAATAGCCTGCAAATTTCAACCATTACAAGGTGCCAACAGATCCGCAGATCCGCATCGGTCGCTGAACATCGAACGCTGCCATGCCACCAAACAACATATAGCTTTTGTTCTCGATCAACAAACCAAGCATGACATGCCAATATTTACAAACATCAAACTAGCAAGCTCTGCATTAGTTGAGCTTTATTACCAGTACTAAGTATATTACTTAGCAACTATTATTTTGGCCTCTTGAAAATCAGCACTGGGCATTTGCAGTTCTGCGCACAGTGATTGCTCACGCTTCCCAGGAACGCCCTCTGGATGAGGCCGTATCCATGGGTGCCCATGACCAGCAGATCGGCGGCCATCTTCTCGGTGGCGTCGCAGATGACGTCGCGCGGGTCCCCGCTCTCCACCATCGTCTCCACCGTCACGTGAGGGAAAGCGGCGCAGATGTGCTTGGTCTTGCCCACCGCCGGGGCGGAGACGGCGGCGGGGTACTTGTCCATGCTCGCCA



gi|218504974|gb|FG955610.1|FG955610 MA_PA64s_03421 Mature embryo cDNA Library of PA64s Oryza sativa Indica Group cDNA 5', mRNA s

CTGACGGTGGACACGATGGTG
||| |||||||| ||||.||
GACAGCCACCTGCACTACTAC

EST sequence (targeted fragment marked with yellow):
ATTCCGAGATTCTATCGCTGCGAAAAGATGATCAAGATGCGGGTGACGCAGCAGAGCTCGGTCTGTCCGCCCACCTTCCTGCCGGCGCCGTGGTCGCCGCTCGGCCTCACGGATCGCACCCTCACCTCCTTCCTCGCCACCGACGACGACACCTTCAACTACGCCGAGCCCCTCGCAGCGCGCTGCGGCATTGTCCTGATGCGGCTTGTCCCCCGCACCGCGCTGATGATAGCGTGCAGCCACCTCCTCGGCGTCTGCAACCCGATCACCGGGGAATGCCACGTTCTCCCGCCTCTGAATCTCTCCGGCCTCCATCGCTACTTGACCAGCTACGCCATCATCACGTCCACCGACAGCGACCTAGATGGGAAGCAGCC



gi|88763968|gb|CI773384.1|CI773384 CI773384 Oryza sativa (japonica cultivar-group) root of seedling 2ppm BAP(benzyl amino purine

CTGACGGTGGACACGATGGTG
|||||||..|| |||||.||
GACTGCCGTCTAAGCTACTAC

EST sequence (targeted fragment marked with yellow):
ATTGCAGAGTTCAGTGTAACAAAGACACTGAAGCTACAGCCTACAGAGAGAGAGTATCTGGATACTTAATTGTGTGCTTAGCTTGCGGTTAAGCAATGGCTTATTCCAGGCAAATCTTCGTCTGCTCTGCCATGGCTGCGTTGCTCTTCTCTGCTGTTGTTTCGGCGCAGCTCTCCACTGATTTCTACGACGAGACATGCCCCGACGCGCTCGACATCATCGAATCTGCCGTCAGAGACGCCGTTTCCAAGGAGTCTCGCATGGGAGCTTCGCTGCTGCGCCTCCATTTCCACGACTGCTTTGTCAATGGGTGTGACGGGTCAGTGCTGCTCGACGACACGGCGGCCATCACCGGCGAGAAGAACGCGAAGCCG



gi|109711537|gb|CI013142.1|CI013142 CI013142 Oryza sativa (japonica cultivar-group) etiolated shoot Oryza sativa Japonica Group

CTGACGGTGGACACGATGGTG
||||||||| ||||.||||
CCCTGCCACCTCTGCTGCCAC

EST sequence (targeted fragment marked with yellow):
TCGGCTGCCAAACACGAGCAAACATTATTATCATTATTCTCATTTATAATCAAACAGGTCGAGTTTGAAGCCTGTGTTGTTCTTGTCATCGATCTACAATGCAGCCCTCTGCTGGCTGAAAGCCACCGGAATTTATGTGACCAGGTTGATGCCCTCGGCGAGGAGGGAGTCGGCGAGCACCTGGTTCGCCGCCTCCGACGGGTGGACGGCGTCCCAGAACACGTACGTCGTCGCGTTCGGGCAGGTGCCGATCGACTTGGGGTTGCACAGAAGCACCGTCGTCTCCACCGTCCCTGTCCCGCAGCATCCCCTCCTCGCCTCCGTGAATCCTTGGGATTGAGGAGAGGTGACGAGGTCGTAGAGGGGCGTGTAGATGTCGAACACGGCGATCTTGAGGTCGGAGTAGGTCTTCGAAAGCGAGTCGACGGTGACGTTCATCTTGCCGTTGAAGTTCTGGGCGTCGCTGTTGAGCCTCGAGACGCACCCGCTGCTGCCGTAGCCGAACAGCGTGATCGCCGCCGGTAGGCAGCCCAACGGCGGCAGCGAC



gi|55411984|gb|CV724360.1|CV724360 root--06-M06.g1 Rice root lambda phage cDNA library (root) Oryza sativa Japonica Group cDNA c

CTGACGGTGGACACGATGGTG
|.|||||||||| || |||.|
GGCTGCCACCTGAGCGACCGC

EST sequence (targeted fragment marked with yellow):
GCACGAGGCCTCGTGCCGAATTCGGCACGAGGTATTACTTCATTGAATCCAAATTATGTGCAGAAACACACATATTTTAACACAACGAATTGAACAAGACCGATCGATCGATGTACAAACAGAAAACTGGCAAACCCAACGAATCACTCCTTTGCAATTTATATACGTGTCAACACACACATTTTCAATCGATCGTGTATACACAATCTACAAATGGTCCGTAGTCGTCGCCGTCGTAGTGCCATTTTTCTCAGTTGAAGACGTCACACTGCTTCCGGATGTTGCCCTTGCCGCCGGACTTGACCCCGACGCGGCCGAGCTTGACGATGGCGTCGGCGAAGGCCTTGTAGAAGTCCGGCGTGCTGGCCGCCAGCGAGTCCACCGTCGGCCGCGTGCGGTTGTCGGTGTAAAGCAGCTCGTCGGAGGCGAGCAAGCCGCCGCCGTCCTGCAGGTTCCGGTAGTACTGGTTGTCGAAGAGCGCC



gi|88399678|gb|CI583412.1|CI583412 CI583412 Oryza sativa (japonica cultivar-group) shoot Oryza sativa Japonica Group cDNA clone

CTGACGGTGGACACGATGGTG
||||||.|||| |||.||.|
AACTGCCGCCTGAGCTGCCGC

EST sequence (targeted fragment marked with yellow):
GGCTTGAAGGGAAAGTAAGAAAGAAAGAAAAGAAAAAAAAAAGGAAAATCGTGTCTCGTCTCGTCTCGTCTTCGTCTCCCCCGATTCCCGAGCAGCTTCTCGAAACCCTCGCGGCCTCGATTCCGGCGATGGCGGAGCCCAACCCGCAAGTGGAGAGGGAGGTGGAGGTGGAGGAGGTGAGGAGGCCGAAGCTGAGGTACTTGGAGTTCGTGCAGGTGGCGGCAGCGCAGGCGACGATCTGCCTCGCGGGGCTCTACGCGCTTGCCAAGGACCACGCCGGCCCGCTCCGCCCCGGCGTCGACGCCGTCGAGTCCGCCGTCAA



gi|30227963|gb|CB965855.1|CB965855 NL27_F08 Drought stress (leaf) Oryza sativa Indica Group cDNA clone NL27_F08 3', mRNA sequenc

CTGACGGTGGACACGATGGTG
|||||||||| |||||||||
CACTGCCACCTCTGCTACCAC

EST sequence (targeted fragment marked with yellow):
GGCATTTGGCACTTGCTGGCGCACAGTCGATTGGCTCACGCTTGCCCTAGGAACGCCCTGCGGGATGAGGCCGTATCCATGGGCTGCCCATGACCAGCAGATCGCCGGCCAGCTTCTCGGTCGGCGGCGCAGATGACGTGCGCAGCGGGTCCCCGCGCGCCACCATCGTCTCCACCGTCACGTGAGGGAAAGCGGCGCAGATGTGCTTGGCCTTGCCCACCGCCGCGGCGGAGACGGCGGCGGCGTACTTGTCCAGGCTCGCCATCACGTCCGAGGTCATCATGTACCCTGAGCTGTCCATGGCGGCGTAGACGGGGCGGGGGCGGCGGGCGTGGAGCAGCACGAGCGTGTCGCCGCCGGAGGAGGAGACGACGTTGGCGAGGCACCAGGTGAGCGCGTGCGTGCTCTCCTCGCTCTCGTCCACGGCCACCACGATGCGTCGCCCGGGAGCCTCACCGCAGCAGCAGCAGGGTCAGCA



gi|58684906|gb|CK073593.1|CK073593 73683rsicem_7242.y1 Oryza sativa cv. PA64s panicle ferile cDNA library Oryza sativa Indica Gr

CTGACGGTGGACACGATGGTG
|||| |||||| ||| .||||
GACTTCCACCTCTGCCGCCAC

EST sequence (targeted fragment marked with yellow):
TAGTGGATCCCCGGGCTGCAGGATTCGGCACGAGGGCCGTCATTTCGTCGCTGACCGCCGCCAGTTCGCCGCTATCGACGCCGCCGTGAGGCACCACCGACGCCGCCGAGGTGCGCCGTTGACGCCGTTGAGGTGCGCCGCCTATTCCACCGCTGGTGGGGCGCCGCCGACGCCGCCGCGGGGGCGCTGCCGACGCCACCGCCGCCGATTCCACCGCCGTCTCCACCTTCAGTGATAGCGCCGCCGCTACCCCCTCCATTTCCGCTGCCGCCTTGCTTCCACCGCCACCTCCCACCGCCACCGTCCACTATCCGCCGCCGCCGCGTCCCTCTCGTCGGCCGGCGGCATGCCGGCCGGCTTTAGGCCGACGGTCCCGACTCCTCATCGGAGTTGGAGACCGGCCAGACCCTAACACCGTTCCCC



gi|218504374|gb|FG945453.1|FG945453 MA_93-11_02348 Mature embryo cDNA Library of 93-11 Oryza sativa Indica Group cDNA 5', mRNA s

CTGACGGTGGACACGATGGTG
||||||.|||| |||.||.|
AACTGCCGCCTGAGCTGCCGC

EST sequence (targeted fragment marked with yellow):
TGAAGGGAAAGTAAGAAAGAAGGAAAAGAAAAAAAAAAAGGAAAATCGTGTCTCGTCTCGTCTCGTCTTCGTCTCCCCCGATTCCCGAGCAGCTTCTCGAAACCCTCGCGGCCTCGATTCCGGCGATGGCGGAGCCCAACCCGCAAGTGGAGAGGGAGGTGGAGGTGGAGGAGGTGAGGAGGCCGAAGCTGAGGTACTTGGAGTTCGTGCAGGTGGCGGCAGCGCAGGCGACGATCTGCCTCGCGGGGCTCTACGCGCTTGCCAAGGACCACGCCGGCCCGCTCCGCCCCGGCGTCGACGCCGTCGAGTCCGCCGTCAAGGGCGTCGTCGGACCCGTCTACGGCCGCTTCCATGGCGTCCCCCTCGACGTCCTCGCCTTCGTCGACCGCAAGGTGGATGACACGGTG



gi|218493698|gb|FG946841.1|FG946841 MA_93-11_03736 Mature embryo cDNA Library of 93-11 Oryza sativa Indica Group cDNA 5', mRNA s

CTGACGGTGGACACGATGGTG
||||||.|||| |||.||.|
AACTGCCGCCTGAGCTGCCGC

EST sequence (targeted fragment marked with yellow):
GGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTCAATTCCACGATCTGCCTCGCGGGGCTCTACGCGCTTGCCAAGGACCACGCCGGCCCGCTCCGCCCCGGCGTCGACGCCGTCGAGTCCGCCGTCAATGGCGTCGTCGGCCCCGTCTACGGCCGCTTCCATGTGCGTCCCCCTC



gi|117224553|gb|CT860429.1|CT860429 CT860429 Oryza sativa (indica cultivar-group) cv. Guang Lu Ai 4 Oryza sativa Indica Group cD

CTGACGGTGGACACGATGGTG
|.|||||||||| ||||..|
AATTGCCACCTGTTCTACTGC

EST sequence (targeted fragment marked with yellow):
ACACACACAACAACAACTTACATCGCAAGCTAGCTAGATCGATGGCGATGACCAATTGCCTCCTCGCGCTCGCCATCGCGGGCGTCGTGCTCGTCTCCCTCCCTGGACTCTCGCGCGGCGACGGCGAGTGCAACCCGAGCGGCGCGATCCGGTCGAGCACGACCCACCGGTGCCAGGACTGCTGCAAGGCCGGCCAATCCTACCCGACGTACACTTGCTCGCCGCCGACCACCGGGAGCAGCACCGACGCGGTGATGACGCTGAACGACTTCGACGCCAGCGGCGACGGCGGCGGCCCGTCGGAGTGCGACGAGATGTACCACAGCAACACGGAGCTGGTGGTGGCGCTGTCCACGGGGTGGTACGCCGGCGGCAGCCGCTGCGGCAAGAGCGTCCGGATCAACGCCAACGGCAGGTCCGTGCTCGCCAAGGTGGTCGACGAGTGCGACTCCCAACGCGGCTGCGACGAGGAGCACGCCTACCAGCCGCCGTGCCGCCCCAACGTCTTCTACGCGTCGCAGGCCGTGTGGGACGCGCTCGGCATCACCGGTGAGGACGTCGGCGAGTACGATATTCACTTGGTCGGACCCATGACATCCAAACTTTTTTCCATCATTGTCATCAATTACGAAATTTAACTTATGAGATTCGGGTACCGTACTCGGGTGGATTTAAAGTCTTAATAACCAAGCACGGTCACATCACGAAATGAATAAATTATTAAAACCCCTTGTAATAAAGGGACCACGGGCCATTTGTGGCAAAAAAACCCCTTACCCGCCAAAGCACCTCTTGAAAAATGAACCCTGGCAACTAACGTTGTTCCAACCAATTTTTTACCCCTTAAAAAATACTGGGAATTTCTCTTTTAAATTTAGCGTTTGGAGGCCCTTTTTTTCAAAAAAAAAAAAAAAAAAAAAAAAGGGCCCCCTGTGGCCTTCCATGGCGGGGCCCCCGGCCCCCTCTTCCTCTCCCACAAGGGGGTGTGAAAATAAAACTCATCACTCCACTGGATTCTTTCTTTTTTTTCTCACCTTCCCTTAGCAGATGGCAAAAAACACGAGGGAGTTTTCTCCTCACCTTTAATCCGCCACAGTGTGACATAGATTTACCCCCCCTTTATTCTCCCGCAGTGTGTGTATGGAGAATAAAAGGATAAAAAATAGCCCGCCCACTTCCTTGATCTGCGCCCCGTTCGTAATAACAATACTTCTGGTTACGTCATCTTGTCCACCGTTAATTAATCGGCTGCTGATATAAGAGATAATAGGTATATATTGACCGCTCTCACTACACTTTCTATGTATCTATACCTGGCACTCTAATCTCTTAATACTT



gi|86492117|gb|CI134750.1|CI134750 CI134750 Oryza sativa (japonica cultivar-group) Panicles less than 5cm stage and Panicles two

CTGACGGTGGACACGATGGTG
|||||||||| |||||||||
CACTGCCACCTCTGCTACCAC

EST sequence (targeted fragment marked with yellow):
TAGAAAAAGTCAAATAGCCTGCAAATTTCAACCATTACAAGGTGCCAACAGATCCGCAGATCCGCATCGGTCGCTGAACATCGAACGCTGCCATGCCACCAAACAACATATAGCTTTTGTTCTCGATCAACAAACCAAGCATGACATGCCAATATTTACAAACATCAAACTAGCAAGCTCTGCATTAGTTGAGCTTTATTACCAGTACTAAGTATATTACTTAGCAACTATTATTTTGGCCTCTTGACAATCAGCACTGGGCATTTGCAGTTCTGCGCACAGTGATTGCTCACGCTTCCCAGGAACGCCCTCTGGATGAGGCCGTATCCATGGGTGCCCATGACCAGCAGATCGGCGGCCATCTTCTCGGTGGCGTCGCAAATGACGTCGCGCGGGTCCCCGCTCTCCACCATCGTCTCCACCGTCACGTGAGGGAAAGCGGCGCAGATGTGCTTGGCCTTGCCCACCGCCGCGGCGGAGACGGCGGCGGCGTACTTGTC



gi|88363749|gb|CI609106.1|CI609106 CI609106 Oryza sativa (japonica cultivar-group) callus Oryza sativa Japonica Group cDNA clone

CTGACGGTGGACACGATGGTG
||||||.|||| |||.||.|
AACTGCCGCCTGAGCTGCCGC

EST sequence (targeted fragment marked with yellow):
GTTTGGGAAAGTAAGAAAGAAAGAAAAGAAAAAAAAAAGGAAAATCGTGTCTCGTCTCGTCTCGTCTTCGTCTCCCCCGATTCCCGAGCAGCTTCTCGAAAACCTCGCGGCCTCGATTCCGGCGATGGCGGAGCCCAACCCGCAAGTGGAGAGGGAGGTGGAGGTGGAGGAGGTGAGGAGGCCGAAGCTGAGGTACTTGGAGTTCGTGCAGGTGGCGGCAGCGCAGGCGACGATCTGCCTCGCGGGGCTCTACGCGCTTGCCAAGGACCACGCCGGCCCGCTCCGCCCCGGCGTCGACGCCGTCGAGTCCGCCGTCAAGGGCGTCGTCGGCCCCGTCTACGGCCCGCTTACATGGCGTCCCCCCTCGACGTCCTCGCATTGGTCGAGCGCAAGGTGGATGACCTGGTGAAAGAGCTGGAGCGACACCTCCGGG



gi|87031983|gb|CI268212.1|CI268212 CI268212 Oryza sativa (japonica cultivar-group) Shoot and root of germinating seeds Oryza sat

CTGACGGTGGACACGATGGTG
||||||||| ||||.||||
CCCTGCCACCTCTGCTGCCAC

EST sequence (targeted fragment marked with yellow):
GTAAAAGAAGTGTTGAAATCATCTGAGTATATTAATACGACGAGACAATAAAACTTTCAAACAAAAAAAAATGATAAGTACAGAAACCTTCAAGACCTACTCCCAGTTTATCGAGCTGTGTATAAAATTTAAAACTGTAAAACATCGTCCTATATTGCTGGGCTGATGGCATGCAACACAGCGACAGCCCGAAACACCCTCAACTCCACATCGACACATTTTAGAGCTGTCGCTGCCAAACCACCGAGCAAACATTATTATCATTATTCTCATTTATAATCAAACAGGTCGAGTTTGAAGCCTGTGTTGTTCTTGTCATCGATCTACAATGCAGCCCTCTGCTGGCTGAAAGCCACCGGAATTTATGTGACCAGGTTGATGCCCTCGGCGAGGAGGGAGTCGGCGAGCACCTGGTTCGCCGCCTCCGACGGGTGGACGGCGTCCCAGAACACGTACGTCGTCGCGTTCGGGCAGGTGCCGATCGACTTGGGGTTGCACAGAAGCACCGTCGTCTCCACCGTCCCTGTCCCGCAGCATCCCCTCCTCGCCT



gi|88975533|gb|CI021615.1|CI021615 CI021615 Oryza sativa (japonica cultivar-group) green shoot Oryza sativa Japonica Group cDNA

CTGACGGTGGACACGATGGTG
||||||||| ||||.||||
CCCTGCCACCTCTGCTGCCAC

EST sequence (targeted fragment marked with yellow):
GAAATCATCTGAGTATATTAATACGACGAGACAATAAAACTTTCAAACAAAAAAAAATGATAAGTACAGAAACCTTCAAGACCTACTCCCAGTTTATCGAGCTGTGTATAAAATTTAAAACTGTAAAACATCGTCCTATATTGCTGGGCTGATGGCATGCAACACAGCGACAGCCCGAAACACCCTCAACTCCACATCGACACATTTTAGAGCTGTCGCTGCCAAACCACCGAGCAAACATTATTATCATTATTCTCATTTATAATCAAACAGGTCGAGTTTGAAGCCTGTGTTGTTCTTGTCATCGATCTACAATGCAGCCCTCTGCTGGCTGAAAGCCACCGGAATTTATGTGACCAGGTTGATGCCCTCGGCGAGGAGGGAGTCGGCGAGCACCTGGTTCGCCGCCTCCGACGGGTGGACGGCGTCCCAGAACACGTACGTCGTCGCGTTCGGGCAGGTGCCGATCGACTTGGGGTTGCACAGAAACACCGTCGTCTCCACCGTCCCTGTCCCGCAGAATCCCCTCCTCGCCTC



gi|88444627|gb|CI694859.1|CI694859 CI694859 Oryza sativa (japonica cultivar-group) 40 days after pollination pistil Oryza sativa

CTGACGGTGGACACGATGGTG
||||||.|||| |||.||.|
AACTGCCGCCTGAGCTGCCGC

EST sequence (targeted fragment marked with yellow):
GAAGAAAGAAAGAAAAGAAAAAAAAAAGGAAAATCGTGTCTCGTCTCGTCTCGTCTTCGTCTCCCCCGATTCCCGAGCAGCTTCTCGAAACCCTCGCGGCCTCGATTCCGGCGATGGCGGAGCCCAACCCGCAAGTGGAGAGGGAGGTGGAGGTGGAGGAGGTGAGGAGGCCGAAGCTGAGGTACTTGGAGTTCGTGCAGGTGGCGGNAGCGCAGGCGACGATCTGCCTCGCGGGGCTCTACGCGCTTGCCAAGGACCACGCCGGCCCGCTCCGCCCCGGCGTCGACGCCGTCGAGTCCGCCGTCAAGGGCGTTGTCGGCCCCGTCTACGGCCGCTTCCATGGCGTCCCCCTCGACGTCCTCGCCTTCGTCGACCGCAAGGTGGATGANACGGTGCAAGA



gi|88228133|gb|CI227613.1|CI227613 CI227613 Oryza sativa (japonica cultivar-group) mixed callus (Normalized Library) and mixed s

CTGACGGTGGACACGATGGTG
|.|||||||||| || |||.|
GGCTGCCACCTGAGCGACCGC

EST sequence (targeted fragment marked with yellow):
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTTGATGTGTATATTTATTCACTTATTACTTCATTGAATCCAAATTATGTGCAGAAACACACATATTTTAACACAACGAATTGAACAAAACCGATCGATCGATGTACAAACAGAAAACTGGCAAACCCAACGAATCACTCCTTTGCAATTTATATACGTGTCAACACACACATTTTCAATCGATCGTGTATACACAATCTACAAATGGTCCGTAGTCGTCGCCGTCGTAGTGCCATTTTTCTCAGTTGAAGACGTCACACTGCTTCCGGATGTTGCCCTTGCCGCCGGACTCGACCCCGACGCGGCCGAGCTTGACGATGGCGTCGGCGAAGGCCTTGTAGAAGTCCGGCGTGCTGGCCGCCAGCGAGTCCACCGTCGGCCGCGTGCGGTTGTCGGTGTAG



gi|86843442|gb|CI339519.1|CI339519 CI339519 Oryza sativa (japonica cultivar-group) flower Oryza sativa Japonica Group cDNA clone

CTGACGGTGGACACGATGGTG
||||| |||| |||||||||
CACTGCAACCTCTGCTACCAC

EST sequence (targeted fragment marked with yellow):
CGCCAACAAACAAAATATAGCTTTTGTTCTCGATCAACAAACCAAGCATGACATGCCAATATTTACAAACATCAAACTAGCAAGCTCTGGATTAGTTGAGCTTTATTACCAGTACTAAGTATATTACTTAGCAACTATTATTTTGGCCTCTTGACAATCAGCACTGGGCATTTGGAGTTCTGCGCACAGTGATTGCTCACGCTTCCCAGGAACGCCCTCTGGATGAGGCCGTATCCATGGGTGCCCATGACCAGCAGATCGGCGGCCATCTTCTCGGTGGCGTCGCAGATGACGTCGCGCGGGTCCCGCTCTCCACCATCGTCTCCAACGTCACGTGAGGGAAAGCGGCGCAGATGTGGTTGGCCTTGCCCCACCGCCGCGGCCGGAGACGGCGGCGGCGTACTTGTCCATGCTCGCCATCACGTCCGAGGTCATCATGTACCCTG



gi|117231460|gb|CT846864.1|CT846864 CT846864 Oryza sativa (indica cultivar-group) cv. Guang Lu Ai 4 Oryza sativa Indica Group cD

CTGACGGTGGACACGATGGTG
||| |||||||| ||||.||
GACAGCCACCTGCACTACTAC

EST sequence (targeted fragment marked with yellow):
AATCATTCCTCCCCTGACGCCGCGCCGCAACTCGCCGCCACTCCCCGTCGCCGCCGCCGCCGCTTGTCGAAGCTGGTTTGGGGGATTCGGGGATTTGACGGATTAGAGGAATCGCAGTCGCAGATGGAGGCCATGGACGACATGGCGGCTCTGACGGAGGACATCCTCCTCCAGATCTTCTCCCGCGTGGGCAGCATCAAGGACCTCTTCAAGTTCGCCGTGACATGCCGGCGGTGGCTGCGCCGCTTCACCGACCCGGCCTTCCTCCGCGGGCTGTGCCTGGACAGCGGCGAGGGCCACCGCGCGCGCCTCCTCGGCTTCTTCTTCCAGCAGACGAGATTCTATCGCTGCGAAAAGATGATCAAGATGCGGGTGACGCAGCAGAGCTCGGTCTGTCCGCCCACCTTCCTGCCGGCGCCGTGGTCGCCGCTCGGCCTCACGGATCGCACCCTCACCTCCTTCCTCGCCACCGACGACGACACCTTCAACTACGCCGAGCCCCTCGCAGCGCGCTGCGGCATTGTCCTGATGCGGCTTGGTCCCCCGCACCGCGCTGATGATAGCGTGCAGCCCACTCCTCCGCGTCTGCAACCCGATCACCGGGGAATGCCACGTTCTCCGCCTCTGATCTCTCCGGCCTTCATCGCTACTTGACCCGCTACGCCATCATCACGTCCACCGACAGGGACCTAAATGGGGAGCAAGCCGCCTAATCATTATCGTCAGGGCGCTTCCGTTCTCGCAGTTGTCCCTTGGGGCCCAACCAAAAAAAACTGGTACAATTCTTTTACTTCTACTTTTGTGGTTCCCCCAGTTGGAGCGCTCCCCCCTTGGGCGGGGGCGGCCCCCCCTTTTTTCCTGGGTGGGGGGAAAAACCCCCCGCCGTTCACAAGGGGGCCCGGGGCCCCTGGCTTTTTTTTTGGTTCGGTTTTTTTTTCCCCCCCCCCCAAAAAAAACAATCTTGGCCAAAAACTTCCCCCCGGGGGGGGGGGGGGACCCCCCATAAAAAAAATTTTCTTTTTGCCAAAGGGTTCCCCCCTTTTTTGGGGGGTGGGGGGGGGGCCCTCTCCCCCCCTCCCCCTTCTTGTTGGTGAGTGGGGGGGGGAAGAAACCCGGGGAAAAAACATTTTTTTTTGGGGGGGGCCCCTTTTTGTGTGGGGGCGGTGGTTTTTTTTCCCCCCCCCCACCCCCC



gi|218478208|gb|FG961113.1|FG961113 MA_PA64s_08924 Mature embryo cDNA Library of PA64s Oryza sativa Indica Group cDNA 5', mRNA s

CTGACGGTGGACACGATGGTG
||||||.|||| |||.||.|
AACTGCCGCCTGAGCTGCCGC

EST sequence (targeted fragment marked with yellow):
CAGCTTCTCAAACCCTCGCGGCCTCATTCCGGCGATGGCGGAGCCCAACCCGCGGGTGGTGAGGGAGGTGGAGGTGGATGGAGGTGAGGAGGCCGAAGCTGAGGTACTTGGAGTTCGTGCAGGTGGCGGCAGCGCAGGCGACGATCTGCCTCGCGGGGCTCTACGCGCTTGCCAAGGACCACGCCGGCCCGCTCCGCCCCGGAGTCGACGCCGTCGAGTCCGCCGTCAAGGGCGTCGTCGGCCCCGTCTACGGCCGCTTCCATGGCGTCCCCCTCGACGTCCTCGCCTTCGTCGACCGCAAGGTGGATGACACGGTGCAAGAGCTGGACCGACACCTCCCGCCGACGCTGAATGCCGCCTCCGCCAAGGCTTGCGCGGTGGCCCGCGGCGTGCCGGATGTGGCGAGGGAGCTCACCGCGGAGGTGCAGCAGTCGGGCGTTACCGGCGCCGTGCGCGTCGCGTACGCCAAGGTCGAGCCCGTGGCCAAGGGCGTGTACG



gi|86901609|gb|CI310371.1|CI310371 CI310371 Oryza sativa (japonica cultivar-group) NAA treated callus Oryza sativa Japonica Grou

CTGACGGTGGACACGATGGTG
||||||.||||| ||||||.|
GACTGCTACCTGGGCTACCGC

EST sequence (targeted fragment marked with yellow):
TCATATTGATGTGTATGCTACCTGAATCACCAAGGTGGCTATACAGACAGGATAGGAAAGAGGAGGCTGAAGCCATATTAAGGAAGATTTACCCCGCGGCTGAGGTTGAAGAAGAGATCGATTCGATGCGCCGATCAATTGAACATGAGAAACAACTGGAGGGCTCCATCGGCGAGCAGAGTCTGGTTGGCAAGCTGACGAAGGCACTGAGCAGCAAGGTCGTCCGCCGTGGGCTCATGGCCGGCGTCATCGCGCAGGTCGCCCAGCAGTTCGTCGGCATCAACACCGTCATGTACTACAGCCCGACGATCGTCCAGCTGGCCGGCTTCGCGTCGAACAACACGGCCATGGCGCTGTCCCTCATCACCTCGGGCCTCAACGCCATCGGGTCCATCGTCAGCATGTTCTTCGTGGACAGGGCCGGCCGCCGTCGCCTGATGATCAT



gi|88689110|gb|CI732686.1|CI732686 CI732686 Oryza sativa (japonica cultivar-group) 1 nuclei stage anther Oryza sativa Japonica G

CTGACGGTGGACACGATGGTG
||||||.|||| |||.||.|
AACTGCCGCCTGAGCTGCCGC

EST sequence (targeted fragment marked with yellow):
GCTTGAAGGGAAAGTAAGAAAGAAAGAAAAGAAAAAAAAAAGGAAAATCGTGTCTCGTCTCGTCTCGTCTTCGTCTCCCCCGATTCCCGAGCAGCTTCTCGAAACCCTCGCGGCCTCGATTCCGGCGATGGCGGAGCCCAACCCGCAAGTGGAGAGGGAGGTGGAGGTGGAGGAGGTGAGGAGGCCGAAGCTGAGGTACTTGGAGTTCGTGCAGGTGGCGGCAGCGCAGGCGACGATCTGCCTCGCGGGGCTCTACGCGCTTGCCAAGGACCACGCCGGCCCGCTCCGCCCCGGCGTCGACGCCGTCGAGTCCGCCGTCAAGGGCGTCGTCGGCCCCGTCTANGGCC



gi|117240609|gb|CT862371.1|CT862371 CT862371 Oryza sativa (indica cultivar-group) cv. Guang Lu Ai 4 Oryza sativa Indica Group cD

CTGACGGTGGACACGATGGTG
|||||||||||| |.|| ||.
GACTGCCACCTGAGTTAGCAT

EST sequence (targeted fragment marked with yellow):
AACAACAAAAATTATCATAAATATAACTCTTTTTTTAACAATGATAAAAAAACTTAATTGAAATCTTTTATATGACTAATTAATGTACCAATAAAAATGTCATTCCTTTTCGGTCGAAGTCTCAGTAAACCGAATAACCCAAAACCGCAATCAGAGCAGAAACCAAAATGGATCGATTTAAAAGACGTCGACATTGGTTCACATCAAACTGAGAATCAATTCAAAGAGTTGATTATTCTACCCTATTTTAGAAGCACTGTTAGTAGCATTTGTATTCTGGACGATGATAGAAGGATAGTAACCGGCGACGATTCCGGAAATCTAATTGTCTGGGACATAGAAAACGGCATGAAATTAGCCGAGCTGAAATTCCATTCGTCATCGATAAACGGCATACTAAGCTTCCCACAAGCATATTCATCGAAATTGAAGAAATATCAAGATGTAATTATCGCATCAAGCAACGACAAATGCGTGACTGTATGGAACATAGACACGTATAAACGGGTAAACATACTACGATTGAGTCCACCGTCAGCAACGTCATCAATAAGTGGCCTAAACAACAAGCTGCTCTTAAAATGCGCCGATTTGGACGAGGAAGGCGGAGAGAGCTACTTTTTATTGGGAGGACTCGATTTAAAACTCCTTGACCTTGACCTAAACCTCGTAGATGAGCTCGCGCGAAAGACTAAAGAGAATTCAGCGCGACTCGCAACCATGATAAAAAGCGACAAGTTTGTGGTCGCTACCAACTCGGATATCGAGATTTACGCTCTCGTTTGCTTAGGATCTCGATCGAACGACGAAACAAGCAACAAACGAACGACTAGTTACACAGGCGTTCGAATAAAGAGCTAAAAAAGTACATGAATGCACATGAGGATAGTATTCTATGTTTAGCTTAAGTCACCGACAGCATGTTTGCGTCTGGGTCGTCAAACGGACATTTCATTCTTGTGCAATCGGATACGCTAATTAAGATCATGGATTTGAGGGCCTTGGGAGGAAGTTATTATTCAAAATGACCCGGGAAGACCTCTTCGGATTGACTTACCTAACTTTTTTTCCATGGCTTTTTTAAAAAAATATTTTTGATTTTTTGGGGGGATCCCAAATTGCCACTTTTTAATTTTTTGGGGAAAAAAATTTTTTTTTTTAAAAGTACAAAAAAGGTCTTGGGGGGAATAAAAAAAAAACCCTTTTTTTTTTTTTTTTAAAAAAACAAATTTTTTTTTTCTCCTTCTTCTTTTAAAACACCGCCCCCTTTAAAAAAATTTTGGGGGGTTTTTTGGTAGAGAAGAAGTGTGTTGTAAATAAATATAAAAAAAAAAAAAAAAAAA



gi|163926556|gb|EG712420.1|EG712420 Os5MPREST0050 Rice young panicles Oryza sativa Japonica Group cDNA clone 5MPR-A1E06S, mRNA s

CTGACGGTGGACACGATGGTG
||||||.|||| |||.||.|
AACTGCCGCCTGAGCTGCCGC

EST sequence (targeted fragment marked with yellow):
ACGGCCGGGGGCTTGAAGGGAAAGTAAGAAAGAAAGAAAAGAAAAAAAAAAGGAAAATCGTGGTCTCGTCTCGTCTCGTCTTCGTCTCCCCCGATTCCCGAGCAGCTTCTCGAAACCCTCGCGGCCTCGATTCCGGCGATGGCGGAGCCCAACCCGCAAGTGGAGAGGGAGGTGGAGGTGGAGGAGGTGAGGAGGCCGAAGCTGAGGTACTTGGAGTTCGTGCAGGTGGCGGCAGCGCAGGCGACGATCTGCCTCGCGGGGCTCTACGCGCTTGCCAAGGACCACGCCGGCCCGCTCCGCCCCGGCGTCGACGCCGTCGAGTCCGCCGTCAAGGGCGTCGTCGGCCCCGTCTACGGCC



gi|88744722|gb|CI768082.1|CI768082 CI768082 Oryza sativa (japonica cultivar-group) root of seedling gamma-irradiated(45Gy), immi

CTGACGGTGGACACGATGGTG
|.|||||.||| ||||.||.|
GGCTGCCGCCTCTGCTGCCGC

EST sequence (targeted fragment marked with yellow):
GGATCCCTTCTCCTCCTCCTTCCGCTATAAGACCAGCTCGGGGATCGCCTCCCGGTGAGCCATGTCGCCGGACGGTCGCCGCACACGCCACAGTCGTCGTTGCACACACGCGCCGCCGTTGTTGTCGTCCTCTTCTCCTCCGACGTCGTCGTCGCCGTCGCCGTCGTGAACATGGCGGCGGAGGCGGAGCAGCAGCACCAGCTGCTGTCGACGGCCGTGCACGACACGATGCCGGGGAAGTACGTCCGCCCGGAGTCGCAGCGCCCGCGCCTCGACCTCGTCGTCTCCGACGCCCGCATCCCCGTCGTCGACCTCGCCTCCCCCGACCGCGCCGCCGTCGTCTCCGCCGTCGGCGACGCCTGCCGCACCCACGGCTTCTT



gi|88842928|gb|CI371828.1|CI371828 CI371828 Oryza sativa (japonica cultivar-group) callus Oryza sativa Japonica Group cDNA clone

CTGACGGTGGACACGATGGTG
|||||||||| |||||||||
CACTGCCACCTCTGCTACCAC

EST sequence (targeted fragment marked with yellow):
ATAAAAAGTCAAATAGCCTGCAAATTTCAACCATTACAAGGTGCCAACAGATCCGAAGATCCGCATCGGTCGCTGAACATCGAACGCTGCCATGCCACCAAACAAAATATAGCTTTTGTTCTCGATCAAAAAACCAAGCCATGACATGCCAATATTTACAAACATCAAACTACCAAGCTCTGCATTAGTTGAGCTTTATTACCAGTACTAAGTATATTACTTAGCAACTATTATTTTGGCCTCTTGAAAATCAGCACTGGGCATTTGCAGTTCTGCGCAGAGTGATTGCTCACGCTTCCCAGGAACGCCCTCTGGATGAGGCCGTATCCATGGGTGCCCATGACCAGCAGATCGGCGGCCATCTTCTCGGTGGCGTCGCAGATGACGTCGCGCGGGTCCCCGCTCTCCACCATCGTCTCCACCGTCACGTGAGGGAAAGCGGCGCAGA



gi|40493392|gb|BX900742.1|BX900742 BX900742 Oryza sativa library (Han B) Oryza sativa cDNA clone y797h04p5, mRNA sequence

CTGACGGTGGACACGATGGTG
|||||||..|| |||||.||
GACTGCCGTCTAAGCTACTAC

EST sequence (targeted fragment marked with yellow):
CGCCATTGTGTTGTACCGGGAATTCGGCATTATGGCCGGGGGCAGAGTCAGTGTAACAAAGACACTGAAGCTACAGCCTACAGAGAGAGAGTATCTGGATACTTAATTGTGTGCTTAGCTTGCGGTTAAGCAATGGCTTATTCCAGGCAAATCTTCGTCTGCTCTGCCATGGCTGCGTTGCTCTTCTCTGCTGTTGTCTCGGCGCAGCTCTCCACTGATTTCTACGACGAGACATGCCCCGACGCGCTCGACATCATCGAATCTGCCGTCAGAGTCGCCGTTTCCAAGGAGTCCCGCATGGGAGCTTCTTTGCTGCGCCTCCATTTCCACGACTGCTTTGTCAATGGGTGTGACGGGTCAGTGCTGCTCGACGACACGGCGGCCATCACCGGCGAGAAGAACGCGAAGCCGAACAAGAACTCCCTCCGCGGCTTCGAGGTCGTCGACGACATCAAGTCGCAGCTCGAGGATGCCTGCAAGCCAGGTGCACCAACTTTCGCGGCCGCCTCTACAACGAGACCAACCTCGACGCCACCCTCGCCACCTCGCTGAAGCCGAGTTGGCCCAAACCCACCGGCGGCGACGAAAACACGGAGCCGCTCGACCCGGACACCTCCTACGTGTTCGACAACTTCTACTCACAGGAACCTCCTGAGGAACAACGGGCTTCTGGGACTTGGGACCAGCAGCTTGTTCAACAGGGGGGGTCCCGCCAACGCCCGGAACCC



gi|58678581|gb|CK067268.1|CK067268 70066rsicem_20607.y1 Oryza sativa cv. PA64s panicle ferile cDNA library Oryza sativa Indica G

CTGACGGTGGACACGATGGTG
||||||.|||| |||.||.|
AACTGCCGCCTGAGCTGCCGC

EST sequence (targeted fragment marked with yellow):
GCACGAGGGGGCTCTACGCGCTTGCCAAGGACCACGCCGGCCCGCTCCGCCCCGGCGTCGACGCCGTCGAGTCCGCCGTCAAGGTGCGTCGTCGTGCCCCGTCTACGGCCGCTTCCATGGCGTCCCCCTCGACGTCCTCGCCTTCGTCGACCGCAAGGTGGATGACACGGTGCAAGAGCTGGACCGACACCTCCCGCCGACGCTGAAGGCCGCCTCCGCCAAGGCTTGCGCGGTGGCCCGCGGCGTGCCGGACGTGGCGAGGGAGCTCACCGCGGAGGTGCAGCAGTCGGGCGTCACCGGCGCCGCGCGCGTCGCGTACGCCAAGGTCGAGCCCGTGGCCAAGGGCGTGTACGGCAGGATCCAGCCGGCGGCCAAGGACCTCTACGTGCGCTACGAGCCGGCGGCGGAGCACCTCGCCGTCTCCACCTGGCGCTCGCTCAACAACCTGCCGCTGTTCCCGCAGGTGGCGCAGATCGCCGTGCCCACCGACGCCTACTGGGCCGAGAAGTACAACAAGGTGATCGCCGCCGCGGACGACAAGGGTTACACCGGAG



gi|87024159|gb|CI291812.1|CI291812 CI291812 Oryza sativa (japonica cultivar-group) etiolated shoot Oryza sativa Japonica Group c

CTGACGGTGGACACGATGGTG
| ||||||||| ||||||||
GCCTGCCACCTCGGCTACCAC

EST sequence (targeted fragment marked with yellow):
ATGCATGCCAAGAGGTTTAACAAGATGGCTCGGCCGTCGTCGTCGTGGTGGATGGCGCTGCTCGTCGTCGCCGCCGTGGCGCAGCTCGGCGCGTCCGACCTGAGGACGGACTACTACAACAGCACGTGCCCCAACGTCGAGAGCATCGTGCTCGGCGTGGTGAAGGACAAGATGCAGGCCACCATCCGCACCATCGGCTCCACCGTCCGCCTCTTCTTCCACG



gi|88363402|gb|CI617963.1|CI617963 CI617963 Oryza sativa (japonica cultivar-group) callus Oryza sativa Japonica Group cDNA clone

CTGACGGTGGACACGATGGTG
|.||||.|||| ||||.|.||
GGCTGCTACCTCTGCTGCTAC

EST sequence (targeted fragment marked with yellow):
GCTTTGGTTGTTGGTTGGGTAGAGTCGTCGCCGGAGTTCATGGGGGCTGAGGCGAAGGCGCCGCTGCTGGAGGGGAGGAGGGGCGCGACGCCGGCGCAGACGCTGGGCAACATCGTCGTCTCCATCGTCGGCACCGGCGTGCTCGGCCTCCCCTAAGCCTTCCGCACCTCCGGCTGGCTCGCCGGAGCTCTCGGCGTCGCCGGGGCCGGCGCCGCCACCTTCTACTGGATGCTCCTCCTTCTGGATTGCAGAGACAAGCTACGGGAGCAAGAAGAGGTGGATCACGAGGGCAACTACACCTATGGCGACTTAGGCGAGAAATGCTTCGGGGCCATTGGGAGATACTTCAGCGAGGTAACCATCATCCTCTCCCAGACGGGCGGCTCCGCTAGCCTAACTCGTCTTATCGGCCACAAATCTGCTCGTCTT



gi|88201429|gb|CI201784.1|CI201784 CI201784 Oryza sativa (japonica cultivar-group) Panicles mixture of one, two, three weeks aft

CTGACGGTGGACACGATGGTG
|.|||||||||| || |||.|
GGCTGCCACCTGAGCGACCGC

EST sequence (targeted fragment marked with yellow):
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCCATCCAAGCAACTGTTCTAAATTAATCCTGTCATCACACATCAAAATCTGTCTTTGGTGGATAGTGTAGTATTTATTCACTTATTACTTCATTGAATCCAAATTATGTGCAGAAACACACATATTTAAACACAACGAATTGAACAAGACCGATCGATCGATGTACAAACAGAAAACTGGCAAACCCAACGAATCACTCCTTTGCAATTTATATACGTGTCAACACACACATTTTCAATCGATCGTGTATACACAATCTACAAATGGTCCGTAGTCGTCGCCGTCGTAGTGCCATTTTTCTCAGTTGAAGACGTCACACTGCTTCCGGATGTTGCCCTTGCCGCCGGATTTGACCCCGACGCGGCCGAGCTTGACGATGGCGTCGGCAAAGGCCTTGTAAAAGTCCGGCGTGCTGGCCGCCAGCGAGTCCACCGTCGGCCGCGTGCGGTTGTCGGTGTAAAG



gi|87006604|gb|CI294987.1|CI294987 CI294987 Oryza sativa (japonica cultivar-group) etiolated shoot Oryza sativa Japonica Group c

CTGACGGTGGACACGATGGTG
|.||||||||| | | |||||
GGCTGCCACCTCTCCCACCAC

EST sequence (targeted fragment marked with yellow):
CTCTCTGTGTGGGCTGGCCCCCGGCCGGCGGGTGGCCGGGTGGGGAGGAGGTCGGCAGGGCGAGGCGAGAGAGGCGCCCGGCGACGGGCGATGTGGAAAGAGGTGCTCGCGTCGATGCGGTCGTCGTCGCCGCCGGCAAGGTGGGGGGAGGTGGAGGCAGGGAACGGGAAGAGTGGAGGGAGTGGGAAGGGCGGCGACCGGCGGCGAGAGTGCGTGGAGAGGGAGGAGACAAGGAAGCCAGCGGCGAGCGCGCAGGTAGATCCTCTTCATCGCCACTTTGGGCCGCCTCGTCGCCCGCAGGAGGTGGCCAAGTCGATGTCGGCAGTTCTACGTCGCCTCCATGTACTGGTTCATCACCACCCTCTCCACCGTCGGCTACGGCGACATGCACGCCGAGAACACCGG



gi|88204547|gb|CI204396.1|CI204396 CI204396 Oryza sativa (japonica cultivar-group) Panicles mixture of one, two, three weeks aft

CTGACGGTGGACACGATGGTG
|||||||||| |||||||||
CACTGCCACCTCTGCTACCAC

EST sequence (targeted fragment marked with yellow):
TTTTTTTTTTTTTTCGATCAACAAACCAAGCATGACATGCCAATATTTACAAACATCAAACTAGCAAGCTCTGCATTAGTTGAGCTTTATTACCAGTACTAAGTATATTACTTAGCAACTATTATTTTGGCCTCTTGACAATCAGCACTGGGCATTTGCAGTTCTGCGCACAGTGATTGCTCACGCTTCCCAGGAACGCCCTCTGGATGAGGCCGTATCCATGGGTGCCCATGACCAGCAGATCGGCGGCCATCTTCTCGGTGGCGTCGCAGATGACGTCGCGCGGGTCCCCGCTCTCCACCATCGTCTCCACCGTCACGTGAGGGAAAGCGGCGCACATGTGCTTGGCCTTGCCCACCGCCGCGGCGGAGACGGCGGCGGCGTACTTGTCCATGCTCGCCATCACGTCCGAGGTCCTCATGTACCCTGAGCTGTCCATGGCGGCGTAAACCGGGCGGGGGCGGCGGGCGTGGAGCAGCACGAGCGTGTCGCCGCCGGAG



gi|88271355|gb|CI387408.1|CI387408 CI387408 Oryza sativa (japonica cultivar-group) callus Oryza sativa Japonica Group cDNA clone

CTGACGGTGGACACGATGGTG
|||||||||| |||||||||
CACTGCCACCTCTGCTACCAC

EST sequence (targeted fragment marked with yellow):
CGTGAATTAAAATTACTCAGATGCATAGAAAAAGTCAAATAGCCTGCAAATTTCAACCATTACAAGGTGCCAACAGATCCGCAGATCCGCATCGGTCGCTGAACATCGAACGCTGCCATGCCACCAAACAACATATAGCTTTTGTTCTCGATCAACAAACCAAGCATGACATGCCAATATTTACAAACATCAAACTAGCAAGCTCTGCATTAGTTGAGCTTTATTACCAGTACTAAGTATATTACTTAGCAACTATTATTTTGGCCTCTTGACAATCAGCACTGGGCATTTGCAGTTCTGCGCACAGTGATTGCTCACGCTTCCCAGGAACGCCCTCTGGATGAGGCCGTATCCATGGGTGCCCATGACCAGCAGATCGGCGGCCATCTTCTCGGTGGCGTCGCAGATGACGTCGCGCGGGTCCCCGCTCTCCACCATCGTCTCCACCGTCACGTGAGG



gi|88253067|gb|CI351693.1|CI351693 CI351693 Oryza sativa (japonica cultivar-group) flower Oryza sativa Japonica Group cDNA clone

CTGACGGTGGACACGATGGTG
||||| |||| |||||||||
AACTGCAACCTCTGCTACCAC

EST sequence (targeted fragment marked with yellow):
AGAAAAAGTCAAATAGCCTGCAAATTTCAACCATTACAAGGTGCCAACAGATCCGAAGATCCGCATCGGTCGCTGAACATCGAACGCTGCCATGCCACCAAACAACATATAGCTTTTGTTCTCGATCAACAAACCAAGCATGACATGCCAATATTTACAAACATCAAACTAGCAAGCTCTGCATTAGTTGAGCTTTATTACCAGTACTAAGTATATTACTTAGCAACTATTATTTTGGCCTCTTGACAATCAGCACTGGGCATTTGCAGTTCTGCGCACAGTGATTGCTCACGCTTCCCAGGAACGCCCTCTGGATGAGGCCGTATCCATGGGTGCCCATGACCAGCAGATCGGCGGCCATCTTCTCGGTGGCGTCGCAGATGACGTCGCGCGGGTCCCGCTCTCCACCATCGTCTCCAACGTCAAGTGAGGGAAAGGGGCGCAGATGTGCTTGGCC



gi|86601282|gb|CI251656.1|CI251656 CI251656 Oryza sativa (japonica cultivar-group) Panicles mixture of one, two, three weeks aft

CTGACGGTGGACACGATGGTG
|||||||||| |||||||||
CACTGCCACCTCTGCTACCAC

EST sequence (targeted fragment marked with yellow):
AACGTCAAATAGCCTGCAAATTTCAACCATTACAAGGTGCCAACAGATCCGCAGATCCGCATCGGTCGCTGAACATCGAACGCTGCCATGCCACCAAACAACATATAGCTTTTGTTCTCGATCAACAAACCAAGCATGACATGCCAATATTTACAAACATCAAACTAGCAAGCTCTGCATTAGTTGAGCTTTATTACCAGTACTAAGTATATTACTTAGCAACTATTATTTTGGCCTCTTGACAATCAGCACTGGGCATTTGCAGTTCTGCGCACAGTGATTGCTCACGCTTCCCAGGAACGCCCTCTGGATGAGGCCGTATCCATGGGTGCCCATGACCAGCAGATCGGCGGCCATCTTCTCGGTGGCGTCGCAGATGACGTCGCCCGGGTCCCCGCTCTCCACCATCGTCTCCACCGTCACGTGAGGGAAAGCGGCGCAGATGTGCTTGGCCTTGCCCACCGGCGCGGCGGAGACGGCGGCGGCGTACTTGTCCATGCTCGCCATCACGTCCGAGGTCATCATGTACCCTGAGCTGTCCATGGCGGCG



gi|29644129|gb|CB649136.1|CB649136 OSJNEb12O15.f OSJNEb Oryza sativa Japonica Group cDNA clone OSJNEb12O15 5', mRNA sequence

CTGACGGTGGACACGATGGTG
.||||||||||||| .||.|
CGCTGCCACCTGTGCCGCCGC

EST sequence (targeted fragment marked with yellow):
CTCGCGCCGCCGCCCCCTTAAACTCTCCTCCCTCTCCCTCTCCCTCTCCCACCGCCACCGCTCCGCGCCGCCGTCCCCACCTCCGCCTCCCGCCGCCGCTGCGTCATCTCCGGCCTCCGTCGCACGCCGACGTCTCCGCCTCCGCCTCTCGCCGTCGCTTGCCCCTCGCGCCACCGCGTCCGCCTCCCCTCGCGCCGCCGTGTCCACCGTCGCCGCCGCGGCAGCGTCCAGCTCGGCCGCGGCGGCTACGTCCACCGACGTCGCCGCCGCCGCGTCCACCTCCTCCTCCCTCCTCGCTTGCACTCGCTGCTCTCTCTCTCTCTCTCTCCCATCTCGTCCTCGCTTCCTGCTGGAGCTCGGAACTCAAGCCATTTTCGTGGCCGCGGGGGAACCCTAACCCTAGCCGCGCAAGCCGGGCGAGCGGGAGAGCGAGCGAGCGCCGCGGGGG



gi|86900498|gb|CI298333.1|CI298333 CI298333 Oryza sativa (japonica cultivar-group) etiolated shoot Oryza sativa Japonica Group c

CTGACGGTGGACACGATGGTG
||||||.|||| |||.||.|
AACTGCCGCCTGAGCTGCCGC

EST sequence (targeted fragment marked with yellow):
GCTTGAAGGGAAAGTAAGAAAGAAAGAAAAGAAAAAAAAAAGGAAAATCGTGTCTCGTCTCGTCTCGTCTTCGTCTCCCCCGATTCCCGAGCAGCTTCTCGAAACCCTCGCGGCCTCGATTCCGGCGATGGCGGAGCCCAACCCGCAAGTGGAGAGGGAGGTGGAGGTGGAGGAGGTGAGGAGGCCGAAGCTGAGGTACTTGGAGTTCGTGCAGGTGGCGGCAGCGCAGGCGACGATCTGCCTCGCGGGGCTCTACGCGCTTGCCAAGGACCACGCCGGCCCGCTCCGCCCCGGCGTCGACGCCGTCGAGTCCGCCGTCAAGGGCGTCGT