| mature miRNA: GCCTGATACCTATAGGTATCAG species: Oryza sativa database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|89174227|gb|CI042120.1|CI042120 CI042120 Oryza sativa (japonica cultivar-group) callus Oryza sativa Japonica Group cDNA clone GCCTGATACCTATAGGTATCAG EST sequence (targeted fragment marked with yellow): TTTTTCAAAAGAATAAATGATCTCCCGAACAAATTCCCAGTCTCTTAGCCAAAAAACACTAATATAAGATTCAGTGGGAAAAAAACATCCTTTTACAGTTTACTGAATACATCCTAATGAAATATGCCAAAACTACAAGAAATGCAGGTTTGGCTATACCAGCCCCTATCAATGGCAATGCCAGCTAATTAAAATACATCACAATGTATTTTGAGGATAACTTAAAGCCGTACGACAAAATTTTGGTACCAATCCAGAGATGCAAGCAGTTCTCTTGCTGGATGAGATCTGCTATGTTCCAGCTCGTCAGTATTCACCAGCTATCAGGGCAGACATCACATCATGAAAAACTTGCTGAGACTGTATATTCCCCATGAAATTTTCTCATCAATCAAGAAATTCCAGACCGGTAGCTGTAGGTGTCAGGCCATGGTTAGCCAAATATCGGTCATTGAAGAACTTACTTAGATGCCTCATCCCACTGTCACAGAGAATGGTCACAATGGTATGTCCTGGACCTAAATCTTGAGCAACTCTTACAGCACCAACACAATTCATGGCTGAAGAACTCCCAACG | |||||||||
gi|88731855|gb|CI753365.1|CI753365 CI753365 Oryza sativa (japonica cultivar-group) library (Kikuchi S) Oryza sativa Japonica Gro GCCTGATACCTATAGGTATCAG EST sequence (targeted fragment marked with yellow): GTTGAATAGGAGTATATAACCCATAATTATCAGAATTAGTGGTATCACATCTAAAGTCTGGTACCATCACACCCTATATCTGGTATCAGATCCGCTACTAATATGTATTAGACCTGACCTAGATATCGAATCCAGTACTCATAGGTATTAGACCCGATACCTAGGTATCAGACTTGGTATTCATAGGTATCATACTCGATACCTGGGTATCTGAACCGGTACGTATAGATATCAGACCCAATACCTAGGTATCGGAACCGATACTCATAGGTATCAGATCAGATACTCGATACCCGGGTATCCGATCCGGTACTCAAGGTATCAGACGCGATNACTAGGTATCGGATCCGGTACTTATAGGTATCAGACCC | |||||||||