mature miRNA: GATCATGTTTGCAGTTTCACC species: Raphanus sativus var. oleiformis database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
Predicted miRNA targets | |||||||||
gi|156154697|gb|EW714843.1|EW714843 RS1A485TF RS1(AR) Raphanus sativus var. oleiformis cDNA 5', mRNA sequence GATCATGTTTGCAGTTTCACC EST sequence (targeted fragment marked with yellow): GAAGGAAACTCCATGAGAAGAGTCAAGGAGAAACAGAATAAAACGTGGTGGCTTAAGCTTCCCTATGTGCTGAGAATTCTAATGCGGAGTAATATCGACCAAGAAATATCTGAGGGGTACTTTACTATGAGGACCGAACCTATGGAACAAAACAAGGGTGAAGTTTCACACATGATTGCATTTGAGGATCAAAGTGATGCAATAAACTTCTCTTATCTGCTGGAGTCAGTTTTTGAAGACTTGGATGATTTCAGCGCCAATGTAGTTCCCATATCAACCAAGGATCTTTATAACGAAGTAAGTTCTGGTGGCAAGAATGTGATTGTTGTGAAGAAGCGGCAACTAAAGCTGTATGCTGGACAACCATTTGAAGATGTTGAAAGAGCCCTCCATACTCTTATCCAAGAACAATGATATAGTTAATATTACGTAGGATCTTCCCAGGTTTCATCTGATGGCTTGTAAGGGGTGTATTTGAATGAACAAGGTGATTATATGTTTTCTACAAT |