| mature miRNA: GCCAAGTATCTTGGTTTTGCA species: Lactuca sativa database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|83983091|gb|DW129200.1|DW129200 CLSX5986.b1_C10.ab1 CLS(XYZ) lettuce sativa Lactuca sativa cDNA clone CLSX5986, mRNA sequence GCCAAGTATCTTGGTTTTGCA EST sequence (targeted fragment marked with yellow): CACAAGAATACGTTTTTTCGTTTTCAATTTCTCTGGAACCATGAATCGCTCGTCAAATGTGTTGATCTTTATTTCTTTCTTCTTTTTATCATTCACCGGAAATTTAAATCTCGTTGACGCTGGTGATACAGCCTCAGTTATATTGAATTCAGGAAATTTTGAACAATTGGTTATGCAAAGTAAAGATGTTTGGTTTGTCTTGTTTGGAGCACCCTGGTGTCCATATGTTAAACAACTTAAACCTGAGTGGGACAAGGCTTCAAAGGCTTTGGAAGGAAAGGTCAAGTTTGGTGAACTTGACTGTGATGTGGAAAATGATATACAAGCAAGGTTTGGAGTAACTGGGTTCCCGACTGTTTTTGCATTTGGTCCAGATAAATGTGCACCTCCCAGCGGACTAACCGAAAGAACTGCAGACGCACTTGAAAAGGCTGGCCTGTCTTACTATGACAAAGCACAGGGGTGTAAAATGGAGTTTTGAGTCGAGGATTGTATTCGAATAAGATTTGTTTGACTTGTTATCGATATGAAACAATAATGGCTCCTTTAACCCTGGTGTAAAGAGCTAATAAAGAGTAATTTTAATTTTGATCTCCGAAACCAAAGCCGAAGCTCCTGCATGTGATCCTCGGGACTCAAATTGTGTGGTAAACCCCTCCAGAAAGAACCCGCTTGTCATAGAAGGGGGTATAGATAATAAGGAGGCGGAAAAATAAAAAGAAGATGACACCCCTGAGATAATATAGTTGGTTACAGGAAGATGTCACGTTGA | |||||||||