| mature miRNA: CTTGGATTGAAGAGAGCTC species: Pinus taeda database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|68029537|gb|DR168408.1|DR168408 RTPHOS1_25_F07.b1_A029 Roots minus phosphorous Pinus taeda cDNA clone RTPHOS1_25_F07_A029 3', CTTGGATTGAAGAGAGCTC EST sequence (targeted fragment marked with yellow): TTCCTTCGTGCCGAATTCGGCACGAGGCTCAAATGGAGATTAATTACATTCCAAAATTCACAATTAAACATATTTATACCTAACCACACACATCAGCAGACATACGTTACTTTGGCAATTCCACATCGACCGGGCAATAAAAAAACACACCGAAATCCTCTATCAGCGGGACACATGGTGTGCCACATCAGACTTGAAAAAATTAAAATCTCGGAAATCTTATTTGGCTTTAGCAGGAGCCATTATTCCCTTAATCGACTTGACAATCTTCTTGGCAATCCCTTCATTGCGGATCTCTTCGATCTCTACTCGTCTGACTTGGGGTTTAGGCTTGGGAATCGTCACGGTCAGCACTCCATCAACGCCCATTGCAGCCTTCACAGCATCCACGTCAGCATCCTCGGGCAACCCCAGCCGCCGCACACGCGTCCCAATAGTAGGACGTTCTCGAACGTGCCACGTGGCGCCCTTGTCATCCCCATCCTCGTCCTGCTGCTTCGCGCTGATCTCCATGATCCCACTGTGCGTCTGGAGCTTCACATTTTCTCTCTTCAATCCAGGAAGGTCTGCCTTAATAATGTGAGCATGGGGCGTTTCTTGCCAGTCGACTGCAATGATTTCATATGGATCGCCATTAACTGTGCTGAAAATATCTACGCTCATTTTGTTGATACCTTAGTTTTCTTCTGTTCCCGATTACACAGAAAGAAAGAGCTTGAAAATGATCACTGTGAAGCAAAATCGAAGACGAAATATTTAGAGAAACGG | |||||||||
gi|67961335|gb|DR163367.1|DR163367 RTFE1_42_B08.g1_A029 Roots minus iron Pinus taeda cDNA clone RTFE1_42_B08_A029 5', mRNA seque CTTGGATTGAAGAGAGCTC EST sequence (targeted fragment marked with yellow): AATCTCAATGCCTCAATGGAGATTAATTACATTCCAAAATTCACATTTAAACATATTTATATCCTAACCACACACATCAGCAGACATACGTTACTTTGGCAATTCCACATCGACCGGGCAATAAAAAAACACACCGAAATCCTCTATCAGCGGGACACATGGTGTGCCACATCAGACTTGAAAAAATTAAAATCTCAGAAATCTTATTTGGCTTTAGCAGGAGCCATTATTCCCTTAATCGACTTGACAATCTTCTTGGCAATCCCTTCATTGCGGATCTCTTCGATCTCTACTCGTCTGACTTGGGGTTTAGGCTTCTTTGGAATCGTCACGGTCAGCACTCCATCAACGCCCATTGCAGCCTTCACAGCATCCACGTCAGCATCCTCGGGCAACCCCAGGCGCCGCACACGCGTCCCAATAATAGGACGTTCTCGAACGTGCCACGTGGCGCCCTTGTCATCCCCATCCTCGTCCTGCTGCTTCGCGCTGATCTCCATGATGCCACTGTGCGTCTGAAGCTTCACATTTTCTCTCTTCAATCCAGGAAGGTCTGCCTTAATAATGTGAGCATGGGGCGTTTCTTGCCAGTCGACTGCAATGATTTCATATGGATCGCCATTAACTGTGCTGAAAATATCGACGCCCATTTTGTTGATACCTTAGTTTTCTTATGTTCCCGATTACACAGAAAGAAAGAGCTTGAAAATGATCACTGTGAAGCAAAATCGAAGTCGAAATATCTAGAGAAACGGCTTGAAA | |||||||||
gi|67489395|gb|DR091042.1|DR091042 RTAL1_19_B08.b1_A029 Roots plus added aluminum Pinus taeda cDNA clone RTAL1_19_B08_A029 3', m CTTGGATTGAAGAGAGCTC EST sequence (targeted fragment marked with yellow): GACGAAATAAAGTATACACGCATTCCAGAAAACCCATCGAACCCTAACGTACAAGGGGGTGGGACTAGTAGTGACAACCTAAGCTAGACTGTAAAAGAAATGTCTAAAGAGTTACAGCAGACCAAAAAATCGCGGGGGTGAGGACAATAATCAAATGTTTAAGCAGGCGGTGTATCATATTCATAAGGTGAGATTGTGGTGCATGTGTGTGGTGGAGTATGTGCTATGAGATGAGGAACGAGGTGAGGATAAAAAGAAAATAAATGCACGTGTGCCAAGGACGAAAACCTAGCACGTTCTGAGCAACTCCTGTGCCCGTCGGGCGTGGACTTTTTCGACCAGTAAGTTGGCGGTTTTGAAGGTAGATGAGTACATGTGGTTTATCCCGTTTTCTTCCAGTATTTGCGAGTAACGGTTGACCAGACCATGCTTCTCAAGTCCAAATTTTCGAAGATCGATTTGCAGGCACTTTAACGGCCCAGAGAGCTGAAGCGAAGAGCTGTCACAATCCTGGTCCTCTTCGCCTTCCGAAAGGTCATCGGTGCAGATGAGCATGTGTCTCTCGTTTGGAGGGAAGAGAGAAGACACGATTGAGACATCCGTCGTCAGCGAAGACCCCTCTTCAGTCCGAGTGAA | |||||||||
gi|61669497|gb|DN611997.1|DN611997 EST965047 Subtracted pine embryo library, Lib_B Pinus taeda cDNA clone PSAB941, mRNA sequence CTTGGATTGAAGAGAGCTC EST sequence (targeted fragment marked with yellow): ACTCTAATTCTATCTGAACATATGCTAATCATGTATCTTTTATACAATATGTGAAGGAATAAATGCTTTGCTTTGCTTTGCTATTTTCCAAGTTGTTGGTGGTAAATACTTTCACCATACAGGAACCATTTACACATGGTGATGTGACAGTGTATCAGAATCATAGAAATTGGGCATAGCATTCAGTGTATGGGATGACTAACTGAGAGTCTAATAAGATCTCTGTATACTGTAGTTGTCCATGAATTCCTGGTATGGGTTGAACAAAGAAGATGGCTCTGAATTATCCAACTGGAAGAAAGGGCTCTGCACAATGTCCAGACCCAAGTTGAAATTCAAGCACTGCCCTGACTGCTGCTGCTTCTGAATGAGCTGGTTTGCCAGTTTAATGTTCATCTGGACTTCATCCGTGGTGGTGCTCTGGTGTTGACAGATAGGATTCATGGGAGGAGTAGGAAGATGAGGGTTAAAAAGGGATGAATTTGTGGATGGGAGCCCAGCTTCTGCAGACACAGTTGAAGCATCAGTGGGAGATGGCTCTGAAGGGACACTCTGCGTTTTCTTCTGCTGCTCCACAGTTTCCTGCATATCGTGGAGTCCCACAGTTTCCTGCATATCGTGGCGGGACTCCATTTCTTCAGCCAATTTCTTCTCTTCTAGTCTCTCAGCACTGCTCTTCTTGTTGTATATGCGGCACAGCACCCAATCATCCAACCGTAGAGTGTTTTTCTTCCTGGCTGCCATATTGATTTCTGCCATGCGATACTCATGCATGATCCAGTTGGGTCTTGGATCCATTGGGAGCCTTCCCTTTGTAAAAAACCAGAGCCTTCTTCACTCCAACTCGCTTCCTCCCGCCGCAAGTCGTGATGGGTTTATCTGCGCCGGTGGCCTTCCAGT | |||||||||
gi|74159168|gb|DT629100.1|DT629100 EST1155670 Subtracted pine embryo library, Lib_B Pinus taeda cDNA clone PIMD561 5' end, mRNA CTTGGATTGAAGAGAGCTC EST sequence (targeted fragment marked with yellow): ACCTCGGACAGCTCGGCCTTCTTCAATTCAAGGATCTTAATGCAGACAATAGCCCATTTCAACGGACATATGCTAATCAGGCGAAACGATGTGGAGAAATGCCACGGAAGTTGCGCTTCTTTAGAGAACAAATGATTAAAGCTGGGTTATCTCCTTTTACAAGGTCTGCTTTACGTCCAGATATTGAGTTGGATGACCTTGAGATAAAGCTTGGTGAACTTGAAGCAGAACTTGTAGAGATTAATGCAAATAATGAAAAGTTACAGCGTTCTCACAGCGAGCTTCAGGAATTTAAGCTTGTACTTCAAAAAGCTGGTTCATTCTTCTCATTAGCTCGAAGTGATGCGTCTGCTCATCAGAGAGAAATAGAAGAAACCTCGTATGTTGGGGAAGGATCTATGGATAGCCCGTTGTTATTAGAGCAGGAAATGTTGACAGAACCTTCAAAGCAAGCAAGGCTGGGGTTTATTAGTGGTCTTGTTCCCAAAGTAAAGGCAATACCATTTGAAAGGATTCTTTTTCGTGCTACAAGGGGTAACATGTTCTTAAAGCAGTCTGCAGTTGAGCAACCTGTCACTGATCCTGTCTCAGGTGAAAAGGTTGAAAAAATTGTTTTTGTTATATTTTATTCTGGAGAGCGAGCAAGGACTAAAGTAATGAAGATTTGTGAAGCCTTTGGGGCAAATCGCTATCCTTTCCCTGAAGAAATCAGTAAACAAAGGCAAATGATAGGAGAGGTTTCTGGCAGGCTCGCAGAGCTGCAAAGCACAATAGATGCTGGCATTCGCCATCGGGATAATGTGTTGACAACAATTGGATATCAGTTTGAACAGTGGAATC | |||||||||
gi|34507548|gb|CF478679.1|CF478679 RTWW3_16_H01.g1_A022 Well-watered loblolly pine roots WW3 Pinus taeda cDNA clone RTWW3_16_H01 CTTGGATTGAAGAGAGCTC EST sequence (targeted fragment marked with yellow): TGCAGCTCGACTTGCTGAGTATTTCAAGTCTACAAAATGTCAAACTACTGTCGTTGGAGTTCCTGTCACACTTGAAGGCGATTTAAAGAATGAATTTGTAGAAACAGATGTAGGCTTTGATACTGTATGCAAGGTCAGTTCCCAACTCATTGGTAATATCTGTCTTGATGCTCTGTCAGCTGGGAAGTACTATTTCTTTGTACGACTTGTGGGGAAAGGGGCATCACATGTTGCTCTTGAGTGTTCTCTTCAATCAAATCCAAATCTGGTGATTCTTGGAGAGGAAGTTGCCACATCAAATATGACGCTTTCTCAAGTGACTAATTGTATTTGTGATGCTATTCAAGCCCGTGCAGAGAAGGGTAAGTATCATGGTGTCATTATTCTATCGGAAGGCCTCATTGAGAATATTGTGGATATTCGACTTCTAATACAGGAAATAAAGGGCTTACTAAAAGAGGGCATAAGCACTAAAAAATGTCCATCACTACTTTCACCTTCGTCAGCTGCTCTGCTGAAATCTCTTCCACTTTTTATCCAAAAGCAGCTTCTCGAGGAGATGGAGACAGAGGGATTGAATTACTTGTCAAATATAGAAACTGAAAAACTTCTGGCAAAACT | |||||||||
gi|74167500|gb|DT637429.1|DT637429 EST1152360 Normalized pine embryo library, Lib_D Pinus taeda cDNA clone PIMH355 3' end, mRNA CTTGGATTGAAGAGAGCTC EST sequence (targeted fragment marked with yellow): GCTGAAGTCCAATCCAAATTCCATGGTCTCCTTGAGCAGTAATAGCAATAATAATAGTAATAGTTTCTATTCTGTATTTGGGGCTTCGGGCCTCAAATTGGAGCTCCCTTCAAGCCAATCAGCGGGGTCTGCTGGAAGCGCAGACACGCCAAAGTCCAATCTATCTTTTACAAATTTTTCCTCCTCTTCTTCTTCTTTTCAGCAAACCAACTGCCTGATTTCAGAGGCGGACAGTTTTAATGACAACAACTCGGGACTCCTGGAAGCACTACTCATACAGGAAACACAGTGTCGTAATAATAATAATAATAAAGATTTGGATTC | |||||||||
gi|49444111|gb|CO362794.1|CO362794 RTK1_5_G04.g1_A029 Roots minus potassium Pinus taeda cDNA clone RTK1_5_G04_A029 5', mRNA sequ CTTGGATTGAAGAGAGCTC EST sequence (targeted fragment marked with yellow): AGGCCTCGGTCTCCCATCTCGATACTTCCATAATCGATGTACCATCGACACTCGCAACGCCAAGCCCAAGCCCACACTCCTACCCCGGCGTACAACCAAGGGTACGGAGGGTACGCCAGTCCGCCACCGCCGGTACATGGAGGTGCAGGGTACCCTGGATATGCCCCACAGCCCCCTCCAATGCAACCCCCTCCAATGCGAGTCGCACCACCAGGCGCAGATCCGGAACTCTGGCATTGGTTTTCTGCGGTAGATGCGGATAGGTCGGGGTCCATCACTGTCACTGAGCTGCAGTCTGCTTTGGTTAACGGAAACTGGACGAGATTCGATCTTGATACCGTCAAGATGCTCATGAATATTTTCGACACCGATCGAAGCGGGACCATTGGTTTTGATGAGTTCCAAGGACTTTGGCGATACATCAAAGAGTGGCAAGACGTTTTCAAACACTTCGACCGCGATCGCTCCGGTTCAATCGACGGGCAAGAGTTGTCCGCTGCCCTCAAAAGCTTTGGTTATCAGCTCTCCCCGATGTTACTAAACATGATCGAGCAGAAATATGCTTCTGGGCCGGTAGCGGGATACGGCCCCCCGCCCGGCATCACTTTCGATCGCTTCGTGAGGGCTTGCGTCGTGGTCAAGACGTTGACTGAAGCTTTCCAAGCTGTTGACACCGACCGGGACGGATGGATTCAGATAAATTACGAACAGTTCATGAAGATAGTGCTCAGTGCCCCCTGAGAGTCCTCTTCGATCCAGCAAATGGATTCGAATCCCTTTCCCCCGCGTTCTTCTCGGGGTGATCTCCTTTCCCCTTCAACTTTTCTTCGCCGAACTCGTCGCTCTTGGCCCGTCG | |||||||||
gi|34345441|gb|CF387024.1|CF387024 RTDR1_10_B09.b1_A015 Loblolly pine roots recovering from drought DR1 Pinus taeda cDNA clone R CTTGGATTGAAGAGAGCTC EST sequence (targeted fragment marked with yellow): GCTTTCTTTCAAGCTTCTGCTCGATGGGCGCGCTGGACTATGTATCGAGCTTCTGCGGGGATCGTACTAGACACGTCAAGCAATTACAGCTGCAGACTGTGGTGTTGAGGGTCCGCAATATAGATTGTGACGGCTGTGAGGAGAAAGTGAGGAGGTCAGTCTCGTCCATGAAAGGCGTGCAATCGGTGGATGTGGACAGAAAGGAGCAAAAGTTAACCGTAACTGGATACGTGGAGGTATACAAAGTGCTGCGGAGGGTGAAGCGCACCGGCAAGCCCACAGAGATTTGGCCTTATGTACCTGCCGAAGTGGCATACCATCCCTACGCTGCTGGGGCTTACGATAGCAAGGCTCCTCGCGGCTACGTTCGGGACGTGGACCCGGGTTACATGACGAACCCTAATCGCACAGACGAGCAGTACACTTGCATGTTCAGTGAAGACAATACAAAGGGCTGCACCATCATGTAGATGTACAGTCAAAACTATTTATTGGGGCTGCGGTAGTGGAAGAGGCTCCCAGCTTTTTCTCAACGCCCTCCGTTCTCGGTGACTGGCGGTGTAGGTCGGCTTCTCCATTTTTATAATTATATTTCTGTGACTGGAGTTCTTTTCGATCCAATGGGCTGTTCGTGAACAAGGGTTCCGCCATGCAAAAATTATCAAATGAGAAGAGAGGCCATAAGCTAAACAACGCGAACAAATAGTGATCGTGTTGAGCTTCCTTGCCCTATTCCTTTATCTGTCATGTCAGCATCCATACATTTTGT | |||||||||
gi|70770364|gb|DR681888.1|DR681888 EST1071963 Normalized pine embryo library, Lib_D Pinus taeda cDNA clone PWAA328 3' end, mRNA CTTGGATTGAAGAGAGCTC EST sequence (targeted fragment marked with yellow): GTAAGTATTATATATATTGGATTTCTGTATAGCTCTCTTCAGTCCAAATGGAGGTTTTCATGAAGGTAGATCAGCTGCCGACTCACCCGTCTGGCTCTTCTATGAAGGAAATCAATGGCATAGACTAGCCGAATGGTTGATGCGGGAGCTGGTTTCTTCTCTATGTTACCCTCTGTTGGCTTGAAGGGAGCGAGACAAATCTATTTCTGTGTAATATACCATATTGGTGAATATACTTGAATATGAATGTTTAATAGTTAAAGGATGAACATTGAAGAATGAATATGGTTTTTAAGGTTAAACACCAAAATTTTATAATAGTTAGACAACTCCATTTTAGTTTTGGGTGTATGTTCTCCTCTTATTCAATGTTTTTAAAGTTTTTGCATTCAGCATTCTTTTAGAAAATTTCAATGTTGATAATTAAAATCTGATCTTCAATGCCAGAAATCAAATATTTTAACATATTCTAATTGTATAGGATAGTCCTGAATTATAGTATATTCAGGAATCAAGGATATTCGCATATTTTTATTATTCATCGTTTTATTAGTATTATATTTCTAATTTCGCTCTCTGGTTGATAGATTCGTGAAATGTGAACTGTCTAACTATGAAATTTTTACCTATAAAATATAATATGTATTATTTAATGTTAAAATGTTTGCATTTTTATCAGTTCAACCAGCAAGCCAATGCCTATCAGCATTCACAAACCGTGAC | |||||||||
gi|67560399|gb|DR101044.1|DR101044 STRR1_70_D10.b1_A033 Stem Response Resistant Pinus taeda cDNA clone STRR1_70_D10_A033 3', mRN CTTGGATTGAAGAGAGCTC EST sequence (targeted fragment marked with yellow): CCTTAAAGTTTTTCTATTGCATTAAGCGAAATATTCACCAAGGGTTCAACTAAATTCAAAATAGGATAGAGTACACGACGATCACTCTCCTCGATATATAAGAAATCAGTATTCAACATTTCAACTATTTAGTTTGAGCCTATGAGCCTACATAAAATAGAGGAAGACCTTCATTTATCTCATAGCCCCTTGGTCCTTCCTTTTCCTAATGCTTTACGTGCTAATTTAAGACCAAATATCTAGAAAATCTTCTTGCCCCTAGCTTAGTTTCCATCGTTGCATGAAATTTTCACGCCAAGCTATGAAAGGGAAGAGACGGAATCTTTGCATATACATAATGAATCTTTGCACCCGGAAATGAAATGAATAATGAACAAACTGTGGTGACTTTGTTGGGTTGGCGTATGCATAGATCATAGGGTATGATGATGTCACTGATCACATGGTGGCCGTTGTTTTGGTTTCTTTGTTTGAACTTCTATTGTACTTCATATGGCTCTTAACCAGTTGGCCTGCAGCCAAAGCAGACATGAGAGACAGCTCTCCAGCCAAAACTGCTCCTCCCACAATTCTTGCCAACCTCTGAGCATTCGCCCCAGGAGATTCCACGTTAGCTCCTTTCACTCCAAGGATATTCAGGCAAGCAGCTTGTGAAGCCAACTGTGTTCCACCTCCTACTGTTCCCACCTCAATACAAGGCATTGTGACCGAAACATGCAGATCCTTGCCACCGTTAGATGCCTCCATCATTGTAATGCAATGAGAGCTCTCAATGTTCTGGGCCGGATCTTGGCCTGTTGCAATAAACACAGCAG | |||||||||
gi|61666890|gb|DN609390.1|DN609390 EST962440 Subtracted pine embryo library, Lib_B Pinus taeda cDNA clone PSAAC28, mRNA sequence CTTGGATTGAAGAGAGCTC EST sequence (targeted fragment marked with yellow): ACTCTAATTCTATCTGAACATATGCTAATCATGTATCTTTTATACAATATGTGAAAGAATAAATGCTTTGCTTTGCTTTGCTATTTTCCAAGTTGTTGGTGGTAAATACTTTCACCATACAGGAACCATTTACACATGGTGATGTGACAGTGTATCAGAATCATAGAAATTGGGCATAGCATTCAGTGTATGGGATGACTAACTGAGAGTCTAATAAGATCTCTGTATACTGTAGTTGTCCATGAATTCCTGGTATGGGTTGAGCAAAGAAGATGGCTCTGAATTATCCAACTGGAAGAAAGGGCTCTGCACAATGTCCAGACCCAAGTTGAAATTCAAGCATTGCCCTGACTGCTGCTGCTTCTGAATGAGCTGGTTTGCCAGTTTAATGTTCATCTGGACTTCATCCGTGGTGGTGCTCTGGTGTTGACAGATAGGATTCATGGGAGGAGCAGGAAGATGAGGGTTAAAAAGGGATGAATTTGTGGATGGGAGTCCAGCTTCTGCAGACACAGTTGAAGCATCAGTGGGAGATGGCTCTGAAGGGACACTCTGCGTTTTCTTCTGCTGCTCTACAGTTTCCTGCATATCGTGGATTCCCACAGTTTCCTGCATATCGTGGCAGGACTCCATTTCTTCAGCCAATTTCTTCTCTTCTAGTCTCTCAGCACTGTTCTTCTTGTTGTATATGCGGCACAGCACCCAATCATCCAACCGTAGAGTGTTTTTCTTCCTGGCTGCCATATTGATTTCTGCCATGCGATACTCATGCATGATCCAGTTGGTCTTGGATCCTTTGGGAGCCTTCCCTTTGTAAAAAACCAGAGCCTTCTTCACTCCAACTCGCTTCCTCCCGCCGCAAGTCGTGATGGGTTTATCTGCGCCAGTGG | |||||||||
gi|51495441|gb|CV032616.1|CV032616 RTNACL1_17_G07.b1_A029 Roots plus added NaCl Pinus taeda cDNA clone RTNACL1_17_G07_A029 3', m CTTGGATTGAAGAGAGCTC EST sequence (targeted fragment marked with yellow): ACCGTGGAAAAAAAGAATTTATAAGCATAAGCTATTGCAATATAGGACAAGCTCTATTGCGTTTAATAGCAATTTTTTGTACTACAGCATTGGATTCATGACACAATTTGCCTCGCCTCGAATCACATAAAAGCAGTACGTCCTTAATAATTTGTCTTATCTCTAATGGGCATCGATGACTGGCCATTCGTGATCATGTCCATTCCGGCACATGCACAGCATGAATTTGTTGGAATGTTTGTAGAATTTTGGATACCTGCCAAGACTAACAACGTATCAGTTTAATACAGCAATTTCGGCGAATCACTTTGCTTGTTAAGCGACCAACGCGAACTTGCTAGCTCAGCCTGTAAAGTCGTTAATATAAGGTAGTGTAATAAATATTACGAGGAAACAACAATCTTAAAAAGCGATTGATACAATTCTTTTAATGTGTTATTCACGGTTGACAAGCATGCAGATTTATAACTATTCATAGCAGAAATGACATGATTAAATGTGTTTGCACAGAAGAACTAACATGAATTATTCAATTTACCATAACAAAATATAATTTCACGAATTGTAAAGAGGCAGTAGACTTTCTGGGAGCTCTCTTCAATCCAAGTAAAAACAGCGTAGTGGCAATACGACTCCCGTGTCATGCACACCATTATCTTGCCGCCAATACTGAACCTCGAGGATTACAAGATAGTAGAGTCCATGAACCAGCAGTTGAATCATCCCTATACGGCCTTTCGTTGGACTGAAGAAAGCTCCCCGTAACCTCCTCCCTTTTATATTAGAAATCTAACGTAACATCAACG | |||||||||
gi|57881320|gb|CX646491.1|CX646491 COLD1_9_E05.g1_A029 Root cold Pinus taeda cDNA clone COLD1_9_E05_A029 5', mRNA sequence CTTGGATTGAAGAGAGCTC EST sequence (targeted fragment marked with yellow): GATGAGGAATAAGGACAGGCCTGATCGCCCCGTTTGTTCTCCTCGTCGACGCTCTGATGGAGCTTTCGGTGCAGATGAATCTCAGCCATATATTTCTTCTGACTGCTCACAGCTGTCATCCGATGTGGTAGTGCCCATAAGATCCGAAGTTAATGTTGAAGGGGTTTCTCAGTTCCATCATGGACCAACCCTTGGGTTAACAGATTTTTCTATAGAGGATAATTTATCAGTGGATAATTTTAGTCCCAATCCATCTGGAGCTCTGGGGAAATCCCGTCTTGTTGATTCAACAGGTGCTCAAATTGTCCGGTCAAATCGTATGAACAGTAACACTAATTTTGTGCCTTGCTTGGAGCAATCTTCAATTCAGGGAGAACAGAAAAGTGAGATGTTGATGACAAGCAGGACTGGAGAAAATGGAAATCACAGACAAATTATGAGGCGCCCACTGCCATTAGGATTAAAGGAATTGGACAGTTCTCTTAATGCACCCGAGTCAAAATCTTCCAAGCGAGGTGGTGCTTCGGGCTATGGAAACCATGAGAAGCAGGTTTGGGTTGCGGTTCATAAATCTGGATCTGGTTCTTAAGTTTAATGGAGATGAGTGGGGAAATGCTATGCAACTGATTTAATGTGGGATGTTGACTTTGGTCACTACCTTCAGTTTCGGCTTTATTGTGACTTGTACAAGCTATTGGTGTCTAATGTGTTGGAAGTACGCAACTGGCATGTTTTCAGTTGGTAAAG | |||||||||
gi|68253449|gb|DR385851.1|DR385851 RTHG1_11_F09.b1_A029 Roots plus added mercury Pinus taeda cDNA clone RTHG1_11_F09_A029 3', mR CTTGGATTGAAGAGAGCTC EST sequence (targeted fragment marked with yellow): AAAAATTACTTCCTCACGTTGGGAATAATTCTAGGAAAATAAATTATTCTTGCCCCACAAGAAAAATGTTCCTATTCATTTTGGGGTACAATGCACCGTCTGAAAAAGATGATCATTTTGAGATGTTTTCAATCCATGTGTTAATGCTTTGGACTACATCGCACTTTACTCAACGAAGAAAATGGGAAAAAGCTTTTCTGGTTTAGTCTGCATCCATGTCTTCTTGTGCTGCCTTCGCTGCTTCCTTGGCTTCTTCTAAAAGATCTGCTGGAACCTTTTGATGTCGCCTTTTTGATTCATCACAAATCCAGCTCATTTCCAACTCAAATGCTTTATCTTTCGCTTCATCATGTACTCCATATATGATTTTTGCAACTTCTATTACTCCTTCTCTGCAAGTCATTTCAGAGAGCTTCAACTTCTCAATTTCAGTTTTTGCAGCCTGCCTGCCTTTGCCAATTGCTGTCCCAAAGTATCGATAGGCTACTCCCGATGGCTCAATCATATATAGTTGGGGCCCATCTCTATCATAACCTCCAAGGATAACTCCAGATCCAAAAGGCCTTAACCACCAATATAGTGTGCACAAATGCACATAACTGGCAACACGTTCACAAAGTTCCTTAATAGGGATCGGCTCACCATAAGTGTTTTCATAACTCGTTGCTTCTGATTTAGCACGAGCCACAATTTGCCTACCATCTGCTGCCAATCCAGCCACACCCATGCCAGCATGATTGTGAACAGCATGAATTC | |||||||||
gi|70785317|gb|DR694965.1|DR694965 EST1085058 Normalized pine embryo library, Lib_D Pinus taeda cDNA clone PWAEI91 3' end, mRNA CTTGGATTGAAGAGAGCTC EST sequence (targeted fragment marked with yellow): GATGGAAACTGCGGATTTGAGGAATCAGAGATCGGATGTGTAGGAGACTCGATCCAGTGTCTCATGTGCAGTAAATGTTTGAATTCTAACCAATTGATCTGTGAGTATTCTGTTGGGTTTGTGGGTTTTCGTTGCAAACGATGGAGAAGGGCTCTCGACTTCTAAATGGGGATGCGGAAAAGACAGAGAACGGCATGGAAGGGGATTCTAAGGGCGGTCAAAGCTCCAAAAAGGAGGGGTTTTTCAGGGCAGACAAGATTGATCTGAAGAATTTAGATGCCCAGTTAGAGAGACATCTGTCGAAGGTATGGACTCTGGAGAAGGAGGCCAACAGACCTAAGGAGGACTGGGAAATCGACCTTAAACAATTGGTTCTCAAGGGTAAGATAGCCCAGGGCGCTTTTGGCAGTGTATACAGAGGAGTCTTGGATGGTCAGGACGTTGCAGTAAAACTGCTCGACTGGGGAGAAGAGCAATCGAAATCAGAAGCTGAAGTAGCTGCATTAAGATCTGCATTTCGTCAAGAAGTGGCTGTATGGCATACACTGGACCATCGCAATGTAACAAAGTTTCTGGGAGCTTCAATGGGTTCCTCAGATCTTAATGTGAATACAAATGGTGCCGAAGGTAGCATTGAAGGTCCACCCAATGCTTGTTGTGTTGTTGTAGAGTATCTTGCCGGAGGAACACTGAAGACCTACCTTATAAAAAATCGAAGAAAAAACTCGCTTTTGATGTTGTAATCCAGTTAGCTTTGGACCTCTCAAGAGGGTTAAGCTATCTTCAATCAAAGAAGATAGTTCATAGAGATGTTAAACAGAAAACATGTTGCTGGACAAAACCGA | |||||||||
gi|21824648|gb|BQ699320.1|BQ699320 NXRV126_D04_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA clone NXRV126_D04 5', mRNA CTTGGATTGAAGAGAGCTC EST sequence (targeted fragment marked with yellow): GAATTCGGCACGAGGCCTTCAAATAAGGGGGGAAATGTTGACACCTAATCTTCATGATTGGGTGAATTTATGTAAATAATTAAATTAGGAATGTGAACAGTCATCAGAAGATGAACTGAACAATCACACCCTATTGTATATAACAATAACATACCTGATGGAATAATACGAATCAATTTTTCTGCCTAATGGAGTTACTGCCTGGCCTGACAGTAACATGCTACAAGAATTTCCTAATAAAGAAATCAGTATGTGAAATATAAGTGCACAATGAAAGCCCCACATAAAATTAAATTATACCTCTGATCCTCCACAAGGCTCTAAGAATGTGGTGTACAAAGAAGTCCAAGGGGAGAGATTCTCAAACCCAAAATAAAACAAACATTGCAATGGAGAGGAAGCTCCTCTTTATAAAATGAGTCTCTTCTCCCATACAATAAAGAAATATTTTTTGCTAATTAACTCCATGACAAGTTAGACCCTTCTTCAATCCATGGTTGAACATGTCACAAGTGGACACAAGCCTATCAANNAGNACTCACCTTCATCTAATAATAGNGNNNNNNANNAAATCAATAGT | |||||||||
gi|34350782|gb|CF392365.1|CF392365 RTDR3_7_C12.g1_A022 Loblolly pine roots recovering from drought DR3 Pinus taeda cDNA clone RT CTTGGATTGAAGAGAGCTC EST sequence (targeted fragment marked with yellow): AAGCACCTCGAGCTTTCTTTCTNGCTTCTGCTCGATGGGCGCGCTGGACTATGTATCGAGCTTCTGCGGGGATCGTACTAGACACGTCAAGCAATTACAGTTGCAGACTGTGGTGTTGAGGGTCCGCAATATAGATTGTGACGGCTGTGAGGAGAAAGTGAGGAGGTCAGTCTCGTCCATGAAAGGCGTGCAATCGGTGGATGTGGACAGAAAGGAGCAAAAGTTAACCGTAACTGGATACGTGGAGGTATACAAAGTGCTGCGGAGGGTGAAGCGCACCGGCAAGCCCACAGAGATTTGGCCTTATGTACCTGCCGAAGTGGCATACCATCCCTACGCTGCTGGGGCTTACGACAGCAAGGCTCCTCGCGGCTACGTTCGGGACGTGGACCCGGGTTACATGACGAACCCTAATCGCACAGACGAGCAGTACACTTGCATGTTCAGTGAAGACAATACAAAGGGCTGCACCATCATGTAGATGTACAGTCAAAACTATTTATTGGGGCTGCGGTAGTGGAAGAGGCTCCCAGCTTTTCCTCAACGCCCTCCGTTCTCGGTGACTGGCGGAGTAGGTCAGCTTCTCCATTTTTATGATTATATTTCTGTGACTGGAGTTCTTTTCGATCCAATGGGCT | |||||||||
gi|34348734|gb|CF390317.1|CF390317 RTDR2_18_D05.g1_A021 Loblolly pine roots recovering from drought DR2 Pinus taeda cDNA clone R CTTGGATTGAAGAGAGCTC EST sequence (targeted fragment marked with yellow): TCTTCTGCCTACAATCAGTATCATCCATACTATCTCAAAGTCCTTGAGGCAACACAACAGGGTAAGTTGCATGACAAGGGTTTGGGGTCAAACCAAACTTCTCCAACAGATGTTCGATCCAGTGAAAATCGAAAAACTAGCCAACCTAAGAAAATGAATAATTCAACAGGCGATGAGTCATTACATGCTGCACGTGGTTCTTCTTCAGAAGATATCAACCCTATTCACGCTAAAAAGACACCAGATCTAGATAAAAAAACAAAATTCAAAATAGTACTTGGTGGCTCTAAGAAGGATGGATACGATCATGGGAGTGGAAAGCCTCTTGGTATGACTTCCGAAGCTGCTGCTTCAGCTGTTAGAGCAGCTACAAAGATGCCGACAAGTTTTCGTGGTCTTTCTCAAGGTACCGCAGAAGTTAAGGATAGTGATAAGAAAGGTGGGATGAGTGCTGACGCAGCTGCTGCAATTGTGATGGCTGCTACCAGGGGTTCACGGAGGCCTCAACAGGGATCAGCATCTGAACCTGGAACTTTACGTGGAGGGATTTTACACAAGATACTGAAAGGTATGTCAGAAGAGAGTGATGGGATTGGAAGTGCTGGCGTGAGTCCTAGTCAGGATGGTGATGCATCTCACTTCAATTCAAGCAGCGGTGGTATGCCTTTTCTACAGGCTGGGCAGAATTCTGGAGTCTCTGGTTCTGGTTCAAAATTTGTTCTTGATGGTTGTTTGCCACGTCAGCAGTCTGG | |||||||||
gi|74168060|gb|DT637988.1|DT637988 EST1152919 Normalized pine embryo library, Lib_D Pinus taeda cDNA clone PIMH988 3' end, mRNA CTTGGATTGAAGAGAGCTC EST sequence (targeted fragment marked with yellow): CGGCCGGGGGCTCTACGCCAGGCTGTGGTACAAAGCGGAGGAGGGTTTGGGAAAAGGAAATACCCTCAACGGAAGAGAATAATATATCCGATCTTCCTTACGATTCTTGGTAGAAAATTGCAGCTGGTAATGAGTAGGCTTTTGAAGTTTTAGGATCCGTGAGCGTAGACCTTTGGCATAGCCATGGCAAGAAACGGGAGCTGTTGCCCTCCTATGGATCTCCTCCGGTCGGAGGAGATGAATTTAGTTCAGCTTATCATTCCTGTTGAGTCTGCGCATGATAGCATCACGTACCTCGGACAGCTCGGCCTTCTTCAATTCAAGGATGTAAGTATTCCCGATCTGATCACCGCAGGCCCCTGTCTCACATGAAATGAAGATTTCTGCTGATTCTGAATTACGAGTTCGTTAATTTGGCATTGAATTTTGTTTGCATTAATGTTTAGAGTAGTGCTGTATAGTATAAACCCTGTAAAGTTTGGATATATGGATGGATCATCTTTTGGAATATTATGTTCAGACTCTTCGATGCAAATTGAAGTCTTGCAGCCTTTTCTTGTTTCGACGATTTCTCTGATAAGTGTTGCAGGAGGCATGCCTGTTTGAGTGCCTTAGTTGGACCTTCTTGTGGGAGGTTGATTAGGAGAGTGGCCGAGTAATGGGTATTGCTCCAATAGATTGCCATGATCAAAATTTCGGAAGTGGAAAATGCACGTCTCTAAAGCCTAAATTCACGTTTAAAATCTGGGTGCCTAATAAACGCGGAAGTAGGTTTTAGCCCTGAGCTTTGCCAGTTCACAGTAAGAAATATACATTTTCTCTCATAAT | |||||||||
gi|74160986|gb|DT630918.1|DT630918 EST1145849 Normalized pine embryo library, Lib_D Pinus taeda cDNA clone PIMF240 3' end, mRNA CTTGGATTGAAGAGAGCTC EST sequence (targeted fragment marked with yellow): CGGCCGGGGTAAGTATTATATATATTGGATTTCTGTATAGCTCTCTTCAGTCCAAATGGAGGTTTTCATGAAGGTAGATCAGCTGCCGACTCACCCGTCTGGCTCTTCTATGAAGGAAATCAATGGCATAGACTAGCCGAATGGTTGATGCGGGAGCTGGTTTCTTCTCTATGTTACCCTCTGTTGGCTTGAAGGGAGCGAGACAAATCTATTTCTGTGTAATATACCATATTGGTGAATATACTTGAATATGAATGTTTAATAGTTAAAGGATGAACATTGAAGAATGAATATGGTTTTTAAGGTTAAACACCAAAATTTTATAATAGTTAGACAACTCCATTTTAGTTTTGGGTGTATGTTCTCCTCTTATTCAATGTTTTTAAAGTTTTTGCATTCAGCATTCTTTTAGAAAATTTCAATGTTGATAATTAAAATCTGATCTTCAATGCCAGAAATCAAATATTTTAACATATTCTAATTGTATAGGATAGTCCTGAATTATAGTATATTCAGGAATCAAGGATATTCGCATATTTTTATTATTCATCGTTTTATTAGTATTATATTTCTAATTTCGCTCTCTGGTTGATAGATTCGTGAAATGTGAACTGTCTAACTATGAAATTTTTACCTATAAAATATAATATGTATTATTTAATGTTAAAATGTTTGCATTTTTATCAGTTCAACCAGCAAGCCAATGCCTATCAGCATTCACAAACCGTGACTTAGTGACTGTGCCGGTCTTAACATATTCGACTTTCA | |||||||||
gi|70774493|gb|DR686017.1|DR686017 EST1076094 Normalized pine embryo library, Lib_D Pinus taeda cDNA clone PWABB24 3' end, mRNA CTTGGATTGAAGAGAGCTC EST sequence (targeted fragment marked with yellow): GGAATCCTATGCCATTTTCTGGGTTGGGTAATGTTTCCATGGGCCCTTTGTTTTATCAAGCAAATCCAATCCAGCGAGTCAAGAGAGTTAGGGACACTAGTTTCATCATGGGACCCCCTTCCAGCCCTTTCGGTCGCATGGGTGTGAATGGTCACATAGGGATGAATGATGTCAGTAAGAGCTTGCAGCCTGGATTTAAGGCCAGAGTTCCTTACCCCCTCCAAGCTGCTAGATCGGATTCATTCGTTGCTCAAGGCTGCTTTCCCTATGACCCTAATCTCAGCAGCACTAGTAATCTGCCCCTGGGAGGGTTTTCATCAGGCAGCCATGCCATTATGAATGGTACTTTCTCTTCTTCTAGGCTTTTTTCTGGCCAGAAGCTGGAGCTCCCTTCAAGCCAATTTGCTGAGTCTGTGCAGACTGCAGGCTCAAGCATCAATCCAGTTTTAAATAGGAGCACTCCTCTTTTGCTGCCGCCCGTTCCTACTCAGACGATCAATCAAGTAGACTACAGCTTCTCTACGCCAAAAAATAGTGGGTTGTTAGAATCTATGTTCCAAGAAGCTCAAACAATGGGTGGGGGTTAAGGCTCATTCCTCCTCAAATTCCTCGATTGACCTGCAGGGGGGCTCCAAAAGCAGTATCAGTAACCCACTGAACAATGGGTTTCCTATGCAGATCAAGATAAAGCGTGGCGATAACA | |||||||||
gi|67488541|gb|DR090198.1|DR090198 RTAL1_13_H04.b1_A029 Roots plus added aluminum Pinus taeda cDNA clone RTAL1_13_H04_A029 3', m CTTGGATTGAAGAGAGCTC EST sequence (targeted fragment marked with yellow): AAAATAATTCAAGTTGGTTACAATTACTAGTACAACGCAAGCGTAGTCTATGGGATCCGCAAGAGGTTTGTTCGATCCAAGGAATTGTCTGGAGGTTGAGCCCGTTTCGGCTTCATGCTAGGATATCTTGCACGACGAAGGTTGTATTATCGGCCGGAGGGTCCTCAGATGGAGGAAAATATTCACCAAACTCCCAGGTGGGGCAGTCCACGCAATCTTCCTCAGCTCTTGCTCTAGGTACGTGCCTGCCAAATTCCCACCAAATGTCCTGGTCCAAAATTCTATTGATCAACTCCTTTACCGGATGCGTCCGGATATCGACACTCCACTTGAGCCTTCCGACAGTATCGTACACGATGCTCGTACCCAAATGACACTTCGTTTCAAGAGCATATCCTGCTTGTGCACATGGAAACAACAACAATGATTTGCAATACAAGTTAGGCATGGGCAGAAATACCCCTTCATTTGATGCAGGTGATGACACAACTTGTACAATGTGTGAGCAATTTGTAGAAGATGCAACAAACTATGTCAGTCAGAACACGACTCAGTCAGAGGTTTTGGCTGTGTTGCACCAGACATGTTCAAAACTCGGTGTTCTCGGTACCGAGTGTATATCAATGGTCGACCACTATGCCCCTATCATTTTCTTAGAGATTGCAACTATCAGTCCGAAGGAGTTTTGTCAGAAGATAAGTGTATGCAGTGATTCGTCATCGCTTGCTCTAAATAAAAAGCAGAATAACTGTGATGTTTGTGAATCTGCAATGGT | |||||||||
gi|49011868|gb|CO200693.1|CO200693 RTCNT2_1_A04.b1_A029 Root control 2 (late) Pinus taeda cDNA clone RTCNT2_1_A04_A029 3', mRNA CTTGGATTGAAGAGAGCTC EST sequence (targeted fragment marked with yellow): TGGAGATTAATTACATTCCAAAATTCACAATTAAACATATTTATACCTAACCACACACATCAGCAGACATACGTTACTTTGGCAATTCCACATCGACCGGGCAATAAAAAAACACACCGAAATCCTCTATCAGCGGGACACATGGTGTGCCACATCAGACTTGAAAAAATTAAAATCTCGGAAATCTTATTTGGCTTTAGCAGGAGCCATTATTCCCTTAATCGACTTGACAATCTTCTTGGCAATCCCTTCATTGCGGATCTCTTCGATCTCTACTCGTCTGACTTGGGGTTTAGGCTTCTTGGGAATCGTCACGGTCAGCACTCCATCAACGCCCATTGCAGCCTTCACAGCATCCACGTCAGCATCCTCGGGCAACCCCAGCCGCCGCACACGCGTCCCAATAGTAGGACGTTCTCGAACGTGCCACGTGGCGCCCTTGTCATCCCCATCCTCGTCCTGCTGCTTCGCGCTGATCTCCATGATCCCACTGTGCGTCTGGAGCTTCACATTTTCTCTCTTCAATCCAGGAAGGTCT | |||||||||
gi|70771019|gb|DR682543.1|DR682543 EST1072618 Normalized pine embryo library, Lib_D Pinus taeda cDNA clone PWAAA59 3' end, mRNA CTTGGATTGAAGAGAGCTC EST sequence (targeted fragment marked with yellow): GATGGGTTGCAACTTTCGCGTGCTCTTCAATTCGAGAAGTGACAATGCAAGCAGGAAAATATGGTACATTGAGATGTTACGGTAGGAAATGTGTGCACGCGTTTTGAAGAAACGCGGAGGAATTTCTGCAACCGCAATTCACAGGAAAAGGAGGATTTGGAATGGGCGCTTTTGGTACATGATGTTGACTTTTTAGTGCTACAGTGGTTCAACATTCTCTGATGTGCTCGCTTGGAAGGATTAAAAGAGATAATAAAACCTACATAATGACAATCTATAGCAACTGGATTTCATTCTTCATATAAAAAGAAAAGTTGAAGCTAAATGTTTGTTTAGAAATTCTTACAGCTCCAGGTGCATACATTCTATTTGTAACTCATGGAGAGGGTCTGATTGATGACTCCATTTTGGAACTCTTGTTAACCAGAACACGGTAGTAAAATTTCCACAGGGAATGTGTCAGTATGATGTGAAGAGGATACAGTGCAGTGTTTTCTCAACTTTTTCAATTCAAATCCCTTAAAACCAAGAAAAGAGGAGCATGGGCGCTTTATGTTGCTGTCCAAGTCCAGAAGACCTGGAAGAGTACAGCTCTTATCCCAATGGATGTATGTATCAACATTGCTTCTGTCTGAGGTGTTGCATGA | |||||||||
gi|74169130|gb|DT639058.1|DT639058 EST1153989 Normalized pine embryo library, Lib_D Pinus taeda cDNA clone PIMHM55 3' end, mRNA CTTGGATTGAAGAGAGCTC EST sequence (targeted fragment marked with yellow): CGGCCGGGGATGGAAACTGCGGATTTGAGGAATCAGAGATCGGATGTGTAGGAGACTCGATCCAGTGTCTCATGTGCAGTAAATGTTTGAATTCTAACCAATTGATCTGTGAGTATTCTGTTGGGTTTGTGGGTTTTCGTTGCAAACGATGGAGAAGGGCTCTCGACTTCTAAATGGGGATGCGGAAAAGACAGAGAACGGCATGGAAGGGGATTCTAAGGGCGGTCAAAGCTCCAAAAAGGAGGGGTTTTTCAGGGCAGACAAGATTGATCTGAAGAATTTAGATGCCCAGTTAGAGAGACATCTGTCGAAGGTATGGACTCTGGAGAAGGAGGCCAACAGACCTAAGGAGGACTGGGAAATCGACCTTAAACAATTGGTTCTCAAGGGTAAGATAGCCCAGGGCGCTTTTGGCAGTGTATACAGAGGAGTCTTGGATGGTCAGGACGTTGCAGTAAAACTGCTCGACTGGGGAGAAGAGCAATCGAAATCAGAAGCTGAAGTAGCTGCATTAAGATCTGCATTTCGTCAAGAAGTGGCTGTATGGCATACACTGGACCATCGCAATGTAACAAAGTTTCTGGGAGCTTCAATGGGTTCCTCAGATCTTAATGTGAATACAAATGGTGCCGAAGGTAGCATTGAAGGTCCACCCAATGCTTGTTGTGTTGTTGTAGAGTATCTTGCCGGAGGAACACTGAAGACCTACCTTATAAAAAATCGAAGAAAAAAACTCGCTTTTGATGTTGTAATCCAGTTAGCTTTGGACCTCTCAAGAGGGTTAAGCTATCTTCAATCAAAGAAGATAGTTCATAGAGATGTTAAAACAGAAAACATGTTGCTGGAC | |||||||||
gi|34349962|gb|CF391545.1|CF391545 RTDR3_9_E04.g1_A022 Loblolly pine roots recovering from drought DR3 Pinus taeda cDNA clone RT CTTGGATTGAAGAGAGCTC EST sequence (targeted fragment marked with yellow): TCTGCCGTTTTCAAGCCACTCGAGCTTTCTTTCAAGCTTCTGCTCGATGGGCGCGCTGGACTATGTATCGAGCTTCTGCGGGGATCGTACTAGACACGTCAAGCAATTACAGTTGCAGACTGTGGTGTTGAGGGTCCGCAATATAGATTGTGACGGCTGTGAGGAGAAAGTGAGGAGGTCAGTCTCGTCCATGAAAGGCGTGCAATCGGTGGATGTGGACAGAAAGGAGCAAAAGTTAACCGTAACTGGATACGTGGAGGTATACAAAGTGCTGCGGAGGGTGAAGCGCACCGGCAAGCCCACAGAGATTTGGCCTTATGTACCTGCCGAAGTGGCATACCATCCCTACGCTGCTGGGGCTTACGACAGCAAGGCTCCTCGCGGCTACGTTCGGGACGTGGACCCGGGTTACATGACGAACCCTAATCGCACAGACGAGCAGTACACTTGCATGTTCAGTGAAGACAATACAAAGGGCTGCACCATCATGTAGATGTACAGTCAAAACTATTTATTGGGGCTGCGGTAGTGGAAGAGGCTCCCAGCTTTTCCTCAACGCCCTCCGTTCTCGGTGACTGGCGGTGTAGGTCAGCTTCTCCATTTTTATGATTATATTTCTGTGACTGGAGTTCTTTTCGATCCAATGGGCTGTTCGTGAA | |||||||||
gi|34353701|gb|CF395284.1|CF395284 RTDS2_10_B04.g1_A021 Drought-stressed loblolly pine roots DS2 Pinus taeda cDNA clone RTDS2_10 CTTGGATTGAAGAGAGCTC EST sequence (targeted fragment marked with yellow): AGAGTACATGCGGGAAGTAACTGTTGTTGATCCAAAATGGTTGGTAGAATTGGCACCAAGGTTCTTCAAGGTAGCTGATCCTACAAAACTAAGCAAGCGCAAGCGGCAGGAGCGCATTGAGCCTCTTTATGACCGTTATCATGAACCCAACTCATGGCGTCTTAGCAAGCGTCGTGCCTGAAGGAATATTATCTATAAAATATGTGTTCTTTTGGAGGCACAATTTGTCTTTCACATACATGCTTCTTGAATGCTGTTCATCTAGATTGCAATCATCAGCTTGGCAAGCATAGATTCATGTTTGAAGATTCTTCTTACATGTCGAATGGAATTTGTCCTCTCTGGAAGTTGTGGGAGTGACAGTGGCATAGCAGCAATGATGTTTAATACATAGTAATATACGCTGCACACGTGAATTATGCAGATTAGGATGGTAGTAGTTCAAGTTACAGAGAGTTGAATCCATGTATAAACAACTTAAATACCCTCTGTTTTTCACCAGGATGCAAAAACTAAAACGTTGTTCCACCATGGAAAGATTTTAGGACGTCTAAATATAGAAGTAGCTGAATTCTATTCAATCCATGGCATATACAAGGAATGGGGAGATTGATCTCATTGTACTCTCGGAATTGCATCAAAATTATAATGGAACTTTAACATGAACAAGGGAGAGCTGGAAGCACATTGGATAGAGTTGGAAGCACATTGGATGTGCAG | |||||||||
gi|51495527|gb|CV032702.1|CV032702 RTNACL1_17_G07.g1_A029 Roots plus added NaCl Pinus taeda cDNA clone RTNACL1_17_G07_A029 5', m CTTGGATTGAAGAGAGCTC EST sequence (targeted fragment marked with yellow): AGTCGGCGCGAAGCATCACAAGACGAGATATTGGGCGAGACCCTGCAACAGATGACAACGAGTTGGATTGCTTGTCAAGAACAAGCAAACTTTGTATTGTTTATTATCATATATCATCTTAACTTCTGATTTGCTAGTTTGTTAAAATTTGTTTTTGCAGGGAGCAGGTTTCAAAATTCTTTTTCATTGCCTTAGAATGTTATAGCATAGTCCTCTCCTATAGGTTCTGTCCCGCTATATGTTTTTGTTTCAGGATTTTGTAACGTCAAGACTAACTCTGTTGGTATTTGTTTCTTTATTGTTTTTTCTTGTGTTTGCCTTCATAGATGTTTTAGCTCTTAATTATTATAGTTTGTGGGAGGAATGACGGTATTTCTATGGAATCAGTAATTTCTATTTTTGGTATTTTAGTTATCAGTTTTGAAAGTTTATCAATACTGGTAGGTTTTGGTGTAATAGTAAATTTTTTCGTGGTATGAGAGCCTGGACCCAGGTTCAAGTTGGATTGCCATAACTGAGTTTGACTGGATATACTTCTATAGAATCCTTAACTTTCAGCATAAAATTCCTAATTACAGTTTTAGAAAGTTCACCAAGATCCTAGTTACACGTTTAGAAAGTTTACCAACACCTGCTAGATTTTACGTTGATGTTACGTTAGATTTCTAATATAAAAGGGAGGAGGTTACGGGGAGCTTTCTTCAGTCCAACGAAAGGCCGTATAGGGATGATTCAACTGCTGGTTCATGGACTCTACTATCTT | |||||||||
gi|67959474|gb|DR162437.1|DR162437 RTFE1_17_F12.g1_A029 Roots minus iron Pinus taeda cDNA clone RTFE1_17_F12_A029 5', mRNA seque CTTGGATTGAAGAGAGCTC EST sequence (targeted fragment marked with yellow): AGGGGATTTTTTCAGTCCAAGTGCAATCATGTACGGGTTCGAGGCCCTCACATTCAATATCCATGGCGGATACCTGGAAGCAATTGTACGAGGGTACCGATCGACTCTGTTGACAGCGGCCGATTACAATAATTTATGCCAGTGCGAGACGCTGGATGACATTAAAATGCATCTTGCCGCCACCGACTACGGTCCCTACCTGCAGAACGAACCTTCGCCATTGCACACATCAACAATCGTGGAGAAATGTACTCTCAAATTGGTGGATGAATACAAGCACCTGCTTTCTCAAGCAACTGAGCCACTATCAACATTTCTTGAATATATAACGTATGGTCATATGATTGATAACGTTGTCCTCATTGTCACCGGCACTCTGCATGAAAGAGATGTCCAGGAATTGCTAGAAAAATGTCATCCTCTGGGCATGTTTGACAGTATTGCAACACTTGCAGTTGCCCAGAATATGCGAGAACTATATAGACTGGTGCTTGTTGACACGCCTTTAGCTCCCTACTTTTCTGAATGTTTTACTTCTGAGGATCTGGATGATATGAATATAGAACTTATGCGGAACACACTCTATAAAGCATTATCT | |||||||||
gi|74161702|gb|DT631633.1|DT631633 EST1146564 Normalized pine embryo library, Lib_D Pinus taeda cDNA clone PIMFA92 3' end, mRNA CTTGGATTGAAGAGAGCTC EST sequence (targeted fragment marked with yellow): CGGCCGGGGGATCTAAATTAAGCAGAATATTGAAATCTGTGGGAAATGTCGTTGGGGAGTCCCGGATTTGAGTTCAGACAGATTTATGGCAACTCTGGTTTTCAGCGATGCGGGGCCTGCTAAGAGTATTGTTTCCATAGAGGAAGGATTCAGCCTGAAATGCTCTGTGGATTCCATTAGAATGCCAGAGGAGGAGAAGACTACAGCAATCAGTGGATTGGATTGTTGTGGGTTGTTGCAGGAGATGGTATGTAGAAACCAGGTCTTGGGCACAGATGAGAAGGAGGAGAAGAATGGAGGGTGTGAAATCAGGTGTGAATTCAGTGGGTCAGAGGGGAAGAGTTGGCAATCAGTATTTGATATAGCTGAGCCTCTGATTGAGCAGGACTTGGCTTCCGAAGCTTGCAGGTATTGTGTGAGCTTTTGTTTGTTTGGGTTTATTGCGATATTTATGGTCCATATCTGTTTCTGGGTGCTCTGGAGCTCAAAGGGACAGTGGATGAGGAAATTCTGTGTGTCAGAGCAGGATTGAGTTCTGCCCTGCGTATAATGGGTGGTGCTGTGGTGGTTTCTTTCTGTACATGGGGTTTCTTGGGAGTGGTTTCGAAGCACAGGAAGAGATGTTCATGTTGGCAAGATATTGAGCTGAGTCGAACCAGGGCAGATGATGCAGACGAGAGAGCTGAGAAAGCCCAATGCTCTAAACAACAATTCATGACCTATGTGTTTCACAATATAAGAGTTCCCTTCAATGCAATAGTTCTTGGATTGGGATATCTGAGAGCTATTGGAAATGTCGAAACGTCCTCGGCTGACGTCAAGGA | |||||||||
gi|74154471|gb|DT625555.1|DT625555 EST1157479 Sequencing ESTs from loblolly pine embryos Pinus taeda cDNA clone PIMA124 5' end, CTTGGATTGAAGAGAGCTC EST sequence (targeted fragment marked with yellow): CAGTGTTTCATGCCCAGGAATTTTATCGAATCCTTTCCGTCTCCCAGTAGGCACCACGTCCACCGACGGCCAGGCCCTCCGTGGACCCTTCTGGGGAATGCATTCAATACAAAATTCAGTTGTTGAGCCCGCGGCCATTTTGCCCTCAGAACGATTTCACCTGCGGCTAGCTCTTCGCGGTCCTCTTTCTTTTTTGCACCGAGATACACGCCAGATTAAATATTGATTTGGGTACCTGGTTTTAAACAATAATTAAATGAGTAAATGCATCTTGGAAAGATCGTCAAAGTTTTCGAACTAGATACATTTACAAATTGACAGCGCGGGCTGAAGATTTCTCATTATAATATTTAGCCGAGATATATGCCCAGAGAAATATGGAGGGACCTGATATGAAAATGGGGTCTAAAATTGGAGCTTCTATTAAACACGCAGATGATGAAACTTCAAATTTCCCAGATGCCAATGAGATTGTCAATGGCCAACATGAGCAAGATCAAACGGAAATTTTACTGAGTGATGCCCCACGACTATCATCTTTGCTAGTGGAAATGAAGGCGGGACTTGATCAAATTAGAAGTAAATTACAGCCACTTGTTCAGCAGGTAAAGGACAACATGTATACAACTAAAGATGGGATAAGCTACCTAGATGCGAAGCATCTCTTGCTTCTGAGTTATTGTCAATCAATTGTCTACTATTTGATTAAGAAAGTAGAGGGTTCTTCAATTCAAGGCCACCCAGTCATTGCCCGGCTTGTTGAAATTAGACTGTTCTTGGAGAAGATTCGGCCAATTGACAAAAAGCTTCAGTACCAAATTGAGAAGCTTTCAAGGGTGGCTAATAATGCTCCTGTCAATAGAATCTCTAGCAAAAGTGAAGAGAGTTTAGGTATGGATAAAGAAGA | |||||||||
gi|70775233|gb|DR686757.1|DR686757 EST1076835 Normalized pine embryo library, Lib_D Pinus taeda cDNA clone PWABJ49 3' end, mRNA CTTGGATTGAAGAGAGCTC EST sequence (targeted fragment marked with yellow): GGGCTCTATTCAATTCAATAGCAATAAGAGGAAGTTGGGTATTGTTTTATCAGAGTCCCATTTACTGTTTTAGGGGCTTTAGGTAAAGTAGTTTGCAAGCTATATATTATTACCTCAGGGTCTCTGGGAGTGTTCAGTATCTGAATAAGTGCTATAGTTGCAGAAATTGGGCTGTTCTTTAATGCCTGCAGAGTTATTTGTGAGCGAATTCTTAATTTGGATGCAGTTTTCTGAATGCCCACATTAGATTTTATCACTGAATCCAATGTGGGCACTCGCAGAAATTTTACTTAAATCACTGCACGGTTGATCAGAGTTTTTGCGGTAGGCTGCGGCAGTGTATGCTGCTATCGTTTTTGTGGGGCGGGCGTCTGCAAGGCGGAGAACTTTTATTTCTATCTAGTCCTTACTTTGGTTTCAGATCAGGGAAATTCAGAGAATTTTCTGCATTTTTTTTTCTTGTGGGTACATCTGTACATATAAACAAGATGCTGCTTGGAAAGCGAGCGAGGCCTACAATGAGAAGAACTACAAGCATGTCATCGCTTGGTTCAGATTCTTGTCTTGAGCTGAATCCCAAAGAGAAGCAGAGACCATCTCAGGATTGCTCCTCAATAAAGGGCATGACCCTAGGAGAGACTGCACAAGGGCAAGCTGTGGCAATGGGTGTACCAATCAAAAAGGGCATTTGGTGGCCATTGAACGGCTTTGCTTTTCCTAGGCCTAATAGAAGAAAGAATTCAGAGCCTGCCCACTTCCTGCATGCGTGTTTTCTCTGCAAACGCCGGCTGGTCCCAGGCAGGGACATCTACATGTACAGGGGTGACAGTGCCTTCTGT | |||||||||
gi|67963175|gb|DR164287.1|DR164287 RTFE1_48_B02.b1_A029 Roots minus iron Pinus taeda cDNA clone RTFE1_48_B02_A029 3', mRNA seque CTTGGATTGAAGAGAGCTC EST sequence (targeted fragment marked with yellow): TTCGGAAGCCTCTTGGTATGACTTCCGAAGCTGCTGCTTCAGCTGTTAGAGCAGCTACAAAGATGCCGACAAGTTTTCGTGGTCTTTCTCAAGGTACCGCAGAAGTTAAGGATAGTGATAAGAAAGGTGGGATGAGTGCTGACGCAGCTGCTGCAATTGTGATGGCTGCTACCAGGGGTTCACGGAGGCCTCAACAGGGATCAGCATCTGAACCTGGAACTTTACGTGGAGGGATTTTACACAAGATACTGAAAGGTATGTCAGAAGAGAGTGATGGGATTGGAAGTGCTGGCGTGAGCCCTAGTCAAGATGGTGATGCATCTCACTTCAATTCAAGCAGCGGTGGTATGCCTTTTCTACAGGCTGGGCAGAATTCTGGAGTCTCTGGTTCTGGTTCAAAATTTGTTCTTGATGGTTGTTTGCCACGTCAGCAGTCTGGAGACATTTCAGGTGCATCTGGATCTATTATGAGGTTGGTTGATCCAAAAACACCGAAAGATGATGCTTCTGTTGCAAAGGTTATGGTAAAAGCTGCAGCCCTTGCTGCAGCTCGTGAAGCAGACTCTTCTGAAGCTTGCCTGTCACGTGAAGAGAAGTTGAAGGCAGAGAGATTAAAAAGAGCAAAAGTGTTTGCTGCTTTGATCAAGAATGGGCAGCACGGTTTAGAGGGTGAAAATGTGGAGTCTACTCCTGAAGGTGCAGTTTCTGTTCAGAATGAATCCGGTAGCAAGGCCACAATATGTGGTAGCTCTTACAATGCTGCTGCATTTCCATCGAATTCTCCGAAAGGGAAAATTTCTGATGTCAGTGCTAGAGGAGAAGATTGTGGGCAGACAGAAGTTGTTGCTGCTT | |||||||||
gi|67189868|gb|DR078315.1|DR078315 RTFEPL1_3_G01.b1_A029 Roots plus added iron Pinus taeda cDNA clone RTFEPL1_3_G01_A029 3', mRN CTTGGATTGAAGAGAGCTC EST sequence (targeted fragment marked with yellow): CAACAATTCACTATTCACTATTGTCGAAATTAAATATACAATCAAATATTATACAAAATTGACAGGATAAAAGCCTGTTAATCACGCTATTCATGATGGATGTTCATATATGTATTTCACAATATAGATAGATCGATCATGAAATGTATATATACATCAATTTGACGTTATATCTACGCTGTCAGATGTATATGAACAGGAATCTAACTAATGGTATATGTACACAACCAAACGCCTACGCAACTCTCCAACCGCGTATTGCATTAATATTCTGTAACTACTCTGTGCTTATTGCCCGCCATGAATAGCTATCAGTGTATATAATAAAAGTACAACAGCAGGGTCCGCCATGTACAATGCTATATAAGAGTTAGATACTTGTAGGTAAATGAACCAGTAGCCGGGAGTTTCGAACGATCTGGACAAATAAATCACACTTCATAGTTAGGAAAGTACAATGGAAAATTTTCAATGTCATGAATTCTAAGAGAAAAACAATTTACTAATTTCAATATAGAGTCAGTAGGAATGATCCAAACACATGAGAGATTGAACATAAGCAGAATCTGTTAAGCTGAAATGTGAAAAGTATCATATAAAAAAACATAATGTTAACCCGGCTAAACAAAAGGAAACAGCAAAACCTAATTTCAGAAAAATGTATGCTACATAAGGGAGCTCCCTTCAATCCAAGGAAAAGACATTTCCTGGACAAAATCAGCTCCCGCATCATTCACACATCAACCCATTTGTTTCGTTTGTGGGTAAAAAGTGAGTTTGTGAAT | |||||||||
gi|57881766|gb|CX646937.1|CX646937 COLD1_12_A09.g1_A029 Root cold Pinus taeda cDNA clone COLD1_12_A09_A029 5', mRNA sequence CTTGGATTGAAGAGAGCTC EST sequence (targeted fragment marked with yellow): TCGAGCTTTCTTTCAGCTTCTGCTCGATGGGTGCGCTGGACTATGTATCGAGCTTCTGCGGGGATCGTACTAGACACGTCAAGCAATTACAGTTGCAGACTGTGGTGTTGAGGGTCCGCAATATAGATTGTGACGGCTGTGAGGAGAAAGTGAGGAGGTCAGTCTCGTCCATGAAAGGCGTGCAATCGGTGGATGTGGACAGAAAGGAGCAAAAGTTAACCGTAACTGGATACGTGGAGGTATACAAAGTGCTGCGGAGGGTGAAGCGCACCGGCAAGCCCACAGAGATTTGGCCTTATGTACCTGCCGAAGTGGCATACCATCCCTACGCTGCTGGGGCTTACGACAGCAAGGCTCCTCGCGGCTACGTTCGGGACGTGGACCCGGGTTACATGACGAACCCTAATCGCACAGACGAGCAGTACACTTGCATGTTCAGTGAAGACAATACAAAGGGCTGCACCATCATGTAGATGTACAGTCAAAACTATTTATTGGGGCTGCGGTAGTGGAAGAGGCTCCCAGCTTTTTCTCAACGCCCTCCGTTCTCGGTGACTGGCGGTGTAGGTCGGCTTCTCCATTTTTATAATTATATTTCTGTGACTGGAGTTCTTTTCGATCCAATGGGTTGTTCGTGAACAAGGGTTCCGCCATGCAAAAATTATCAAATGAGAAGAGAGGCCATAAGCTAAACAACGCGAACAAATAGTGATCGTGTTGAGCTTCCTTGCCCTATTCCTTTATCTGTCATGTCATCATCCATACATTTTGTAATATGACCCTTAGCGTTCTGTCAAAAAAGACGCGTATTCTCATGAATAACCGTGTAAAGTATAATGATTTTTGCCATCATATATGTACCCA | |||||||||
gi|10681681|gb|BE996832.1|BE996832 NXCI_101_H10_F NXCI (Nsf Xylem Compression wood Inclined) Pinus taeda cDNA clone NXCI_101_H10 CTTGGATTGAAGAGAGCTC EST sequence (targeted fragment marked with yellow): ACAGAGAGTTGAATCCATGNNNNAACAACTTAAATANNCTCTGTTTTTCANNAGGATGCAAAAACTAAAACGTTGTTCCACCATGGAAAGATTTTAGGACGTCTAAATATAGAAGTAGCTGAACTCTATTCAATCCATGGCATATACAAGGAATGGGGAGATTGATCTCATTGTACTCTCGGAATTGCATCAAAATTATAATGGAACTTTAACATGAACAAGGGAGAGCTGGAAGCACATT | |||||||||
gi|57885823|gb|CX650994.1|CX650994 COLD1_49_A06.g1_A029 Root cold Pinus taeda cDNA clone COLD1_49_A06_A029 5', mRNA sequence CTTGGATTGAAGAGAGCTC EST sequence (targeted fragment marked with yellow): AGATGCCGACAGTTTTCGTGGTCTTTCTCAGGTACCGCAGAAGTTAAGGATAGTGATAAGAAAGGTGGGATGAGTGCTGACGCAGCTGCTGCAATTGTGATGGCTGCTACCAGGGGTTCACGGAGGCCTCAACAGGGATCAGCATCTGAACCTGGAACTTTACGTGGAGGGATTTTACACAAGATACTGAAAGGTATGTCAGAAGAGAGTGATGGGATTGGAAGTGCTGGCGTGAGTCCTAGTCAAGATGGTGATGCATCTCACTTCAATTCAAGCAGCGGTGGTATGCCTTTTCTACAGGCTGGGCAGAATTCTGGAGTCTCTGGTTCTGGTTCAAAATTTGTTCTTGATGGTTGTTTGCCACGTCAGCAGTCTGGAGACATTTCAGGTGCATCTGGATCTATTATGAGGTTGGTTGATCCAAAAACACCGAAAGATGATGCTTCTGTTGCAAAGGTTATGGTAAAAGCTGCAGCCCTTGCTGCAGCTCGTGAAGCAGACTCTTCTGAAGCTTGCCTGTCACGTGAAGAGAAGTTGAAGGCAGAGAGATTAAAA | |||||||||
gi|30357247|gb|CD018597.1|CD018597 NXLV_039_B10_F NXLV (Nsf Xylem Late wood Vertical) Pinus taeda cDNA clone NXLV_039_B10 5', mR CTTGGATTGAAGAGAGCTC EST sequence (targeted fragment marked with yellow): CGGCCATTATGGCCGGGGGCTCTATTCAATTCAATAACAATAAGAGGAAGTTGGGTATTGTTTTATCAGAGTCCCATTTACTGTTTTAGGGGCTTTANNTAAAGTAGTTTGCAAGCTATATATTATTACCTCAGGGTCTCTGGGAGTGTTCAGTATCTGAATAAGTGNNNTAGTTGC | |||||||||
gi|68085712|gb|DR179201.1|DR179201 RTMNUT1_16_D09.g1_A029 Roots minus micronutrients Pinus taeda cDNA clone RTMNUT1_16_D09_A029 CTTGGATTGAAGAGAGCTC EST sequence (targeted fragment marked with yellow): TTACCATATCAACCACATTTTAGTTGACATCACATTGACATGTTAGCATAACTTTGCGTGCAAAACTGATATTTTGATGAAATTTATATCATTGAAAAGCTCTCAACAAGCAAAAGCCAATGACGATGTCAAAAAAAGATAAAAGAAGATTTGGTATGTTAAGGGTGCTGAATTCATCCAGCATAAAAAAACCAATTTAAGTAAAGACAAATCAAGACTTCACCTCACACCTCAAATGCCTCAAATGGAGATTAATTACATTCCAAAATTCACAATTAAAGATATTTATACCTAACCACACACATCAGCAGACATACGTTACTTTGGCAATTCCACATCGACCGGGCCATAAAAAAACACACCGAAATCCTCTATCAGCGGGACACATGGTGTGCCACATCAGACTTGAAAAAATTAAAATCTCAGAAATCTTATTTGGCTTTAGCAGGAGCCATTATTCCCTTAATCGACTTGACAATCTTCTTGGCAATCCCTTCATTGCGGATCTCTTCGATCTCTACTCGTCTGACTTGGGGTTTAGGCTTCTTGGGAATCGTCACGGTCAGCACTCCATCAACGCCCATTGCAGCCTTCACAGCATCCACGTCAGCATCCTCGGGCAACCCCAGCCGCCGCACACGCGTCCCAATAATAGGACGTTCTCGAACGTGCCACGTGGCGCCCTTGTCATCCCCATCCTCGTCCTGCTGCTTCGCGCTGATCTCCATGATCCCACTGTGCGTCTGGAGCTTCACATTTTCTCTCTTCAATCCAGGAAGGTCTGCCTTAATAA | |||||||||
gi|74166333|gb|DT636263.1|DT636263 EST1151194 Normalized pine embryo library, Lib_D Pinus taeda cDNA clone PIMGP79 3' end, mRNA CTTGGATTGAAGAGAGCTC EST sequence (targeted fragment marked with yellow): CGGCCGGGGGCATGGCTTTGGGCTAATTAAGGATGGTTGCATGCACAAATGTGATGGGTTGCAACTTTCGCGTGCTCTTCAATTCGAGAAGTGACAATGCAAGCAGGAAAATATGGTACATTGAGATGTTACGGTGGGAAATGTGTGCACGCGTTTTGAAGAAACGCGGAGGAATTTCTGCAACCGCAATTCACAGGAAAAGGAGGATTTGGAATGGGCGCTTTTGGTACATGATGTTGACTTTTTAGTGCTACAGTGGTTCAACATTCTCTGATGTGCTCACTTGGAAGGATTAAAAGAGATAATAAAACCTACATAATGACAATCTATAGCAACTGGATTTCATTCTTCATATAAAAAGAAAAGTTGAAGCTAAATGTTTGTTTAGAAATTCTTACAGCTCCAGGTGCATACATTCTATTTGTAACTCATGGAGAGGGTCTGATTGATGACTCCATTTTGGAACTCTTGTTAACCAGAACACGGTAGTAAAATTTCCACAGGGAATGTGTCAGTATGATGTGAAGAGGATACAGTGCAGTGTTTTCTCAACTTTTTCAATTCAAATCCCTTAAAACCAAGAAAAGAGGAGCATGGGCGCTTTATGTTGCTGTCCAAGTCCAGAAGACCTGGAAGAGTACAGCTCTTATCCCAATGGATGTATGTATCAACATTGCTTCTGTCTGATGTGTTGCATGAACCGAATTCTCAGCATGTATGCTGTAATCTTTTATAGAGTTGATGGGCATGGTGGTACTTCATCTTCTGCATCAGCTGGATTATTAGGCATCACTTCCCCTGACAGCTCCCACCTGATACCTTTCGTCCCC | |||||||||
gi|66689252|gb|DR011746.1|DR011746 HEAT1_7_D07.g1_A029 Root at 37 C for 24 hr Pinus taeda cDNA clone HEAT1_7_D07_A029 5', mRNA s CTTGGATTGAAGAGAGCTC EST sequence (targeted fragment marked with yellow): AATGGATAAGTACTTCATTGCAAATAAACTAATGAACCTTTCTTACATCATTAGATGCCTTCCCAAAAACTAATTTCATAACTTCTGATAAATAATATAACAAGTGAAGGATAACCCAATAATCTTTGGTTGACTGTTAATCAATGAACTACACTTGAGATGATTCTTTTACATCATATAGTTTTGGATATCCGGAAAGATCAAAAATAACCGCGTTCCATCATTATTCCTTCGGTGTGAAAACACGGTTGTGACAAGTGGAATCACATGGGTATGGACAGTCAGTTTCCTTAACAACAGCTTTACCAAAGTACCAATTTCCTACTGCCTCTGCAATGCTCAATCCATTTAATCTTGGAGAGTCATCTTCAAGCCAAGTCTCCTGCATTTCAAATTGACAATGTGCATAGCATGAGTTGATGAACATGCCTCCTGATGCAAAACTCTGAAATACTTTCAATGCGTTAAGCATTTCAATCCTGAAACCTTGCATTGTTTCCAACTGGCTTGGACTGCATTTCTTTATATCTAGCTTGC | |||||||||
gi|74161654|gb|DT631585.1|DT631585 EST1146516 Normalized pine embryo library, Lib_D Pinus taeda cDNA clone PIMFA39 3' end, mRNA CTTGGATTGAAGAGAGCTC EST sequence (targeted fragment marked with yellow): CGGCCGGGCTGCTTGCGTCCTGGAGATGTTATTCATAAACTTAAGCTGCAGGTGCTGGATGCTTATGAAAATCCTGTTGAGAAAGGACAGAAAATAAAGGTGGAATTGACAGGATTAGAGCTCCAAGACCAGGAGTTCCAAGACCAGGATGACCCATATCGAGAGTATCGGGAGGTGGATGATCAAGGTTGGATAAACTTTGGAGGGCTTCTAAAAGTTACGGGAAATTATGGTTCAAAAGGTTGCATTCGTGTGTCCTCAGATACAAAAATGTTGCTTAACAAAGAGTTTGACCTTCTATCAAGGGAGCTCAAAGTTGTATCCGGGATTCCAGAGCATTCTTATGCTGGTTCTATTCTAAAGAATGTTGTGTTTGGAATCTTTGACGACGAAGGGAATCTTGATTCCAAAATGGATGGTTTCCAGCATACATTGACAGTTGATTTGTGTAGTCTGAGTTCTGTTCAATACAAATTCAGTCAGGGAAAGTGTACGGTGCCCAAAATTATGCTTCCAGAAGATGTTAGACTGTTGCAATTTAAAGCTTTCCATTCCTGGCATACCGAGCTCTTTGTGCATATTAAGGTTGATATTCTTCCAAATCCACGGCTGGAGATTGTTAGTGTTCCGGATCAAACTTTTGATGATGGAGCAATCTGTCATGCTTACGATGAGAGCACAGCAAGTCAGTCACAAATAAGTAATCAAACTATGGTGAATGAAGTTAGATTGTACATTGAGACTTTTATGAGTGAGATGACGAAATGGGAGAATGATTTGAAGCAACTTGGGACCAAAGTTAAAAGGCGTGAGGATGAACTGAGGAAATTAGAAACCAATTTAAGTGAAGTGAATAGTTCTCTGAGTGATTTGGAAAGAGAGCTCAACAAATGTACCTTTTCTTCAAAAGTGATGGGAAGGCAAATTCAAATCC | |||||||||
gi|21787588|gb|BQ655262.1|BQ655262 NXRV092_A12_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA clone NXRV092_A12 5' simil CTTGGATTGAAGAGAGCTC EST sequence (targeted fragment marked with yellow): GTTTCATGCCCAGGAATTTTATCGAATCCTTTCCGTCTCCCAGTAGGCACCACGTCCACCGACGGCCAGGCCCTCCGTGGACCCTTCTGGGGAATGCATTCAATACAAAATTCAGTTGTTGAGCCCGCGGCCATTTTGCCCTCAGAACGATTTCACCTGCGGCTAGCTCTTCGCGGTCCTCTTTCTTTTTTGCACCGAGATACACGCCAGAGAAATATGGAGGGACCTGATATGAAAATGGGGTCTAAAATTGGAGCTTCTATTAAACACGCAGATGATGAAACTTCAAATTTCCCAGATGCCAATGAGATTGTCAATGGCCAACATGAGCAAGATCAAACGGAAATTTTACTGAGTGATGCCCCACGACTATCATCTTTGCTAGTGGAAATGAAGGCGGGACTTGATCAAATTAGAAGTAAATTACAGCCACTTGTTCAGCAGGTAAAGGACAACATGTATACAACTAAAGATGGGATAAGCTACCTAGATGCGAAGCATCTCTTGCTTCTGAGTTATTGTCAATCAATTGTCTACTATTTGATTATGAAAGTAGAGGGTTCTTCAATTCAAGGCCACCCAGTCATTGCCCGGCTTGTTGAAATTNNACTNNNCNTGGAGAANNTNNNNNNNTTGACAAAAAGCTTCAGTANNNNNNNGAGAAGCNNNAANGGGT | |||||||||
gi|34356912|gb|CF398495.1|CF398495 RTDS3_15_D09.b1_A022 Drought-stressed loblolly pine roots DS3 Pinus taeda cDNA clone RTDS3_15 CTTGGATTGAAGAGAGCTC EST sequence (targeted fragment marked with yellow): GAAGCAAACAGTTTTATAACTGAAGTATCTACTCTTTTTATTGATAGCGTTTTTTTCCTCACAAAAAAAAAGTGAATAGCTTGCGCCATATGAATAACTCAGACTACATTGTTCATAGGATCATATGAGCTTTCATTTTCAGAGACTAAAGTCGGACGCACCGGTGAAGAAGTCGTAACGCCCATCGCTTCTTGTAGAGTTCTCTCTGACACTTCGGCGCGTGGAAGAATCTCTGGAATTGAATCTGTGCTCTCGATTACCGCGTGGATCCCGTTGTTTGATTCGTTGACCTGAGAAATTGCAGCTGCACATTCTGGCTTCTTGTTTCGATTAAGGAGATTCAGAGAATGTCTACACATTGGGCATGAAGAACGCGAGGTGAGCCACTTATCAATGCATTCCATGTGGAAAGCATGATTACATTTGGGCAACACCCGCACCTTTTCTCCTTCCCCAAATTCGGCCAAGCAGATGGGGCAATCAGTGCCCAAGCCCGGTGGAAGCTTAGAGGGAGATGTGTAAACAACAATAGGCAATGCTTTCATGGCCGCTTTCTTCAATCCAATGTCGGCGAACTGGATAACGACGGCATCGGATGGGTTGCCCGCCATTCGTCTGCTGTAGCAACGTACGCATTTG | |||||||||
gi|68024790|gb|DR166040.1|DR166040 RTPHOS1_9_A01.b2_A029 Roots minus phosphorous Pinus taeda cDNA clone RTPHOS1_9_A01_A029 3', m CTTGGATTGAAGAGAGCTC EST sequence (targeted fragment marked with yellow): AAATTTAAAATGGATAAGTACTTCATTGCAAATAAACTAATGAACCTTTCTTACATCATTAGATGCCTTCCCAGAGACTAATTTCATAACTTCTGATAAATAATATAACAAGTGAAGGATAACCAAATAATCTTTGGTTGACTGTTAATCAATGAACTACACTTGAGATGATTCTTTTACATCATATAATTTTGGATATCCGGAAAGATCAGAGATAACCGCGTTTCATCATTATTCCTTCGGTGTGAAAACACGGTTGTGACAAGTGGAATCACATGGGTATGGACAGTCAGTTTCCTTAACAACAGCTTTACCAAAGTACCAATTTCCTACTGCCTCTGCAATGCTCAATCCATTTAATCTTGGAGAGTCATCTTCAAGCCAAGTCTCCTGCATTTCAGATTGACAATGTGCATAGCATGAGTTGATGAACATGCCTCCTGATGCAGAGCTCTGAAATACTTTCAATGCATTAAGCATTTCAATCCTGAAACCTTGCATTGTTTCCAACTGGCTTGGACTACATTTCTTTATATCTAGCTTGCAGTTGTGCCAAAGACCATGAGGGTCTGCTACACCTGGTGCCACACTGTTCTTAATCTGCCATGAATCATATCCCGCATTCAATAAAAATAGTGGTGTCTGTATGTAGGGCAACAAGTACTGT | |||||||||
gi|74163747|gb|DT633678.1|DT633678 EST1148609 Normalized pine embryo library, Lib_D Pinus taeda cDNA clone PIMFX52 3' end, mRNA CTTGGATTGAAGAGAGCTC EST sequence (targeted fragment marked with yellow): CGGCCGGGGGGCTCTATTCAATTCAATAGCAATAAGAGGAAGTTGGGTATTGTTTTATCAGAGTCCCATTTACTGTTTTAGGGGCTTTAGGTAAAGTAGTTTGCAAGCTATATATTATTACCTCAGGGTCTCTGGGAGTGTTCAGTATCTGAATAAGTGCTATAGTTGCAGAAATTGGGCTGTTCTTTAATGCCTGCAGAGTTATTTGTGAGCGAATTCTTAATTTGGATGCAGTTTTCTGAATGCCCACATTAGATTTTATCACTGAATCCAATGTGGGCACTCGCAGAAATTTTACTTAAATCACTGCACGGTTGATCAGAGTTTTTGCGGTAGGCTGCGGCAGTGTATGCTGCTATCGTTTTTGTGGGGCGGGCGTCTGCAAGGCGGAGAACTTTTATTTCTATCTAGTCCTTACTTTGGTTTCAGATCAGGGAAATTCAGAGAATTTTCTGCATTTTTTTTTCTTGTGGGTACATCTGTACATATAAACAAGATGCTGCTTGGAAAGCGAGCGAGGCCTACAATGAGAAGAACTACAAGCATGTCATCGCTTGGTTCAGATTCTTGTCTTGAGCTGAATCCCAAAGAGAAGCAGAGACCATCTCAGGATTGCTCCTCAATAAAGGGCATGACCCTAGGAGAGACTGCACAAGGGCAAGCTGTGGCAATGGGTGTACCAATCAAAAAGGGCATTTGGTGGCCATTGAACGGCTTTGCTTTTCCTAGGCCTAATAGAAGAAAGAATTCAGAGCCTGCCCACTTCCTGCATGCGTGTTTTCTCTGCAAACGCCGGCTGGTCCCAGGCAGGACATCTACATGTACAG | |||||||||
gi|34361388|gb|CF402971.1|CF402971 RTWW1_24_C11.b1_A015 Well-watered loblolly pine roots WW1 Pinus taeda cDNA clone RTWW1_24_C11 CTTGGATTGAAGAGAGCTC EST sequence (targeted fragment marked with yellow): CAACGCTGGAACCCTTATCACTACCATTAAACAACATAGGAATTCATTCAATATAGGAAGGGCGACAGACAGTCTGAAGCTATCGGACTTCTCTTCAATTTAATCACCAGCTAAATTACTGAATCTATATATATATTCACGACAGAGCAGTTAAGGTTCGTTCCGGATCTCAATCGAATCCCTCGGGACGGACCGAAAGCCAACCGGCCTCAGCGGAGTTTAAAGGAAACCATTAAAACTATAACTTCAAATAAATTAAGAAAAACTATAACAGAATACATTGTGCAGTCGGGTTGAGCACCCAGAAACACTATAAAAACACACAGCCAAACTGTATATCGAGGTAACCTCTTATGGAAATCTGAAAACTACTTATACGACAAAGGATTGGCCGAGCTTCACTCAAGGCCAGCAAAACCTCTCATCGGCGAAATGATCAAACGCTTAACTGCTTTCAACAGAAAACAAAAACGAAGTAAATTCCCCTTTCTCAATGCCCTTGGAGGGTTTCATGGCAGACCAACCTCGGAGGGAAGACATTCCTCGCGCATTATGGTTCGGCTGGAAGGAACGAGGTAGCAACCGAAGCAGCACCTGTGTGCTCGC | |||||||||
gi|49009754|gb|CO198579.1|CO198579 GEO1_14_F12.g1_A029 Root gravitropism April 2003 test Pinus taeda cDNA clone GEO1_14_F12_A029 CTTGGATTGAAGAGAGCTC EST sequence (targeted fragment marked with yellow): TCTTGGGAATGTAGCAATTGCTTTCTTCAATCAAAGTGGTCGTGCTCTTCCCCACGGCACCTGCCCCGGAGTCGGCATCGCAGGCCATGCTCTCCACGGCGGTTATGGCTATGCTTCTCGAAAATGGGGCATAACTCTCGACCACATCATCGGTCTAGACGTTGTTCTTGCCAACGGTACTCAAATCTACGCAGACAATACTACCTACCCCGATATCTTCTACACCATGCGAGGAGCAGGAGACAGCTTCGGAATTGTGACTTATTTCTATATGGCAACAGAAGAAGCTCCTTCTTCAGTTGTGTATTTCACCGCTGGGCTTGCAAGCTCCCTGTCCAATGTCGACGTCGTCACAGCCGGATTTGAGAATCTCCAAAACTTCTCCCTAAACTCAGAACTCATGTCCGATNAACCTTACTTTTGGGATGTATACCGACTCTAGCGGATCATTCAGTCTAAGCGGGTGGTGCATGTCCTGCGACATCACCCAATTCAACAGCACTGTCTTCCCCACAATGCTCCAAGGCTTCATCTACAGCAGCACCACCGTCGAAAGCCAAGACTGGATCACCGCGCTCACCAATCTCGCCTCTCCAGAACCACTCGAACAACCTCTTGGAAGCGCATACACTCTATACGATACCTTCTATGCGAAATCTCTGGTATCGAAAAATGCTGAGCCCCTGACTGCAGACGCCATCCAAAGTTTCTGGTCCTACATAATTGCTAATCAAGGGCAAAGTCCATTCTACAGTATCATAAATTTGTACGGTGGTCTCTACTCCGCTATCAACA | |||||||||
gi|48937172|gb|CO166631.1|CO166631 FLD1_63_H07.b1_A029 Root flooded Pinus taeda cDNA clone FLD1_63_H07_A029 3', mRNA sequence CTTGGATTGAAGAGAGCTC EST sequence (targeted fragment marked with yellow): TGTTGGAGCTCCCTTCAGTCCAACCAAAGCTTGTGCAGCGGTGGTTCAGCTGCTGATTCATGCATTCTACTTCCCTGTCCGTGACTCTCCAGCAGCCTGAACAAATCAATCAATCGACCTGCATGACAGGATAGTGGTGTGCATGACGCAGGAGATGTACTGTCACTAAACACGCATTTCTTGGATTGAAGGGAGCTCCACTTATCCTCATCATCTCTTTCTGCAACTTGTTTATGGAATTTGTTTTGTTTTTAACCTATTTCATCTCTAACAATTTTCTCTTCTCTATTTGTTTTGGGCTTGCTAACAACTGTTATGTGCCCTAAGCCCTGCATGTCAGTGTTCCAATTTTTATTATAGCTGAATCTTTGTTCGAGTCAAATAAGACTTAGGTTTAACTTGATTGATCTGCATCGCTATAGTTTCAGGTTTTGTATATTCTGGTTGTTCACTATGATCTAGTTAGAGTTCGATCGAAAAGAATGGCAAATCTAATGATTATTTGTTGAGTGGCTGATTGTGGTACGTTTCGTTCTGTGCAAGAGTTTGGCCGGTCGCTTTTACATGGTTATGAATTATATTGTTATTTCATTTTAATTCCGATCTGTCGCTGAACGATTGATCTATAGTTGATTGTAACCAGGTTATGTATGAACTGGCCAGAGTGATTGAAAAAGTTTCATTTGTTACAAATAAAATACGATACCAATAATTAATGCTTCAGTGATATGAAATGGTTTGATCCATCTTATTGATTTTTTTTTGCAAAGTTTTATTCTATTACAGAAATAGAATTGTGATT | |||||||||
gi|48932495|gb|CO161954.1|CO161954 FLD1_32_F02.b1_A029 Root flooded Pinus taeda cDNA clone FLD1_32_F02_A029 3', mRNA sequence CTTGGATTGAAGAGAGCTC EST sequence (targeted fragment marked with yellow): TTCTTTTGACTCGAACAAGATTCAGCTATAATAAAAATTGGAACACTGACATGCAGGGCTTAGGGCACATAACAGTTGTTAGCAAGCCCAAAACAAATAGAGAAGAGAAAATTGTTAGAGATGAAATAGGTTAAAAGCAAAACAAATTCCATAAACAAGTTGCAGAAAGAGATGATGAGGATAAGTGGAGCTCCCTTCAATCCAAGAAATGCGTGTTTAGTGACAGTACATCTCCTGCGTCATGCACACCACTATCCTGTCATGCAGGTCGATTGATTGATTTGTTCAGGCTGCTGGAGAGTCACGGACAGGGAAGTAGAATGCATGAATCAGCAGCTGAACCACCGCTGCACAAGCTTTGGTTGGACTGAAGGGAGCTCCAACACATCCAAACCTTATTCTTTCTCCAAAAACTATTCA | |||||||||
gi|48948466|gb|CO175594.1|CO175594 NDL1_55_F02.g1_A029 Needles control Pinus taeda cDNA clone NDL1_55_F02_A029 5', mRNA sequence CTTGGATTGAAGAGAGCTC EST sequence (targeted fragment marked with yellow): TCATGTTATTCTTCGGTATTGTTGTCTTAGCTCTCTTCAATCCCATCCTTACATGGAAGATCGCTGATATTTTCGATGGAAACTGTGATAAGCAAATCGAAAAAGAGCAACCCTTCTGTTTAGCTCTTCAACGAAACGATATCCAACGAACCTACGCTTCATGGACCACTTACGATCAATCTACCCGATTATCTGGATCAAACCACGTTGATTTGTCCAAGAAATGTACTCCAGTTATGTTCTACTTGGTCAGTCGACATGCCGCTCGATACCCAAGTGCCGCCGACATGGCTGAGATGGCTGAAGTTCTTCCCAGACTTCAATCTGAATTAGCTGACTCTTACGATCGACGATTAGATGAATTGTGTTCACACGATTTCTCAGCTATCCGAGACTGGAAATTCAAGATGAACCCCGCAGAAGCTGGTCACCTTTCCCCAAGTGGAGTCAAAGCTACCAAAAATATGGCTCGATTATTCCACTACCAATACCCAACTCTTTTCAACGCCAGAACCGTTGACTTCCAAGTTTCCGTTGCTAACCGAAACCGAACCTTCGAGACTGCTAACGCTTTCATCGATGGAATCAAAGACAACCAACCTCAAATCTCTGAGAAGATCAAGATCCAAACCCGAGACCATCTTGAATTCAACAAGATCTGTTTGAAGAAGATCGGTATCCGAGAGCCTGTA | |||||||||
gi|34361364|gb|CF402947.1|CF402947 RTWW1_24_E10.b1_A015 Well-watered loblolly pine roots WW1 Pinus taeda cDNA clone RTWW1_24_E10 CTTGGATTGAAGAGAGCTC EST sequence (targeted fragment marked with yellow): GGGTGAAAAATTCTAACAAATTGCTTACATAACACGATACAAAAGCAGTTCATATCAGATTGGATTATGAACCCAGGGTTGTGTTACTGCTATGTTACTGCAAGAGGTTTTCTCGTCTTTAATACTATCATCCAAGCTTCAATGCTTGTAGTAAATTCTGAGATGCTCCCTTCAATCCAAGTTTTCCTTGGTCTGGAACTTCTGATTGACCCAGCTTGCCTTTGTCCAAGGACTAAGCAAGATTGTTATTTCCTGATCCAGATCTGGGGATTAGTAGTTTCTTCTTCCACCAAATATTGTTGTATCACATCTTGTTGTTTGGATGGGGTGCCCCTGATTTCTTCTTGTTCTATTTTTGGCTCATCCATGGGCAGGTCTGAGCCATCTAGCTCAACATCACTAATCACATGATGTTCTACTTTGGTACCAACGGAGCAGGTGGATTATGTTGGTAATTCTCAAGTCTATTTCTGTCAGAAAATCTTTGCTGGAGTCCATACCCACACAGTTTGAGCATTCGAGCATATGCAGTGAATCGTGATATTGTGGTTTTTAGTTTCCTCACTTCTGCTGTGGTGATATTGTGGTTCTTAGTTTCCTCACTTCTGCAATAGAAAAAACAGTTCATGTCAGATTGGATTATGAACC | |||||||||
gi|5044010|gb|AI725158.1|AI725158 1057 PtIFG2 Pinus taeda cDNA clone 9057r, mRNA sequence CTTGGATTGAAGAGAGCTC EST sequence (targeted fragment marked with yellow): GTTTTATCCAGAAATCTTCTACTCCGTATCCGTCGATTTCTCGCATTTCCTTCGCACAGAACTGCCACAGATTGACTGCAAGGAGTTTGAAGCGTTCAATTGTTTGAAATATTATTTAATTCTCTGTACACTCGGAGAAGTTTGGACGCAAGAAAACATGATTTCTAAGCAACGGAGTTCTGTATGGTCTGCAATGTCTCCCTCTACTCAGCCCTTCTTGAAAATTTCGGTTACTGATCCTGTCAAGATGGGCACTGGGAGTCCAAGCTTATGTGTCATATCGTGTTATTACTAAGACAAACATGCCTGAATATCGAAGTCCAGAAAAAATTGTTATTAGGCGATACATGATTTTGTCTNGTTGCATGAACGANTGGCAGAAAAAAACAAGGGGATTTTTATTCCCCTCCTCCCCAAAAAAATGCTGTTTAAAAATTTCCCCTTCCCTTCNAAATTTTTTTAACTTAAAGCGTCCAAGATTGGATTTCTTTTTAATCCAATTGTTCCCCTCCCCACTTCAACTTTTTTAAAATTTAAACNTTCTTTNCNGGCCGAAAAAAAAAGCNTTNGNACCAATTTTNNTNTTTTGGAACCCCCNNCTTTTNNAAAAAANCCNNTTNANTTTTTTTNNNNTTTTTT | |||||||||