| mature miRNA: GATCATGTTTGCAGTTTCACC species: Raphanus sativus database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|158944728|gb|EX906998.1|EX906998 RS3BO89JQ RS3(RT) Raphanus sativus cDNA 3', mRNA sequence GATCATGTTTGCAGTTTCACC EST sequence (targeted fragment marked with yellow): AGAACGCTGATGAAGAACCAAAAGTGGGAGGGCTTTCAGATTCCAAGATGATTTCTGGTGCTGCTCAGGGGTCTGAGCAAAGGCGACCATCAAACCAAGTTATGAAGTCAAACAATTCTGACAATCGAAAGCCAAATACGGAAGCTGGTTCCGGATTTGGTAGGAGTGGCCAACATGGAGAAGTCAGGAAAGGAAACTCCATGAGAAGAGTCAAGGAGAAACAGAATAAAACGTGGTGGCTTAAGCTTCCCTATGTGCTGAGAATTCTAATGCGGAGTAATATCGACCAAGAAATATCTGAGGGGTACTTTACTATGAGGACCGAACCTATGGAACAAAACAAGGGTGAAGTTTCACACATGATTGCATTTGAGGATCAAAGTGATGCAATAAACTTCTCTTATCTGCTGGAGTCAGTTTTTGAAGACTTGGATGATTTCAGCGCCAATGTAGTTCCCATATCAACCAAGGATCTTTATAACGAAGTAAGTTCTGGTGGCAAGAATGTGATTGTTGTGAAGAAGCGGCAACTAAAGCTGTATGCTGGACAACCATTTGAAGATGTTGAAAGAGCCCTCCATACTCTTATCCAAGAACAATGATATAGTTAATATTACGTAGGATCTTCCCAGGTTTCATCTGATGGCTTGTAAGGGGTGTATTTGAATGAACAAGGTGATTATATGTTTTCTACAAAAAAAAAAAAAAAAAAA | |||||||||