| mature miRNA: GAGCCAAGGATGACTGGCCGT species: Vitis vinifera database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|110398973|gb|EC965457.1|EC965457 WIN0818.C21_C23 Cab Sauv seed normalized (WIN08) Vitis vinifera cDNA clone WIN0818_C23 3', m GAGCCAAGGATGACTGGCCGT EST sequence (targeted fragment marked with yellow): GGAGAGAGGGGAGGAAGACCAGCAATGGAAAAGCTTCTCTGCTGACCAGGGTTCTCAGAGGCCACATGCCTTCCAGTGAGCCCCCTGGGAAGCCCTTGGTCATCTGGTTTTTATCCAAGGCAAATGAAAATATTCTCGGCTTTTGTTTGCTGGGCGGCAAATCATTCTTGGCTTTGCTTTTGTGCCTGCAGTGAGGGGGAAAAGGGGTTACAAGGAAATGAGTGATGGGCATTGTAGCTTATTTTGATATCTGATAGAACTTCACTCCATTCTTCCCATAATACTGTCTTCTGTACAAAAAAAGGTGGACGAACTCAAGTAGGATAAGTAGGAACAATCAATCTGTAGGGACATTCTA | |||||||||
gi|110697807|gb|EE075206.1|EE075206 C4B07815 Berries veraison stage (VvC4) Vitis vinifera cDNA clone C4B07815, mRNA sequence GAGCCAAGGATGACTGGCCGT EST sequence (targeted fragment marked with yellow): CTCATTTACTTGGAATGCATGAAGCTAGAATGCCTTTACCCCTTGAGATGACACAAGATCCTGTTTATGTTAATCCAAAGCAGTACCATGGGATTTTGAGACGAAGACAGTCCCGTGCCAAAGCGGAACTTGAAAAAAAGTTGATAAAAGTCCGAAAGCCATATCTGCACGAATCCAGACACCAGCACGCCCTTAGAAGGGCAAGGAGTAGTGGAGGCCGTTTTGCCAAAAAGAATGCAGCTGAAGCTTCTAAACACGCTTCTGAAGAAAAGGTTACAGCTTTAGGCTCAGCCCCTTCACCACAATCTGTCAGTTCATCGGGTTCAGAGCGGTTGCCATCTGACTCTACTGAAACCTGGAATTCCTCCAGTAGACAGCAAGAAGCAAGAGGGCCTCAAGCACATGACACCCATGAACCACCCAAATATAAAAATGGCAGCGGCTACTACCAAAGTCCTGGTGACTCACAGACAACAAATCATTCACACACGAGTGAGAGAGGGGAGGAAGACCAGCAATGGAAAAGCTTCTCTGCTGACCAGGGTTCTCAGAGGCCACATGCCTTCCAGTGAGCCCCCTGGGAAGCCCTTGGTCATCTGGTTTTTATCCAAGGCAAATGAAAATATTCTCGGCTTTTGTTTGCTGGGCGGCAAATCATTCTTGGCTTTGCTTTTGTGCCTGCAGTGAGGGGGGAAAGGGGTTACAAGGAAATGAGTGATGGGCATTGTAACTTATTTTGAN | |||||||||