| mature miRNA: GATTGAGCCGCGTCAATATC species: Raphanus raphanistrum subsp. maritimus database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|161517759|gb|EY897646.1|EY897646 RR1DB09TF RR1(CS) Raphanus raphanistrum subsp. maritimus cDNA 5', mRNA sequence GATTGAGCCGCGTCAATATC EST sequence (targeted fragment marked with yellow): GGAGAGAGAGAGAGAGATGTCTTCAAAGGACAAGCAACCGTCGAAGCCGTCTGGTGGTCGGACCAGTGGTATCCGTACACTTTCCGATCTGAACCGAAGATCAGGACCGGACTCCGACAGTGATTCCGATGGTCCTCAAGAGTACTACACCGGCGGAGAGAAAAGTGGTATGCTAGTTCAGGATCCTTCGAAAGAACCAAAACACGACGATGTTGATGAGATATTCAACCAAGCAAGGCAACTAGGAGCGGTGGAAGGACCTCTTGAGCGTCCTCCCAGTTCCAGCAGAAGCTTCACTGGAACCGGGAGATTGCTTTCAGGAGAAAGCGTGCCAACCGCTCTTCAACCGCCCGAGCCTGTGATTCACAGTATCGTTTTCTGGTCTAACGGTTTCACTGTTGATGATGGACCTTTGAGGAAGTTGGATGATCCAGAGAACGAGTCCTTTCTCGACAGCATTCGAAAGTCTGAATGTCCTAAAGAGCTTGAGCCTGCTGATAAAAGAGCTCCTGTACATGTTAATCTTATGAGAAGAGATGAGATATGCCCCGAACGTGAGAAACCTACGGTTGCATTTCAAGGAGTGGGAAGGACACTAGGAGGTGGTGCTAGCTCATCAACCCCTCCAAGCCTAAGCAACCCAACCGATGTAGCCGCGGCTCCATCACCGTCACAGAGTCTTGTTGTTGTTGATGAAACTCTTCCATCCACATCTATCCAGCTTAGACTCGCCGACGGACACGCATGGTGGCTAAGTTCACAACCATCACACGGTCAACGACGTTCGTTC | |||||||||