mature miRNA: CTGGCAACATACCAGACCCA species: Populus trichocarpa database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
Predicted miRNA targets | |||||||||
gi|73887955|gb|DT490693.1|DT490693 WS02545.B21_K23 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02545_K23 3', mRNA sequence CTGGCAACATACCAGACCCA EST sequence (targeted fragment marked with yellow): CCGTCTTCCTTTTATGTTAAAAGTCTTCATCTGATGTCAGTGACCTATCTTACTAATGAGATCTTATAAGCTTCGCACTTTCCGCTATCGAGGACCGCTACCTTGGTTTAGGCCTGAATATCACTTTAACCTGGCTGATGCCTTGCTTGATTCCAGACAAGGCCCTGGCTACAGTAGCTTCTCTGGCCGTGACTTTGACTCGGTTCTATTGACTATAAAGAATGTAAAAGTGCTTACTCTATGCAAATGGACTTTTGAGGCGTTGATCTGCCCATCGCTATCCACATTATTTGCAGATTTCCAATTCTATAATTTAAAAGAGTTGTGGTGGATTGATAATTCAAACGAAAGATATGACGGGGAAGCTTTAATCACTTTCCTGAAATTATGTCCTTCATTGCAGCAACTCTTCGTGACAGTAAGTGTTTTACGTATATACAGAGGTCAGACTTTTTATTTCCTTCTTTATGACGATTTCCAGTTGAGTATACCACAGCAACTTCTTTTATGAATGTCTTTTTGATGTACATTTGGACAAGCTTCTAGACAGCATTATCAAGGCTTGTGATCTCCGAGACATATTGTTCATTGACAGGTTCTATTTATTTTTTTTTAAAAAAAAAACAAAGCTGCAATGGGCTTGGTATGTTGACAGAGATTTTACTATTTCCTAAGAACTGCAAAATTTCCGATATGAACTTAGCTTTATTCCAATGCCAAAAAAAAAAAAAAAAAACTCGAGGGGGGGGCC |