| mature miRNA: GACAGAAGAGAGTGAGCAC species: Sorghum bicolor database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|45960304|gb|CN131140.1|CN131140 RHOH1_46_D11.b1_A002 Acid- and alkaline-treated roots Sorghum bicolor cDNA clone RHOH1_46_D11 GACAGAAGAGAGTGAGCAC EST sequence (targeted fragment marked with yellow): GAAGAAGCCAAATACCCTCAGCACTTATCAAATAGATATTACATCATTTCGTTCTGCGGGTGTGCTTAGTCTCTTCTCTACCCCTACTTAATCTACATTACATGAACAAAACCTTCTACAGTAAGCACAAGAGGGGAGCTCTTGATCTGAATAACTAGACAGTTTATGAACAGCGCTTCTAAGTTTTGAATGGAGAAGTCATGTAATCATACTGTGCCTCTTCTGTAAGCTTGTAGCTTGTGTTACATACAAAGAGGGGCTTACTCCAGCAGTAGACGCGAGCCGCTGTGATATGTAACCCCGTACAAGGTATCTCTACCAAAGAATCATCTATATGTCCGCCAAACAGCTTTGAATTATAGTGGCTGTAGTTCTTGCTCGGGAGCCACTGAATCAACAGGTCTGTAGGCAGTTTGACCACTAAATTTCTTTCTCCAAACAAGTACTACTAAAAGGGCTGACAAAGTGACCAAAACAACTAGTAAAATCCCAAGCAGTATAGAGACTACATGTTCTTGAAACCATGACCTTCTCGGTAAAGGCTGCACATTCCACTCTAGCAATTGATAACTGCCAAGATTTTCAGGCAACTGAACATGATGCTGAGTTAACCGATAGATGATACCCATTGCTGTTGCGTTGGACATAGCATTATCAGATTCTGCTGGGAAAATACCCC | |||||||||
gi|14593578|gb|BI141135.1|BI141135 IP1_43_E12.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA, mRNA sequence GACAGAAGAGAGTGAGCAC EST sequence (targeted fragment marked with yellow): ATTTATGTTTGGATGTCAGCTAACATTTATCTATAACAGCAGCCTACGACCTGTTCCCTCTCTTTTGTTTATAGCGTTCTTAGTGCTACTCGTACTTGGTAAACTAGATAACTGTGGTAAGATGCCTGGGTAAGTAGATTTACGTGTATATAATACCAGATTGTAATTAATACAATAATCTTCTGAACATAGTATAATGGGGAGATAGGATTTCAAGTTACTATTAGTAGCCTCAGCTCAATAGCTGTAAGATAGCTCTGAATCTCATCATCCAGGTGCAAGAGCAACACACGGTGAGCACGGATTTCTCTCTCTTTATTTTTTCCCAAAGGAGATCTAGCAAGTTGATCATCATCTCTAGCAGCTTCTGTGGACACCTCTTTTAAATTCTGAAGAAGTGAAGAGGTTCTTATCATGTCATTGTCTCATTGATCAATAATTAGGAACTCTAAAGGGAAATTGTTCGAAAGAAGAGACTAAAGTGAAACAAATTAAAATTATGACAACAGAATATAACATTTCAAGTGACGTAGCA | |||||||||
gi|160712826|gb|EH409419.1|EH409419 RTHAIR1_37_F06.g1_A002 Sorghum bicolor BTx623 Root hair Sorghum bicolor cDNA clone RTHAIR1_3 GACAGAAGAGAGTGAGCAC EST sequence (targeted fragment marked with yellow): AGAAACTTATCATTGGTCCCCCAAGTGCCGATAGAATCCAACTTCCTGATGGACGGCATCTGGCTTATGAAGAACAAGGTGTCTCAGCTAACAGAGCAAGATTTTCACTGATTGCTCCTCATTCTTTTCTGTCATCAAGGCTGGCAGGAATCCCTGGAATCAGTGCATCTCTTCTGGAAGAATTTGGAGTACGACTGGTGACCTATGATCTTCCTGGTTTTGGTGAAAGCGATCCACACCTAGGCCGGAATCTCAATTCTTCTGCACTGGACATGCTCTATCTGGCTAATGCTCTCAATATTCCGGAAAAGTTCTGGGTTGTGGGCTATTCTGGAGGTGGCATGCATGCCTGGAGTGCTCTTCGTTACATTCCTGATCGAGTTGCTGGTGCAGCAATGTTCGCACCTATGGCAAATCCATATGACTCCAAGATGACCAAAGACGAGAGGCGTAAAACATGGGATAGTTGGTCAACGAAACGGAAACTGATGCACATTTTAGCTCGGAGGTTTCCATCACTGCTACCGTTCTTTTATCGCCAAACCTTCCTTTCTGGAAAGCAAGGACAACCTGAGAGTTGGTTGTCACTGTCATTGGGGAAGAAGGACAAAACTTTACTG | |||||||||
gi|14593685|gb|BI141242.1|BI141242 IP1_53_B02.g1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA, mRNA sequence GACAGAAGAGAGTGAGCAC EST sequence (targeted fragment marked with yellow): TCGGTTCCTATCTGATCGTTCTCTTCTGTTTTCCTAGTAATCACTACACGGGGTGTTGATGATCTCATTAACATATTCCGGCGGCCTCCATCACGCAAGCTCAAGGGGGCGTAGGCTATAGGTTATGTTTTGTGTATTAGCGCCAAGAGACGCGTGCCTAGTTATTAGAAGAAGAGATAGACATGAGGATGACAGGCAAGCTAGCTTCCCACAGCACATAGACATGTACTTTCAAAATTTTACTGTTCCCCCGCACTCCGGCCAAATGTGAGTGGCTTCAAGTTCACAGAGCACANAAAAACAATTTCTTCCTTTTTTGTGTGAGGAAATTGCGANCTGTAATTTAGTCTGTATGTTGGTT | |||||||||
gi|34518955|gb|CF490086.1|CF490086 POL1_62_H07.b1_A002 Pollen Sorghum bicolor cDNA clone POL1_62_H07_A002 3', mRNA sequence GACAGAAGAGAGTGAGCAC EST sequence (targeted fragment marked with yellow): AAAGCAAACTCTTATAATAGCATAAACATGACTTCAAAATAATTCTGTCCTTGGACGATAACACAAGTTTATGTTGATAATACAAGGGGAACAAAAATGAATAATGAAAAAGTGAGAACTACACAAATACATGAAAGATTGGAAATTGCCTAATAAAACGTTGCACTAGATCATAGTTTGTTGCTGCTTTGATTGCTCACCTTGCCAAGCCCATACTATGTCCTTTAGTGCAGGCCTCATTTCTCGGTTCAAGACCTTTTGATACTCTAGAGTGTCGCCATTCGTCTTCTTTATCTCCACAAGATGAAAGTTTGGGCTAACCTCAAATATCTCAGCATCGATACCCATCACCCCTTTCCTTCCAGGCTTTGAAGCTTCCATCTTTAACAAACCACCATCCTTTTTTGTCAACTTCAATCGCAAATTCTTCGCAACATCTTCGATCTTTGATACGATTGTTGAGCTTGTGTTGGTGGATGTGAATTTGTATTCTCTCTTGTTGTCAGATTCTTCAAATAAACCTGAGAGGTCCAAACCAGTTGATAGAGATATTATATCAAATGCATTCATGTTGGTAGGCTTCTTTTCTTCTTGTTGCTTGCTCTCTGCTGTTATGTTGATGCTTAGTGAATCAGAATCTGCATTCTTGTCTACCTGAGGGGCATTCTTAGACTGTAAATTATACCTAAGCAGCTTTGCATCTAAGCCCTTCCTAAACCATGGATTTTCCATGATTTTTTCCATTG | |||||||||
gi|18062344|gb|BM324019.1|BM324019 PIC1_30_D02.b1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum bicolor cDNA, mRNA sequence GACAGAAGAGAGTGAGCAC EST sequence (targeted fragment marked with yellow): GCACGAGGGTCCTTTCTCAGCTTTAATGTTTGTGCCTATTTTCTTCTTAGTGAAAATCACCTAGTTCCTACTAGGTTGGTCACATTTTTTTAAGTTATATCTATCATGCAATGATCCAAATTATGGGCAACTTGCCATTTCCTATAATGCTGACAGGATGTTTGTGGCTTATGCTTTAACCCTGTCTTAATAAGAAATTGATTTTCTTCTATCTTTTGTGCAATGTTCCACATGTTTCCATAAGTTTTGAATGTAAAACTAAATATGTTATTGCTTGAAATGATTTGTTTTCATAAACTATTAGTTAACCATCAGTACTATATCAGTTTCTGCTTTTGGTTAACCATCAGTACTATATCAGTTTCTGCTTTTGGATTGCACTGCTTAATAGATGACTCTTATAACATGTGTGAAATATGAGTAGCTAAACTCCTCTGAGCTAACTATAGTATCATTGCTAACCCAGGTTACTGCTTGATCAGTTAACCTAGCTAAAGCTGCTTCCCAATCCCATATAACATAAATCTCANAATCCAAGTACATTTGTTCAATCTCTTCTGTTCTCCACTTAAAACCTAAATCTGTTACATGTTGCAGTT | |||||||||
gi|33108155|gb|CF071496.1|CF071496 FE1_13_C01.g1_A002 Iron-deficient seedlings Sorghum bicolor cDNA clone FE1_13_C01_A002 5', mR GACAGAAGAGAGTGAGCAC EST sequence (targeted fragment marked with yellow): AGTTTTACTCCCCCAGCTGCTGATCCCCCAATCTCTCCTCGCTCTCTGCTGTCCGTCTATCCCCGCGCCGCGCGCGGTTGCTGCCTTGCTGCTGGTACGATCTCTGTCCTGATTCAGAGATTCTAGCCAGGACTTGGTGAAGCAGTGCACGATTCGATTCGGTCTCTCAGCTCCGCCGCGGGGGTCTTCTTTTTGCGGTTTCAGGTTCTTTGCTTGTGGGATGAGTGGAAGGAAGGACGCCCGGTTGCAGAAAGAGGGAGAAAACCTCGTCTGCACGTGTTGCTGATGATCCGTCCCGTGCTGATAATATACAAGCTCGACTGAATCAACTGTTTGAGCCTGACAGCACCATGGGTTCCGGCGATTTGAGCTCGGAGATGGAGAGGAAGGTTCTTGGCCTGACGCTGTGGGTCTGGATTGCCATCGGCGTGGTCGCACTTCTCGTGGCAATCCTGCTGATGATCTGCATTTGGGTGGCGTCCCGCCGGAGGACCAAGAGAACCATGGACACCCTGAGGCAGACGCAGATCCCCATCTACTCCAAGGAGATCCCCGTCGACCGGGTCGGCGGGCGCAGC | |||||||||
gi|18069716|gb|BM330579.1|BM330579 PIC1_53_G11.g1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum bicolor cDNA, mRNA sequence GACAGAAGAGAGTGAGCAC EST sequence (targeted fragment marked with yellow): GAGAAGAGCCAAAACTCATGGTGTTGAGGAAGATATTGCTGATGACCGGCTTCAGTTTTGGATTGGGCGCAACGCACAAGCTCCAAATTCTCATGATGCTATAGATGTGGAGAGGGGTCTAACAGAGCTGAGGAAATTGGGCATAGAGCAGCAATTGTGGGAGGGCTCGCGAGCAGATATAGATCAAGCTTCTTTGGCGATGGAGAATCAGTAAGAATTTGCTAATTTTCCATGGCTGTGTATCATCCCAGTTTTGGAGAAACGGGAACTTTGGTTCCCAGCAGGTCTCGGCCCTTTGCATCATCAAGTATCAGTCACAGAATAGTGCTCCGAGCTTGGGGTGTGACCGATGGACTTTGTCCAAATTCCGATGAGTTTGTGTAGTGCATGTGCAAGCCATTCTTCTGTTGTTATTAAAATAGCTTTGTGAAATGTGTAATAGCTTTGCGTTGGCAAGAGAAAACGATGACAACGACGACCTCACTTCCAGCAATTGTGAATTCTGTGATTATCCCACCTTGTTTATTCTCTGCTGTCGAGCTCAACTTCTCCGCACCAAGGAACGTGCGTGTTCCTGCAACAATATTGAACGAGATGATTTTGTATAATTCTCTGGGTAGTATGAGTTTTAACATTCTATAAAACCATCCCTGTTCAATCC | |||||||||
gi|160712375|gb|EH407062.1|EH407062 RTHAIR1_6_H02.g1_A002 Sorghum bicolor BTx623 Root hair Sorghum bicolor cDNA clone RTHAIR1_6_ GACAGAAGAGAGTGAGCAC EST sequence (targeted fragment marked with yellow): GGAGTTTGCTTGGACACACTGATATCGCTGATGTTGGACTCACCCTCCAATCAGATGGATTTCGAGGAATACAGTGGGCTTGAAAAGGTTGCTGAACTTTTAAAGGATGTGCAAGTGGAAAAGCATATAAGATTGAAATGCGGGGAGTTCCTATTGTTGCTCATTGGACATGTTTATGTGAAGGAAAACTCTCCCATACATGATTAATAGATTAATCTGTTTGGTGAGCAGTGTGCATCGCTTATATGGGCAGCAAGCCGGTTTGGCTCCACCTTGGATGCGGAGCAAAGGCAGACGACCTTGCAAATACAAGCAATGAGAGTTGTGGAATCCTTGGAACCCTACTAGGACTGGTGCCTTCATCTGTGTAACTTACGGGTGATGACGATTTGATGTCTTTAATCTGAGCTGCATGCTCCATTTTGTCCATGCAAGCTTTGTTGTCACTCTCTTCTGTGTAAAGTCATTCTTATGCTACTTTTTTTAGTAAGCTTTGTTGAAAGGATTGTATTAGTTCCATTTGAGAACAATGCACTATGGAGACA | |||||||||
gi|45996430|gb|CN152438.1|CN152438 WOUND1_82_C02.b1_A002 Wounded leaves Sorghum bicolor cDNA clone WOUND1_82_C02_A002 3', mRNA s GACAGAAGAGAGTGAGCAC EST sequence (targeted fragment marked with yellow): AAATGAAGCAAAATCCATAAATGATTATACCAAACATGTGCATCCAGAAAAGAAAAAATGTTACAGTTCAGTTCGCATATAAGAAGTCAAACACTCAAATACACAAGCAGTAGCAGCATGACGATACGACTAACACAATCTAACAGCGATACAGGTAAGCATGCGAAGTGAAAACTAAACTTGATCGCAAACACATGCAACAAGAGATCATTGAGCCATTCGCTTCTTCAATGCCTGCCTCGGGTTCTCGCCCTGCTCGCCTCCTCTGGGGTCGACGGGAACAGCTCTACATACCTCGTCCCAATGGTCATCTTATCCTTGCACATGGCCGTCTTGGCAACTTCAGCAGTGGGGAACTCAACAAAGGCTTCACCAGTAGCTTTCCCATCTGAGCGGTATGCAATATGCACATTCTCCTCTGTCAGCTCATACTCCAGGAAGAACTTGATGATGTCCTCAGTGGTGGCAGAGTAGGGAAGCCCACGGAGCTTCAGCACCTCAGTGTACTCCATACTGCCCTTGTCTTCAGCCGGCTTCTTAGACCTTGGAGGAGGTGGGGAGCGGCGGTACTCTGACTCAAAGTAACCACCCTGGCTCACCTCGTTGGCTATTGCACAGTAGTACTCCTGCTTCTTGCATCTGAACACCTCAACATATCTCCGGCCCATGTTCTGCCTGTTGCGATGCAGCGCANATTCTGCTTGCATAGCTGTTGGGAAGACCACAAAAGCCTCACCAGTGAAGCGCCCATTCTTGTTAACCAGGAGGCAGTCCACTATGTCCAGTCCCACAAAGAACTTGCAGATGTCAATGTCGTTGCAATCAAAAGGGAGACCACGCAGCCGGACACCTGGGAAGTTTTGGATGCCAGTGCTAGCCCCTGCACCAG | |||||||||
gi|14365556|gb|BG947367.1|BG947367 IP1_4_F04.g1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA, mRNA sequence GACAGAAGAGAGTGAGCAC EST sequence (targeted fragment marked with yellow): CTCACCCCCGTGCTCGACTCAGATTGTGCTCTCTCTCTTCTGTCATCCCCCGCCAACTCCTCCAGCGTCGACGTGAGCCGGATGGTCGTCCAGCCCGCGGCGGAGCACATCCCCATGGCGCAGCCCCTCGTCCCCAGCAGCAGCCTCCAGCACCACCACCAGCACCACCAGTTCGGCAGCTCCCCGGGCGGCTGGTTCGCCTGCTCCCAGGCCGGCTCCAGCGCCGTCTCCGGCGCGGGCACCGGCACCGGCGGCTTCGCCTGCCCCGCCAGCGTGGAGAGCGAGCAGCTCAACACCGTCCTGGTGCCCAGCAACGACGCCGGCCACGAGATGAACTACCACGGCATCTTCCACGTCGGCGGCGAGGGATCCTCCGACGGGACGTCCCCTTCGCTCCCGTTCTCGTGGCAGTAGCTTCTTCCGTCCGGTTCAAGCGACCAGTAGTGATCGGTGTTCAGCTGTAGTGATCCTGTTCTTTCTGTGTTTATTTATTATTATTATTCTCCCTGTCATTTGCTCGTTTCTTCGTTTTGCATGCCTGATGCATGCAGCCTGAAAAAACTCGCATAAAATTAGTGCCGAATTTCTCCTGAAACCGTTCTGATATCTTACTGATTC | |||||||||
gi|14365557|gb|BG947368.1|BG947368 IP1_4_F05.g1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA, mRNA sequence GACAGAAGAGAGTGAGCAC EST sequence (targeted fragment marked with yellow): CGCGGCCCCGCCGCCCGAGAGCAGCAGCAGCAACAAGATGTTCTCCGACGGGCTCACCCCCGTGCTCGACTCAGATTGTGCTCTCTCTCTTCTGTCATCCCCCGCCAACTCCTCCAGCGTCGACGTGAGCCGGATGGTCGTCCAGCCCGCGGCGGAGCACATCCCCATGGCGCAGCCCCTCGTCCCCAGCAGCAGCCTCCAGCACCACCACCAGCACCACCAGTTCGGCAGCTCCCCGGGCGGCTGGTTCGCCTGCTCCCAGGCCGGCTCCAGCGCCGTCTCCGGCGCGGGCACCGGCACCGGCGGCTTCGCCTGCCCCGCCAGCGTGGAGAGCGAGCAGCTCAACACCGTCCTGGTGCCCAGCAACGACGCCGGCCACGAGATGAACTACCACGGCATCTTCCACGTCGGCGGCGAGGGATCCTCCGACGGGACGTCCCCTTCGCTCCCGTTCTCGTGGCAGTAGCTTCTTCCGTCCGGTTCAAGCGACCAGTAGTGATCGGTGTTCAGCTGTAGTGATCCTGTTCTTTCTGTGTTTATTTATTATTATTATTCTCCCTGTCATTTGCTCGTTTCTTCGTTTTGCATGCCTGATGCATGCAGCCTGAAAAAACTCGCATAAAATTAGTGCCGAATTTCTCCTGAAACCGTTCTGATATCTTACTGATTC | |||||||||
gi|7553383|gb|AW679616.1|AW679616 WS1_2_B01.g1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA, mRNA sequence GACAGAAGAGAGTGAGCAC EST sequence (targeted fragment marked with yellow): AGTCATGGCAAAGATGAGCCTTGGCCAATGAAAGGTCCGGACATGTCTATAACTGCTTCAAAATTTGATGGAGCACCGGATCTTCAGCGTGCTCTCTCTCTTCTGTCAGTTGGCGCTTGTGGATTGCCTGATCCTGTACATCAAACATCCTGCGTTATCCAATTCACTGGTGCCAGCGAGAACAGTGGTGACCTTCATTTATCACATGGGGGGAACTCTGGTCCAGCTTCATGCGCTGATGGACAGCATATAGCTGCTCAGTCTCAGTCTCAGCTGGTTCGTTTTACCATGGATACCAGCAACAATGTCTATGAGCCCAGTTTCTTCGGTGTAAACCAGATAAATTAAGCGTGAAAGATACACGCCAGTTGATCATTTGGATAAATAGCCATGAAGATGGCCTGGGCTTGTGCAGGAAGTTCTTCAACCAACCACCGGACATAAGGATCTCTCAGTTAATGTTATCTGCATATTTATCAGCTTATGTTTAATATGCAGTTCCAACCTGTGATTGACCCATTTTTTCTGTTGTTTTTTTTGCCCCCTGTGATGTGACGACTCTGGAACTTTCTAAGTGTGATACTATGTAGTTTTACACTTTTATTTTACTGCCCTGATGATGATGATGATGATGATGTCAACGGTTGGATATCTTTAAACTGTCCTTGATGAATCTGGACATGTTTTTTT | |||||||||
gi|6676212|gb|AW286368.1|AW286368 LG1_330_H03.g1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA sequence GACAGAAGAGAGTGAGCAC EST sequence (targeted fragment marked with yellow): TTCGTCGCCAAGATGAAGCGAATCACTCCGCGACAATGATAATTTCATGTTCCTCATTTTTCCTTGGTTACTGGACTATGCCTTGAGACAAACAGCATCAAGGAATGTCGCCGAGTATGGATCACCCTTGTTTGCTTTTTTCATGTCGGCAGTCGCTCTCTCATTTTAATTCAATTTCATCCCATCCCGTCTTTTCCAGACGAATAAGAGGCTGCGCTGTTTCATCTACAGTATCTTCCCATATTCTTACCCTCTTTTCATCTGAACATATGTGCGATGATGCAGAGTAATACCGAAATGTTTTATGTCCCCCGCGCTCATTCTTTTTTGTGTTTCCCAAGGCTTTGTCTCGAACTAAACTAAACCCCCGGCGATATGTTGATAGTTGCTCGTTTCAAAGAGTCAAAGACACAGCCACAAAGAGATGGAATGTTTGCTGGTGCAAGGGGCCTTGCCTCAGATCAGATCAGATCAGTCACTGTAGATCAAAGATCAGATCGGTCACACCGGAAGAGATAGTCAAAGAGACGAAAAAGCGAAAAGCGAAAAACTTGCAAACTTGTTC | |||||||||
gi|13585425|gb|BG556427.1|BG556427 EM1_66_H12.g1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA sequence GACAGAAGAGAGTGAGCAC EST sequence (targeted fragment marked with yellow): ATGCTAGTGAAGTGTATTATGCCAAACTCCGTGCTGCGCATGGAAAGCGATTTGCCCCCGAGGACGCGCAACCCTTGTCTCTGGCTGGGAAGAAACCTAAGGGCATTCGAAGTGTCAGTCCGGATGAGCCGGTTATCAGCCAAAGCATCCGAGCCAGTGACGCCTGGACGGATGATCTGGAGCCTTACTGAGCTACCTAATAAAGCCCCAAGAATGAGGTGTTCTCTCGCTTGCACAGTGCCTCGGATGACTATCACGTGAACGTTTCATTTTCCCTCTTGTTTTCGGTGTCAAAAATTAGGGCTCATACCTTCTACTCTTCTGACTATGTCAGTTAATCTGTACAGAACTTTTTCTATGTCCTGATGAGCAACGGAATGCTCAAGATGACATGACCTATTTTCGTCCAAGTTTTCTTGTCTATATGACTTGGCCTCTTTTATTAATCTTCTCTGTTTGTATGATTTGGGTATTCTGTTTTTGTTTACTTTCAGTGGACTTTTACTTTTCTTCTTTCTTCTTTTTTTTTTTCTCCGTTATCTTGCGCCTTTGCGTTTGTCTTCGTCTGCTTCTTTCTTTTCTCTCGGTATGGTGTTTATTCTCTTCTGGCTTCTTTGGTCCGGGTATTTCCCGCTATACTTGTATGATTCGAGATGGTATGTTTGCTATGTTTTGTTATGCCTTTTCTTAGGTTTGATATCAGCGCAGCGTAGTATCA | |||||||||
gi|7660905|gb|AW747167.1|AW747167 WS1_66_F11.b1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA, mRNA sequence GACAGAAGAGAGTGAGCAC EST sequence (targeted fragment marked with yellow): CACGGGGTGGAGGCGGGCAACAATCCCGCGGAGCTGGCGGCGGCCGTGGGTGGCGCCTCCAGCAGCTCCTCCCGGGCGGCGGCGAGGAGCAGGGTCGCGGCGGCTGCTGGCGCCTCCGGCTCCTCCCCGGTGGCGGCGGCGAGGAGCAGGGGCGCCGGCGCCGTGGCCGCGGCGGCGGGCGGCGGCGGTGGCGTCGGGCCGAGCTGCCAGGTGGAGCGGTGCAACGCCGACATGGGCGTGGAGAAGCGGTACAACCGGAGGCACAAGGTGTGCGACGCGCACCGCAAGGCGTCCGTCGTCCTCCTCGCCGGCCTCCGCCAGCGCTTCTGCCAGCAATGCAGCCGGTTCCACGAGCTGTCGCACTTCGACGACACCAAGCGGAGCTGCCGCCTGCGCCTGGCGGGGCACAACGAGCGGCGCCGGAGGAACCCGGCGGAGGCGCACGACCAGAACGGCGGCCGGGGCGACCCGGGGAACCACCACCTCCACATCAGATCAGATAAACCTATCTAAGCATGCTCTCTCTCTTCTGTCATGCAGGATGCACCTAGCATCACCGATCGATAATCCGATTTGTGTCTCAGTGCCTACCCTGTCCTGTGTCTGTGTGTTGCGTATGGTACGTGCTGCTGCTACTACGTGCTAACTT | |||||||||
gi|9851022|gb|BE595949.1|BE595949 PI1_50_D04.g1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA, mRNA sequence GACAGAAGAGAGTGAGCAC EST sequence (targeted fragment marked with yellow): AAATTTGATGGAGCACCGGATCTTCAGCGTGCTCTCTCTCTTCTGTCAGTTGGCGCTTGTGGATTGCCTGATCCTGTACATCAAACATCCTGCGTTATCCAATTCACTGGTGCCAGCGAGAACAGTGGTGACCTTCATTTATCACATGGGGGGAACTCTGGTCCAGCTTCATGCGCTGATGGACAGCATATAGCTGCTCAGTCTCAGTCTCAGCTGGTTCGTTTTACCATGGATACCAGCAACAATGTCTATGAGCCCAGTTTCTTCGGTGTAAACCAGATAAATTAAGCGTGAAAGATACACGCCAGTTGATCATTTGGATAAATAGCCATGAAGATGGCCTGGGCTTGTGCAGGAAGTTCTTCAACCAACCACCGGACATAAGGATCTCTCAGTTAATGTTATCTGCATATTTATCAGCTTATGTTTAATATGCAGTTCCAACCTGTGATTGACCCATTTTTTCTGTTGTTTTTTTTGCCCCCTGTGATGTGACGACTCTGGAACTTTCTAAGTGTGATACTATGTAGTTTTACACTTTTATTTTAC | |||||||||
gi|34515649|gb|CF486780.1|CF486780 POL1_39_E07.g1_A002 Pollen Sorghum bicolor cDNA clone POL1_39_E07_A002 5', mRNA sequence GACAGAAGAGAGTGAGCAC EST sequence (targeted fragment marked with yellow): AGCTAGCGACATCCAGGTGGAAAACTAGATTTGCTGTCACGGAGGTCTCGATCTGGGAAAGCGACTGAGGCGACCCCGGGGTCGCTATCTACCGGCGCCGGCCGGCCTCTCGCCCGGCCGGATCCTGGACACCGTAGGCCTCTCGCCCAGCAGGGTCCCGTGCGCCCGTCCACTCGTCGTTCATCGCAGTGACCGGCGGCCGCAGCAGATCCGAAGTCTGCGGTGGTGCCGGGCCGGGTGTGACGAGTCCTCTGGGGCTGCTGCACGCCGGAGTCGGCCGGCCAATCGATCCAACGGATCCCGTGCGCCGTATTTTACTTTTCCGTCGATCGTTGTTTTCGTCTGCTGCTGCAGTGAATCCAGATCCCGACACCAACGAAGCCGGCCGACTACTGGAAGATCTGCGTCGGGATCGGCACTAAATCCCCCTCGGATCGCACACTGCTTCCCCGTTTGAAGACTCATACAATAAGAAACTCTTCTCCCTTCTTTTTTATTCTTGATCTTTGTTGTTTGGGTTTGTTTTTTGTTTGGTGTTCTTTCTCTTCTCTTCATGGCGATCTGATGAGGACTCGCCGCTTGACACTTGCACCTGGGATCTTACAGACACTTCGTCCTTCCGCTCCAACAGAAG | |||||||||
gi|14593686|gb|BI141243.1|BI141243 IP1_53_B03.g1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA, mRNA sequence GACAGAAGAGAGTGAGCAC EST sequence (targeted fragment marked with yellow): GCAGAAAAATGATCCCTTCATATCAGCACTGAAAAAGGAACTGTCTGAACACACTACTGATGTGCATATTCAAAGTGATGCGCTTGATGGCATGTTCACTTTCTATGATGCAACGAAAGCAACTCTAAATGTGTACCAGGTTGCAAGTGTGACCTTTGATCTGCTGTTCCTTCTGGTGCTCGGTTCCTATCTGATCGTTCTCTTCTGTTTCCTAGTAATCACTACACGGGGTGTTGATGATCTCATTAACATATTCCGGCGGCCTCCATCACGCAAGCTCAAGGGGGCGTAGGCTATAGGTTATGTTTTGTGTATTAGCGCCAAGAGACGCGTGCCTAGTTATTAGAAGAAGAGATAGACATGAGGATGACAGGCAAGCTAGCTTCCCACAGCACATAGACATGTACTTTCAAAATTTTACTGTTCCCCCGCACTCCGGCCAATGTGAGTGGCTTCAAGTTCCAGAGCACAAAAAACAATTTCTTCCTTTTTTGTGTGAGGAATTGCGACTGTAATTTAGCTGTATGTTGGTT | |||||||||
gi|34515892|gb|CF487023.1|CF487023 POL1_41_G01.b1_A002 Pollen Sorghum bicolor cDNA clone POL1_41_G01_A002 3', mRNA sequence GACAGAAGAGAGTGAGCAC EST sequence (targeted fragment marked with yellow): AATTGAACGTTAACCAGCGCCAGGCTAAACCAACAAAAGAATAGAGTTAGCCATAGTGTAGCAGCTACGCCTGTTTACAGGAAATTACAAAAGAAAAAAAAAAAGGAAAGGCCGTAGGCAAAGTGAGAGAGATATACAGCTAAGCTAGCTACATGCTCTAAACACTTGCAGATAAATCAAAGTAGCGAGGTTCTCTTTAATTTTCTGCCACTGACAGCCAGGCATCAAAGAGCCACCGGCAGTGACACGGAACCTCCAGCAACAAGAATATTGTTACGTGTGTGTCTTCTAAGCGTGCCCCCAGAGGCCTCAAATTGGAGGCCCTGCTGCACAAAAGAATCGATTAGCCAGCCACTTCCTTTGCTGCCAATTCTAAAGTCAGTCTGCTGCCCCTGTGCTAATCAAATCAGCTTTGCCCACAATCACCACCTGATCCCTCTCTTCTGTCACCTCGTTTTGTAATTAACAATGCAACTAAACAAAGAATTCGTCTGCTCAGTAGAGGTTAGCACCTGTGATTCCCTAAAATGTACGTGGAAAACCAAGCGACAACTTGTCCTCCCTTGCAAATCTCTGCCCCGAACTGCCCTGCTGCTCAATCTGCCTACTGGCACT | |||||||||
gi|34512495|gb|CF483626.1|CF483626 POL1_23_D01.g1_A002 Pollen Sorghum bicolor cDNA clone POL1_23_D01_A002 5', mRNA sequence GACAGAAGAGAGTGAGCAC EST sequence (targeted fragment marked with yellow): GATGCTCTCATATCCCGAGGTTAGTAACATGGTACCAGAGCCATGGATTAGGGTTAGGTTTAGCCTCCTCTAAATCACCCACGATCCATTTTTTTTTACTTGGGATTCGTCCGCTGTTCTTCGTTGCGGCCGTTGCCGCCCATTCATCCCGTGGCCCGTCGCCACTTCATCTTCGCGTGGCCCGTCGCCGCGCCGTCCCTCCGTGCGGCCCATCACCGCGCCCTTCTCCGTCCGCCGTCCGCCTGCGATCCGCGCGTCGGGACTCCCGTGGATCGTCCTCGTTCCGCATCCGCGGGTGGCCTGTCGACCGACCGCGCGCCGCGCCGTTCCCGTCCGCTACTTCACCCGCGGGCGGTTCGTCACGCGTCGATCGGTCTACACGCGCGCCTGCGGGTCTTCACGCGCGGAACATCACGCGCCACTTCTTCCTCCGCGGGAGTCCAGCGGATCGACAACTCCCAGCCGCCGGTCCTCTGTTCCCAGCCGCCGGTCCTCTGTTCCTGCTCCTGCTCGGGTCTGCCTGCTTCTGCTGCTGGTCATTCTCCTCTGTCAGGAAACAGAGGAAACAGAGGATACTTGTGGTGCTTCGGGACTGCAAATCTTCATCAATCCTCTGTGCTGGTGGTAACTCTTCTTTTTAACATCAACAATGTCTCAGTCTGAGAAGATTAATGCAATTGTCATCAATATTACTCTTGATGGTCCGAATTATTTGGAATGGTCCTTTTGTGTTGAACTGCATTGAGAGGTGTTGGTCTTCATTCTCACTTAACTGATGATCCACCAACTCTC | |||||||||
gi|45948447|gb|CN124703.1|CN124703 RHOH1_6_H10.b1_A002 Acid- and alkaline-treated roots Sorghum bicolor cDNA clone RHOH1_6_H10_A GACAGAAGAGAGTGAGCAC EST sequence (targeted fragment marked with yellow): AAACAGAACATGAATAAACTAAAATGACGCATAATCCATAAATGATTATACCAAACATGTGCATCCAGAAATGAAAAAATGTTACAGTTCAGTTCGCATATAAGAAGTCAAACACTCAAATACACAAGCAGTAGCAGCATGACGATTCGACTAACACAATCTAACAGCGATACAGGTAAGCATGCGAAGTGAAAACTAAACTTGATCGCAAACACATGCAACAAGAGATCATTGAGCCATTCGCTTCTTCAATGCCTGCCTCGGGTTCTCGCCCTGCTCGCCTCCTCTGGGGTCGACGGGAACAGCTCTACATACCTCGTCCCAATGGTCATCTTATCCTTGCACATGGCCGTCTTGGCAACTTCAGCAGTGGGGAACTCAACAAAGGGTTCACCAGTAGCTTTCCCATCTGAGCGGGATGCAATATGCACATTCTCCTCTGTCAGCTCATACTCCAGGAAGAACTTGATGATGTCCTCAGTGGTGGCAGAGTAGGGAAGCCCACGGAGCTTCAGCACCTCAGTGTACTCCATACTGCCCTTGTCTTCAGCCGGCTTCTTAAACCTTGGAGGAGGTGGGGAGCGGCGGTACTCTGACTCAAAGTAACCACCCTGGCTCACCTCGTTGGCTATTGCACAGTAGTACTCCTGCTTCTTGCATCTGAACACCTCAACATATCTCCGGCCCATGTTCTGCCTGTTGCGATGCAGCGCAAATTCTGCTTGCATAGCTGTTGGGAAGACCACAAAAGCCTCACCAGTGAAGCGCCCATTCTTGTTAACCA | |||||||||
gi|7660875|gb|AW747137.1|AW747137 WS1_66_A09.b1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA, mRNA sequence GACAGAAGAGAGTGAGCAC EST sequence (targeted fragment marked with yellow): TTCGGCACGAGGATGTGGACATGCAAAAGATACCAGTTCGATTTGCTATCACAAATGCTGGTCTGGTGGGATCTGAGGGCCCAACTAACTCAGGACCATTTGATATTACATTCATGTCATGCTTGCCAAACATGATTGTCATGTCACCATCTAATGAGGATGAACTTATTGACATGGTGGCAACAGCTGCAATGATTGAGGACAAACCTATTTGCTTCCGCTATCCTAGGGGTGCCATTGTTGGGACTAGTGGAACTTTAACATATGGGAATCCGCTTGAGATTGGTAAAGGAGAGATTCTTGTCGAGGGAAAAGAGATAGCTTTTCTTGGCTATGGCGAGGTGGTCCAGAGATGCTTGATTGCTCGATCTCTTTTGTCTAACTTTGGCATTCAGGCGACAGTTGCAAATGCGAGATTTTGCAAGCCACTTGACATCGATCTAATCAGAACGCTATGTCAGCAGCACAGTTTTCTTATCACAGTTGAAGAAAGAACAGTTGGTGGCTTTGGATCACATGTCTCTCAGT | |||||||||
gi|30940182|gb|CD207779.1|CD207779 HS1_34_G05.g1_A012 Heat-shocked seedlings Sorghum bicolor cDNA clone HS1_34_G05_A012 5', mRNA GACAGAAGAGAGTGAGCAC EST sequence (targeted fragment marked with yellow): ATGCCTTCGCCGACCCCGACAAACAGGAACCATCCAAACACGGGCTGAGCTATGCCGTTATCATCTCTCTCCCTCCTCCGCCACCACCCGCCGCGCCCTCTCCCGCCAACTTCAAATCGTCAGCCGCCACCGCCACACCCCCGCCTCCTCCTCCCTCCGTTCACAGGGCGCCGCGCCTTCGTCTGCCAGCCGCTCGCCGCGGCCACGGACGACATGGCTGCTGCGGCCGCGGCGGCGTCGCCCCCCACGCTGCTCGAGCACATGGGCCAGGCGGGCACGGCCGCTGACCTCACTGTCCTCGTGTCGCATATCCAGAGCGCATGCAAGCGCATCGCGGCTCTCGTAGCGTCCCCCGGCAACGCCGAGCTGTCGCGGTCTAAGGCGGGGCGTGGGACCGTGGCGGCCGGGCGTGACGCGCCTAAGCCGCTCGACGAATTGTCGGTTCGTGCTGTCTTCGCTTGTTCTTGAGTTCCTAGCCTCGTTCTCGCATTTAACCACGTGATTTTTTTTATGGATGTAACATTGTTGTGGGACTGATCTTAAGGGCTTATATGGCAGTATGGTAGTATACATAACAAAATATCCATCTGAATTCTGAAGGTGCTTGATCTCTTCTATTTTATGCTGTGTTTATATTTTTCCTTCATCAACTAACTAGTTG | |||||||||
gi|30162366|gb|CB926095.1|CB926095 ABA1_31_G04.g1_A012 Abscisic acid-treated seedlings Sorghum bicolor cDNA clone ABA1_31_G04_A0 GACAGAAGAGAGTGAGCAC EST sequence (targeted fragment marked with yellow): GTGATCTCCGTCCAACAATGAAGCAGTTGTGGAAGCCACCAATTGGCATGCTTGAAGTTGGCATTTTAAGTGCAAATGGTCTCAATCCAACAAAAACCAGAAACGACCGTGGGTCGTGTGATGCATATTGTGTTGCCAAGTATGGTTCAAAATGGGTCCGGACACGCACAATAGTTGACAACTTGAGCCCTCGATTCAATGAGCAGTACACATGGGAAGTCTTTGATCATGGAACTGTACTCACAATTGGTCTATTTGACAACTGCCACATAAGTGGAGATAACAACCACGGTTCCTCAGGCCACATGGATAAACCCATCGGCAAAGTGAGAATTCGGCTTTCAACACTTGAGACGTCGCGTGTGTACACACACTCATATCCATTGCTCGTCCTCAGCCCATCAGGAGTTAAAAAGATGGGTGAACTACATCTTGCCATCCGGTTCACAACATCATCCCTTATCAATGTGCTCTTTACATACTCTAGGCCCCTCTTGCCCAAGATGCATTATGCACAGCCTCTGTCAATAGTTCAGCAGGAAATACTCCGCCACCAGGCTGTGCAGCTTGTTGCGCAGCGCCTGTGGCGCATGGAGCCACCAGTTCGCAGGCAAGTTGTTGAGTTTATGTCAGATGCTCGCTCTCATCTGTGGAGCATG | |||||||||
gi|57806599|gb|CX607879.1|CX607879 ANR1_31_G07.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone ANR1_31_G07_A002 3', mRNA sequ GACAGAAGAGAGTGAGCAC EST sequence (targeted fragment marked with yellow): GAAGCAAATCCATAAATGATTATACCAAACATGTGCATCCCGAAAAGAAAAAATGTTACAGTTCAGTTCGCATATAAGAAGTCCAACACTCCAATACACAAGCAGTAGCAGCATGACGATACGACTAACACAATCTAACAGCGATACAGGTAAGCATGCGAAGTGAAAACTAAACTTGATCGCAAACACATGCAACAAGAGATCATTGAGCCATTCGCTTCTTCAATGCCTGCCTCGGGTTCTCGCCCTGCTCGCCTCCTCTGGGGTCGACGGGAACAGCTCTACATACCTCGTCCCAATGGTCATCTTATCCTTGCACATGGCCGTCTTGGCAACTTCAGCAGTGGGGAACTCAACAAAGGCTTCACCAGTAGCTTTCCCATCTAAGCGGTATGCAATATGCACATTCTCCTCTGTCAGCTCATACTCCAGGAAGAACTTGATGATGTCCTCAGTGGTGGCAGAATAGGGAAGCCCACGGAGCTTCAGCACCTCAGTGTACTCCATACTGCCCTTGTCTTCAGCCGGCTTCTTAAACCTTGGAGGAGGTGGGGAGCGGCGGTACTCTGACTCAAAGTAACCACCCTGGCTCA | |||||||||
gi|37705209|gb|CF756128.1|CF756128 DSAF1_3_E08.g1_A011 Drought-stressed after flowering Sorghum bicolor cDNA clone DSAF1_3_E08_A GACAGAAGAGAGTGAGCAC EST sequence (targeted fragment marked with yellow): GAAATGAATCGCGATTAAATTGAACGTTAACCAGCGCCAGGCTAAACCAACAAAAGAATAGAGTTAGCCATAGTGTAGCAGCTACGCCTGTTTACAGGAAATTACAAAAGAAAAAAAAAAGGAAAGGCCGTAGGCAAAGTGAGAGAGATATACAGCTAAGCTAGCTACATGCTCTAAACACTTGCAGATAAATCAAAGTAGCGAGGTTCTCTTTAATTTTCTGCCACTGACAGCCAGGCATCAAAGAGCCACCGGCAGTGACACGGAACCTCCAGCAACAAGAATATTGTCACGTGTGTGTCTTCTAAGCGTGCCCCCAGAGGCCTCAAATTGGAGGCCCTGCTGCACAAAAGAATCGATTAGCCAGCCACTTCCTTTGCTGCCAATTCTAAAGTCAGTCTGCTGCCCCTGTGCTAATCAAATCAGCTTTGCCCACAATCACCACCTGATCCCTCTCTTCTGTCACCTCGTTTTGTAGTTAACAATGCAACTAAACAAAGAATTCGTCTGCTCAGTAGAGGTTAGCACCTGTGATTCCCTAAAATGTACGTGGAAAACCAAGCGACAACTTGTCCTCCCTTGCAAATCTCTGCCCC | |||||||||