| mature miRNA: CTGCTCTCTCTGCTCCATCTC species: Citrus sinensis database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|188471515|gb|EY669720.1|EY669720 CS00-C1-102-051-F04-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) CTGCTCTCTCTGCTCCATCTC EST sequence (targeted fragment marked with yellow): CAAGGCCAACGAGCCGACCCTTTGCGCCGGCGAAGATGGGAAGCATTGCTTGGATTGCTTTATGAGTAATTTGTTCGGGAAGTTTCGTCTGGCTGTTGCTTCCAACGCCTTGATCACTCCAGCTGACAACGTTCTCGTCGCCTTCTCCGGTGGCCCAAGTTCCCGGGTGGCTCTTCAGTTTGTGCATGAGTTGCAGCAGAGAGCGCAGAAGAATTTTGATGCTAGTAAAGATAGATCTTTACCTGTATTTGGTGTCGGAGTTGTGTTCGTCGATGAAACCGCTTATTATCCAGTTCCTTCTTCGGAAATTGACAATGCTATCCAAGAGATTAAATTGATTGTATCAAATCTATCCCCGCCAACAAAAGAGTTACATGTCATTCCAATAGAAAGTATCTTCTGTTCAAATCCGTGTGATGGAAGGGAGAGATTCAAAAAGTTAGTGGATTCTGTTAGTGATGCCACTGGAAAAGAAGATCTTCTGTTGCAGCTAAGGATGTTGTCTTTGCAAAAGTTTGCTTCAGAAAATGGTTACAATAGACTGTTACTAGGGCTATGCACATCCAGGATTGCTTGCCATGTTATAACAGCAACTGTGAAGGGTCGAGGCTATTCTTTACCCGCAGATATACAATATGCTGATGCTAGGTGGGAAATCCTTGTAAGGCTTCCACTTTCTGACTGTCTTGTTCAAAAGGTCAACTTGTTTTGCCAACTTTGACTGTCTAAAAAATGGGGAGGTACTTAATCAAACTCCCTCCGGAATTAATGGGTTGGGGATTATCATTTTGGAAAAAAATCCCAGAAAAAAAAATCCTTTTCCGGGAAAGACAAATTTATGGG | |||||||||
gi|188391949|gb|EY700906.1|EY700906 CS00-C3-700-100-E06-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cD CTGCTCTCTCTGCTCCATCTC EST sequence (targeted fragment marked with yellow): CTGCAAACCGCCAGCGAAACCCACCCGGCTTATCAACGGCTGGCGGCGGTGGACGAGTACATCCGAGCGCATTCAATCGACGTGTCACGTTGGGTGAGTTGACGCGGATTGCCGGGATTTCAGTGGCGCAGCTGGAGCGCTACTGCAAGCGCGTATTCCACCTCACGCCGCGCCAGATGATCCAGAAGGTACGCCTGGAGCATGCGCATCGCTTGCTGCATACCGAGCTGCCGATCACTGACGTGGCGTTGCAGTGTGGGTACACCGACCACAGTGCGTTTACCCGGCAATTCAAGGCGTTGACCGGGTTTACGCCGCGCCAGTATCGTCAGGCGACCGGTGGGCAGTGATGTCTAATTGGATCTACGTGAATGTCATGAGCAGCGGTGGCGCCAACAAGGAGGGTGCCAACGCTCTTCGCAGTTGCGCAAATCTGGTCAGTTTTATCCCTGCCGTTGGCGCGATTTATCAAGTCATCCAGTCCGTGCCCGTGAGTGGCTGCGTGGTGGATATCCCCGACAAAACTACCGGGCACTCTCCTGATTCGTTCAGAAGAGAAGCGGGCGTGCCCGTCTTCAACCATAGCCGTGGTTAAACTGTCGGGAGTCCAGCGAGATGGAATCGGCGATAGAGTTATTTTCGGAGGGGTACGGAGCAGGGAGGGCAGGCCGTTCCTCGCGGGGGGGGGGGGAGTAAGGGGGGGGGCGGGGGGGGGGAGAACCCGGTCGAAGCCGTTTGGGGTCGTGGGGGCCCCGGAGCCCGCGCGCCACGGAGGGTGATCGTGCGGCCCGGGGGCCGGACGCGCGCGCGGGGTGTGGGGGGGTGGGGCCGTGAGGGGAGTGGCCGGGGTGTGCGGGGGTGCTGGCACGCGGGCGCGGGGGTGGGGGGAGGGGGCCGGTAAACG | |||||||||
gi|55936197|gb|CV886890.1|CV886890 UCRCS04_2_025H01_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cD CTGCTCTCTCTGCTCCATCTC EST sequence (targeted fragment marked with yellow): GATATCAATTAATAGAAGCATTTAATTTAACAAAAACTGTTAATATCCAAAAAAAAAAAAAAAACTTAGGAAAGAACAGGAGCATAATCTCAACAGGAAAAACGAGATGGACAGAGAGGGCAATCAATCTCCGCCAGCCTTCTGGTAAACATAGGTGAGACCGCACTTACCACAATAATGCCTGTCAAAGTGACTGGCCTTAAAAGTGCCAGCACCACACTCAGCATTAGGGCACTCCTTCCTCAGCCTCTGCACTTTCCCAGAATCAT | |||||||||
gi|188359223|gb|EY734788.1|EY734788 CS00-C3-704-087-F10-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cD CTGCTCTCTCTGCTCCATCTC EST sequence (targeted fragment marked with yellow): GAAATACAATAATGACGCGGGAGGGGAAAGAAGGAAGAGGAGAAAGTAGAGTAATAATGGAGAGGGGAAGGNTCACAAAAAGAATNAAAGAAGAGGAGAAGGGAGGGGGGAGGAGGNGGNGGNGGGTAACAAGGGAAGAAGAAGGGGGGGGGGGAACANGGGTTNGTCCCCCAAAAAAAGAGGGGGGGGAAAGGGGAGAAGNNNAAGAGAGAGAAGGAGGGGAGGGGAGGGGGGGGGAAACAAGGGGGCGGCCACAAAAAAAGAGGGGAGGGGGAGGGAGGAGAGCAGAAAGAGAAAGAAAGGAAAAGAGAGGGAAGAGGAGGAGGGAGGGGAGGAGGGAGGAGAGGGAGGGAAGGGGGGGAGGGGGGAGGGGGGGGGGAAAAAAGAGAAAAAAAAAAAACGGGGGGGGGGGGGGAAAAAAAAAACAAAAAACAAAAGAGAACNAAGAAGAGGAGAGGAGGCGAGGGAGAGGAGAAGAAGAGAAGAGAGAAGAGGGAGAGAGGAGAGAGAGGGGGGAGGAAGGAGGAAGAGAAGAAGAGAGGAGAAGAAGAAGAGAGGAAGAAGGAGAGAGGGAGAAGAAGAACAGAGAGAGAGGAGAGGAAGGAGAGAAGGGAAAGAGAAGAGGGAAAGGAGGGGGAGGGGGGGAGGGGGGGGGGAAGGAGAGAGATAGAAGAAACAAAAGAGGGGCAGGGAAGAAGGAGAGGGGGAAGAAGAAGGGAAGAAGGAGGGTGAGGGGGGGGGGAGAACAGAGGAGGAGGAGGAGGGAGAGGCGAGCGAGGGGAGGGAGGGAAAGGGAGAGGGAGTAGAGAGAGCGGGAGGGGGGGAGAGGAGAGGGAAAGAGAATGGGGAGGGGAGAGAAGGGAAGGAGAGGGAAAAGACACAAAACAGAGGGAAGCAGGGAGAGGTAGGAAGGGGAAAGAAAGAAGAGGGAAGGGAGAGAGAGGAGGGAGGGGGAGGGGGAGCGGGAGGAGGACGAAGACGGACGGGGGGCGAGGGAGAGGAGCCAAACAAGAGAAGCAGAAGGGGAAGGAGAGAGGGGGCGGAGAAGAGAAGAGAAAGGAACGAGCGAGGGGGGAAGGAGGAAGCAGGAGACGGAGAGGAAGGAGGGACGAGGCGTGGGGGGAGAGGAGGGGAGAGGAGAAGGAGCGGGGCGGAGGGAGGGACAAAGGCGGAGAGGCCGGAGANGGACGAAGAGAGAAGAGAAGAGAGGAGAGGGGAGAGAGAAGAGAAAGTGGCAGAGAGGAGAGGATAGGAGGAGAGAGGAGGGGAGGGGAGCCAAGAATGAAGAACAAGAGTGAAAGAGAGCGAGGGTGGGGGNAGGAAGGAGAGAGGAGACGAGCGAAAGAGGAGGAGCAGACGAGACAGAGACTAAGAGGCNAGAGGGAAGAGAGATGGGGGNCGAAAAAGCAAAGGATAGGAGACCAGGAGAGAACGAGATGAGGAAAGAGAGGACAAGAGGACGAGAAGAAGGNAGAGAAAGGAAAGAGAGAGAGGAAGAGGAAGAGAGACAGAGGAGAGGGAGAGAGAAAAAAAAGAAGGGGAAGAGAGANGGAAGGA | |||||||||
gi|188327713|gb|EY668675.1|EY668675 CS00-C1-102-058-H01-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) CTGCTCTCTCTGCTCCATCTC EST sequence (targeted fragment marked with yellow): GGACGCCTGCGGACCGGTCCGGAATCCCGTTCCGACAGAGGGCTGGAGATGATCACCAATGGCGNGGACGAGGAAATGCTGGCGGTGAGCACGGGCGTGATGATCGACGGGCAGGAACGGCCGCTGGACGCGGCCATGCGCAAGCGCCTGCTGCGCAGCGCCGAGGACTACAACCGCGATGGCTTCCGGGTGCTGGAGGACCGCTCGGGGGGACCCGAGCGAACAGGACGGTACAAGAGGGGGACGGGAGGGGGAGGAGGCGGGGGAGGGGGGGGGGGAGAGAACCGGACGCGGGAAGGGCGGGGAGGGAGGGAGGAGAGGGAGAGGGCGAAAGAGGGGAGGAAGGAGGAAGGAGGGGAGAAGGCAGGACAACAGCACCAACAAAAAAAGAACAGACCAGAGAGGAGAGAGCCGCGCAGGCCCCGGGGCGCGGGGGCGGCGGCGGAACCCAGACCACCCGCGCCACACAGGACAGGGACGAGGAGGACGAGAAGAGAGGGAGAGGGGGGCGGCGACGCGCAGGCGCGAGAGCGGAAGGCGAGGGGAGCGGAGGCGGGCAGGAGCGAAAGACAGGGAGAGGGGGGGAGAGAGAGAGCCGCGCACCGCCGCACGGCCGCCACGCGGGCGAGAGGCGGAGCGGGCGGGCCCGCGGCGGCGGGAGCCGGCGGGGGGCCGCACGAACGGGGCGAGACGGGAGAGACCGCAGGGCGCGGCGCGCGGCACACAGGCAAACGCGAGCAGCGCGCGCGGGGGCGGACTGCAACGGGGAGAGACGCCGCGAGGGCGAAGGAGGGGAGGGGGCGGGAAGACGCGACGCGAGGGACTCAACGCGCAGACAAAAGGCAGCAAAAAGAGCGCGGCAGCAGACGAGGCAGCGGCGAGAAGGGGAGGCCCGACGACGCAGAGCCGGGCCGCGGGGAGGGCGGGAGAGAGAAGAGGCAGGCGCGACGAAGCGCGGGGGCNCGCGGCGGGAGCGCGGCCCGCGCCGGGCCACGGAACGGGAGGCGCAGAGCCCGGGGCCCCCGCGCGCCGCGGGAGGGACGGGCCGGCGACGCGAGACGACCCGCGCAGAGCCGAAGCCGAGGCCGGAAGGGAGAGGGATGAGGGAGAAGCGGAGGAGGAGCGAGGCGGGGCTCGGCGAGGGAGCAGAGAGAGAAGAGGGGAAAGACAGAGAGCA | |||||||||
gi|188436604|gb|EY727072.1|EY727072 CS00-C3-703-098-D05-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cD CTGCTCTCTCTGCTCCATCTC EST sequence (targeted fragment marked with yellow): TCCGACCCACGCGTCCGGCCGAATCGAGTCCCAGCACAACACTCACTTAGACCTCCTTTCGTCTCTCCAAAACCTAGTCCCCGACATTGTCCCTTGTCTCGATCTCTCTCTCAATATCATCTCCAATTTCAACCGCCGCAACTACAACCCTACCCCTCCTCTCCCCGAAATCCCCAAATTGCCCCCAAAGCCCCTCACCGCTGTTCATCTCAGTCAAGGACCCCCCTCCGCAAATGATGATTCTCTCGTACGGTCCCCGGAGACTGGGCGAGATCAAAGAGCGGCAAAGTTTGCTGTTGGTGCTAGCGGGAGTCCGTTGGCTGTTGTGAGAGCCATGGTGGCGCTTTGTCTGTTGCAGCGCGTCCCTTTCAAGCCGATTGATTCCTCGATTATCGCGAGAAAGTTGGAGAGTGACGCCAGCTTGACGTCGTCGGAGAAGAAGGCGTTGAGAGATTTGGGCGGTGAGTCCGGTACCGTTTTGGCGGTGGAGATTGCCTTGAAGAGTATTGCCGACGAAAACAACAACGGCGGCGTCGAGCTTGATGAGGTGTCAATCAGTGGAAAATCTAGGGCTATGGTACTGAGTATTGATAAAGTTCGTTTGTTAAAAAAATTGCCGGAAAGGGTTCCCGTAAAGCCGGATTTGATCGAAGGAAGGGGGGCCATTAATCAGAAGGGAGGGCAAGGAGAAAAGGGAAAGTACAGCTTCCACCNGGCCCCCCAGAATAGGGGGGAACCAGCCGAGAGGGTGGGAGGAGCAGCCAAATGTGGGAACGAAAACGAGATTAGATTGCCATGAAAAGAAGCTAAAAAAAAAATCTACAGGGAACAAAAGGGCCAAGACCGGAAGGACTCGTGGATTGATGGCAGGAGATGGGGAGAGAGGGCAGGCGGC | |||||||||
gi|188332602|gb|EY752943.1|EY752943 CS00-C5-003-017-B04-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA se CTGCTCTCTCTGCTCCATCTC EST sequence (targeted fragment marked with yellow): ATTGAGAAGGAGTAGAGAGAGAAGAGAGAGAGAGAGAGAGAAAGATGGCAGATTCTTCATGCGATTCGGTTTCCATTGATATGGAGACTCCTCCTCCTAGTGGCAAGGACAATCTTATAAAAACTTCCCATGGTTCTTTGTCTGTTACCATCTATGGGGACCAGGACAAGCCAGCTCTTGTCACTTATCCTGATTTAGCTCTAAACTATATGTCCTGCTTTCAAGGATTATTCTTCTGCCCAAAAGCATGTTCCTTGCTACTGCACAACTTTTGCATATATCATATAAATCCTCCTGGCCACGAGTTTGGAGCTGCGGCAATTAGTGATGATGAACCTGTACTCTCTGTTGATGATTTAGCGGATCAAATCGCTGAGGTTCTTAACCATTTTGGACTTGGTGCAGTGAATGTGTAAGGGGGTTACAGCTGGAGCTTACATTCTTACACTATTTGCTATGAAATAAAGCCCCGTGTACTTGGGGTTAATCCTTATTTCTCCTCTGTGCAAAGCACCCTCTTTGGAAAGAATGGGTGTATTATAAGGTAAAGGGCAAATTTACTCTACTAACATGGAGATGTGGGGGGTGGTTGAAAAGAATTATTGTCTAAAGCTGAACTTTATCAAGAATTTTTGTGGTAAAGGCCCAAAATACCAAAATCAGAAATTAGATTCAAGTATGTAGAAAAAAATGCTTGGATGTAAGAAAAAAATTTTATATGGTTTGGGATTTTTTCTTTAAACTATTTATTGAGAAAACCCAATTTACACCTAAAGGGGGTGAAAAAATATGGCAGATGACCAATTTCAAAAAATAATTTAGGATAAAAATACATCAATTTATCAATTATAAAGGTTTTTGAAAATTTAAAGTTTATTAAATTTTAAATTAAAAAAAAAAAATTTTCATAATGTGTTTAGAAAGTTATACTATGCTTGAGGGACATCTAAATGATTGGATATAATAAAGAGAATGTAATATACTCTCCCATGAGTACTTACTTGAAGTTGAAATATAAAT | |||||||||
gi|188302195|gb|EY716087.1|EY716087 CS00-C3-702-062-C09-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cD CTGCTCTCTCTGCTCCATCTC EST sequence (targeted fragment marked with yellow): CATGATCTTGGCGATGCGCTTGGGCATGTTTTCGATCTTGCGCCAGACCGGCTTGCTCTCGTGCTTGGCGCACGCGGCGATCACGTCTTCATTGCTGTAAGACGGGCCGAGATAGACGTGTTCCATCTTCTCGACCGGTACGCCACGGGCGTGGGACACGTAGGCTGCCGCACCGACCGCGGTGCCGGCATCGCCGGACGCCGGCTGTACAAACAGCTCCTTGACGTCGTCACGGGCAATGATCTTCTGGTTCAGCTTGACGTTCAGTGCACAGCCGCCGGCGAAGGCCAGCTTGCCGGTGTCTTTGAGGATGTCGCCCAGGTAATGGTCGATCATCTGCGGGGGCAGCTTCTCGAACAGTGCCTGCATGCTGGCCGCGTAGTGGATGTACGGCTCGTCGGCGATATCGCCTTCGCGCTTCGGACCCAGCCACTCGATCAGCTTCGGCGAGAAGTAGAACCCCTTGCCCTTCTCTTTGGACCGGCGCATGGCGATGGACGTTGGGCGTAGTCGGGGGTGATCACCCTCTCGCGCTTTTCCAAGGATGCCATGCGGCGGGAAATGGGACTTGGTGGGATGNCCGTGGGGGGGCAGGCGCAGGAACTTGGACTGGGCGTGGGGGATTAGCGAAAACCAAAAAATCGGGGATGGGGTCAGAAGGGCCGCGGAGTGAAATGGGGAGGGGGAAGGTGTGGGCGCGTGGTGGGTTCTCCTGGCTTCGCGTGCAAACGCCTAAGGGCCGGGGGGCCCGCCGACTGGGGGGGGAACGGCGGCGACCGCCTTCCAGAGCGTTCGAGAGATAGGCTAGAGAGAGCAGGGACGGCGGTGGGCGCGTCAGGGGAGCCGGGAGTGGACGGTGGG | |||||||||
gi|188260275|gb|EY718844.1|EY718844 CS00-C3-702-095-A01-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cD CTGCTCTCTCTGCTCCATCTC EST sequence (targeted fragment marked with yellow): CCACGCGTCCGGTCGTTTTGGGAATAGATTTTTCCCTTTTGATGGGGATGAGTCAAATACCTTGAATGAACCATCGTCAGAGTTCGAGTTGTTTGCTGTTGTCACTCACACTGGTAAACTAGATGCCGGCCACTATGTGACTTACTTGCGGTTAAGTAACAAATGGTACAAGTGTGATGATGCTTGGATCACCGAAGTTAATGAGAATACTGTGAGGGCTGCCCAAGGGTACATGATGTTCTATGTGCAGAAGATGCTTTACTACAAAGCAAGTGAGAAACAGGGTACCTCATGATATGCTGAAGGGAATTGTATGTTGATGAAACCGTGCAGAAAGCAAGTTTGACTGCCTTACTGGAAGTTGTGGTTACCGTGTGTTATTTATTGCCCGCGACGGCTACTTTTTAGGTATACCATACAGTGAATACATAATTCTCCAAGTTGCTTATACTCAGCGATGGAAGACCAAGCAAAATCGCCCAAGGTGTTTTCAAATGGTAATTTATATAATGCTCCATTGGAGTGTGAGCGAGCCTAAATTTTTGAGGCGTTAAAACATTTGGGAAATTGATTTGGAAAGACATGAATTCTTTAGAGATGGATTTCTAAAATAACAATTTTTTCCCGGGTTGGGGGAGGGGTGATCAACAGGGGGGATCTCTTTTACCCCCCGNGACCGTCATATGGCAAAACACGCCACAGGCACGTACAACCGCGAACGCAAGGAAGCGGCGGTAGGGGAGTCGGCGTCCGGGGCGGANGCCGGGATCATGTAGCACGGCACATAGGGACCGGCGCCGCGAGGCGAGGGAAGACGAAGCAGGGAGAAGGAGCAGAGAGAGCGCGAAGCAACCCGGCAGCGCGCGCACGCCCCGATG | |||||||||
gi|188388539|gb|EY681266.1|EY681266 CS00-C1-650-020-B01-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRN CTGCTCTCTCTGCTCCATCTC EST sequence (targeted fragment marked with yellow): GCCAAAGCCCCAAGTTTCTGGTATTTGCATGCTCAGACTCTCGAGTATGTCCATCCCCTATCCTCAATTTTCAACCAGGAGAGGCGTTTATGGTTCGAAACATTGCCAATATGGTCCCTCCATATGACCAGAAAAAATACTCTGGAGCAGGTGCAGCCATTGAATATGCGGTGCTACATCTGAAGGTGGAGAATATTGTAGTCATTGGACACAGTTGCTGTGGTGGTATAAAGGGGCTCATGTCTATCCCTGATAATGGGACCACTGCGAGTGATTTCATAGAAGAGTGGGTCAAAATCTGTTCATCTGCCAAGTCCAAGGTGAAAAAAAGAATGCAATGATTTGAGTTTTGAGGAGCAATGCAAGAACTGTGAAAAAGGAGGCTGTGAATGTGTCCCTTGGAAACCTATTGACATACCCCATTTGTGAGAGAAACCGTGGTGAAAAACGCCCTGGCCACCTAAAGGGACCACATTATGAATTTCGGCAAGGGAAAAATATCGACCTTTGAGGATGTTGCACTTGCAGCATTACACCAATGGGCAGTCTAGGACGAAACGGCCCCCGAAAGGACCAACCCACGCAGGGATTCGCGGAACAGCTTCACAATGAAACAATTTCCCAATATCAAACGGCCGCCCAACACCGACGGCTTGGCAGCCCAACAAGAAAACCATCGGACGAGGCGGTACAGACCCAAGCAAGAAACCACCAAAAAAGACGACCCATCAAGCGGCGCTTAAGCTGTGAGACCATGACGCGACCATGCCCAGCAAAAAAGCACTCGGACCCAGGCGGCGCGCAGCAACCAAAACATCTCAATAAAAACCCAAACCAAAAAGGACAAAGGACGCAACACACGACGGAGGCACGCAAAGAAGATGGATCAGAGAGAGAAGCTCACACATCCACAGACAGANACCCGGCAACGCATCAAGGGCGGNTAATATGAGCGCANACCCGGAGCCCCCGTTCATTCTTACTGCCCTTATTATNGAATTTCAATTAAGCGGGCCAANAAAACC | |||||||||
gi|188323195|gb|EY682542.1|EY682542 CS00-C1-650-034-A01-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRN CTGCTCTCTCTGCTCCATCTC EST sequence (targeted fragment marked with yellow): ATGGCCATGTCTCACATGGCGTCCACTCTCCCCTCTCCTCTCTCTTTCCTCCTCCTCCGCCATTCTCTCCCTCCATATATTCCACGTCAGCATTCTCTCTCCTCTCCTCTCTCAAAACGCCAACACTCGCACCAAATCCTCTGCGCTAAAAAGAGCAGCAGCAGCAGCAACAACAGCAAGCAGCAGAAGCCAAAAGCACAAACAGCTTCTAGTTCTTTGGGACCCAAAGCTGGGATTGCCATTTACAAGCCAAAGTCTTATGAAGTACTCGCCGCTGATGCTGCTAACTCACTCGCTTTTGCTCTTCAAGATGGCAAAACCCGCTTGGAAATCGACTTCCCGCCCTTACCAAGCAACATTTCCTCTTATAAGATGAGTTCATAGATGCCAACATTCAACTTGCATTGGCTGTTGTCAGAAAGCTCCAAGAAAGAAATGGAAACCAGAGCTTGCATCGTGTTTCCTGGAAAGCAAGAAAAAGGGGAGGGCCTCTCGGCTTTTCACAAACACCTCTTGATTCTGTTCCGTGAATGACGTCCCCACTGGTAGGTGTCGGAAGTGTTTTACAACTCCATGAGAACGCCAGGCAATTTGGCTCTAAACCAATAAGAGGCAACGGACGGGGGCACAGAGGACGAACAGAGGCACAGACGAGGGAGAAGGAAGAGGAACGGGCAAGGAGCGAAACTGAAAGTAAAAACAGACGAAAGAAGAAGAGCGAATGGAGCACCAGGAAGGGAGAGATGAAGCAGAGAGAGGAGAGGAAAGAAAAGAAAGCACAACAAGCGGCAGGAGGAGGAGACAGCGAGACACGAGCATACGAAAGCCCAGACAAAAAGAAAAAAGAAACCAACAA | |||||||||
gi|188350305|gb|EY666001.1|EY666001 CS00-C1-102-011-F01-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) CTGCTCTCTCTGCTCCATCTC EST sequence (targeted fragment marked with yellow): CAGGCGCAATTGACCGACAAGCGTGCATTGGTGGATGTGGTGGACTGCTTGCACCGCGACCTGATGATCGCCGAAGGACGCCTGGAACCCTCGGTCATGGCGGCCCTGCGCAATGCGGCCCTGACTCGGCCGAATGCCTGTGCATGAAGATTTATTTTTGTTGGGAACCTTCCTACCGTAAGGCGAGTCAGATTTTGTAACAGCGAGATCAAGCATTGTGCTCCGGTGCTTGTGGCTCGTTGTTACTGGTCTTTTTAGGCCCTTATTAACCCCGAGTTGTCTCCCCACTGCTCGGGGTTTCTTTTTGCCCGCGATTTGTCATGGGCCGGGGGCCTCCTGGAAAAACGTCGGGTTGTCTTGCAGGTATTGCTCACGCATGACCGGGTCGAGCCAAGAGGCGTAGGACTGCCGCAGTTGCTCCTGCGGGATCTCGCGCAGTACCTGATTGATCCGCTCGATAGCCTCGCGCCCTGCCGCGGGATCCGTGCAGCCGATATGGGTCAGTTGAAAGGGCGGGAGGCCCTTGATGGGATAAAGATGACGGCCTGGGGATCGAGAGCCGGTTGCCAGGAGTAGAGGAGGACGTATGGTGAGTAACCCGACGCCAGCCCGGAGCGGCGCCGTGCGCTGCCTGAGGGGGAGAGCCGGGTGCGGCAGATGCGGGAAAGGCACGGCGCGGCGTGGGACGGGGGCGGGGTTGCGAGGGGGGGGCGACCAGGGAGGTGCCCGGGGTAGGGGCGAAAGGCCGCGGCGAGCATATGTGGGCTGGCGGGGCGGCCGCGGGCGGCGGGGATAGAGCAGAGAGAGCGGCAAAAGGGGAGCGGGAGCGCAGCGGGGAAGGACGCGCGGGGCGGCAGAGACGGCCCACCGAAGCAAGCACGACGTGGAGAG | |||||||||
gi|46212884|gb|CN187947.1|CN187947 UCRCS05_0005E10_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA CTGCTCTCTCTGCTCCATCTC EST sequence (targeted fragment marked with yellow): GATTTGTGATGGGGCAGAGAGAACACAGAAGAAAGGAGGGCCGTTTAGGTGTGCTAGAGTGCTGCTCATTATGTGCGTCACCTTGATAGTCCTCTTGATTCTCAAAGAATTATTCTTGTGAAATTAACTGTTTGTTACTGAGTAGTATGCTCCTGCAGTGCGTATTGTAAGGAAACTGCAAGGATCAGCAAGTTGATTGGGAAGATTGCAACATGGCTGTGGACACACACAGTAACCGAAACAAATATATGTTGGAGCATTTTTTTTTTAAAATTTTCCTTCACCTTTTTCAGGCTCCCTTTTCATAATTGATCAATAGCTGAGAACTTTGACCGGAGCAATGGGTTTATTTTT | |||||||||
gi|188265263|gb|EY709331.1|EY709331 CS00-C3-701-113-A08-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cD CTGCTCTCTCTGCTCCATCTC EST sequence (targeted fragment marked with yellow): GAAATCCAAAGAAGAGAAGAGTGAGAGGGGGATGCAATTACAAGGGTGGAAAGTGGGAGAATTGTCGATAGCAGGCCACGAGACTTGCATAATTTTCCCCTCTCTCGATTTATCGTTCGATATTGGACAATGCCATTCTCGAGCTATCTCTCAAAATTTCCTCTTTATCTCCCACGCCCACATGGATCACGTTTTGAATCTGATGTCTATGTCAACAGCTGGGATCCTACTATATCAAAATTGTTGGTGGCGATATCAGCTCTGTGCAATCAAAGAAACATGTATCTCTTACCGACTGATGTTAACACCCGGTAAAACAACCTCAACCTTCTCCAGTTACACTTCTACAATTTGATATTCGAGAAGTTATAACTCACTCCTCATCCTAAGGGGCCACCGGGCCGGCAGGTGCATCTTGTTCTTCTTCGAGTCGAGCTATACTAAGAAATGAAAAATACCAGGTGTCGTGGGGAGGCGCGGCACCCATTCCGGACTGCTCCCAGCGCCGGCGGTGTCGTCCCTCTGTGGGCGCCGCCGGGGGAGAACAAAAAATGGAGAGAGAAAGAGAGGAAGAGGGGGAAGGCGCGGGGAGAGGGCGAGCAGAGAGGGTAGAAAGGGGGCCAAAGGGGAGGCGTGGGGGAGAGGGGGGAGGTAAGGATAGAGAGAGCGAAGGACGGAGGGGGTACGTGGGGAGGAAGAGGGGGGGAGAACGCATAAATCCATCATCGCTTAGCTCTCGTACACACCTAACAGGGGGCCTGTATCGGAACGAGTAGCGGCCCGCCGGAGACACGAAGTAGAAACATAGGAAAGAAAAAA | |||||||||
gi|188268888|gb|EY678102.1|EY678102 CS00-C1-401-044-D01-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA se CTGCTCTCTCTGCTCCATCTC EST sequence (targeted fragment marked with yellow): CGGACGCGTGGGCGGCCGCGTGGGGTAGCCCTCGCAGAACAAAAAATGATTTTCCCCCTACTCCTCTCCGTTTTTCTTCGCGGAGCTTCTTCATCAATCCTTTCCGAAGACACACCTATTAGCTTCTCATTTCCCTCATTCGCCAAAGACAGTTGTGACAATAAGACCCTCATTTGCTACGGAGCGATTGAAAGTTCCGGCGCCTTAAGCATCACACCAGGCCCTCCACCAAACCTGCCGATCAGAAAGGTTGGACGGGTTTTATACGGCGAGCCTCTGAGTTTACAGCGATCTTTTATTGATACCACCATCACCATTAAGATCTCACGCCATCAGAATTACACTGATCGTGCCGGAGATGGGATGGACGTTATTTTTGCAAGCGATAAAAACGGTCCATTCAGCAAAGGGGCGTGGGGGGAGATGTTGGGAATGACGTCTTCACCGGGCGAAGAATTTTCCTCCATTAGACCTGGGAGCTGGACACATGCCTGGAACACGAGCCTGATGGAGTCCAGATGATAACCTTGTTGGGCATGCGAAGGGAGCGAGAGTGGAATCCGAGTCCGAAGTAATTAACGGGGGTTGGACATTAAATTCATGAAAGTGGAGGAACAGGACCCAGGGTGGAAAGTTTAATGTCAAGGCGCAATATCTGTGAGAAAAGCCCTGGGGGTGTACGGGGGGAGAGCTCGGGGGGGATCGAGAAAGGGGACGGGGGGGGGGAGGAAGGTTACGGAGGAGCGGTGAGCGGGAGGAATGCTCAGAAAAGATAAGGATGGAAAGGAGGAGAGAGAGCAGAGCAGGCGAGGGGGGGGGAGAGTGTGGTGAAGGAAGAATGAGGAGGGAGGATAGAAAAGCAGATGGAAACTCGGACCGGAACGACCGCGCCGGTCAGAGGAGACAAGGGAGGTCATGGAGGAGGGCGAGAGGAAAACAATTGCTGCGAGTGAGGGAGGCGCGAGGAAAGGCGAAAGACTGTAGAGGGGATAAAATGCGGGAGG | |||||||||
gi|188445848|gb|EY686880.1|EY686880 CS00-C2-003-030-C01-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequ CTGCTCTCTCTGCTCCATCTC EST sequence (targeted fragment marked with yellow): CCACGCGTCCGCGGACGCGTGGGGTAAAAGTTTGTGAGCATTGTTCAGAAGTTCATGTTGGGCCATCTGGGCATAAGGCTCGGCTTTGTGGAGTGTTTAAATATGAGAGCTGGCGAGGAACCCACTTTTGGAAGAAGGCTGGGGTAGATGATTTGGTACCTCCAAAGATTGTTTGGCATCGACGCCCTCAGGACCCTCCTGTGCTTTTGGATGAAGGACGGGGCTATTATGGGCATGCACCAGCAGTACTGGATTTGTGCACAAAGGCTGGTGTTGGCCCTCCAACCCAGTATCTTACAATGATCCGCGCTCTACGCCGATCAGAACCTGTTGGCTCTGCACCTTGCGGAGATCTGCCCCCTCCCCCGCCACCACGCGCCCGAGTCTGCCGCGCCCCTAAAGCCCCCGCCCCGCCCCCCCGCCGCCTTCGTCCACCCCCCGCCCCCACCCGCTTCCCGCCCCCCCGCCGCCGCGCCGCCGGGGGGGACAGCGGAAGACCCAACGGAAGGACGACTAAATAAAAGACGGAGGGGACAGGGGGAGCAAGGGCGGAGGGGGGGGAGAGGAGAGGGGGAGGAGGGGGGGAGGGGGGGGAGGGGGGGCAGGGAGAGCGGGCAGGGACGGCGAAGGGGGGAGACACGACCGCCGGGGACCCACCGCCCCCCCCCGCAACCCCCACGCACCCACCCACGGAAATACCCCGCCGTGCGAAAACGCACAGCGACCGAAGAGAGAACCGGAACCCACGACTCGCGCGCCGGGGGCCCCGCCCGCCGCCCGGCCGCCGGGTGGGCGGAACCCCCACCGCGGCTCGAGACCCTCGGCCAACGCCGCCCGCTAGACGTACGCCTCGCCCGCCGCCCACCGCCCTAGCGCGTCTGGCCCGCGCGGCCCTCGCAGAGGGCGAACCCCGCGCGCAACGCGCGCGGCCCGTCGGGGTCCGCGGACGCACCGATG | |||||||||