mature miRNA: GCATCTTCATCATCATCGTCG species: Raphanus raphanistrum database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
Predicted miRNA targets | |||||||||
gi|161516843|gb|EY896890.1|EY896890 RR1D248TF RR1(CS) Raphanus raphanistrum subsp. maritimus cDNA 5', mRNA sequence GCATCTTCATCATCATCGTCG EST sequence (targeted fragment marked with yellow): GGCCTCCTCTTCTTCTTATTCCTCTTGCTGAATCCAAACCCCACCCAGATTTTCTCAGGAAGATAAACATCATTGAGCAAAAAGAAAAACGATGCCGTATTGCGAGGTTGCGAAAGAACACGTCGACGCAGAGACGAAGCTCAACAATGCAGGGGTGAAGATATTCTACAGAACGTACGGTCATGGTCCTACCAAATCTCTTCTCATCATAGGTTTAGCCGGAACACATGAATCGTGGGGACCTCAAATCATGGGATTAACAGGGACTGATCAACCCAACGACGAAGATGATGATGATGATGACGGAGTCGTTACCGATGATTATGGAATTGGCCAAGGCGTGGAGGTCTGTGCTTTCGATAATCGTGGTATGGGTCGAATCTCCGTGCCCTCACACAAATCTGAATACACAACAACTATAATGGCAAAGGATTCAATTAGTTTGTTGGATCATTTGGGATGGGAGAAAGCTCATGTAATTGGGCATTCAATGGGAGCAATGATAGCTTGTAAGTTAGCTGCAATGGTGCCAGAACGGGTTCTCTCTCTGGCTTTGCTTAACGTTACTGGTGGAGGTTTCGAGTGTTTCCCCAAGCTTGACAGGCTAACGCTTTCTATTGCGATACGTTTCTGGATGGCAAAGACCCCTAAACAAAGAGCTAAAGTTGATCTGGACACACATTATTCACAGGTGGGAGATCTTCAGTGTGATGTGATGAAACACTATAACAACCA | |||||||||
gi|167484524|gb|FD969041.1|FD969041 RR2H029JQ RR2(MS) Raphanus raphanistrum subsp. raphanistrum cDNA 3', mRNA sequence GCATCTTCATCATCATCGTCG EST sequence (targeted fragment marked with yellow): TAGAATGGACGCGTCAGCAGGTTCACACTTGATAGAGTTGGTGACCAAGTCCCCCTACTTAACTTCTCTAACACTCGTAGGTTTTCAACTAACCAATGAAATGGCCCGAAATCTTGTTAAGAATTCTCGAAAACTGAAGTATCTGAATTTGTCCAGATCGCCTAAAATCAATGGTCATTTTTTGAGGTATTTGGGAAATAGCTGCAAAGAGAATCCACTTAAGACTCTAATAATGCGCAACTGCGTTAAACTAGAGGAGACAGAAGTCTTGGAACTTTGTAACTCCTTAATGAAAGGAAACTTCAAATTCATTCGTCACGTTGATGTTTCCAGCTACAACGGCTTAGTTTCTGATGGTGGCGTGAGATCTAGATCTTACAACCCTACGTTACCTCTGGAGAAGCTGAAAGAAGAAAGACCAGATGTGACACTTGTGGCGGATTTTCCATTAGAAAGGTCAGGGAAGCGTTACCTTGTGGAAGGGGATGACGAAGAGCTGAGGGAGATAGAGATGATGGAAGCCAAGAACGATGAAGATGATGATGATGATGAGGACTCCTCTGATGATGACGATGACGTTTAGCTTTGATGATTGGAGGAGTTGTTAATCAATCAATCGTCTATATTTCCGGCACGACCAACATATAACTATTTTTATTATATTCTTAATAAAACCATAACCGAAGTTCCTCCTTCATACAGAACATAGAGATTTTATTACTTCATCTTATCTCTTATTAATTTCTCAACTCATCAAAAAAAGAAAAAAAAAAA | |||||||||
gi|166109179|gb|FD544035.1|FD544035 RR2FS17TF RR2(MS) Raphanus raphanistrum subsp. raphanistrum cDNA 5', mRNA sequence GCATCTTCATCATCATCGTCG EST sequence (targeted fragment marked with yellow): GGCTCTCCAAGAAAATCGAAAAATTTCGGAAAATTCTCGACTCGTCTCCGCAAGAAGAAGATGACGGGAGTTGATGATGGTAAGGAGTTCAAGGATGAAACCGTGATTCTCAGCGACGACGATAGTGAAGTGGAAGAAGTTAAAGACGGAGGAGAAGAAGGTTCCGACGAGGAACCAGAAGTCGATGGAAGTGAAGGTGACGACGATGATGATGATGATGATGATGATGATGAGGAAGATGACGACGACGAGGTCCAGGTTTTGCAGTCCTTAGGTGGGCCTCCGGTACAGTCGGCTGAAGATGAAGATGAGGAAGGAGAGGAAGACGGAAACGGAGACGACGGCGACGACGATGACGATGATGATGTGACGACGTCGACGATGATGACGAGGACGATGACGGTGAAGATGAGGAGGATCTTGGGACAGAATACCTAGTCAGGCCAGTTGGTCGGGCTGAAGACGAAGAGGACGCAAGTGATTTTGAGCCGGAAGAGAACGGTGTTGAGGAAGACCTTGACGATGGTGAAGACGACGAGAATGATGACTCGGGTGTTGCTGGAAAATCTGAGGCTCCTCCCAAAAGGAAGAGAGGAGCTGCTGATGAAGAGGAAGAGGAGGATAGTGATGATGGAGATGATGCAAGACCTCCAAAGAGGTAGTTTTCAAGGAATTATAACAACAGCACGGTTCAACAAACTGAAAGAGAGCTTTATGTTTTTTTTTCCTTTTAAGTTTGGAGTCGTGAGATTTGAATCATTGGTTGGGGTTCATGTAAGTTTATTATGGATCAAGAAGTAGGG | |||||||||
gi|161550100|gb|EY922850.1|EY922850 RR4DK18TF RR4(PB) Raphanus raphanistrum subsp. landra cDNA 5', mRNA sequence GCATCTTCATCATCATCGTCG EST sequence (targeted fragment marked with yellow): GGGGGACTGTATTTGTTCCTGGGGGGGAATCAATCATCTGATATACTCTCTATCTCTCTCTCCTTGGATCGATTTGCTACATCCGCCGTGAGAATAAACCAACCGGCGAACTCAATCAACCGGTTTAATCGGTGGTTCTGATCCGGTTATAATCGGAAGAGAGAAACAGAGAGGGAAATGAACGGTGGTGGTGATGATGAGGATGTCGTCGTCGTGGCAGCTTCTTCGGCGGACGCGTCTCCGCCTCTGCAATGGAGATTCTCTCAGGTCTTCGGAGAACGAAGCGCCGGTGAAGAAGTTCAACCAGTTGATATGATATCAGCAATCGAGTTTGATCATTCCGGTGACCATCTCGCTACTGGGGACCGTGGAGGAAGGGTTGTTCTTTTCGAGAGAAGTGATGCCAAACATAGCAGTGGAGCTAGAAGGGATCTTGAAGAGACAGATTATCCAGTGAGGCACCCTGAGTTTTGTTATAAAACTGAGTTTCAGAGTCGTGACCCTGCGTTTGATTATCTCAAGAGTTTGGAGATAGAGGAGAAGATTAACAAAATTAGATGGTGTCAAACAGCTAATGGCGCTCTCTTTCTCCTATCGACCAACGATAAAACCATCAAGTACTGGAAGGTTCAAGACAAGAAGATCAAGAAAATATGTGATATAAATGCAGATCCTTCAGAGCTGTGGGAAATGGAATTGTGGCAAACGGAGTACCTGAAGCGC | |||||||||
gi|158650712|gb|EX760603.1|EX760603 RR2CH77JQ RR2(MS) Raphanus raphanistrum subsp. raphanistrum cDNA 3', mRNA sequence GCATCTTCATCATCATCGTCG EST sequence (targeted fragment marked with yellow): CTGGATATATCCTTAAATCTCAGATGCCGGTCGAAGAAGAAATCGAAAACGAGCGTGCAAAACTGAAAACGGCAACGCAAATGACACCTGCGCTATTTATGGAGTGGAAGAGGAAGAAAATAGCTGAGAGAGATGCAGGTTTGGCTGCTTCTCAAGCCGAGAGAGCTAAGAACGACCGTATGAGTGGTCGGGAGCTGTTTCTGTCCAATGCAAGCTTGTTTGTGGATGATGCTGAGGCTTTTGAAGAGTACCAGAGGGAAAAGGAAGAGGAAGAGATTGAACAAAAGGAAAAGAACAAAGAAACAGAGGCAGGGACAAGCAAGAGCAGTGGTGATGCTGAACAGAGTTCGAAAGAAGTGGATGAAGACGACGAAGATGATGATGATGATGATGATTTGGACATGGACGAGCTTGATGAATTGGAAGCAAGCTTGTCGAAAGCTTCGATCCAGATTCGTGAGCCAAACAATGAAGGATCATCATCTTGAGATGTGTGAGAGGAAAGCACATGTTTTGGTTTGTGTACTTTCGATAATGTTGGATTGTGTACTTTCAGTTACTGTCTTCAGATTTTAAAGCTCATCAAAGACTAATACCACCACCTCTTGTTGAGCAAAAAAAAAAAAAAAAAAA | |||||||||
gi|167483915|gb|FD967922.1|FD967922 RR2GJ90JQB RR2(MS) Raphanus raphanistrum subsp. raphanistrum cDNA 3', mRNA sequence GCATCTTCATCATCATCGTCG EST sequence (targeted fragment marked with yellow): CCAGCAAGCATGGTGGCTAAGTGTGACCCGAGGCATGGGAAGTATATGGCTTGTTGTTTGATGTACCGTGGAGATGTTGTTCCTAAAGATGTTAATGCTGCTGTTGGTACTATCAAGACTAAAAGGACTGTTCAGTTTGTTGACTGGTGCCCAACAGGGTTCAAATGTGGAATCAACTACCAACCTCCAACAGTTGTTCCGGGAGGTGACCTCGCTAAGGTTCAGAGAGCAGTGTGCATGATCAGCAACAACACAGCAGTTGCAGAGGTGTTCTCAAGGATCGATCACAAGTTCGATTTGATGTACGCGAAGAGGGCGTTTGTGCACTGGTATGTAGGTGAAGGTATGGAGGAAGGTGAATTTTCAGAGGCACGTGAGGACTTGGCGGCACTGGAGAAAGATTATGAAGAAGTGGGTGCTGAAGGCGGAGATGATGAAGAAGATGAAGGTGAAGACTACTGACCCCTTTTTTTATCAAGTGATGTGTTTTTATCTTTTTGGCTTTGCTTAAGATTCTTGTTGATTACTTGTGTTTGCTTTAATCCTCGCTGAACTTTTTCCGCCTTTTGTGTTTCTTTATCGTTGGTTTAATTCATTGGTAGAGTGAGCATTGTGAGTTCCAGAGTTTTAAGCTTTTGTTGTACCAAACCTTCTTTATCATTTAAGTGTAATATTCATTTATGTCTTCCTGTAAAATATTTTCTG | |||||||||
gi|167477953|gb|FD964513.1|FD964513 RR1GR23TF RR1(CS) Raphanus raphanistrum subsp. maritimus cDNA 5', mRNA sequence GCATCTTCATCATCATCGTCG EST sequence (targeted fragment marked with yellow): GTCTAGTTTCAAGACTACTGATAATGATGCTGCAAAAGCGGCAAGAGGGATGTTGAAAACAAAGCCACCGAGGGGAGATGATGATAAGCATGTTACTCGATACAAGAAGAGAGATGATTTGGATAATAAAAATGGGGATGCGAGGGGGAGGAGGAAAAGCTCTGATGTGCCTTCTTATAAGGCTAAAAGGAAGGCGTTTGCAGAGAGGAAAGTGGTTGACGAGGGTTTGGATGGTCAGGAGGATCAACCAAGGAAGAGAAAGAGGATACGTCTTGATCCTTACGATACCTCGAACAAAAGAATAGATGATGATGATGATGATGGTGTCGTTCTTGATGTTAGCCGTAAAGAAAAGAAGAAGAACGATGGAGAGAAGAGTGTAGAAATGTCTAAAAATGCACAGTTTCGTGCAATTCAGCCTAGTCAGTCGATCCTTTCCTATGTCGAAGAAAATCTGTTGGGGCGTAGACGCTTGACTGAGCTGAAGAAGGCTGGCTACAACACAGAGCTTCCTGCTCCGTTAGATAATATCTCTCAGTCGACCAGCACTGAGAGGGAGCGCATAGAAGAAAGTCTATTTAGAACAAATTGGAGTTCTTTGCTGCGGCAAATGTTTCATCGTCATTTCCACC | |||||||||
gi|154176538|gb|EV545879.1|EV545879 RR3AX69JQ RR3(NY) Raphanus raphanistrum subsp. raphanistrum cDNA 3', mRNA sequence GCATCTTCATCATCATCGTCG EST sequence (targeted fragment marked with yellow): TTTAAAAACAATGTCTTAACAAAGTCTTATCATGTGATTGATGAGGATGGGCCACTACTTGAGAAGGCTATTGGGACTGAAATCGATTGGTATCCTGGAAAGTGTCTAACTCAGAAGATTCTTAAAAAGAAGCCTAATAGAGGTTCAACGAACGCCAAACCAACCACTAAAATGGAAGCTTGTGAAAGCTTTTTCAACTTCTTTAACCCTCCTGAAGTCCCGGATGAAGAAAGATATCGACGAGGACAGAGCTGAGGAACTTCAGAATCTGATGGAACAAGATTATGACATTGGATCTACCATCCGTGACAAGATTATCCCGCATGCCGTCTCATGGTTTACTGGTGAGGCTGTGGAAGGACAGGAGTTTGATATAGATGATGATGAAGATGATGATAGTGACGAAGATGATGATGATGATGATGATGATGATGATGATGATGATGAAGAGGACGAGGATGATGATGAGATGGAGGATGATAGCAAGACTAAAAAGAAGAAGGGAGGCAGATCTCAGATTGTTGGTGATGGTCAACAAGGCGAGAGGCCACCAGACTGCAAGCAACAGTGATCTCGATGCTCTACTGAACAAAAAAGCCATGTGTAAAAAATATATCTTGGGTCAATTCTCAGTTCATCTAGCATTGAGAATTGAAGAAAAATATTTTAGTTGTTTTTTTATAGTGTAAACCTCATTTCCTTATTGATGATGTTCTCATTCGAGTTTTGATAATTTGTTGTGGTGTTTATTTTCGTTGAATGATTTAAGACTTAATTAATACCTTGGTGTTTATGAATGAATGAAAACATCATCCCCTTGTT | |||||||||
gi|167480487|gb|FD964799.1|FD964799 RR1GU43TF RR1(CS) Raphanus raphanistrum subsp. maritimus cDNA 5', mRNA sequence GCATCTTCATCATCATCGTCG EST sequence (targeted fragment marked with yellow): GGACTTTAGTTGATTACGGCTTCATAGCTTTGCTTCTTCCATAGATGAACTCGCCGTCTCTGTTTATTCTTAATCTTCAGATTTTCTCTTCTCATCTCTTCACATTCCCTGAAGATTTCCTCTTCTCATCCCTTCAGAAGACCTTTTACCTTCCTCTTTAACATCCGTGAAGGGCTCTGAACTCCGTCGTGCCCTACGCCGTGAGCAACCCGATTTTCAGATAGTGAAGCTTGAGGGAAGTAAATATCCAAAAAGAGAGTTCTTTTTTAGGTTTGTGTATCCTTGTCTTCTCGAGAGGATGGAAGATAAGGGAAAGGGTGTGGTGGGAGAAGATGAGGAAAAGTCGTTTTCTGTGTTAGAAGGGGGTCCAAGCAATGTGGAAGTAGACGGTGGTGATGTTAGTGGTGATAACTATGATGATGATGATGATGATGATGATGATGATGATGATGAAGACGAAAACAGTGATGAAGGAGGCCAGGTACATGATGATGATGATGAGGGAGAGGGAGATGAGTCAGAAGAAGAAGAAGGGG | |||||||||
gi|158661233|gb|EX771124.1|EX771124 RR4BZ59TF RR4(PB) Raphanus raphanistrum subsp. landra cDNA 5', mRNA sequence GCATCTTCATCATCATCGTCG EST sequence (targeted fragment marked with yellow): GGAACAATCTCTCAAAAATTCAAAATCACTCGAGTCTCCGTGTTCCTCAACAAGCTCCACATCGATCTAGGGTTTCTGATTGAACAGGCGAGTAAGAAAGAAGAAGAAGAAGAAGAAGACAGAATCCGCTACAATGGGAGGTGAAGGAGAAGATCTAGAGCCGCTCTTCGATTATCACCGTGTTCAGCCGTCGAATTTCGTTTGCATTGACGACGATGATGATGATGATTCTGATGTCTCCGAGGTGGTTCCGGTCAAGAAGAGAGCAAAAGTTTCCCACACAGTAATGATTCATCTTTTTATGATTTTATTTATTTACTTTCTTACTCAGCTGTAACTCCTTCTTTTGATTTGTTTGATTTGCTTTAATATATAAAATAGGTAGTAAAGAAGGATGAAGAAGTGAAAGTGATTGAAGTGGCGGGTGATGAAGATTGGTTGTTTCCACCGCCAAAGGTTGTCTTCGATAAAAGCAAAAAGTCTGGTGAAGATTCCACCATTAAAGCTTTGAGATCGAAGAAGATGGAGCTCATATCATTCACAAAAAACGTAGTGGATGTGATGCAGGAAGCAGAGGAGTCTGCTAAAAAGGAAGCTCAAGTATTATCACTCAAACCATCTTCAGAAGCTGCTGCTGCTCAGAACCACCAGGTCCGCCTGTTAATG | |||||||||
gi|167499289|gb|FD980817.1|FD980817 RR3GT18TF RR3(NY) Raphanus raphanistrum subsp. raphanistrum cDNA 5', mRNA sequence GCATCTTCATCATCATCGTCG EST sequence (targeted fragment marked with yellow): GGACACAAATCTCAAAACACTCTTTCATTCATGAACAGAGCTTATCTCTTCTAGTCTCTCTTTCCTTTTTCTTCCGAGCTAGCTAACAAAAAGGGACATAACATAATGGAGTGGGAGGAACAAGGTTTGAGGATGTCCTTAGTGCTTGATAGCGCTTCGGTGCTAATGCTCACCGCTTCGGCTCTAACGGCTACTGTGCTTTCCTCTTTGCTAGAGCTCCTCTCTCAGGTGGCTGCCTTGAAGGGTGATGTTAAAGAGAACGGACACGAGGTTGTTGATGCAGAGGAAGGCAATGGAAACAATGAAGACGGTGATAGTGGTGATGATAATGATGATGGAGGGGAAGGGGAAGAGGAAGAAGGTGGTGATGCAGAAGAAGTAAAGGAGACAAAGAAAGGATCTGCAAGTGGTCCTGGTGAGAATGGTGAAGCTGGAGATGGTGATGATGACGATGAACCTGAACAGGGTGACGACAGTGATGATGATGATGGCAATGGGAACAATGATGATGATGATGAGGAAGAGGAGGATGAAGATGGTGGTGAAGAAGATGAAGAAGAGGTGGAGGAGGAAGAAGAGGAAGAGGAAGAAGATGAGGACGAAGAGGCGCTACAGCCACCAAAGAAGAGGAAGAAGTAAACAACCCAACCGTTTTGATCTTCTAACATTTTAGATTCAAAAAATCAAAAACTTCTTGTGGTTTTCTACCCGAAGAGAATCTTAAAGTATCACCAGCTTCTTTAGCTTTCCACTGTAATCTCT | |||||||||
gi|167477709|gb|FD966189.1|FD966189 RR1HA20TF RR1(CS) Raphanus raphanistrum subsp. maritimus cDNA 5', mRNA sequence GCATCTTCATCATCATCGTCG EST sequence (targeted fragment marked with yellow): GGAAGCTATTCAGGTTCCCCTCTCTCTCCTCCCCTATGCTTTCTGTCTCCTCATCTCTTACAGTGACTCCTCTTCAGGTTCAGCTTCAGTTTCGAGTAGATATGGAAGTGGTTGCCGCTAGGTCAATGGAGGAGACGCAGAGACAGCAGACATGGGCTTGTTCTGCCACTGAGACGCTTCTCATCCTCCTTGGAAGGAACCTGGCTTGTCTCCTCCTCGCGGCGGAATCTTTGCTGATTGGGTTGATTGCTGAAGATCAGAGGCTTTCTGTGAAGAAGGGTTACAAAAAAGGACGCCCTGATGAGGAAAACAAAGATGGCAGCGACTCTGACGATAACGATGATGACGATGATGAAGACGCTGACGCTGATGATGATGACGACGACGATGACGCTAATGATGAAAATTTCTCTGGGGATGAAGAGGGTGAGGAAGCTGATCCTGAGGACGACCCAGCGCCCAATGGTGGAGCAGGAAGCGATGATGATGACGATGATGATGGTGATGATGAGAGCGATAGTGATGATGATGATGACGACGAGGATGAGGAGGACGAAGATGATGAGGAGGAGGAAGATGACGAGGATGTTTGCCAGCCACCTGCTAAGAAGAGGAAATGAAACATGGGATTAAGTGGGGGAGTGTTATGTGTGGGTGGTTAAAGACTTGAA | |||||||||
gi|167485766|gb|FD973706.1|FD973706 RR2H475TF RR2(MS) Raphanus raphanistrum subsp. raphanistrum cDNA 5', mRNA sequence GCATCTTCATCATCATCGTCG EST sequence (targeted fragment marked with yellow): GGACGAATCTTCAACACACTTATCATCATGACTACCGAAGAGAAAGAGATCCTCGCCGCCAAACTGGAAGAGCAGAAGATCGATCTTGATAAGCCTGAAGTTGAGGACGTTGATGACAACGAGGAGGATGACTCCGAAGACGATGGTAATGATGATGATGCAGAGGGACAAGAGGGAGGCAAGTCAAAACAAAGCAGAAGTGAGAAGAAGAGTCGCAAAGCCATGCTGAAGCTTGGGATGAAACCTATCACTGGTGTCAGCCGTGTCACCGTCAAAAAGAGCAAGAACATCATGTTTGTCATATCAAAACCTGATGTGTTCAAGAGCCCGGCGTCAGACACGTATGTGATCTTTGGAGAGGCAAAAATCGAGGACTTGAGCTCTCAGCTCCAGTCCCAGGCTGCAGAGCAGTTCAAGGCTCCTGATATCAGCAACGTTGTCTCGCAGGGTGAATCTTCCTCGAGTGCTGCTGCAGTTGTGCAAGATGATGATGAGGAGATTGACGAGGAGGGTGTTGACTCAAAGGACATTGAGTTGGTGATGACCCAAGCAGGAGTTCCTAGG | |||||||||
gi|161515378|gb|EY895321.1|EY895321 RR1DW52JQ RR1(CS) Raphanus raphanistrum subsp. maritimus cDNA 3', mRNA sequence GCATCTTCATCATCATCGTCG EST sequence (targeted fragment marked with yellow): TTTTTTCAGAAAAGAAAATAGTGGAAGAGGAAGAGGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGAAGAGTAGACAGAGTGTTGAAGAAATAGTGAAGATAATAGAAGAGGGGAGAAAGGATGTGAATGGTAAGAATGATGCTAATGGTGGATTAGGGTTAATAGATGGAAGCATGATTGATTTTGATGATATTGATGATGAGGTGGATGATGATGATGAAGATGAGAAAAATGGGGATTTTGTATGTGCTTTATGATTTCATATCCATACTGCATGTGTGGGTATGTTCATGCATGTATTTTTTAT | |||||||||
gi|161537054|gb|EY909077.1|EY909077 RR2EE85TF RR2(MS) Raphanus raphanistrum subsp. raphanistrum cDNA 5', mRNA sequence GCATCTTCATCATCATCGTCG EST sequence (targeted fragment marked with yellow): GGGTGTAGTAAAAGGTCTCATCAATAACCTCCTGAGATGAAGCGTGAAGGCAAGCAACACGGTATGGTTAGAACCTACAGGATCCTGCCTCCGTCGCTGAATCCAAGACCGCAAGCCAAGTTGGTCAACCCTTTGACCTGTCGTCCAACCGCCGGGCTATTCACCAAAGTGTCACCTAAGCCGACCAATCACTCCAAGTTCACCGGAAAATGTGGCCAGGCAAGGTGCCTTGAGTGCCATATGTATCCCATCACCAAGTCCAAAGTCAAAAGTAAAGGCTCTTCTAAGGTGAGATCAAATGATATCACTTACAAGATGCTGACTTGGCAGGTTGCTTCTGGTGGGTCAAGACCCGGTTTGAAGCTTTCCGGGTTCTCGGCTACTGGACTTCTTGATCTTATGTCTGATGATTATGATTATGATCATGATTATGAATCTGATGAAGAAGAAGAAGAGGGAGAAGAATACACAGGATGTGTTGTAGAGGAAATAGTGAATATACAGAGTGATGGTGATGGTGAAAAGGAAGAAGATGGGTCTCTTGATGATGATGTTGATGATGATGATGATGATGATGGAAGGATGAGTTTTTGTGATGTGGGGTGATGATGATGGTTGATCAAGTGGAAGTA | |||||||||
gi|166120491|gb|FD552760.1|FD552760 RR4EL38JQ RR4(PB) Raphanus raphanistrum subsp. landra cDNA 3', mRNA sequence GCATCTTCATCATCATCGTCG EST sequence (targeted fragment marked with yellow): CAGCAGTGCTCAGCTCTGAGGTGACAGTTGTGATCCGAGAGAGGATGAAGGTGTTGTGGAGACAGATGCAGGCAAACCGAAGCTTACTTGCCCGTTATGCCGTGGAGATATAAAAGAATGGGTAGTTGCTGAGCCTGCTCGATGTTTCATGAACGCGAAACATAGAAGCTGTTCTTCCGAAACTTGTGAGTTCAGCGGAACCTACTCTGATTTGAGAAAACACGCGAGGCTGCTGCATCCGGGAGTGAGGCCATCAGAAGCTGATCCGGAGAGGCAGAGAAGCTGGAGGAGGCTAGAAAGGCAGAGAGACTTGGGTGATTTGCTTAGCACACTACAGTCTTCTTTTGGAGTAGGAGGAGGAGAAGAAAGAAGCAGCAGCAGCAACGAAGATGGGATCATGTCGTTTGATGATGGTGGTTGGCTTACAGTGTTCTTCCTCATCCGCGTGTTTAGGCCAGAGTCAAGTGGGGTAAGGAGTAGTAGTAGCAGCTGGTCAGGTACGTCTAGAGCTAGGTCACATATAGGTGTGAGGAGAAGATCTTCAAGGCTTTGGGGAGAGAGCTATGAAGGTGGTGATACAGGAACATCAGCAGCTAGAGATGGGGAGAACAATAATCAGTCTTCTGATGGACAAGAGTCTGGAACTCAAAGACGCCGTGTCAGAAGAAGATATTACATTGAGGATGATGATGATGATGATGAAGAGGCGTAATGGCTCTCTCTCAAAACATACAATTTGGTTTTTTAACTCTATGAAACAAAAATATTGGGGGAAACTTTGTATTAATAACCCCCAACTCGTTAAAACCTATTCTGTAAAATTTCTTTGCAGATTGAAAAATGTTTCTATTGAGAAACAAAATGCTAAAAAAAAAAAAAAAAA | |||||||||
gi|158649076|gb|EX758967.1|EX758967 RR2BS19JQ RR2(MS) Raphanus raphanistrum subsp. raphanistrum cDNA 3', mRNA sequence GCATCTTCATCATCATCGTCG EST sequence (targeted fragment marked with yellow): AGCTCCGCCAAATCGCCTCTTACCGCCGCGCTCACGGCTCTGTTCTCGTCGTCGGAGCTATCCCAATCAGGGAAGTATGTATGTTCCAAACGAACAAGCAAGGAGTCGCCACTGAGATTGACTGTCTTCTTCTCCACGAGGAAGCTCAGATTCCACTAGGGTTAGAGAGTCTAAGTATACGCGTTGTTCGAGTTAGTTCTTTAGTGATGAAGAAACTCTCCGGAGTGCGGTCTACTGAATCTGTTGAAGCCGTTGCCTTGATGAGAATCCCTAGCAGCTTCATCGATCTTGAAGATGATGATGAAGACGTGATCATAACAAGAGATTGTGAGAAGTGGTTCCCTTCTGCTCACCGAGTTCTTGTTCTTGACAACATACAGGACCCTGGGAACCTTGGCACGTTAATCAGATCAGCTATGGCTTTTAATTGTGATGGAGCATTTCTGCTTCCGGGTTGTTGTGATCCATTCAACGACAAAGCTCTGCGAGCAAGCCGAGGTGCTTCCTTTCAACTCCCATTAGTTTCTGGTAACTGGAACCACCTTCAGCTTCTACAACGTGAGTTTCAGATGAAGCTATTGGCTGGTCATCCAGCGAGTACTACTACTAAGAAACCAGTCTCCAAACTTTCCTTAGAGTTTGCTCAATCTTTAGCAGACAAGCCTTTATGCTTGATCTTAGGTAGTGAAGGGCAAGGTTTGTTTGAGCAATCACGACAAGTGTGTGAGCTTGTGAGCATTCCCATGGAAAGTGAGTTTGAATCTCTTAATGTATCGGTTGCTGGTGGTATTTTCTTATTCATGCTTCAATAAATATATAAAAAGTTGACCACTTATAAAAAAAAAAAAAAAAAAAAAA | |||||||||
gi|158650470|gb|EX760361.1|EX760361 RR2CE26JQ RR2(MS) Raphanus raphanistrum subsp. raphanistrum cDNA 3', mRNA sequence GCATCTTCATCATCATCGTCG EST sequence (targeted fragment marked with yellow): GGATAGTCTCTTTTCTAGGGTTTAAGGTTTCCGCACAGTTCACGAATCTTCAACACACGTATCATCATACGACCGAAGAGAAAGAGATCCTCGCCGCCAAACTGGAAGAGCAGAAGATCGATCTTGATAAGCCTGAAGTTGAGGACGTTGATGACAACGATGAGGATGACTCCGAAGACGATGATAATGATGATGATGCAGAGGGACAAGAGGGAGGCAAGTCAAAACAAAGCAGAAGTGAGAAGAAGAGTCGCAAAGCCATGCTGAAGCTTGGGATGAAGCCTATCACTGGTGTCAGCCGTGTCACCGTCAAAAAGAGCAAGAACATCATGTTTGTCATATCAAAACCTGATGTGTTTAAGAGTCCGGCGTCAGACACGTATGTGATCTTTGGAGAAGCAAAGATCGAGGACTTGAGCTTTCAGCTCCAGTCCCAGGCTGCAGAGCAGTTCAAGGCTCCTGATATCAGCAACGTGGTCTCACAGGGTGAGTCGTCCTCGAGTGCTGCTGCAGTGGTGCAAGATGATGATGAGGAGATTGACGAGGAGGGTGTTGACTCAAAGGACATTGAGTTGGTGATGACCCAAGCAGGAGTTCCTAGGCCAAGAGCCGTGAAGGCGCTTAAGGCTGCTGATGGGGATATTGTCTCTGCCATCATGGAACTTACCACCTAAATCAGAATCGTTTCAACTTAATGTGCGTGGGTCAGAGTGATTCAGAAATTTTTGTTTTTCATGTTTCCTTGAAGTGATTTTCAGTGTTGTATCAGTAAAAAACCTCATAGATTATTGAATTTCAGTTTGATTTGGTTTTGAAAAAAAAAAAAAAAAA | |||||||||
gi|166128083|gb|FD557263.1|FD557263 RR4EU57TF RR4(PB) Raphanus raphanistrum subsp. landra cDNA 5', mRNA sequence GCATCTTCATCATCATCGTCG EST sequence (targeted fragment marked with yellow): GGAGCCGAACTCAACAACAAAAGTAGACAAGAGTCTTGGTAGTAAGAATCAGAAGGAAGGCAAAAATGGTTCGCAGCATAAACCCTAAGAAGGCAAAGAGGAATAACAAGAAGAAGGGAGAAGCGTCTTCGTCTTCGTCGGTACCATCGATGCCAACAAGGGTATGGCAGCCAGGTGTGGATAAGCTAGAAGAAGGAGAAGAGCTTCAGTGCGACCCTTCTGCTTACAATTCCCTTCATGGCTTCCATGTTGGTTGGCCCTGTTTGAGTTTTGACATCTTAGGTGATAAGTTGGGTTCGAATCGAACTGAGTTTCCTCACACCTTGTATATGGTGGCTGGGACTCAGGCTGAGAAAGCAAATATGAACTCCATTGGATTATTTAAAATCAGCAACGTATCTGGCAAGAGACGCGATGTAGTGCCCAAGAAGGTAGTGAATGGTGATGATGATATGGAGGATGAGGATGATGAAGATGAGGACAGTGACAGCGATGAGGAAAGCGAAGATGGAGCATCCACTGCTCCAGTTAT | |||||||||
gi|166128089|gb|FD557269.1|FD557269 RR4EU63TF RR4(PB) Raphanus raphanistrum subsp. landra cDNA 5', mRNA sequence GCATCTTCATCATCATCGTCG EST sequence (targeted fragment marked with yellow): GGACTTCACCGGATCCAAGCTATTCAGGTATGGAAGTGGTTGCCCTCAGGTCAATGGAGACGCAGAGACAACAGTCATGGACTGAGACGCTTCTCTTCCTCGTTGGAAGGAATCTGGCTTGTCTGCTCCTCGCGGCAGAATCTTTGCTGATAGGGTTGATTACTGAAGATCAGAGGCTTTCTGTGAAGGAGGGCTACAAAAAAGGACGCCGAGATGAGGAAAACAAAGATGCCAGTGACTCTGATGATGATGACGATGATGATGAAGACAACGTTGATGAAGACGATGATGATGATGATGATGCTAATGATGAAGATTTTTCAGGGGATGAAGGAGAGGAAGGTGATCCGGAGGATGACCCCGTGACCAATGGTGGAGGAGGTAAGGATGATAATGACGATGATGATAACGACGGTGATGAGAGTGAAGATGACGATGAAGATGATGATGATGGAGATGAGGACGACGAAGATGAGGATGAGGATGATGAGGATGAAGATGTCCGC | |||||||||
gi|154168889|gb|EV540163.1|EV540163 RR2A793JQ RR2(MS) Raphanus raphanistrum subsp. raphanistrum cDNA 3', mRNA sequence GCATCTTCATCATCATCGTCG EST sequence (targeted fragment marked with yellow): GATTGATATTGTCGAGAAAGGTGATAAGCTTCAGCTGATTGAACAAGAAGAAGAAGGGATGTGCAATTCAGAGTGCAAGACGATCGAGGCCGCTTGTCAAAAGGTCATTGGTTACTCAGACACTGATGTTGCGGAGTATATATACAAGTCTAAGCCTGATCTTGCTTCACTTGTTTACCATCTTTGCAAAGACCTTACCGATGCTTGTACCAAGACCCCTCCTCCTCTTCCCAAGGATCGAGTTCCTGGAGAACCATTTGTGGCAAAACCATCGAAAGATGCTGAAATGGACAAGATCATGAGATCTATGCAGGGCATGCCAGGAGCACCTGGCATGAAGGTATACTCTAGGGAAGATTTAGAGAAGTACAAAGCAAACCCTGAAAAATTCGGTACTGAAGATGAAGGTGCTGACGACGATGATGAAGATGAGGAAGAGGACGACAAGTTCCCCAAGAACTTGGGAAAAGTTCTGAGAGAGAAAGAGAATAAAAAGGAAGAGTGGAAGAAGACAGTCACTAAGCTACTCAAGAAGAAAGGTGAGTCTCTGAGGGGAAAGATGAAGATGGTGTCGAACCGGGCCAGGAGATGGTGGAAAGGATCCTCTTCTTCGAAGAAACCTAAATCCGGGAAATCTGAACTATAGGAGGATATTCAAACTTGCTCTTTGTTTTAGCTGTCTTTGTTTAGTTTCTTATCTATCTTTGAGAGACATCAGTGTTCTGTAAACACGAAAAAAAGGAACATATAAATGTAATGGTTTTAGATCAAAATCATGAATTCAAGTTTGAAGC | |||||||||
gi|166118794|gb|FD552224.1|FD552224 RR3FU39TF RR3(NY) Raphanus raphanistrum subsp. raphanistrum cDNA 5', mRNA sequence GCATCTTCATCATCATCGTCG EST sequence (targeted fragment marked with yellow): GGGGTCTATCTGATAGTGATTTCGAAACTGAAGATGATGAAAGTGGAGGAGAGGATGATAGTGAGGAAGATGGGGATGAAGGAGAAGACGATGAGGAGGGATGGGTTGCTGTTCTAGAGGATGAAGATGAAGACGAAGATGATGATGATGAGGATGACTATGATGATGATGATGATGATGAAGATGACGACGAATCGCTTGGTGACTGGGCAAAACTGGAAACAATGAGGAGCTGTCATCCCATGTTTTTTGCAAAGAGAATGTCTGAGGTGGCTTCAAATGATCCTGTAGATTGGATGGATCAGCCGTCTGCTGGGCTTGCCATCCAGGGACTGTTGAGTCATATCTTAGTGGAAGATTATTCAGATATCCAACAGAAACTTGCTGACATAAAATCTACAAGTACCATGGGAGACAAGAATGCTGAAGAGACTGAGTAGGCAGATGGTGATGATGAATCTGAGAAGACGAGAAAAGTGGTTGCGTTTTACAAGCTGGAGATGATAAGAGTTCAACTTATTACAGCGCAAGGGGATCAGACTGAAGTTGAAGTGGAAGATGTCAGAAAAGCACAACCTGATGTTATTGCTCATGGATCAGCTGGAATCATAAACCGTTTACAAGAAGCTGGTGATAAACTAGCTGAAGCACTTAGATCTTTGTGTTGGAGATACTACAGTATTCAAGCAGAGAAGTGAAGCTGATAGGTT | |||||||||
gi|167495110|gb|FD982079.1|FD982079 RR3H803TF RR3(NY) Raphanus raphanistrum subsp. raphanistrum cDNA 5', mRNA sequence GCATCTTCATCATCATCGTCG EST sequence (targeted fragment marked with yellow): GATGATTATGATGATGATGAGTTCGATGAGGATGATGAAGATGATGGTGATGATGATGATGAATTGGGAGGACATGGTCATGGAAGTGGAGGAGGAGGTAATCATCACATCCCTCCTAACAAGATGCCTCAAATGGGTGGTGGAGCTAAGGGACCTAATGAGATTACGATGATGATGAATGGTCTCAAAGCCGGTGGTGAAGGCGGTGGCGGAGGAGGAGGTGGTGGATTTGAGATTCCGGTGAAAATGAAGGGAATGGATGAGGGTAAGAAAGAAGGGAAAGATAGTAAAGGAGGTGGGGGTAAAACGGGAAAAGCAGATGCCAAAAGTGGTGGTGGCCTTTTAGGATTTTTCAAAAAGGGTAAAAGTGAAAAAGGAAGTGACAAGAAGGGAGGTGGTAAGAAAGAAGACGGCGGAGGTGGTAAGGTGAAAGCCTCCGGTGGTGGGGGAGGAGATGAAGTTCATCAAGATGATAATGGGCCTAAAAAGGGAGGAGGTAAGTCGAAAGGAGGAGCCCATGGGGCCCATGATATCGATGAGATCATGAAACATGTCAAAGCAGGCGGAGGAGGTAACAAGGTGAAGGGGATGGGTGGCCCAATTGGTCAAGGAGGTCCCATGGGTATGATGGCTCCAATGGGAC | |||||||||
gi|167492759|gb|FD977495.1|FD977495 RR3H487JQ RR3(NY) Raphanus raphanistrum subsp. raphanistrum cDNA 3', mRNA sequence GCATCTTCATCATCATCGTCG EST sequence (targeted fragment marked with yellow): AAGAAGGTGCTTGAAGTAGCTGTTGAAAAGGGGATGCAGCATAGTCAGAAGATCACTTTCGATGGACAAGCAGATGAAGCGCCTGATACGGTCACTGGAGATATAGTGTTCGTCATACAGCAGAAGGAGCACCCAAAGTTCAAGAGAAAGGGAGAAGATCTCTTCGTCGAGCACACCCTCTCTCTAACCGAAGCCCTCTGTGGCTTCCAGTTTGTTTTGACCCATTTAGACAAAAGACAGCTTCTCATCAAATCCAGTCCCGGGGAGGTTGTGAAGCCAGATTCATACAGGGCGATAAGTGACGAGGGAATGCCAATGTACCAAAGGCCCTTCATGAAGGGTAAGCTTTACATCCACTTCACGGTCGAGTTCCCTGAATCGCTGACCCTGGATCAGACAAAGGCCATCGAAGCGGTTTTGCCGAAGCCCAAGGCGGCTCTGAGCGACATGGAGATAGACGAGTGCGAGGAGACGACGCTGCACGATGTGAACATGGAGGATGAGATGAGAAGGAAGGCCCAAGCGCAAAGAGAGGCTTATGATGACGATGATGATGAAGAAGGCCCGGGCGGTGCTCAGCGTGTGCAATGTGCTCAGCAGTGATAATATCGACATGCGCTCTTTGTAGTGATATTCAGCATTTGCGTTTTTAAAAATTATATGTATTATTTTTGGTTTCTTTGCTATAGACATTTACCCGATTCTGTTGGAAGAAACTTGTCCTAATTCAATTTCTTTTTACTTTCAGAATAAACTTTTTCTAGTTCTTGAAAAAAAAAAAAAAAAAA | |||||||||
gi|154169071|gb|EV540345.1|EV540345 RR2AA86JQ RR2(MS) Raphanus raphanistrum subsp. raphanistrum cDNA 3', mRNA sequence GCATCTTCATCATCATCGTCG EST sequence (targeted fragment marked with yellow): CAAGGTCATTGGTTACTCAGACACTGATGTTGCGGAGTATATATACAAGTCTAAGCCTGATCTTGCTTCACTTGTTTACCATCTTTGCAAAGACCTTACCGATGCTTGTACCAAGACCCCTCCTCCTCTCCCCAAGGATCGAGTTCCTGGAGAACCATTTGTGGCAAAACCATCGAAAGATGCTGAAATGGACAAGATCATGAGATCTATGCAGGGCATGCCAGGAGCACCTGGCATGAAGGTATACTCTAGGGAAGATTTAGAGAAGTACAAAGCAAACCCTGAAAAATTCGGTACTGAAGATGAAGATGCTGACGACGATGATGAAGATGAGGAAGAGGACGACAAGTTCCCCAAGAACTTGGGAAAAGTTCTGAGAGAGAAAGAGAATAAAAAGGAAGAGTGGAAGAAGACAGTCACTAAGCTACTCAAGAAGAAAGGTGAGTCTCTGAGGGGAAAGATGAAGATGGTGTCGAACCGGGTCAGGAGATGGTGGAAAGGATCCTCTTCTTCGAAGAAACCTAAATCCGGGAAATCTGAACTATAGGAGGATATTCAAACTTGCTCTTTGTTTTAGCTGTCTTTGTTTAGTTTCTTATCTATCTTTGAGAGACATCAGTGTTCTGTAAACACGAAAAAAAGGAACATATAAATGTAGTGGTTTTAGATCAAAATCATGAATTCAAGTTTGAAGC | |||||||||
gi|167506331|gb|FD988537.1|FD988537 RR4GO15TF RR4(PB) Raphanus raphanistrum subsp. landra cDNA 5', mRNA sequence GCATCTTCATCATCATCGTCG EST sequence (targeted fragment marked with yellow): GGACGCATCTAGCCCTCTAAACTCACCGATATCACAAGCAAGCCAAGGCCATGATGATGAAGATTCTGTTGTTCCCGTCGTAGAAGAGGAAGATGATGAACCCTCCTCCACGCTGAATCAGTCATTTCCGTGTTGGGTGATCGAGACTGCCAAGAAGCGTTTGAAGGACTCAAGATTTTTCGAGAGGGCGTCCTGTAATTACGTGAGTAGTACAAGGGTGTTCTGGTCATTGACCCTCGTTTGTGGTTTCTCCCTTGTCTCGAGCCTTGTTTATGTTAAGGTCGTGAGATGGTGGAGACGATTACAAGAAGAGAAGCTGAGGTTTCTGCTTCTTCAGCTTAGAGAGAAAGATCAGAAAATAAAGGAGCTTATACTTGAAATCGGGAGACTGAACGAGTCATTATCATCAAGACGCAGAGTTCGAGTGGTTCGAATCATGTGACGAGACCAATATATTTGTGTAGTAGAACATTGGCTATTTGTTGTGTGAAGTATACAGATTATGGACATATATTGTCCATGTATATGTAAGAATATATATAAAAATCAAAGGAAAATAGAGTGAAAAA | |||||||||
gi|166097411|gb|FD529084.1|FD529084 RR1EN67JQ RR1(CS) Raphanus raphanistrum subsp. maritimus cDNA 3', mRNA sequence GCATCTTCATCATCATCGTCG EST sequence (targeted fragment marked with yellow): ATGATGATGAGATTGATGATGATGAAGATGACGAGGAAGATGATGAGGATGATGATGATGAGGAAGATGACGAGGATGAAGAGGCAGAGCAAGGAAAGAAGAGCAGAAAGAAGTCATCAGCTGGGCACTAGGTTTAACGATCACTCAAATCTCAACCGTAGGATCTCTTTCTTGTTGAATATTTTTAAGGGATGTTGATAAACCTGAGGCTCTTTTCTCTTTGAACAGAAGTCTGGAAGAAGTCAACTTGCTGAAGGTCAACAAGGTGAGAGGCCTGCGGAGTGTAAGCAGCAGTGAGTAATGATGAAGAAGAGTCAGTGAGGTCTTTTGTGTTTTCTTAATTTAAGAGTCATGGTCCGGTTTATATGATATAAATCAAGTTTTGGGTAGTGGTTTGCTTGAAAAAAAATGTTCTGTGGTTTGGGTTTTTGGTTGCGTCTGATTTTTTTTCATTTTTAATGTGTTGTTCTTCATGAACTGGTTTGAGCAATAGCATTTTGTCGTTGGCCAAAAAAAAAAAAAAAAAA | |||||||||
gi|166098202|gb|FD531165.1|FD531165 RR1FJ41JQ RR1(CS) Raphanus raphanistrum subsp. maritimus cDNA 3', mRNA sequence GCATCTTCATCATCATCGTCG EST sequence (targeted fragment marked with yellow): GTGTCAGACACGGTGGAGGGAAGAGGTGCATGTCTGAAGGATGCGGGAAAAGCGCGCAAGGCAGTACTGACTTTTGCAAGGCGCATGGAGGAGGGAAGCGTTGTGCGTGGGGTCATCCCGAGACTGAGTACGCGGGTCAATCTTCTTCTGGTCCTTGTAGTTCGTTTGCTAGAGGTAAGACTGGTCTCTGTGCGCTTCATAACAGTCTGGTTGAGGATAACCGGGTTCACGGAGGAATGACTGTAACTTCGGAGAGCCAAGAACCGAGACGAAGCAGCAGCGAGACAGAGAACGAGGAAGAGTTTAGTGGCTCTCAAGACGTGATGAACATGGATAGGATGAAAGGGAGAAGCGCTGTTGGGTCTCCAGAGACTGATATTGATCTCAATGAGAATGAAAGAGGATTGGGGTTGGCTCCAGAAGGAAGAGTCCATGGTGGAAGTTTGATAATGGCCATGTTGGCTGGTAGAGAGGGTGGCTCTGGCTCAGGTTCTGGTTCAAGAAACCTGCCTAAGGGGTGGATGTAAGTTAATATTGTCTTCAGTTTGCTTCCGGTCTTAATTCTGCACGTGTGGAGTAGTATGTTGGCACGTGATAGTGAAGGTGTTACGAGTCTTGTGTTTGTTCTTGTTTAGGTTTGTGCTTAGAGACTACAAAAGGGATCAAAGTCTCTATTCTCTGTCTTATTTGCCTGTAGATATTGAATTTATGGGTTCACGCAAGGTTATTGTGAATTGTCAAAACAGTCTGTCTTATGATGACGATGATGATGATGATGATGATGAGAATAAAGTCATGTCTTTGTTTGCAAAAAAAAAAAAAAAAA | |||||||||
gi|158654678|gb|EX764569.1|EX764569 RR3CH04TF RR3(NY) Raphanus raphanistrum subsp. raphanistrum cDNA 5', mRNA sequence GCATCTTCATCATCATCGTCG |