miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse




mature miRNA: GCCTGGCTCCCTGTATGCCA
species: Oryza sativa
database: miRNEST
The numbers on the right side of the alignments show a score calculated for them.
When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5.

Predicted miRNA targets
gi|33803323|gb|CF327535.1|CF327535 NACL--02-B01.g1 Rice callus plasmid cDNA library (NACL) Oryza sativa Japonica Group cDNA clon

GCCTGGCTCCCTGTATGCCA
||||||||||||||||||||
CGGACCGAGGGACATACGGT

EST sequence (targeted fragment marked with yellow):
TTTTTTTTTTTTTTTTGATCCATGTTTATCAGGTTTAATTAAGCGTGTAATCTTAAGTGAGCACACACAATGAGTCAATGAGAGAGAGATAGAGACAGAGAGAGACGGTCATGCTTGGCTCCTCGCACGCCATCCGCAGTAGAGCCAAACGTACGAACACAATGCCTGAATCTCGCCGGGAGAAGGCAGTTGTTTCAACTGAGTTTGGCAGCTACGCGAGTGGCATACAGGGAGCCAGGCATATCCCCTTTTTTTCACCTCTCTTTTGCTTTTCAGCTTCCAAACCTTCTGCATCCTTGCCAATATGCCATGTATTCCCTTCTTTCAACACTGCAGTGCTCATCTCACACACACACCCCAATGCTAGACTCAAAGCCCAGAACACTTGGAGAAGAGAAGAGAAGACAACAACAACTCCTATATATGTACATCAACACAACTACTACTACTCCACCAAAGCCAAGAGCTCAGCTGGCATGACATTGTGATGGAGATGGCAGCTGGAGAAACAAGAAGAAGAAGAAGAAGAAGAAGAG



gi|117224673|gb|CT860482.1|CT860482 CT860482 Oryza sativa (indica cultivar-group) cv. Guang Lu Ai 4 Oryza sativa Indica Group cD

GCCTGGCTCCCTGTATGCCA
|||.|||||||||| | |||
CGGGCCGAGGGACAGA-GGT

EST sequence (targeted fragment marked with yellow):
GTCTCCAGCGCTCTCACGCACGACCACCTCGCCTCCTCCTCTCCTCTCCCCTCCCCTCCCCCACCTCGCCTCGCCTCCACGCGCGTGACGCGGCCGGCGACGGCGAGCCGCACGGCGCGTGGGCGTGCCTCGGGGGGGGGGGGGGCTAGCCCTCTCCTCTCGCGGGGGCGGCGGCGGCGGCGGTTGCTGGGCTCATTCCATTCGCCATCCCTCGGGCAGGTCTCGAGGTCGTCTGCGGTAGTCAAGCTGCTGTACGCAGGATAGGGGTTGCGAAGAGGGGAGGTATTCATGGGCGGAGGAAGTTGCAGGGACGATGCAAGGAATTTTTTTTGTCGCGAGAAAGACGGGAAGCGGCAGGAGAGGGAGAGGAGACCCCGGGGGGGGGGGGGGGGGGGGGGGAGAAAAAAAACCCCCACACAATACCTTCATAAACCTCATTTTACAATACCAACAATCCTTAAACAAATAGACCCCTCTCCCTTTAACTAACAATTTTATCATCATAACATGACAACTAATTAAATCATAAGTGATGGGAGAGAGGTGAGTGTGGGGAGGAACGAAGGAGGTGGCTGGGTATATTAAAGTTACAATAGTAGGTGTGAGGAAGCTAGACAGGGGTGGGGCGGGGAGATGAGAAGAGAGAGTAGTAACAACTAAGAGGGTGGGGAGGCGGACCGGGAGTGACTTGACTACCCAAAGAGCTGTGTCTTGGATGTCGCGTGTTAATGGTATTGTAGTGTCTGCGTAGCACACAAGGCACACGGGCAGAAGGATAAGGCGAAAGCGGGAGTGTGAAGGAATTCACCGCTTATACACTAGGTGCGACCCTCGGCGACGCGAGAGGAGGCGAAGCAAACAATGAAGAGAGAATGGTGGAGACAGGGAGCCGGGCAGCGCGGGTGCTCGTTGATGTCGTCTTCCCCTGTATGGGCGAGAGGGGGGGTGCAGGTGAGGGGAGTTGATGCGTCGGGGCATGTATGGGATGATTCAGGACGGAGGTAATACAAAACACTGAAGGAAAAAAGCACGATAAGAAGAGGGCGGAACATAGCGAGGGTAAACATCGGTTGTTTTGCATCCTAATGTGAATGGGACGGATGGAGCAACAAGAAGAAGAATGGAGGGGCAGTGACAAGAAATGGGCCTGAGGGGGAGGTGCGGGGAACGGAGGACATTGGCGGTGAATGGCGTAAGGTCGATATATACTCGTGTGCAGCTGGAGAGTGAATAGCGATACGAGCATAGGGGAGAGCATGAGGCGTGAAGACTCAACCGAACGCTGAGTATGTGACTGGCAGAGAGGATGGAATTGGTTCATTGAAGGATGGTATCGTTTATGTGTGGGCATGTCGATAGTTGCGGATGGATACGTCTAACCTGATGATAATGAGTGTCGATTTTGACATCATGACTCACTGTGCATCACGAATTCGCAGGTACGCGTGGTGTTGGTATGCGGGC



gi|58667037|gb|CK055723.1|CK055723 61088rsicek_4369.y1 Oryza sativa cv. PA64s panicle ferile cDNA library Oryza sativa Indica Gr

GCCTGGCTCCCTGTATGCCA
|||||||||||||||||||
CGGACCGAGGGACATACGGA

EST sequence (targeted fragment marked with yellow):
GCACGAGGGGAGGACTCATCAAGGATCAGCTGGTTCATGGGCACTGTATCGGCCGTGCAGGTTGCTGACCCCATTAGATGGCCTAATTCACCATGGAGGCTTCTTCAGGTTTCATGGGATGAACCGGACTTGTTACAGAATGTGAAGAGGGTGAGCCCATGGTTGGTTGAGCTTGTGTCAAACATGCCGGCCATCCACCTTGCTCCATTCTCGCCTCCACGGAAGAAGCTTTGCGTGCCGTTGTACCCCGAGCTTCCCATCGACGGCCAATTTCCGACACCGATGTTCCATGGAAACCCGCTCGCCCGTGGGGTTGGTCCTATGTGCTATTTCCCGGATGGCACTCCTGCAGGCATACAGGGAGCCAGGCATGCTCAATTTGGTATATCTTTATCAGATCT



gi|218502476|gb|FG960215.1|FG960215 MA_PA64s_08026 Mature embryo cDNA Library of PA64s Oryza sativa Indica Group cDNA 5', mRNA s

GCCTGGCTCCCTGTATGCCA
|||||||||||| .||| |
CGGACCGAGGGAGGTACCGC

EST sequence (targeted fragment marked with yellow):
TAGGTTTCGATCTCGCCCCCGGACGGCTTCCCCATCCCTTCACTCCTCCTCCCTCCGCGCGAAGGCTCGCCATGGAGGGAGCCAGGCGCCAGCCCGCAAGAGATCCCGGCCGGACACGGCCAACGGAGGCGCCGCCGGAGGGAAGCGCTCGAGAGAAACGGAGTCATTTCAAACTGGTCTATCAAGCAAATTGAAGCCTTGCACCAAGTTTATCAGCACTATCGGATGCCCTTTTGGCGAGGGTTGTCATTTCTCGCACTTTGTCCCTGGTGGGTATCAAGCAGATAGCAAAAACACTCAATCTAGGCAACCCAGCTGTGCCTGCACCGGCAAGAGCTCCTATGGATCATGCTGCTGGTGGTAATTCTCATCCAGCTTCTTCTGGCAAGACACGCATGTGCACCAAGTATAACACTGCAGAAGGCTGCAAATTTGGTGACAAGTGCCATTTCGCCCATGGTGAGAGGGAACTTGGCAAGCCAGCTTACATGTCCCATGAGAGTGCCATGGCTCCTCCTATGGGTGGTCGATATGGAGGCCG



gi|44673103|gb|CR286537.1|CR286537 CR286537 Oryza sativa library (Han B) Oryza sativa cDNA clone y809d09p5, mRNA sequence

GCCTGGCTCCCTGTATGCCA
|||||||||||||||||||
CGGACCGAGGGACATACGGA

EST sequence (targeted fragment marked with yellow):
TTGGAGTGGCATGTCGGGGTGAACGCGCCGGGCTATGGCGGCGGGGTTCTCGGCGTTCTGAAGGAGGAGGAGAGTAAGCTGATGAAGGGCCATGGTGGTGGTGGGTACATGAAGGGCAAGGGGAAGGTGAGGATGGCCGATGTCGTGGAGGCCGCTAGCCTCGCGTCGAGCGGGCAGCCGTTCGAGGTGGCGTACTACCCGAGGGCTAGCACCCCGGAGTTTGTCGTGAAGGCCGCGTCGGTGCAGGGCGCAATGAGGATCCAGTGGTGCTCCGGGGATGAGGTTCAAGATGGGTTTCGAGACAGAGGATTCATCAAGGATTAGCTGGTTTATGGGGACAATATCTTCTGTTCAGGTTGCTGATCCCAACAGATGGCCGAATTCGCCGTGGAGACTTCTTCAGGTGACATGGGATGAACCGGACCTGTTGCAGAATGTGAAATGTGTCAGCCCATGGCTTGTGGAGCTTGTGTCAAGTATTCCACCAATCCATTTAGGACCATTTTCGTCACCTCGAAAGAAGTTGCGGGTTCCCCCACATCCTGACTTCCCATTTGAGGGTCATCTTCTGAACCCAATTTTCCATGGGAACCCACTTGGTCCTAGCAACAGCCCACTATGCTGTTACCCGGACAACGCTCCTGCAGGCATACAGGGAGCCAGGCATGCTCAATTTGGTTTACAATAACAGAACACAGCTTAACAGCTGCCCTTGGTCTGTACATAG



gi|44668474|gb|CR281908.1|CR281908 CR281908 Oryza sativa library (Han B) Oryza sativa cDNA clone p474d04p3, mRNA sequence

GCCTGGCTCCCTGTATGCCA
|||||||.|||||| |||
CGGACCGGGGGACAAACGAG

EST sequence (targeted fragment marked with yellow):
TCCGTCGATNGGGCGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTCAATAATTAGGCTAGTTTCCTTAATATAAGTTTAGAAAATCAACATGATGGGCTCATCATACAAAAAAAAGTTTGAAGCTTTCAAGCTCCAAGCATATAGCTTGCATGAAAAGAGAACTGTGCAGCTAACCATAGCATTTCTATCTCACCAAGAAACAGCACTGGGATATTTTCCAAAGAACCTAGCAAAGATCCATCATGTTGAACATTTCAGTCACTATTCAGCATAATTAGCCTCTTCGACCATATGCAAGTCTGCAAACAGGGCACGCATATTCATAAATATGAACACATCAAGGTCACTAGCTTCATTGCCCACACAATCATCATCACCCAGCAACTCAACCAGTCCATGGTCACTACCTTCAGGTATTTGAAATATCAGGGGGCTAGTGGTTCACTTAGGACAAATGCTTGAATAAGACTTCGGGCTGCATGCATCTGGTCTGGTGTGCCGGATATCAAAATAGCAGTGTCCCTTGCATTACCCATCGGATCTGCGCACTGTTCTCTTAGCCCCTCGAAAACTCACGAATTCTGTTTCAAACAGCTCCCACTTCCCCACATCCGCAGGGTACACTAACATCGGGCCCCGGAAACTGCGAGAATGGGGGAGCAAACAGGGGGCCAGGCCAGCAATCCACCATCCTCTAGCGCATACTGGGACTCAGGATGAATTGGTCCCAAACACGCGGCCTCAGGCCACGAACACCCCACACGGGGGCACAAACATCACCAGGACAGCACCCACCAACAAACACAACAACA



gi|88337010|gb|CI627090.1|CI627090 CI627090 Oryza sativa (japonica cultivar-group) seed Oryza sativa Japonica Group cDNA clone J

GCCTGGCTCCCTGTATGCCA
|||.|||.||||| ||. ||
CGGGCCGGGGGACTTATAGT

EST sequence (targeted fragment marked with yellow):
GAGGCGTGGCATCTAGCTAGCTTTCCTTCCCACGACCAGCTACAGACGCAGTAGATCGATCGATCAACCACTCTCCAACTCTCCATTCGTTCTGTTACATACTCATCCTACATCGACAACGTCTCCAGTGCCTGCGCGACATTGATATTCAGGGGGCCGGGCCCGAGCCTGTAAGAACTCGATCAATCGAATCATATCCTCACAGATAATCTGAAGGCATCAGAAAGCAAATCAAGGGATTATCAAGTAGGGCTCCAGAAGAAATTGAGTTTAATCCAGCATTAAAAAAGAGATGGGTTTCTTGGCATTGCTTCTGGTGGCTTCAATGCCAGTCGTCCAGGTGCTACTCATAGGTGTTGTTGGAGCTTTTCTCGCTTCTGGTTACAGCAACATTCTAACTTCAAGTGCTCTAAGCGATATGAACAAGGTTGT



gi|86521038|gb|CI161244.1|CI161244 CI161244 Oryza sativa (japonica cultivar-group) Panicles mixture of one, two, three weeks aft

GCCTGGCTCCCTGTATGCCA
|||||||||||| | ||| |
CGGACCGAGGGAGACACGCT

EST sequence (targeted fragment marked with yellow):
GCAAACTCTTACTTATGTAGCAGTATTTACTTATATGGAGATAGTCGCACAGAGGGAGCCAGGCGCACTTATTTCACTCGTTCCCGCCTAATTACAAAAGCTACAACACACGCGTCGAGGCCAAACTCCCGCATCTCGCTCGCCCGGCAACTTGGATGGCTCACCGCTCACGCACTCGCCACGCCGCTCGTCGCCGCGGAGCGCGTCACACCGCAGCGGCTGCCATCCTCAGGAGCGTCTCCACCGCCTCGTCGCCGCGCCCACGGTGGCTGCGGCGGCGGCGGCGGTCTTCGTCCTCCGATTCCTCGCCGCGGCGGCCGCTCTTCTCCGGGCCGGCGAGGAACGCGGACTCCTGCTGCGCGTTGAGCAGCTCGTCCACCTCCCTCGCGCTCGCCGCGAACGCCAGCTCCTTGGCCTGCGGGTCCAGCTTCTTCAGCACGCTGTTCATCCCGGCGAGGTACATCCTCTCGTTGTTGTTGGCGTGGACGTCGAAGCAGACGATCTGGAGGGTGCTGTCGCGGGACGACGTCACCACGATCGGGTGGCCGGAGGGGACGACGAACACCGTGCCGCGCGACAGCCGCGCACGGATCGTCTCGTACCCCTGGCCGACTTGTTCTTCCTCTTCCTCCTCCTGCCCCTTCTGCTGCTCCTCCTCCTCCTCTTCCTCCTCACGCCACTTGCCCTTGCCGCGCTCGCG



gi|66926772|gb|CX113620.1|CX113620 EI083A10 A normalized whole-life-cycle cDNA library of rice Oryza sativa Indica Group cDNA cl

GCCTGGCTCCCTGTATGCCA
|| ||||||||||. |||||
CGTACCGAGGGACGGACGGT

EST sequence (targeted fragment marked with yellow):
CACAGCTGCTCTGTGTGCCACTGATTGGCTGGCCAGCGTGGTGCTGGCCACTGATTGTGCTTGCCAGCAGCTTGTGCGTGCCAGCGGTTGGCTCTATCCATCCGTCGTCCGTCGCGCTCACTCACACGCGTCCATCATACTCAACACAGCAAGCCAGCAACTCAGCAGCACACACACACATCACGCACTGCATTCGTCTATCGTCCGACACCCAACTGCCCTGGTGTTCAATCCTGGCATGGTGCTCCAACCTGCATCTGGCACAGGTGTGCTGTGGTGCATCTGTGCTGTGTGATGTGCGTGCACGTGGCAGGCAGGGAGCCATGCGATCGCAATTGCCCGTCTGACCTCCCCACCGCCCTGCCCCCAATGTTATGGCTGCGCAGCTGTGATGCGTCAACTGGACTCGCCCCGAGAGATCGTCCTCGTGCTGAACAGACTCTGCCGGAAACATCCTGGGTATACCAGTACAAAGCAAGACCAGGGAGTGCCAGTGGATACATATGTTTGGCATGGGTACTCGTTCAAACCACAAATACAACCATGATCAACAAAAGCAGAACACCATGGGTGGACGAGGTTAAGTACGGTATTAAATGCTATCGACGGAACAGTACAACACAGGCTATCACAGATAAACAAATCATTAGAAGACATGATGAGACAGTATGTGAAACTTATACAGATCAGAGCGCAAGCTGCGCAAGGTCAGGAGACAGCCACAGAAGGCAGAGGGAAGCAGAAATGGTGATGTGTGCTATGCAAGGGAATGGAATTAGTAATAGAGTAAGAATAACTGTACGGTTATG



gi|58591130|gb|CF989438.1|CF989438 16248rsicee_12296.y1 Oryza sativa cv. LYP9 tillering whole plant cDNA library Oryza sativa In

GCCTGGCTCCCTGTATGCCA
|||||||| ||||. ||||
CGGACCGAAGGACGGACGGA

EST sequence (targeted fragment marked with yellow):
GCACGAGGAAGAGAAGCTGCAAACCCGGCACTCCTCCTCTCCTCTCCTCCCCCATCGCCTTCCCCAATCCGTCGGGGAGGCCAAGGCAGGCAGGAAGCCAGGCGACAACAGCGCCGCCGCGGCGGCCGTGGCCGCGCCGCGTGGCAGGTTCGGCAGGATCTGCGTCTTCTGCGGCAGCAACGCCGGCAACCGCGCGGTGTTCGGCGACGCGGCGCTCCAGCTCGGGCAGGAGCTGGTGTCGAGAGGGATCGAGTTGGTCTACGGTGGCGGCAGCGTCGGGTTGATGGGCTTGATCGCGCAGACGGTTCTTGATGGCGGCTGCGGTGTTCTCGGGGTGATTCCAAAAGCACTCATGCCCACCGAGATATCAGGTGCAAGTGTTGGAGAAGTGAAAATTGTGTCTGACATGCATGAGAGGAAAGCTGAGATGGCACGCCAATCCGATGCCTTCATCGCTCTTCCTGGAGGGTATGGAACAATGGAGGAGTTGTTAGAGATGATAA



gi|88541178|gb|CI468431.1|CI468431 CI468431 Oryza sativa (japonica cultivar-group) 2nd week immature panicle Oryza sativa Japoni

GCCTGGCTCCCTGTATGCCA
|||||.|.|||||||. ||
CGGACTGGGGGACATGATGT

EST sequence (targeted fragment marked with yellow):
GGTAGGCACGCGCCAAAAATTATTGTAACTTAGAAGCATTTCAAGACAAAACAAGATGAAACGCATGTGACATGGAGTCCGGGCCTCCTCGGCCAAGCTTGTTACTTAGCAACCTAGCCGATGTAGTACAGGGGGTCAGGCAACTTGAAGGTGCGGGCGCCCTCCGGCGCACCGAGGATGTCGCTCCACTGGTCACCGATGTTACCGACAATGGTGAAACCGGCATCCTCCAGCTTCTGCCGCTCGCCGGACTTGAATGCAACGACAGACCCCAGGAGTTCGCCGGCGGTGTGCACTGCTGGCTTGAGCAACAGCTTCATCCACCCGGAGTATCCCTGCCGGCGAAGGTTTGTGACGGTGATGTTCCTTTCGTCCTCGGTGCGGCTTGTCAAGAACACCGGCTT



gi|58659214|gb|CK047894.1|CK047894 49608rsiceh_20361.y1 Oryza sativa cv. PA64s panicle ferile cDNA library Oryza sativa Indica G

GCCTGGCTCCCTGTATGCCA
|||||||||||||||||||
CGGACCGAGGGACATACGGA

EST sequence (targeted fragment marked with yellow):
CGGCACGAGGGCGGAGGACGTCGTCGAGGCGGCGAGGCTGGCGAGCGGCGGGCAGCCGTTCGAGGTCGTGTACTACCCGCGCGCCAGCACGCCGGAGTTCTGCGTGCGCGCGGCGGCGGTCCGCGCGGCGATGCGGGTGCAGTGGTGCCCCGGGATGCGGTTCAAGATGGCGTTCGAGACCGAGGACTCCTCCCGGATCAGCTGGTTCATGGGCACCGTCGCCAGCGTCCAGGTCGCCGACCCCATCCGTTGGCCGCAGTCGCCGTGGCGGCTTCTCCAGGTGACCTGGGACGAACCGGACCTCCTCCAGAACGTGAAGCGGGTGAGCCCATGGCTGGTCGAGCTGGTGTCGAGCATGCCGGCCATCCACCTCTCGTCCTTCTCGCCGCCGCGCAAGAAGCCCCGGATTCCGGCGTACCCGGAGTTCCCCTTCGAGGGGCAGCTCCTCAACCCGGCGTTCCCGCCAAACCCGCTGGCACACGGGCACCACCATTACCATCACAANCACCCGTCCTTCTTCCCGTTCCCCGACGTTAGTGCTCCTGCAGGCATACAGGGAGCCAGGCATGCGCAATTTGGTCCATCTTTATCAGATCTC



gi|40492433|gb|BX900269.1|BX900269 BX900269 Oryza sativa library (Han B) Oryza sativa cDNA clone y639d10p3, mRNA sequence

GCCTGGCTCCCTGTATGCCA
|||||||| |||| |. |||
CGGACCGACGGACCTGGGGT

EST sequence (targeted fragment marked with yellow):
TTCGGGCCGCTGCCTTCACTTAGTCGCAGTCTCAGCAGTCGCACTGGGCCGCTAGCGTGCGCCCATGTCTTTTTGTGTCTTCTTCTTTTTCTTTTTCAGCACACATCCAGCACACTGCACACATTCCAGTGCACTGCATGCATTCCCCACACAGGGTCCATCCACAAATCAGTGCATGCCCAGAACAGCCCAATGCACTTTCACCAGGCATTTATTTCTCCACGCCATCCACAACAACCAACGCAACGCATGCTGCATCGCACGCAAGCACACCATCCCACCCCACAACTGCATCCACTCACTTGGGGTCCAGGCAGCCAGGCATCTGACCTCCTGTGGCTGGATGCGTTGGCGCTGCAATGCCTGTCAGCACACTGGGTTGTGTTGGTCAGTTGGTTGCTGGGGTCCCTCCTGGGCGTACAGCCGTCTGTGGCCTCCCGCGCTCTGTGGACCATCTGCACCACCCACCCAGACCAGGGTTCTCCCTATGTTCTGCAAGATCTGTTCCCACAGCACAGGGCCTCTTCATCTCGTCTCCAACATTGTGCCATCTGGTAAACTGAGGCAAGTATGAGTCCCGTGAGCTGTACAACACATAGGATTGGGTCACAAATCTGAGCTGTACCAGCTGCTGGGCAAAGTGCGTTGACCAGCACAGGACTGATACCCCCCGAAAAGCCAATTGGTGCCGCACTTGCATTAATAAGGATTGCAAAGCGATGTGGCGGAAAATCCGCCTTTTAATCAATCGCGTGTCGGCGTACATCATTGTGCGGCAGGCAACGACGATCAACCGGGATCCAATTCCATTCCACAGGGAAAGAGAGGTGTCGCCGTGAGTTCCACGCGATGATCGTCAATGACAAGGACGACCTCCTGTAAATATGGTGTCACTTCACCCAGAGATAATAACACCGGCCACGTATGTAAGAAAGCGCTTCAGTTCTAGTCGCACCAACTTGATCTGGGCAACAAGAAGCAC



gi|41882789|gb|BX928093.1|BX928093 BX928093 Oryza sativa library (Han B) Oryza sativa cDNA clone y619f08p5, mRNA sequence

GCCTGGCTCCCTGTATGCCA
|||||||||||||||||||
CGGACCGAGGGACATACGGA

EST sequence (targeted fragment marked with yellow):
GGAATTCGGCCATTATGGCCGGGGGAGGGGCGGCGGCCAGGGGCAAGGTCAGAGCCCGTGTCCGGCCAGAGGAGGTCGTCGAGGCGGCAATCTCGCCGTGAGCGGGCAACCATTCGAGGTCGTCTACTACCCGAGGGCGAGCACGCCGGAGTTCTGCGTGAAGGCCGGGGCGGTCAGAGCGGCGATGCGGACGCAGTGGTTCGCCGGCATGAGGTTCAAGATGGCATTCGAGACGGAGGACTCATCAAGGATCAGCTGGTTCATGGGCACTGTATCGGCCGTGCAGGTTGCTGACCCCATTAGATGGCCTAATTCACCATGGAGGCTTCTTCAGGTTTCATGGGATGAACCGGACTTGTTACAGAATGTGAAGAGGGTGAGCCCATGGTTGGTTGAGCTTGTGTCAAACATGCCGGNCATCCACCTTGCTCCATTCTCGCCTCCACGGAAGAAGCTTTGCGTGCCGTTGTACCCCGAGCTTCCCATCGACGGCCAATTTCCGACACCGATGTTCCATGGAAACCCGCTCGCCCGTGGGGTTGGTCCTATGTGCTATTTCCCGGATGGCACTCCTGCAGGCATACAGGGAGCCAGGCATGCTCAATTTGGTATATCTTTATCAGAATCTCAACTTAAGAAACTGCAGGCGAGTCTATCGGCCCAGGGGGTTTACAGATTGATCAGGGATGGAGCGAAGATTGAGATGGGTAATACGGGAAACGGGGGCGGGGAGAATTAAGGAGAGAG



gi|88540377|gb|CI469267.1|CI469267 CI469267 Oryza sativa (japonica cultivar-group) 2nd week immature panicle Oryza sativa Japoni

GCCTGGCTCCCTGTATGCCA
|||||.|.|||||||. ||
CGGACTGGGGGACATGATGT

EST sequence (targeted fragment marked with yellow):
GGTAGGCACGCGCCAAAAATTATTGTAACTTAGAAGCATTTCAAGACAAAACAAGATGAAACGCATGTGACATGGAGTCCGGGCCTCCTCGGCCAAGCTTGTTACTTACCAACCTACCCGATGTAGTACAGGGGGTCAGGCAACTTGAAGGTGCGGGCGCCCTCCGGCGCACCGAGGATGTCGCTCCACTGGTCACCGATGTTACCGANAATGGTGAAACCGGCATCCTCCACCTTCTGCCGCTCGCCGGANTTGAATGCAACGACAGACCCCAGGAGTTCGCCGGCGGTGTGCACTGCTGGCTTGACCAAAAGCTTCATCCACC