| mature miRNA: CTTGGATTGAAGGGAGCTCCT species: Sorghum bicolor database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|34445168|gb|CF432467.1|CF432467 NIT1_17_C05.b1_A002 Nitrogen-deficient seedlings Sorghum bicolor cDNA clone NIT1_17_C05_A002 CTTGGATTGAAGGGAGCTCCT EST sequence (targeted fragment marked with yellow): GGGGGACCAACAAAACTTCATGCGAAAGAAAAGCATCCACTACTTTGGTAACAGTTGTCAAGTACTACAATCATTACAAGGGATCCAGCATGCTTGGGGTGAAGGCAAGATTGACACAGAAGGATTCCCCTTTAGTCCAAGACCTTAAAAAGATTTCTTCAAACTGCAGGGGGAAGCTGTTCAAACTGCAGCTTGCCAGCTTCATGGAAGCTGATCTTGCTGCTCTTCAATCTGCCATATTGAAAAAGTTGTAAACTGCGGGATCTCAGTTTGATGTTATTGTGTCTGGCTCAGTCCTTATAGCAAAGTGGTAGCATCAAACTTCTCTTCCACCAATTTATGTTCTGCATGACATACAGAACAAATATAATTGTCAAGAAGGGGACCTGAACATCACCCATTAAGTGGGAAAAGAAATGCTCTGGATGTAACAACCCTAAACAAGACTGTGCGGAAAATCTCAAGGGGCAAAAATGCATTATGTTG | |||||||||
gi|37708329|gb|CF759104.1|CF759104 DSAF1_41_B03.b1_A011 Drought-stressed after flowering Sorghum bicolor cDNA clone DSAF1_41_B03 CTTGGATTGAAGGGAGCTCCT EST sequence (targeted fragment marked with yellow): CTCAGTTGCCAGGGCGTACTGACAATGAAATTAAAAATTACTGGAACACTCGAATAAAGAGATGTCAACGAGCTAGCCTTCCTATCTATCCTGCAAGTGTATGCAATCAATCTTCAAATGAAGATCAGCAAGTGTCTGGTGATTATAATGGTGGCGAGAACATATCCAATGATCTTCTATCCGGGAACAGCCTTTATCTACCAGATTTTACCAGTGACAATTTCATTGCTAATCCAGAGGCTTTATCATATGCACCACAGCTGTCAGCTGTTTCAATAAGCAATTTACTCGGCCAAAGCTTTGCATCAAAAAACTGTAGCTTCATGGATCAGGTAGACCAAGCAGGGATGCTGAAACAATCTAGCTGTGTGCTTCCTGCATTGAGCGATGCCATTGACGGTGTGCTTTCTTCAGTTGATCAATTTTCAAATGACTCTGAGAAGCTCAAGCAAGCTTTAGGTTTTGATTATCTTAATGAAGCCAATGCTAGCAGCAAGAGTATTGCACCTTTCGGGGTTGCACTTACTGGCAGCCATGCCTTTCTAAATGGCAACTTCTCTGCTTCTAGGCCCACAAATGGTCCTTTGAAGATGGAGCTCCCTTCACTCCAAGATACTGAATCTGATCCAAATAGCTGGCTCAAGT | |||||||||