miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse




mature miRNA: GAACCGGGACTAAAGATCGGT
species: Oryza sativa
database: miRNEST
The numbers on the right side of the alignments show a score calculated for them.
When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5.

Predicted miRNA targets
gi|117229377|gb|CT859787.1|CT859787 CT859787 Oryza sativa (indica cultivar-group) cv. Guang Lu Ai 4 Oryza sativa Indica Group cD

GAACCGGGACTAAAGATCGGT
.| |||||||||||||||| |
TTAGGCCCTGATTTCTAGCGA

EST sequence (targeted fragment marked with yellow):
GTAGGCCTTCCAGGCCAGTCGAGACGACGCGACCTGCGAGTGGAGCATCAAGAAATCGAACGTCAGTTACAAGAGATGCAGCAACTGGAACGCGAGCGTCAGCAACTGGAGCAACAAGAAATCGAACGTCAGTTACCCTCGCGTCAGCAACTGGAGCAACAAGAAATCAAACGTCAGTTACAAGACATGGAACGCGAGCGTCAGCTACACCGGTGGAGAAACTTTGTAACCGGTGGAGAAACTTTGTAACCCCCCTTTAGTCCCGGTTTCCAAACCGGGACTACCAATCCGGGACTAAAGATCGCTATCTTTAGTCCCGGGTGAAATAACCGGGACTAAAGATAGCGATCTTTAGTCCCGGATTGGTAGTCCCGGTTTGGAAACCGGGACTAAAGGGGGGTTACAAAGTTTCTCCACCGGTTACAAAGTTTCTCCACCGGTGTAGCTGACGCTCGCGTTCCATGTCTTGTAACTGACGTTTGATTTCTTGTTGCTCCAGTTGCTGACGCGAGGGTAACTGACGTTCGATTTCTTGTTGCTCCAGTTGCTGACGCTCGCGTTCCAGTTGCTGCATCTCTTGTAACTGACGTTCGATTTCTTGATGCTCCACTCGCAGGTCGCGTCGTCTCGACTGGCCTGGAAGGCCTAC



gi|112785732|gb|EE591303.1|EE591303 NEW_RNG129-A06-M13F Rice mixture of leaf, root, panicle Oryza sativa Japonica Group cDNA, mR

GAACCGGGACTAAAGATCGGT
|||| |||||||||||||. .
CTTGACCCTGATTTCTAGTAG

EST sequence (targeted fragment marked with yellow):
TGAATTTGGAGTTGGAGAGACTGACCAACAGGCAGCCAGAGCCGGGTTTCTCGCAATGGAACCCTATTGAGCATCCAGGAGAAACGATGGACAGCGACGATGAAGATAATGATTTAGGTCGTGAGTTTGAGGGTTTTATCAGGAGGCATCGACGGGCATCAACTCTACGACGCGTGCTTGACAGCATCCATGATGACCTTGCAGATGACCAAGAAAGGGACAGTTCCATTCTGATCAACGCCTTCAACCAAGCCCTCGCTCTGCAAGGCTCAGTGCTTGATCCTGATGAGGGCCAAGGTGACCAAGGCGGTTCAACAAATGATGATGGCTTACTGGAGGAGTATGTCCTCGGAGCAGGTCTGAGCCTGCTGCTTCAACATTTGGCTGAGAGCGACCCAAGTCGGAATGGTACCCCTCCTGCAAAGAAAGAGGCGGTTGAAGCGCTGCCCACTGTGAAAATCGAAGAGGTTGTCAGCTGTTCAGTCTGCCTGGATGATCTTTAGTCCCAGTTCATCC



gi|88555731|gb|CI486009.1|CI486009 CI486009 Oryza sativa (japonica cultivar-group) 15 days after pollination pistil Oryza sativa

GAACCGGGACTAAAGATCGGT
.| |||||||||||||||| |
TTAGGCCCTGATTTCTAGCGA

EST sequence (targeted fragment marked with yellow):
CGGGAGAAAATACATAGATTAACACTAGCCATTAGCAAATCAACAACAAAATAATAATAAAAAAAATCTCGAGGAACTGTCGCTTCCCCTCTTTAGTCCCGGTTGGTAGATTCCCTCTCTTTACTCCCGGTTGGTGTTACCAACCGGGACTATTATTTGAACCGGGACTAAAGATAGCGATCTTTAGTCCCGGATTCGTAGTCCCGGTTGGAAAACCGGGACTAAAGGGGGGTTATCAACCGGGACTACAAACGGTTTCTCCACCAGTGTGAGATGCACACGATAGTATGCATCATACACTTGTTATTTGACTATACAAGTAATTGAAATTCGATCAACAACAACCATAAGGAAAGAGTTGAAAGTTGGCGGGTGCCATGTTGCACACATATGGCAGTTGCAT



gi|89190167|gb|CI392217.1|CI392217 CI392217 Oryza sativa (japonica cultivar-group) seed Oryza sativa Japonica Group cDNA clone J

GAACCGGGACTAAAGATCGGT
.||||||.||||||||| |.|
TTTGGCCTTGATTTCTA-CTA

EST sequence (targeted fragment marked with yellow):
AAAAATCATCTTTAGTTCCGGTTTATATTCAAACTGGGATTATTGTGGATTTTGTCCAACCCAACAAAAATGGTTTCTCCAGTAGTGCTTAAAATAAAAATCCCCAGGAGTTACATGGATGCTCATACATATGATCCTAGTCTTCTCGGCTACAGATATTCATAAGGGTTTTCCCTTCTCAGCTCACTCTTCCGTCGCAGGGATCCAGCAGCCATGGAAGCCGTAGGGCAATCCGTAGGGGAACCTGACGCGCGCCACTCTCCTCAAACGTGGTCGCGTCTACACCAGTGCGTACCCTTCGGCATCGTCGGAGCTTACAATAGATATCACCATGTCATCGTCTTCGTCGGTGGCTCCCGGCCTCGCGACGAAGAAAGGCTGGAGGGCCCGGAGCCCTCCTGTGCAGCTCTTG



gi|88724251|gb|CI747510.1|CI747510 CI747510 Oryza sativa (japonica cultivar-group) library (Kikuchi S) Oryza sativa Japonica Gro

GAACCGGGACTAAAGATCGGT
||||||.|||||||||||. .
CTTGGCTCTGATTTCTAGTAG

EST sequence (targeted fragment marked with yellow):
TAAATTATTTTATACCAAATGCTTACAAGAGACAGCAAAAACAGTTTAAATCTATATTTCTAATCACTGGTGGAGAAACCAATCTTTGGTCGGTCGGCCGAAATCCACAATAGTCCCGATTCCACTAAAAACCGGGACTAAAGATGATCTTTAGTCCTGGTTGGTGGCTACAGTGGGCATATTTGATCTTTAGTCCCGGTTGGCACCAACCGGGACTAAAGATGATCTTTAGTCTCGGTTCTAAACCTGTTAGTCCTTGTCAGGCCCCCAACTTTACTCCCGGTTGGTGTTATAAACCTGGACTAAAGATCTAGAAGATTTTTAATCCCAGTTGGTATTACCAACCGGGACTAAAATTCAANGCTTA



gi|66929560|gb|CX116408.1|CX116408 EI104D17 A normalized whole-life-cycle cDNA library of rice Oryza sativa Indica Group cDNA cl

GAACCGGGACTAAAGATCGGT
|||||.|||||||||| |.|
GTTGGCTCTGATTTCTACCTA

EST sequence (targeted fragment marked with yellow):
AAACAACTGTCTCAAAATCAGTTAATTAGTAGCTTAGATAGCAAAGATCATCGGAGGATCGGCGATGGCGGCGGCGCTCAGGACCACCGGCGGCCGGCGGCTGGCGGCGGTGCTCGTCATGATGCTGTTCGTCTTGGCGGCAGCGCTGCTGGAGGCGCCAGCGATGGCCTCCGCCGCGAGGGTGTTGCTTCAAAGTGGACAGCTTCCGACTCCGTATCCGACCTGCAATCCAGGCCAATATCCATGCCCATCGCGTACTACTGTGCCATGATTCACTGGTGGAGAAATCGTTTGTAGTCCCGGTTCGTAATCCCCCTTTAGTCCCGGTTGTCTAATCGGGACTACGAATCCGAGACTAAAAATAGCGATTTTTAGTCCCGTGTGAAATAACCGGGACTAAAGATCGATTTTTAGTCCCGGTTGGTAACACGAACCGGGACTAAAGATCGGTCAGCCACGTGGCTGGCTGATCCATCTTTAGTCTCGGTTGGTGTTACCAACGGGACTAAAGATCTATGTACCATTTTTTTTTATTTGCATTGCCATGTTTGCTGCATGGTTGATTATACACACCATATATATATATATATATATATATATATATATATATATATATATATATATATACATACATATATACATATATACCTATATATATATACCTATATATATGCGCATGTTATATGTCACACAACAATTTACCCGCTTTTCATGTTAAAGGCTCAACTTAATGACACATTTGTTGCCAAATATTAAACCAAGAGAAGAGCCCAATAAAAGAATTATAACGCACATAACAAACGAGACCACATGGAGGCGAAAAAGAACTAAGAGACTG



gi|88724795|gb|CI748054.1|CI748054 CI748054 Oryza sativa (japonica cultivar-group) library (Kikuchi S) Oryza sativa Japonica Gro

GAACCGGGACTAAAGATCGGT
|||||||||||||||||..
GTTGGCCCTGATTTCTAGTTT

EST sequence (targeted fragment marked with yellow):
GTTAAAAAGGGTAACGGACATATTTGATCTTTACTCGGGCATATTTGATCTTTAGTCCCGGTTGGTAACACCAACCGGGACTAAAGATCATCTTCAGCCCCGGTTTTCATTGCAACCAGGACTATTGTGGAATTCGGCCGACCGACCAAAGATGGTCTCTCCACCAGTGGTTATGATTCTCCTGTCTGGAAAGAAAATATAAAAAAGATTATACGAAGGTTCAAAAAAAACTCGTTATTAATCCGATGCTAGATAAACCTTAGGTCAGTGTCCCGTATACGAAGAGGGTGAAATGCGATGAGCCTCATCAATTTTATGCCTACAAGAATAATGCATGTGTATGTGCA



gi|86493142|gb|CI135775.1|CI135775 CI135775 Oryza sativa (japonica cultivar-group) mixed callus (Normalized Library) Oryza sativ

GAACCGGGACTAAAGATCGGT
||||||||||||||||| .|
ATTGGCCCTGATTTCTAGGTA

EST sequence (targeted fragment marked with yellow):
CCCAACCAGGACTAAAGATGGATCTTTAGTCCCGGTTATTTCATCCAGGACTAAAGATAGCGATCTTTAGTCCCGGATTGCTACTCCCGGTTGGAAAACCGGGACTAAAGGGGTTACCAACCGAGAGGAAATATGGTTTCTCTACCAGTAATACAATGTTACCTATCATTTGCATGCGACTTAAATAGTTATAAAAAAATTAAAAAACTTTAGTAGCATCGATTGTGATGATATAAGTCTATACGCAAATATGCATGACTAAATTTGATCTACAATTAGAGAAAAAAATAATAAAATTAAATAGTGAAAAGTACCCTTACAACGCAGATAAAATTTGTTATTTTGGTTACTTCATATGTTGATCGAATTTGGACTTGCATGTTTGTATAGTGTCTTATATCTTTATAATCTATCTTATCAAATTTTATAAAATTTTTATATAACTGTTTAAATTACATGCCTACACCTATGTGTAAAATATACTTACCCGTAATAAGGTTTTGCTCTATTTTCAGTTACTTGATCAAGTTCGTCCATTTTTTTGCTTTAAAAGACCCAGCACAACAGTACATGCTAATTA



gi|88835882|gb|CI370987.1|CI370987 CI370987 Oryza sativa (japonica cultivar-group) callus Oryza sativa Japonica Group cDNA clone

GAACCGGGACTAAAGATCGGT
||||||.||||||||| | |
ATTGGCCTTGATTTCTAACAA

EST sequence (targeted fragment marked with yellow):
AAAAACAATCTTTAGTTCCGGTTATTTTTGGATCCGGGACTATTATGGATTTTGCCGGACCGAACAAAGATGGTTTCTCCACCAGTGGAGTTATATAATTTTAATTGTACATAGTAATCACATTTTAATTGTACATAGTACTCACGGTTGGCAACGCACGCGCGTTTGTAATTCAAGTCCTATAAAACAACACATTTCATCCTAACAGAAAGGAACTTTACAGATGGTACAAAGTAATATGACCGTCGGAAGTTATCATGTACCCAAGATTCACTAGTTTGCTATTGCAGGCTTACATGAAGTTATCATATTACCCCTTATAAAGTTTATGAACCTTAGGGGCATATTAAAACATTTTAGTGGTCCCCAAGTACATTTGATGCTAACTGGTGAGAGCAGTTGACGTGGTTCCCATAACACTTTTCTAAAATATATGCTTTGCTGGATGGTACTTCCCT



gi|112786169|gb|EE592203.1|EE592203 FU_RCC01a-1-G01.seq Rice mixture of leaf, root, panicle Oryza sativa Japonica Group cDNA, mR

GAACCGGGACTAAAGATCGGT
.|||||||||||||||| |||
TTTGGCCCTGATTTCTACCCA

EST sequence (targeted fragment marked with yellow):
CCCCCCCCCTGTTATACAAGATGTCCTTAACAATGGGCAGCACATTGAGGTACCAGCAGAGTTCAAGTCAAGCCTTAACACTTACCTCGCCAGACTTATCCTACTCCCCTGTTCGTTCACTTGCGGAAATAATTGCTTTCAACGATGCACATCCTATTGAGGAGAGACTAAAGGATTTTGGGCAGCTCATCTTCCTGGTAGCTGAGAACACTACTGGCATCGGCGCACTCGAGAGAGCCATAATCCATCAACTAAACAAGCTTTCAGCTGACGGACTGGAGAAGCTAATGAAGGATGAGCAGCTGGATGCAATTATCACGCCCAATGACTCAGTTTCCACCGTTCTCGCCATTGGCGGCATGCCGGCAATCACCGTACCAGCTGGATACGGTAAGAGGGGAGTCCCCTTCGGAATTTGCTTTGGTGGATTGAAGGGCTATGAGCCGAGGCTAATTGAGATGGCTTATGCATTTGAGCAAGCTACCAAGGTCAGAAAACCCCCTAAGTTCTTGCGTGGAACATTTTAGCAAGATGGCAGACATGTCTTTAACTAGTAAAGCCAATAATTCACTGGGCTGATCGTTTATCCACTGCTGGGGAACCCATCTTTAGTCCCGGTTTATACCTCTTTTCGTATAATCCGGGACTAAACATATCCATTTTTAATACCGGTTGGTAATTAACACCAACCGGTACTAAAGATGCCACGGTAACACCAACCAGTAGTAGTAAAGATGGTAGCATCTGCCATGTGGCATCAGGTGGTACCATCTTTAGTACCGTGGCATCATGGCTTGGCATCAGAGAAAGGTCCCTAAGTAATTCTTGCATGGAACATTTTAGCAAGATGATAGACATGTTTTTAACTAGTAAAGCAAGGATGATTCAGTGAGCTGATCGTTTATCGCAACGAAAAAAGGTTAAGAAAAAAA



gi|88225355|gb|CI225271.1|CI225271 CI225271 Oryza sativa (japonica cultivar-group) mixed callus (Normalized Library) and mixed s

GAACCGGGACTAAAGATCGGT
.||||||.||||||||| |.|
TTTGGCCTTGATTTCTA-CTA

EST sequence (targeted fragment marked with yellow):
AAAAATCATCTTTAGTTCCGGTTTATATTCAAACTGGGATTATTGTGGATTTTGTCCAACCCAACAAAAATGGTTTCTCCAGTAGTGCTTAAAATAAAAATCCCCACGAGTTACATGGATGCTCATACATATGATCCTAGTCTTCTCGGCTACAGATATTCATACGGGTTTTTCCTTCTCAGTCACTCTTCCGTCGCAGGGATCCAGCAGCCATGGAAGCCGTAGGGCAATCCCGTAGGGGAACCTGACGCGCGCAATCTCCTCAAACGTGGTCGCGTCTAGCACCAGTGCGTACCCTTCGCCATCGTCGGAGCTTACAATAGATATCACCACTCCATCGTCTTCGTCGGTGGCTCCCGGCCTCGCGACGAAGAAAGGCTCGGACGGCACGGAGCCCTCCTCGTGCCAGCTCTTGGCCTTCTTCTCCACCAGGTCGATCTTGGTGAGCGTGTTGGGGAAGTTGCACGGGCGACGCGCGCCGCACGCGTAGGCATACTGGTACTTCCTGCCGAGGCGCGCCGGGTTGATGCTGCACATGTTCATCCCCCGCCCGTGCTACTCCGGGGT



gi|66927267|gb|CX114115.1|CX114115 EI085N23 A normalized whole-life-cycle cDNA library of rice Oryza sativa Indica Group cDNA cl

GAACCGGGACTAAAGATCGGT
|||| |||||||||||||. .
CTTGACCCTGATTTCTAGTAG

EST sequence (targeted fragment marked with yellow):
TAGTGATTAGTATTACTGGGTAAAGCATTACTCTTTTTTTTTTTTTGTTCATACACCACCCTCCAAAGTTTTATCTACATCCAACATGTGGAATGTGACATTTTGAAATTAATTTCACGTTCATTTTTATCCAAAAGGACACATATTTTGAATAATAACGCATGTGCTACTAGTCGTAGACGTGGAATGCACAATACATAATAATTAAATATTCAAAATTTATGAGCCAATATTACGTATTAACAAATAGATCTCTTCCAGGCACTACACATAGAAAATATTGAAAACACTGGTGGAGAAACCATCTTTGGTCGGTCGGCCGAAATCCACAATAGTCCCGGTTCCACTAAAAACCGGGACTAAAGATGATCTTTAGTCCCAGTTCTAAAGGTTAGAGCTACTTTTTGATCTTTAGTCTGGGTTGGTAACATCAATCGAGACTAAAGATCATTTTTAGTCTTGGTTTAAAAGACGGCAGGTGGTGTCAGACTCCTCCTTTATCTTTAGTCACGGTTGGTGTTACCAACCGGGAAAAAAGATCGACATGCACGGTGCGAGATCGAGAGGACCGAGGCGCACGGGAGGATCAGTTAATAAGTTCCGACCTTTATCTCCTCCTCTCCGAACTCACCCCATCTCTTCCTCTTCCTCCTCTCCACACTCACTCCCATCTCTTCCTCTTCCTCCTCTCATCTCTTCCTCTGATCCGTCTCCTTCCCTCTNCCTCCCAATTCTCAATCTCCTCTGGATCCAACCCTCCCGTCTCCACCCGAATTCTCAAGAAGCGGCGGCCGG



gi|29638159|gb|CB643168.1|CB643168 OSJNEb03L11.r OSJNEb Oryza sativa Japonica Group cDNA clone OSJNEb03L11 3', mRNA sequence

GAACCGGGACTAAAGATCGGT
|||||||||||||.|| |.|
GTTGGCCCTGATTTTTATCTA

EST sequence (targeted fragment marked with yellow):
TAAATCTATAGTTTTCTTAAACAAGCTTTTAAATATGTAGTTTTGTGATAGATCGTACAAACTATATGTAGTTTTATGAAATTTACTCTTTTTTTTATCTTTAGTCTCGGTTGGGGTTAAAAGATCTTTATTTCAGCAATCGAGACTAAAGATCTATTTTTAGTCCCGGTTGGTAACATCAACCGAAACAAAAGATCGGCATGCGCGGCGAAGAGTACAAGGCATGTGCAAGATCGAGGAGGAGACGGGTGGCCTTATCTCTTCCTCTCTAACCTTATCTCTTCCTCTTCCTTCTCTCCTTTTAACTCCTCTCCTCCTTTCCCTCCCCCATCATCCCCCCTATGATGGATGAGCCGGGCGGCCGGGCAGCGCGGAGGGCCGGGCGGCCGGAGGCCTCGCGGCGGCGGGCGGCGTGGGAGCAGGCTTTTTTTTCTTTTTTTTAGAATTTATGATTCGGATCTGTGTATTTGATTTGTGTGTGATGTGAATATGTGATGTATTGTGATGAATTTTGTAGAAGTTGTGATGTAATTTTTTTTAAGATTTTTGAAGTTTTTAAAGGGCCCGATTTGGGG



gi|88694009|gb|CI738047.1|CI738047 CI738047 Oryza sativa (japonica cultivar-group) library (Kikuchi S) Oryza sativa Japonica Gro

GAACCGGGACTAAAGATCGGT
.| |||||||||||||||| |
TTAGGCCCTGATTTCTAGCGA

EST sequence (targeted fragment marked with yellow):
GGTGGATTTGGGATGTTAATTTGATTTGGGATTTGGGGATATGCATGCCACTTAATTCGGGAGAAAATAAAAAAGAAAAAAAAGAAAGATGACCATCTGTACTGCTGTTATTCCCTCTTTAGTCTCGGTTGGTAGACCTTATCTTTAGTTCCGGTTGGAGTTACCAACCGGGACTAAAGATCGATCTTTTGTCCCGGTTATTTCACCCGGGACTAAAGATAGCGATCTTTAGTCCCGGATTCGTAGTCCCGGTTGTCCGGGGTTACGAACCGGGACTAAAAAGCATTTCTCCACCAGTGATGGAAAAGTTAAAGTTCGGAGAACTGGGCCAAGCAGCATATGGAGGCGTCGTC



gi|88661734|gb|CI458939.1|CI458939 CI458939 Oryza sativa (japonica cultivar-group) 4.5 leaf-stage leaf Oryza sativa Japonica Gro

GAACCGGGACTAAAGATCGGT
|| ||||||||||.|||..|
ATTAGCCCTGATTTTTAGTTA

EST sequence (targeted fragment marked with yellow):
GGGATGTGAATCTGTGATGAATTTTTTTAGAACCCTGTGATGTAATTTTTTTAAGAGTTTGTGATGTATTTGGAGATGATTTGTTTGAGGATTTGAGGATTTGGAGATGTTCTGTGGTATGTGATGATTTGGATATGGGAGGGGACGGTGTGAAATCAATATTCAATATTAAAAGCAGAAAAAAAAAAGAAAAAAAATATCTTTACTCCCGGTTGGTGGCTCCATCTTTAGTCCCGGTTGGTAAAGATTGATTTTTAGTCCCGATTATTTGAACCGGGACTAAAGATAGCGATCTTTAGTCCCGGATTCGTAGTCCCGGTTGAAAAACCGAGACTACAGGGAGGTTACGAACCGCGACTAAAAAGCATTTCTCCACCAGTGTCAGAACGTGGTCCATGTTAAAT



gi|88282179|gb|CI403575.1|CI403575 CI403575 Oryza sativa (japonica cultivar-group) leaf of seedling 50ppm CuSO4 for 3 days Oryza

GAACCGGGACTAAAGATCGGT
.||||||.||||||||| |.|
TTTGGCCTTGATTTCTA-CTA

EST sequence (targeted fragment marked with yellow):
ATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAAAAATCATCTTTAGTTCCGGTTTATATTCAAACTGGGATTATTGTGGATTTCGTCCAACCCAACAAAAATGGTTTCTCCAGTAGTGCTTAAAATAAAAATCCCCACGAGTTACATGGATGCTCATACATATGATCCTACTNTTCTCGGCTACAGATATTCATACGGGTTTTTCCTTCTCAGTCACTCTTCCGTCGCAGGGATCCAGCAGCCATGGAAGCCGTAGGGGAATCCGTAGGGGAACCTGACGCGCGCAATCTCCTCAAACGTGGTCGCGTTTAGCACCAGTGNGTACCCTTCGCCATCGTCGGAGCTTACAATAAATATCACCACTCCTGCATGCAGAGATNAACCCGCATACCTGACGATGCCTTGTTACCTACGGAGTAACAAATCCAG



gi|117229377|gb|CT859787.1|CT859787 CT859787 Oryza sativa (indica cultivar-group) cv. Guang Lu Ai 4 Oryza sativa Indica Group cD

GAACCGGGACTAAAGATCGGT
.|||||||||||||| |||
TTTGGCCCTGATTTCCCCCCA

EST sequence (targeted fragment marked with yellow):
GTAGGCCTTCCAGGCCAGTCGAGACGACGCGACCTGCGAGTGGAGCATCAAGAAATCGAACGTCAGTTACAAGAGATGCAGCAACTGGAACGCGAGCGTCAGCAACTGGAGCAACAAGAAATCGAACGTCAGTTACCCTCGCGTCAGCAACTGGAGCAACAAGAAATCAAACGTCAGTTACAAGACATGGAACGCGAGCGTCAGCTACACCGGTGGAGAAACTTTGTAACCGGTGGAGAAACTTTGTAACCCCCCTTTAGTCCCGGTTTCCAAACCGGGACTACCAATCCGGGACTAAAGATCGCTATCTTTAGTCCCGGGTGAAATAACCGGGACTAAAGATAGCGATCTTTAGTCCCGGATTGGTAGTCCCGGTTTGGAAACCGGGACTAAAGGGGGGTTACAAAGTTTCTCCACCGGTTACAAAGTTTCTCCACCGGTGTAGCTGACGCTCGCGTTCCATGTCTTGTAACTGACGTTTGATTTCTTGTTGCTCCAGTTGCTGACGCGAGGGTAACTGACGTTCGATTTCTTGTTGCTCCAGTTGCTGACGCTCGCGTTCCAGTTGCTGCATCTCTTGTAACTGACGTTCGATTTCTTGATGCTCCACTCGCAGGTCGCGTCGTCTCGACTGGCCTGGAAGGCCTAC



gi|58656711|gb|CK045391.1|CK045391 42857siceh_0522.z1 Oryza sativa cv. PA64s panicle ferile cDNA library Oryza sativa Indica Gro

GAACCGGGACTAAAGATCGGT
||||||||||||||||| |
GTTGGCCCTGATTTCTAGGGA

EST sequence (targeted fragment marked with yellow):
TATAGTCCCGGTTTCCTAACGGGACTACAATCTAGGACTAAAGATAGCTATCTTTAGTCCCGGGCGAAATAACCGGGAGTAAAGATCTATCTTTAGTCCCAGTTGATAACATCAACCGGGACTAAAGAGAGGGATCTTTAGTCCCGGTTGGTGTTACCAACCAGGACTAAAGAGAGGATAGGGACAATCCCGGATGGTCCTTTTTTTTGTTACTTTTTTATTTTCTTCCGAATCGGATGGCATGCACATCCCAAATCAAACCACAAATCCCAAATAAAGTAACATCTCAAATCCACATCACAAATCCCAAATCCACATCACAAATCTTAAAATTACTTATACACACAAATCTAAAACATCACAAATCCTAAAAAATTTACGCACAAATCAAATACATCACAGATTATACATCTCAAATCCATACAATGAATCACAAAATTACATCTAAGTGAATCACAAAATATCAAAAAAAAAAGAGATGGTCGTCTGCGCCGCACGCCT



gi|86498997|gb|CI141630.1|CI141630 CI141630 Oryza sativa (japonica cultivar-group) mixed shoot (Normalized Library) Oryza sativa

GAACCGGGACTAAAGATCGGT
||||||||||||||||| .|
ATTGGCCCTGATTTCTAGGTA

EST sequence (targeted fragment marked with yellow):
GTTGGTGTCACCAACCAGGACTAAAGATGGATCTTTAGTCCCGGTTATTTCATCCAGGACTAAAGATAGCGATCTTTAGTCCCGGATTGCTACTCCCGGTTGGAAAACCGGGACTAAAGGGGTTACCAACCGAGAGGAAATATGGTTTCTCTACCAGTAATACAATGTTACCTATCATTTGCATGCGACTTAAATAGTTATAAAAAAATTAAAAAACTTTAGTAGCATCGATTGTGATGATATAAGTCTATACGCAAATATGCATGACTAAATTTGATCTACAATTAGAGAAAAAAATAATAAAATTAAATAGTGAAAAGTACCCTTACAACGCAGATAAAATTTGTTATTTTGGTTACTTCATATGTTGATCGAATTTGGACTTGCATGTTTGTATAGTGTCTTATATCTTTATAATCTATCTTATCAAATTTTATAAAATTTTTATATAACTGTTTAAATTACATGCCTACACCTATGTGTAAAATATACTTACCCGTAATAAGGTTTCGCTCTATTTTCAGTTACTTGATCAAGTTCGTCCATTTTTTTGCTTTAAAAGAACCAGCACAACAGTACATGCTAATTAAACACCTTCATTAGTACGTACAGCGC



gi|88730993|gb|CI754606.1|CI754606 CI754606 Oryza sativa (japonica cultivar-group) library (Kikuchi S) Oryza sativa Japonica Gro

GAACCGGGACTAAAGATCGGT
||||||||||||||||| .|
GTTGGCCCTGATTTCTAGATA

EST sequence (targeted fragment marked with yellow):
GTTAAAAATGAGAGGAGGAGATAAGGTTGAGGAGGAGAGAGGAGTTAAAGGAGAGGAGGAGGTACCTCGATCCGATCGTGCACACCTCTCCGATCTCCGCGTCGATCTTTACTCCCGGTTGGTTTTACAACCGGGACTATAAATAGATCTTTAGTCCCGGTTGGTGTTCCAACCGGGAGTAAAGCGTATGGCGATCTTTTTTCCCGGTTGATGTTATCAATCAGGACTACAAATAGATCTTTAGTCCCGGTTGGTAACACCAACCGGTACTAAAGATTGAAAAGTATCCTGTAGCTTTTAAACCGGGACTAAAGATATTTTTAGTCCTGGTTTTTAATACAACCGGGACTATTGTAAAATCTGGTCGACCGACCAA



gi|117252131|gb|CT844316.1|CT844316 CT844316 Oryza sativa (indica cultivar-group) cv. Guang Lu Ai 4 Oryza sativa Indica Group cD

GAACCGGGACTAAAGATCGGT
|| ||||||||||||||| |
GTTTGCCCTGATTTCTAGCGA

EST sequence (targeted fragment marked with yellow):
TTATTTTTATCAATGTTGTAGCTTAGACTAGAGGTAACACAATATTTTCAACATTTAACCGGGTAAGCTTGCAAAAGGTTTCTGCTTACACGGGTGGAGAAGTGCTTTTTAGTCCCGGTTTGTAACCCCCCTTTAATCTTGGTTGTCCAACCGGGACTACGAATCCGGGACTAAAAATAGCGATCTTTAGTCCCGTTTGGAGTTACCAACCGGGACTAAAGAGGGAATAACAGCAGTACAGATGGTCCTCTTTCCTTTTTTTTTCTTTTTTATTTTCTCCCGAATCAAGTGGCATGCATATCCCTAAATCCCAAATCAAATTAACATCCCAAATCCACATCACAAATATTTAAGTTACTTATACACATAAATCAAATACATCGCAAATCCTAAAAAAAAATTACACAAATCAAATTACATCACAAGTTCTACAAAATTCATCGCAAATACATCACAAGTTCACATCGCACACAAATCAAATACATCACAGAATCATGCAATAAATCACAAATTCTAAAAAAAAAAAAAAAAAAAAGGCCAGCTTGGCCTCGAGGGGGGGCCCGGTAC



gi|88724251|gb|CI747510.1|CI747510 CI747510 Oryza sativa (japonica cultivar-group) library (Kikuchi S) Oryza sativa Japonica Gro

GAACCGGGACTAAAGATCGGT
|||||||||||||||||..
GTTGGCCCTGATTTCTAGTTT

EST sequence (targeted fragment marked with yellow):
TAAATTATTTTATACCAAATGCTTACAAGAGACAGCAAAAACAGTTTAAATCTATATTTCTAATCACTGGTGGAGAAACCAATCTTTGGTCGGTCGGCCGAAATCCACAATAGTCCCGATTCCACTAAAAACCGGGACTAAAGATGATCTTTAGTCCTGGTTGGTGGCTACAGTGGGCATATTTGATCTTTAGTCCCGGTTGGCACCAACCGGGACTAAAGATGATCTTTAGTCTCGGTTCTAAACCTGTTAGTCCTTGTCAGGCCCCCAACTTTACTCCCGGTTGGTGTTATAAACCTGGACTAAAGATCTAGAAGATTTTTAATCCCAGTTGGTATTACCAACCGGGACTAAAATTCAANGCTTA



gi|117252131|gb|CT844316.1|CT844316 CT844316 Oryza sativa (indica cultivar-group) cv. Guang Lu Ai 4 Oryza sativa Indica Group cD

GAACCGGGACTAAAGATCGGT
.|||||||||||||.| |. |
TTTGGCCCTGATTTTTCGTGA

EST sequence (targeted fragment marked with yellow):
TTATTTTTATCAATGTTGTAGCTTAGACTAGAGGTAACACAATATTTTCAACATTTAACCGGGTAAGCTTGCAAAAGGTTTCTGCTTACACGGGTGGAGAAGTGCTTTTTAGTCCCGGTTTGTAACCCCCCTTTAATCTTGGTTGTCCAACCGGGACTACGAATCCGGGACTAAAAATAGCGATCTTTAGTCCCGTTTGGAGTTACCAACCGGGACTAAAGAGGGAATAACAGCAGTACAGATGGTCCTCTTTCCTTTTTTTTTCTTTTTTATTTTCTCCCGAATCAAGTGGCATGCATATCCCTAAATCCCAAATCAAATTAACATCCCAAATCCACATCACAAATATTTAAGTTACTTATACACATAAATCAAATACATCGCAAATCCTAAAAAAAAATTACACAAATCAAATTACATCACAAGTTCTACAAAATTCATCGCAAATACATCACAAGTTCACATCGCACACAAATCAAATACATCACAGAATCATGCAATAAATCACAAATTCTAAAAAAAAAAAAAAAAAAAAGGCCAGCTTGGCCTCGAGGGGGGGCCCGGTAC



gi|88661734|gb|CI458939.1|CI458939 CI458939 Oryza sativa (japonica cultivar-group) 4.5 leaf-stage leaf Oryza sativa Japonica Gro

GAACCGGGACTAAAGATCGGT
.| |||||||||||||||| |
TTAGGCCCTGATTTCTAGCGA

EST sequence (targeted fragment marked with yellow):
GGGATGTGAATCTGTGATGAATTTTTTTAGAACCCTGTGATGTAATTTTTTTAAGAGTTTGTGATGTATTTGGAGATGATTTGTTTGAGGATTTGAGGATTTGGAGATGTTCTGTGGTATGTGATGATTTGGATATGGGAGGGGACGGTGTGAAATCAATATTCAATATTAAAAGCAGAAAAAAAAAAGAAAAAAAATATCTTTACTCCCGGTTGGTGGCTCCATCTTTAGTCCCGGTTGGTAAAGATTGATTTTTAGTCCCGATTATTTGAACCGGGACTAAAGATAGCGATCTTTAGTCCCGGATTCGTAGTCCCGGTTGAAAAACCGAGACTACAGGGAGGTTACGAACCGCGACTAAAAAGCATTTCTCCACCAGTGTCAGAACGTGGTCCATGTTAAAT



gi|89161954|gb|CI102302.1|CI102302 CI102302 Oryza sativa (japonica cultivar-group) Panicles one day after flowering Oryza sativa

GAACCGGGACTAAAGATCGGT
|||||||||||||||| .|
ATTGGCCCTGATTTCTACATA

EST sequence (targeted fragment marked with yellow):
TTTCCCGGTTGATCCCTTCTTTTTAGTCCTGGTTGGTGGCTAAGGATACATCTTTAGTCCCGGTTAGTCCCGGATCCTTACTCCCGGTTGGAAAACCGGGATTAAATGGATATCCAACCGGGAGTAAAGATGGTTTCTCCACGAGTGTAGGGTGATTTGTGAAACCAGCTAATTATAATTTAAATCGATNAATAAAAGAATTAGTGATGATTAGCGCTTGGGTGGGAGGCGGGAGGAGTGGGTGGAGGTGGAGGTGGTGGAGTAGTCGTCGGTGTAGTCGCCGCTGTCGAAGGCCACCTGCCGATGCCGCGAGATCTCCGATGAGGCGGAGAAGTCGTCGTCGTGGTGGTGGTCCAGCGAGAGCGAGGCGTCCCCCTCCAGCGCCCTCACGATCTGGCTCATCTTGGGCCGCTGCCGCGCCGAGTGCCGGATGCTCGCCGCCGCGCACGCCGCCATCCTCTCCACCTCCACCGCCGAGTACTCCCCGCCCAGCCGCGAGTCCACCAGCTCCCGGAT



gi|86498997|gb|CI141630.1|CI141630 CI141630 Oryza sativa (japonica cultivar-group) mixed shoot (Normalized Library) Oryza sativa

GAACCGGGACTAAAGATCGGT
.| |||||||||||||||| |
TTAGGCCCTGATTTCTAGCGA

EST sequence (targeted fragment marked with yellow):
GTTGGTGTCACCAACCAGGACTAAAGATGGATCTTTAGTCCCGGTTATTTCATCCAGGACTAAAGATAGCGATCTTTAGTCCCGGATTGCTACTCCCGGTTGGAAAACCGGGACTAAAGGGGTTACCAACCGAGAGGAAATATGGTTTCTCTACCAGTAATACAATGTTACCTATCATTTGCATGCGACTTAAATAGTTATAAAAAAATTAAAAAACTTTAGTAGCATCGATTGTGATGATATAAGTCTATACGCAAATATGCATGACTAAATTTGATCTACAATTAGAGAAAAAAATAATAAAATTAAATAGTGAAAAGTACCCTTACAACGCAGATAAAATTTGTTATTTTGGTTACTTCATATGTTGATCGAATTTGGACTTGCATGTTTGTATAGTGTCTTATATCTTTATAATCTATCTTATCAAATTTTATAAAATTTTTATATAACTGTTTAAATTACATGCCTACACCTATGTGTAAAATATACTTACCCGTAATAAGGTTTCGCTCTATTTTCAGTTACTTGATCAAGTTCGTCCATTTTTTTGCTTTAAAAGAACCAGCACAACAGTACATGCTAATTAAACACCTTCATTAGTACGTACAGCGC



gi|29629679|gb|CB634688.1|CB634688 OSIIEb14F22.r OSIIEb Oryza sativa Indica Group cDNA clone OSIIEb14F22 3', mRNA sequence

GAACCGGGACTAAAGATCGGT
| |||||||||||||||.|
GTGGGCCCTGATTTCTAGTCC

EST sequence (targeted fragment marked with yellow):
ACAAAGTTTGATAATCCTATAGTCAGATATTACCCAAGAAACCTAATGAATTATGCTCACTTGGCTGGTTGTAAACAAATTATGTTCAATAGTACGCTGGTTGTAAACAAATAATTCTGGTCCCTAGGAGAAACAAAAGAATATTAATTTGCAGAATAAACCTATAATAACGTTGAAATATAATCGCTGGAGTAAGAGTATCAATTTGCAGAAGGTGCTGCTACATATGCATCTCTTGGTACGATTAATTCGGCGATTTCTCATAGGTAAGTATTGATTAGAGAAGCGGATAAAAAATTTCTCAATATGAATTAATGGTACTTCGATCACTATTAATTACTCCAGCCTCAAGTTACTAATTAAGGGGGGAGATCTACGCACAGCAGCCGATGTGTACTATTCATGTGATCATTAACACAGGGGGAGAAAGGGGTTTTACTCCCGGTTCGTAACCCCCTGTAGTCCCGGTTTCAACCAGGACTAGACTAAAGATCACTATCTTTAGTCCCTGATCTTTAGTCCCGGGTGAAAAAACCAGAAGTAAAAATCCATAAGATAGAGCCTTTTTAGTCCCGGTTGGTAACACCAACCGGGACTAAAGATAGAGCTAGCCTAGCTAGATCGGTTGCTTTATTTTCTTTTCTTCATTGTGTTTTTAATAATTTGATTTCGCTCCATCCCTATCCCAAAATCCCAAATAAATTATCCCCAAATCCTCAAATCCCCAAATCGGCCATATTCAAATAGATCACAAAATCTTAAAACAAAATTACATCACAACTTCTACAAAATTCATCACAAATACATCACATATTCACGCACATCACACACAAATCAAATACACATATCCAAATCACAAATTCT



gi|88724251|gb|CI747510.1|CI747510 CI747510 Oryza sativa (japonica cultivar-group) library (Kikuchi S) Oryza sativa Japonica Gro

GAACCGGGACTAAAGATCGGT
||||.||||||||||||. .
GTTGGTCCTGATTTCTAGTAG

EST sequence (targeted fragment marked with yellow):
TAAATTATTTTATACCAAATGCTTACAAGAGACAGCAAAAACAGTTTAAATCTATATTTCTAATCACTGGTGGAGAAACCAATCTTTGGTCGGTCGGCCGAAATCCACAATAGTCCCGATTCCACTAAAAACCGGGACTAAAGATGATCTTTAGTCCTGGTTGGTGGCTACAGTGGGCATATTTGATCTTTAGTCCCGGTTGGCACCAACCGGGACTAAAGATGATCTTTAGTCTCGGTTCTAAACCTGTTAGTCCTTGTCAGGCCCCCAACTTTACTCCCGGTTGGTGTTATAAACCTGGACTAAAGATCTAGAAGATTTTTAATCCCAGTTGGTATTACCAACCGGGACTAAAATTCAANGCTTA



gi|58656711|gb|CK045391.1|CK045391 42857siceh_0522.z1 Oryza sativa cv. PA64s panicle ferile cDNA library Oryza sativa Indica Gro

GAACCGGGACTAAAGATCGGT
||| |||||||||||| |.|
GTTGACCCTGATTTCTATCTA

EST sequence (targeted fragment marked with yellow):
TATAGTCCCGGTTTCCTAACGGGACTACAATCTAGGACTAAAGATAGCTATCTTTAGTCCCGGGCGAAATAACCGGGAGTAAAGATCTATCTTTAGTCCCAGTTGATAACATCAACCGGGACTAAAGAGAGGGATCTTTAGTCCCGGTTGGTGTTACCAACCAGGACTAAAGAGAGGATAGGGACAATCCCGGATGGTCCTTTTTTTTGTTACTTTTTTATTTTCTTCCGAATCGGATGGCATGCACATCCCAAATCAAACCACAAATCCCAAATAAAGTAACATCTCAAATCCACATCACAAATCCCAAATCCACATCACAAATCTTAAAATTACTTATACACACAAATCTAAAACATCACAAATCCTAAAAAATTTACGCACAAATCAAATACATCACAGATTATACATCTCAAATCCATACAATGAATCACAAAATTACATCTAAGTGAATCACAAAATATCAAAAAAAAAAGAGATGGTCGTCTGCGCCGCACGCCT



gi|29623965|gb|CB628976.1|CB628976 OSIIEb04N19.r OSIIEb Oryza sativa Indica Group cDNA clone OSIIEb04N19 3', mRNA sequence

GAACCGGGACTAAAGATCGGT
||||||||||||||||||.|
GTTGGCCCTGATTTCTAGCTA

EST sequence (targeted fragment marked with yellow):
AGATGCAGCAACTGGTACACGGGCGTCATTTACAGCAGATGCAGCAAATGGTACGCGAGCGTCAGCAACTGGAGGAACGCGAGCGTCAGCAACTGGAGGAACGCGATCGCTACGAGCGCTGGTGGATGCGGGAACCCTTTGCAGTCCCGGTTTCTAACCCCCTTTAGTCCCGGTTTTGAAACCGGGAGTACCAATCCGGGACTAAAGATCGCTATCTTTAGTCCCGGGTGAAATAACCGGGGCTAAAAATCGATCTTTAGTCCCGGTTGGTAACACCAACCGGGACTAAAGATCGAGCTGACCTTTTTTTTTTTGCATGGCCCTGTTGCTGCATATATATGTTTCAATACATATATATGCATACATATATATATATATATGTATATATATATATTATATTATATTATATGTATATACATGCATAATATATATGTATTTATACATATATATGTTATGCAAATGCATATGTACTGTATATAGATATATATATGACCAAAATATATTTACATTATAGAAAATGTGTACACATGCATATAGAAACATATGTAGTCATGTATTAATTACAATCCATTATATGTCCTAGCTAGCTACGATTTCGACGTAGTAGTACTCGCTGCTAGCTCAGAAGCTAAGGACCGGTGAATTGTGTTTCCGTCGTAGTAGAATTCACCCTTGGGATCAAGGATTTCTTCGTTGATGAATCCCATGAGTTGTTCTTGAACCGCCGCGATAAATTCCTTGTGTGTGGTCAGGTTATCCCTCATGCAAATAAACTATATGAATGTATGAAATTGATTAGTAATGAAGCAAGAAATTGCTACGTAATGAAATTTTGAATTTAAAAAAAAG



gi|88721289|gb|CI744588.1|CI744588 CI744588 Oryza sativa (japonica cultivar-group) library (Kikuchi S) Oryza sativa Japonica Gro

GAACCGGGACTAAAGATCGGT
||||||||||||||||| .|
GTTGGCCCTGATTTCTAGATA

EST sequence (targeted fragment marked with yellow):
GTTAAAAATGAGAGGAGGAGATAAGGTTGAGGAGGAGAGAGGAGTTAAAGGAGAGGAGGAGGTACCTCGATCCGATCGTGCACACCTCTCCGATCTCCGCGTCGATCTTTACTCCCGGTTGGTTTTACCAACCGGGACTATAAATAGATCTTTAGTCCCGGTTGGTGTTACCAACCGGGAGTAAAGCGTATGGCGATCTTTTTTCCCGGTTGATGTTATCAATCAGGACTACAAATAGATCTTTAGTCCCGGTTGGTAACACCAACCGGTACTAAAGATTGAAAAGTATCCTGTAGCTTTTAAACCGGGACTAAAGATATTTTTAGTCCTGGTTTTTAATACAACCGGGACTATTGTAAAATCTGG



gi|88489833|gb|CI427105.1|CI427105 CI427105 Oryza sativa (japonica cultivar-group) leaf of seedling 50ppm CuSO4 for 3 days Oryza

GAACCGGGACTAAAGATCGGT
.||||||.||||||||| |.|
TTTGGCCTTGATTTCTA-CTA

EST sequence (targeted fragment marked with yellow):
ATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAAAAATCATCTTTAGTTCCGGTTTATATTCAAACTGGGATTATTGTGGATTTTGTCCAACCCAACAAAAATGGTTTCTCCAGTAGTGCTTAAAATAAAAATCCCCACGAGTTACATGGATGCTCATACATATGATCCTAGTCTTCTCGGCTACAGATATTCATACCGGGTTTTCTCCTTCCTCAGTCACCTCCTTCCCGCTCGCAGGGGATTCCAGCACGCCCATGGAAGCCGCTAGGGCCAATCCCGTAGGGGGAAACCTGACGCGCCGCAATCTCCCTCAACACGTTGGTCGCGTTTTAGCCACCCAGTGNTGTTACCCTTCTGCCATNCCTCGTGAGCCTTTACAATATATTATTACCCANNTCCTGCATGNACAAGATCAACGCCGTATAAATGAGGATCCCTTGTTAGGTACGGACCCCC



gi|88693834|gb|CI735411.1|CI735411 CI735411 Oryza sativa (japonica cultivar-group) library (Kikuchi S) Oryza sativa Japonica Gro

GAACCGGGACTAAAGATCGGT
||||||||||||||||| |.|
CTTGGCCCTGATTTCTA-CTA

EST sequence (targeted fragment marked with yellow):
TGAGACATCACTAACCAGGACTATAGATCATCTTTAGTCCCGGTTCTTTTCCTGTCAGATTAACGTCAGGGGGCCGGTGATCGTGGCAGGCGGCGGCGGGCCGAGGCGGCGGGGCCGCTCCGGCGGCGGCAACGGCGTTGTTTTCTCTGTTTTTATTTGTGATTCACATGTATAATTTCGTGATTTATTGGATGGATCTGAGATGACATGTGATGTATTCGATTTGTGTGTAATTCNCTAGGATTTGTGATGTATCTGATTCGTGTATATATGTAACTTTATGATCCGTGATGTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAAAAAAAAAAAAAATTCATTTGGATCCGGCCATAAGGGC



gi|89198071|gb|CI117549.1|CI117549 CI117549 Oryza sativa (japonica cultivar-group) supermix Oryza sativa Japonica Group cDNA clo

GAACCGGGACTAAAGATCGGT
.| |||||||||||.|||| |
TTAGGCCCTGATTTTTAGCGA

EST sequence (targeted fragment marked with yellow):
GAGATATGTCTCCCACNTTGATTGGGAGAAAATAAAAAAGAAAAAGGGGATCATCTCACTACCGCAACCCTCTCTTTAGTCCCGTTGGCCCCTCTCTTTAGTCCCGATTGGTGTTGCTAACCGGGACTAAAGATCTATTTTTAGTTCCGGGTATTTGAACCGGGAATAAAGATAGCGATTTTTAGTCCCGGATTGGTAGTCCTGGTTAACCGGGACTACAGGGGGTTGCGAACCGTGACTAAAAATATTTCTCCACCAGTGGTTGTAACAATATTGCAAAATGTACTGTACTTATTACATGGTCATCATCGTGGGCAACACCAGTCCAGAGCCTCTGAACTTGCTCTCGGTAATCTCGTCGATCCTTGTGGCCATCTCCGGCGACAGGTAGTTCGGCCAGCCCCCGACGACGCCTCGCCGGAAGAACTCGGCGTTCCGCATCGGCTCCTCCATCAGCTCAATCGTCCCTGACCTGTTCACCTCCGCGCCCGCTAGGCTCTCGAAGCTGCACGCCTTC



gi|88661734|gb|CI458939.1|CI458939 CI458939 Oryza sativa (japonica cultivar-group) 4.5 leaf-stage leaf Oryza sativa Japonica Gro

GAACCGGGACTAAAGATCGGT
|||||||||||||||| |.
GTTGGCCCTGATTTCTACCTC

EST sequence (targeted fragment marked with yellow):
GGGATGTGAATCTGTGATGAATTTTTTTAGAACCCTGTGATGTAATTTTTTTAAGAGTTTGTGATGTATTTGGAGATGATTTGTTTGAGGATTTGAGGATTTGGAGATGTTCTGTGGTATGTGATGATTTGGATATGGGAGGGGACGGTGTGAAATCAATATTCAATATTAAAAGCAGAAAAAAAAAAGAAAAAAAATATCTTTACTCCCGGTTGGTGGCTCCATCTTTAGTCCCGGTTGGTAAAGATTGATTTTTAGTCCCGATTATTTGAACCGGGACTAAAGATAGCGATCTTTAGTCCCGGATTCGTAGTCCCGGTTGAAAAACCGAGACTACAGGGAGGTTACGAACCGCGACTAAAAAGCATTTCTCCACCAGTGTCAGAACGTGGTCCATGTTAAAT



gi|87017737|gb|CI289870.1|CI289870 CI289870 Oryza sativa (japonica cultivar-group) etiolated shoot Oryza sativa Japonica Group c

GAACCGGGACTAAAGATCGGT
|||||||||||||||||. |
ATTGGCCCTGATTTCTAGTAA

EST sequence (targeted fragment marked with yellow):
AGCTATGCAGGCCTCTCAAATGTTTGCCAAGAAGTAGTAAAGATTAATTTACTATCAGAATACTCTTACAATATTAGAGTACACGGCCATAGAAAACGGCCACATCAACCAATGTACCCATGCCATCGCTGCCGCTATCAGCTCTACATATAGGATTCTCCCCCTCTTTCTGGTGGAGAAATGATCTTTGCTAGGTCGATCCAAAACCATAATAGTCTCGATTCCAAAAAAAACCGGGATTAAAAATGATCTTTAGTCCCGGTTAAAGATCCTACTAAAAATGTCAGATGTATGTCGGGGGCCGAG



gi|66929560|gb|CX116408.1|CX116408 EI104D17 A normalized whole-life-cycle cDNA library of rice Oryza sativa Indica Group cDNA cl

GAACCGGGACTAAAGATCGGT
|||||||||||||.||||.|
GTTGGCCCTGATTTTTAGCTA

EST sequence (targeted fragment marked with yellow):
AAACAACTGTCTCAAAATCAGTTAATTAGTAGCTTAGATAGCAAAGATCATCGGAGGATCGGCGATGGCGGCGGCGCTCAGGACCACCGGCGGCCGGCGGCTGGCGGCGGTGCTCGTCATGATGCTGTTCGTCTTGGCGGCAGCGCTGCTGGAGGCGCCAGCGATGGCCTCCGCCGCGAGGGTGTTGCTTCAAAGTGGACAGCTTCCGACTCCGTATCCGACCTGCAATCCAGGCCAATATCCATGCCCATCGCGTACTACTGTGCCATGATTCACTGGTGGAGAAATCGTTTGTAGTCCCGGTTCGTAATCCCCCTTTAGTCCCGGTTGTCTAATCGGGACTACGAATCCGAGACTAAAAATAGCGATTTTTAGTCCCGTGTGAAATAACCGGGACTAAAGATCGATTTTTAGTCCCGGTTGGTAACACGAACCGGGACTAAAGATCGGTCAGCCACGTGGCTGGCTGATCCATCTTTAGTCTCGGTTGGTGTTACCAACGGGACTAAAGATCTATGTACCATTTTTTTTTATTTGCATTGCCATGTTTGCTGCATGGTTGATTATACACACCATATATATATATATATATATATATATATATATATATATATATATATATATATACATACATATATACATATATACCTATATATATATACCTATATATATGCGCATGTTATATGTCACACAACAATTTACCCGCTTTTCATGTTAAAGGCTCAACTTAATGACACATTTGTTGCCAAATATTAAACCAAGAGAAGAGCCCAATAAAAGAATTATAACGCACATAACAAACGAGACCACATGGAGGCGAAAAAGAACTAAGAGACTG