| mature miRNA: CTGCATTTGCACCTGCATCTT species: Populus x canadensis database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|56828086|gb|CX180662.1|CX180662 C10_45-20_06.ab1 leaf inoculated with Marssonia pathogen of Populus euramericana Populus x ca CTGCATTTGCACCTGCATCTT EST sequence (targeted fragment marked with yellow): GGCACGAGGGCCAGTCTCATTGTATATAATACTACTAGTTATAGAGAGTGAGTGACAGCTAGTAGCTAGCAGTTGTTTGATATAATATGATAAACAGGCTGCAGGTCATACAGGCATCTCATGCATGCCAATATGTTGCCTTTATCTGCATTTGCACCTGCATCTTTTGCGTTTGTTTTGTTTTTGACTCCACAAACAAAATCAAGTTCTGTCGATACAGTATGTGGGACAATTAGATATAGAGTGTTAGATATGGAAACTAATAAGCTTAGTTGAGGTGCAGGTGCAAGTGCAGGTGAATGCCATTTTGGTAATGTTTTCACTCACATATATATACGGCAGTGCTGCCTCTTTTCTTTTCATCTGTCTGTGGTTAATTTGCAGTTTCATGGTGGCAGAAATATTGTACTGGTAATCATCAAGGAGAAAGGGCAAGAAATTCTTGTGCTTATTAATTAACTATGAGAGCAAATTAATGTGTTTTCAACAACGACAGGCCATGTATAAAATTCTTTATGCAGGTGCTTGGTGTTTATAGAGGTGATGATGAATTGAAGTGATTGTGCAGCCACAATTCAATGGATGTGGAAGAATACTTCAAGGGTTTTCCAGTAATCTTTGAATTAAGTACTTGGAGGACAGATCATCCATGATCAATA | |||||||||