| mature miRNA: GCTCACTCTCTATCTGTCAGC species: Oryza sativa database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|88377894|gb|CI638028.1|CI638028 CI638028 Oryza sativa (japonica cultivar-group) callus UVB iradiated callus, immid after trea GCTCACTCTCTATCTGTCAGC EST sequence (targeted fragment marked with yellow): ATGTGTTATACTGTTCTCTCATATCTATCTTCTTTGAGGTAGTAATATACTTGAGCAAATTAAGCTGCTTAATTATTTGTGTATGATGATCAGCTGCTGATCCGGCCTCATTTCTTGCATATATGACCACAACCACATACATGCTTGTTCATTTTTTTTCACAAAGAAAGAGAACAGTTTAATTTAATTTCTTGGGGTTTTTGGATCAGTTAATTTGTCTTGAGAGGGGAAGAGATCTCTATGGGTTTTGGAGGTCTGACAGAAGAGAGTGAGCACACACGGTGCTTTCTTAGCATGCAAGAGCCATGCTGGGAGCTGTGCGTGCTCACTCTCTATCTGTCAGCCGTTCACCATGCCCAATATGATTAATCTCCTTCTCTCAGTTGACAGTAATTT | |||||||||
gi|88575992|gb|CI670137.1|CI670137 CI670137 Oryza sativa (japonica cultivar-group) library (Kikuchi S) Oryza sativa Japonica Gro GCTCACTCTCTATCTGTCAGC EST sequence (targeted fragment marked with yellow): GGGTTGGTACGACCATCACCCGTCCCATCCATCTCCTCTGCTCCAAGAAGCAAACACCAAGAAACAAAGAGGGAGGGAGAGAGAGAGATAGAGGGAGAGAGTCCTTTTCTCTCACCAGCTCTCCTTTCAAGCTCAGTACGGTGGCCGCTCACCGGATCCAAGAAGAAAACCTCTCTTCCGTTTATGATTCTTTCTCTTGAGTTCTTGAGGTTTTATTTGGTTTTTCTTTGAGTTTTTACTCGTTTTTCTCGATTTCTCGATTTCGATGACTCGGAACTAAATAGGTTCTCTAATGACAAGTAAGAGCAAGAAATTTCTAGCACGGAGAAGCTCTCATGAGATTGACAGAAGAGAGTGAGCACACGGCGTGATGGCCGGCATAAAATCTATCCGGTCCTCGCCGGCTGCTCACTCCTCTTTCTGTAACCTTTTTCTCTCAGGTTT | |||||||||
gi|88351577|gb|CI628797.1|CI628797 CI628797 Oryza sativa (japonica cultivar-group) library (Kikuchi S) Oryza sativa Japonica Gro GCTCACTCTCTATCTGTCAGC EST sequence (targeted fragment marked with yellow): GGAGAGAGTCCTTTTCTCTCACCAGCTCTCCTTTCAAGCTCAGTACGGTGGCCGCTCACCGGATCCAAGAAGAAAACCTCTCTTCCGTTTATGATTCTTTCTCTTGAGTTCTTGAGGTTTTATTTGGTTTTTCTTTGAGTTTTTACTCGTTTTTCTCGATTTCTCGATTTCGATGACTCGGAACTAAATAGGTTCTCTAATGACAAGTAAGAGCAAGAAATTTCTAGCACGGAGAAGCTCTCATGAGATTGACAGAAGAGAGTGAGCCCCCGGCGTGNCGGCCGGCCTCNCNTCTATCCCGCTCCCCGCCGCGCTNCTCACTCCCTCTTTCTGGTTATCTATTTTTTTNAGGGTT | |||||||||
gi|88357963|gb|CI650699.1|CI650699 CI650699 Oryza sativa (japonica cultivar-group) 4 days after transferring callus Oryza sativa GCTCACTCTCTATCTGTCAGC EST sequence (targeted fragment marked with yellow): ATCCATCTCCTCTGCTCCAAGAAGCAAACACCAAGAAACAAAGAGGGAGGGAGAGAGAGAGATAGAGGGAGAGAGTCCTTTTCTCTCACCAGCTCTCCTTTCAAGCTCAGTACGGTGGCCGCTCACCGGATCCAAGAAGAAAACCTCTCTTCCGTTTATGATTCTTTCTCTTGAGTTCTTGAGGTTTTATTTGGTTTTTCTTTGAGTTTTTACTCGTTTTTCTCGATTTCTCGATTTCGATGACTCGGAACTAAATAGGTTCTCTAATGACAAGTAAGAGCAAGAAATTTCTAGCACGGAGAAGCTCTCATGAGATTGACAGAAGAGAGTGAGCANCNGGGGTGCTGGNCGGCCT | |||||||||
gi|88309528|gb|CI655896.1|CI655896 CI655896 Oryza sativa (japonica cultivar-group) leaf of seedling gamma-irradiated(45Gy), immi GCTCACTCTCTATCTGTCAGC EST sequence (targeted fragment marked with yellow): TCCTCATTCATTTTCCTCTTCTTCTTCTTCCCACCTCCCCTCCTCAACTCTCCCCCTTCTCCTGCACCTCTGATCGTGANGAGCCATTACTACTACTAGCTCGATTGCTCGAANTCCTNCTCCCCCACTCCTCCGNCATTCANCCGCCTACCCTCGCGCGCACTCGCGGTGTATATATCTATCCGGCAGCTCGATTTGTGGCCTTGCCGGTGAGGTTTGTGAGCTGTGGGCGGCGTACCATGCGGCGGTGACAGATAGAGAGCGAGAGACACAGGATGCCGCACGCCTCCCCCCCTCCGCAT | |||||||||
gi|66912943|gb|CX099791.1|CX099791 RECm0527 A normalized whole-life-cycle cDNA library of rice Oryza sativa Indica Group cDNA cl GCTCACTCTCTATCTGTCAGC EST sequence (targeted fragment marked with yellow): GCAGGTCGGTCCGAATCCGGGTCGACCACGCGTACGCCACGCGTCCGCCACGCGNTCGGTAATGTTCTACACGTTAGTGAGATGTAGAGAGAGATATGGCTAGCTAATCCATGAGAGAGGTCTAGATAGAGAGAGGGAGAGATGATCAGTTCTTCAGAAGAGGCTACTACTAGCTATCTAGCTTCATGTTTAACTCTTCTTGGTTTGTGTTTTTGTGTGCTTGTTGGAGTTGTTAGGAGGAAGAGAGGGGTGAGAGGTGAGGCTGACAGAAGAGAGTGAGCACACATGGTGACTTTCTTGCATGCTGAATGGACTCATGCTGTGAACCTATGTGTGCTCACTTCTCTCTCTGTCAGCCATTTGCTCTCTCTTTCTCTCTTTCTCCCTCATGTGTTATACTGTACTCTCATATCTATCTTCTTTGAGGTAGTAATATACTTGAGCAAATTCAGCTGCTAAAAAATAAGTGTATGATGATCAGCTGAAGATCCGGACTAATAAATTGCATCTCTGAGCAGAACAACAATCATGCCTGATCCACTATAAATAACACGACAGAAAAACGATTAACATTAATGTACTTGAAGATCAAAGGAATAAATAACTAGTCTTGAAATGGGCAGAGATCAAACAGGTACAGAACGGACTGAAAAAAAAAGGCAAAAACACCATACAACGACCATGGCCTAACCTCCTGGACACAGAGAGTGCCAATCACAATGGACAGCCATGCCATCCAAACCAATCACCGAACACAACCGCAAGAGAAAAAGGAAAAATCCATAACAGAGCGCAAAAAAA | |||||||||
gi|87027126|gb|CI278158.1|CI278158 CI278158 Oryza sativa (japonica cultivar-group) mixed shoot (Normalized Library) Oryza sativa GCTCACTCTCTATCTGTCAGC EST sequence (targeted fragment marked with yellow): CATGATGAACAACATAAGAGAAATAACATATCGAGCAGAAGTCCTCGACAATACAGCATTAACGCTGATACTTAAAAATTCATGGAGAGTTACATAGATGGATGCGGCACAGCAATTAATTGAGTTCAAGGGCGCGCATTATTATTCATCACAGGGAGATTAATCGCCAGTCACCTTAGAATTTCCTTTCCATACTGGAAAGGAAAATTTGAACACAAAATAAGGGCAGGCAGCATGAGGTTCTTCAGTTCCATGACTCGCCTTGCGGGACGACAGATCGATGGCAGCTGGAACAGCCTCTACAGAGACCAATCCATCGTGTTGCTGGTTTGGTCGAAGGTGCTGCCGGACCCAGGATCGATGCGTGGTGCTGGGGCTGGACCGTTCCCCTGCAGAGCAAGCTCAAGCTCACCGGAGAAGTGGGCATGATGGCTAGGACCAGTGTGCACCTCATCAAGTGAGACTTCATGTGGTAGCTGGTGCGCCACGCTCCGACCACCACCCTCATGGCCCCGAGAACCTGTCCAGNGGCTTGGTGCCATGTAGCTACCCGCCATGGCGGAGGGTGCCACAGGATTGCCATCAAAGCTGGTGGTAGTGGACATTGCTGCAGCCTGGTTGTGGCTGGCAGCGGCACTGTGGGTAGTAGTATCCCATGGCTGGGTTGACAGAAGAGAGAGAGCACAGCTCGAGTCGGTGG | |||||||||
gi|88337623|gb|CI630920.1|CI630920 CI630920 Oryza sativa (japonica cultivar-group) leaf of seedling irradiated with UVC [0.7 min GCTCACTCTCTATCTGTCAGC EST sequence (targeted fragment marked with yellow): GGAGAGAGTCCTTTTCTCTCACCAGCTCTCCTTTCAAGCTCAGTACGGTGGCCGCTCACCGGATCCAAGAAGAAAACCTCTCTTCCGTTTATGATTCTTTCTCTTGAGTTCTTGAGGTTTTATTTGGTTTTTCTTTGAGTTTTTACTCGTTTTTCTCGATTTCTCGATTTCGATGACTCGGAACTAAATAGGTTCTCTAATGACAAGTAAGAGCAAGAAATTTCTAGCACGGAGAAGCTCTCATGAGATTGACAGAAGAGAGTGAGCACACGGCGTGATGGCCGGCATACACTCTATCCCGCTCTCGCCGCGTGCTCACTCCTCTTTCTGTCACCCTCTTTCTATCAGGGCTCAAATC | |||||||||
gi|29677808|gb|CB674083.1|CB674083 OSJNEe08P13.f OSJNEe Oryza sativa Japonica Group cDNA clone OSJNEe08P13 5', mRNA sequence GCTCACTCTCTATCTGTCAGC EST sequence (targeted fragment marked with yellow): GTCCCATCCATCTCCTCTGCTCCAAGAAGCAAACACCAAGAAACAAAGAGGGAGGGAGAGAGAGAGATAGAGGGAGAGAGTCCTTTTCTCTCACCAGCTCTCCTTTCAAGCTCAGTACGGTGGCCGCTCACCGGATCCAAGAAGAAAACCTCTCTTCCGTTTATGATTCTTTCTCTTGAGTTCTTGAGGTTTTATTTGGTTTTTCTTTGAGTTTTTACTCGTTTTTCTCGATTTCTCGATTTCGATGACTCGGAACTAAATAGGTTCTCTAATGACAAGTAAGAGCAAGAAATTTCTAGCACGGAGAAGCTCTCATGAGATTGACAGAAGAGAGTGAGCACCCTGCGTCGATGTTGCGATCATATCTCCTCTCCCGCCCTCGCGGAAAGTAATGGCGTATTTGCGGCCTTGCCGGTCATTAAAGGTGAATGATGACCTTTATCTAAGATGC | |||||||||
gi|117252180|gb|CT844340.1|CT844340 CT844340 Oryza sativa (indica cultivar-group) cv. Guang Lu Ai 4 Oryza sativa Indica Group cD GCTCACTCTCTATCTGTCAGC EST sequence (targeted fragment marked with yellow): GCCATCTGGCTCACCAAGAGCTTCAAGGAGACAGGGCTGTAAGCATATGCGATCACTCTCACCTTGCTCTAGAAAACAAATGAGCAGAAGCAAATTAAATTGTAGCTCAGGAAAGATTAGTTGCTGACAGTGTGACACCATCTCAGTGTTGCCTCCCCCAACTAGCTTATGAAAGATTATTCAGTGATCATCTATGGATTAACAAGGAAGTAGCGGTAGTTCTATACTTCTATGTGGTGTTGGTCTGAAGCAGGAAGTAGTAGTAGTTCATGTTTCTAACCATGTAGGAGTACTTGACAGGTAAACTGGGCATTCCAGCCCGGCTGAAGAATCATCCAGTTGATTGATTTTGTTTCTGTTTGAATAGCATTTCTCTTGTTCATGTAATCTTGAGTTATTGAAGGTTTACAGAGAGAGAGAGAGCTGCTTGCGTTGTATTATCCAAAGTAGGAATTCAGACAATGGCCATATCTGATGGAGGACAACAAGAACAATTTGAGGAGCTTGTACTGGAACTATGCACAAAGATAACGTTCTTGTCATATTGTTCCTCTGTTTTCAAAAAAAAGTCCCTCATAA | |||||||||
gi|88692261|gb|CI735836.1|CI735836 CI735836 Oryza sativa (japonica cultivar-group) after pollination embryo Oryza sativa Japonic GCTCACTCTCTATCTGTCAGC EST sequence (targeted fragment marked with yellow): GATGCATAAACCTTCAGCCCTGGGAGGTACGACCATCACCCGTCCCATCCATCTCCTCTGCTCCAAGAAGCAAACACCAAGAAACAAAGAGGGAGGGAGAGAGAGAGATAGAGGGAGAGAGTCCTTTTCTCTCACCAGCTCTCCTTTCAAGCTCAGTACGGTGGCCGCTCACCGGATCCAAGAAGAAAACCTCTCTTCCGTTTATGATTCTTTCTCTTGAGTTCTTGAGGTTTTATTTGGTTTTTCTTTGAGTTTTTACTCGTTTTTCTCGATTTCTCGATTTCGATGACTCGGAACTAAATAGGTTCTCTAATGACAAGTAAGAGCAAGAAATTTCTAGCACGGAGAAGCTCTCATGAGATTGACAGAAGAGAGTGAGCACNCGGCGTGATGGCCGGCCTTC | |||||||||
gi|87021626|gb|CI276025.1|CI276025 CI276025 Oryza sativa (japonica cultivar-group) mixed callus (Normalized Library) Oryza sativ GCTCACTCTCTATCTGTCAGC EST sequence (targeted fragment marked with yellow): AAAGAAACTGAAAGCCTAAATTGATTTATCAATTATATGTAGTACATGAAATAACAGTAAGCACCAGCACATACATAGTAGATTCAATTCATGGACAGATTCAGAGAAGGAGCTAGCTAGAGACCCCAATTAATTAGACACCCTTCAAGAGTATATATACTAGCTACACTCATATTATTTCTCAGAAATACTTCACAGAGAGAGTACGCATGATCGATTTCGGTGCTCACAATAATTATTTGATCCGGCTCTTGATCATTCAGAGATGATCTAGTCTGACAGCCAAGAACAAAAATTAAACCAATGCACACCTTCTTCTGACGACTATGAAAATCGTCAGAACGACCTCGTCTCGTCTTTGTACTAGCTGGAAACTAGCTAGTGTATGCCTGCATATAATTAATTAAACAGCGAAAAGAAATATAATGAATCAAATCATAGCTAGTTTGTGTTTTGCCGTGGAGATGATATTGGCAGGCTCATCATAATAAGCATGTGCATAATAGCTAGCTAGGCAGAAAATTTAACAGGAGATCTGGCAAAGAAATTACTGTCAACTGAGAGAAGGAGATTAATCATATTGGGCATGGTGAACGGCTGACAGATAGAGAGTGAGCACGCACAGCTCCCAGCATGGCTCTTGCATGCTA | |||||||||
gi|88572231|gb|CI663802.1|CI663802 CI663802 Oryza sativa (japonica cultivar-group) callus suspension-cultured cells treated with GCTCACTCTCTATCTGTCAGC EST sequence (targeted fragment marked with yellow): GGGGAGGTACGACCATCACCCGTCCCATCCATCTCCTCTGCTCCAAGAAGCAAACACCAAGAAACAAAGAGGGAGGGAGAGAGAGAGATAGAGGGAGAGAGTCCTTTTCTCTCACCAGCTCTCCTTTCAAGCTCAGTACGGTGGCCGCTCACCGGATCCAAGAAGAAAACCTCTCTTCCGTTTATGATTCTTTCTCTTGAGTTCTTGAGGTTTTATTTGGTTTTTCTTTGAGTTTTTACTCGTTTTTCTCGATTTCTCGATTTCGATGACTCGGAACTAAATAGGTTCTCTAATGACAAGTAAGAGCAAGAAATTTCTAGCACGGAGAAGCTCTCATGAGATTGACAGAAGAGAGTGAGCACNCGGCGTGATGGCCGGCCTNNNATCTATC | |||||||||
gi|88298827|gb|CI566024.1|CI566024 CI566024 Oryza sativa (japonica cultivar-group) shoot Oryza sativa Japonica Group cDNA clone GCTCACTCTCTATCTGTCAGC EST sequence (targeted fragment marked with yellow): GACCCGTCCCATCCATCTCCTCTGCTCCAAGAAGCAAACACCAAGAAACAAAGAGGGAGGGAGAGAGAGAGATAGAGGGAGAGAGTCCTTTTCTCTCACCAGCTCTCCTTTCAAGCTCAGTACGGTGGCCGCTCACCGGATCCAAGAAGAAAACCTCTCTTCCGTTTATGATTCTTTCTCTTGAGTTCTTGAGGTTTTATTTGGTTTTTCTTTGAGTTTTTACTCGTTTTTCTCGATTTCTCGATTTCGATGACTCGGAACTAAATAGGTTCTCTAATGACAAGTAAGAGCAAGAAATTTCTAGCACGGAGAAGCTCTCATGAGATTGACAGAAGAGAGTGAGCACCCGGCGTGATGGGCGGCCTAAAA | |||||||||
gi|117243289|gb|CT856552.1|CT856552 CT856552 Oryza sativa (indica cultivar-group) cv. Guang Lu Ai 4 Oryza sativa Indica Group cD GCTCACTCTCTATCTG-TCAGC EST sequence (targeted fragment marked with yellow): TCGGTTCGTCCTCGTGTGGCAGACAGCAGCAGCATGAGCTCCCTAGTGCGAGTCCTCGCCGTCTCCCATGTCCTCCCCGACGAGGTGGCCGCCGGAGGCGCATGGCCGCCGCCGCCGCCGCACGTCGTTGAGCTCTCCTTCTTGGACAACCTCCAGGTCTCCAAGGCAGCGATCCAGCGGCTCTTCTTCTACGACGGCGGCAGCCTCCCGCCTTTCGAATCCGTTGTCCGCTCTCTGCAGTCCTCCCTCGCCGCCGTGCTCGCCGTCTTCCTGCCCCTCGCCGGGGAGCTGGCCTACCTTCCCCGAGCCCGGCGACCGCCGTCATCTACTATTCTTCCGGAAGCCGTCTCCCCCGGCGTCGAGGTTTGTCGAGGGGGGGGGGGGGGGGGGGAGAACCCCCCCCTTGCAGAGACACCTCTGCAACTGGCGAATAAGTTACCCGAGGGGTGGGGTGAGATGTCTAGCCTAAGCAGTAGTAGAGACTGGATCCGATATCCCCGCCTTCCAGAGAGTGTATGGCTCTCTTCTCTCAAGTCTAACTACAATCAAAAGATAATATAACGGACTGTGTTTCGTTACTTCCATACCGGGGTTTGTGCGGCCGTTAGGTGCTAGTACAACTGTTTCAGATTGTTGAGGGATAATCATAACGTTGGGGTGGTTTATCGATGGGGGGAAGGTTGGTCTGCAGTGGGGGGACAGCTCAATTTCAATGATAGGGATTCCCGTTGAACAACCCGTTAACGACTGTTCTCCCTGTGGATGTAGAAGACGGTGTGGTATCGCGAGGGGAGGGTAGGAGTATAATTGAGTTAAGTTGATAGAAAAAGCTAGGGTACCGTTGTTTCGCAGTGGTCTAGCTTCTGGAAGGGCCGTACGGATCCGGGAGTAGACGCGATCACAGAGAGCTGAGCAGAGAGAGGGTGAGCACAGCCTCAACTACGGTGGCAATTAGTAGCAGAAGATACTCTGGTGCTTCTGATGCTAAATATGAGAGCTTGTCTGAGGAAGAGGAATACGCACGAATGTGGTGAAATCCAGTGAGGGTTGGGGTAGGTACGATCACTTCATATGTGTGGTTGTTCCTACGCAAAGCACTGTTACCCACGGCAGAGTCAACGGAACGTGATTTGTGATGCGTGGGGCTGGTACCAGTGTCTATTAGTGTTTCACCACCACGCTCGCCCTCCACTCTTGGAGGTGTGTATCGTCGCTGACTTGATTTTGCGTGTTACTA | |||||||||
gi|117226244|gb|CT846177.1|CT846177 CT846177 Oryza sativa (indica cultivar-group) cv. Guang Lu Ai 4 Oryza sativa Indica Group cD GCTCACTCTCTATCTGTCAGC EST sequence (targeted fragment marked with yellow): AGCCCTGGGAGGTACGACCATCACCCGTCCCATCCATCTCCTCTGCTCCAAGAAGCAAACACCAAGAAACAAAGAGGGAGGGAGAGAGAGAGATAGAGGGAGAGAGTCCTTTTCTCTCACCACCTCTCCTTTCAAGCTCAGTACGGTGGCCGCTCACCGGATCCAAGAAGAAAACCTCTCTTCCGTTTATGATTCTTTCTCTTGAGTTCTTGAGGTTTTATTTGGTTTTTCTTTGAGATTTTACTCGTTTTTCTCGAATTCTCGATTTCGATGATTCGGAACTAAATAGGTTCTCTAATGACAAGTAAGAGCAAGAAATTTCTAGCACGGAGAAGCTCTCATGAGATTGACAGAAGAGAGTGAGCACACAGCGTGATGGCCGGCATAAAATCTATCCCGTCCTCGCCGCGTGCTCACTCCTCTTTCTGTCACCCTCTTTCTCTCAGGGCTCAACTCCTATCCAGATCTATTAGCAGGCTTACAAAATCACTAAATTACTTTGATTTGGTGTTACTCAATTTGATTGTTGTGATCTAGCCTTTTCCTCCAAAGAAGCACTAGAAACCACCCCTTATGCTTGGTAGAGAGAAACCTCATGCTTGGTACAGAGAAATTCAGCCACAAGAAGACAGAGAACGCATGCTTGAACCATGCTGTCGCCGGAACTACTACCGAGGAGAGTGATACGGATGCTGGTGATAATGTGGTAGTACTACTCCTTGCGTTGGGAGCTGAAGCATGGAGATGCTGCCAGTACACTGGAGCACTGTGGTGATTCATCAACAGGATTAACCGGATCTTCTCTCTCTTTCTTCTTCTACCCCATCTCTTCTCTTCACTTCTCTCTTTGCTCTCTTGTTTTTCAGCTAAAGCTCCTTGTGCAGGTTGTTGGCCATGGTGGTGGGGTTCATCAAGTTATTGCTTGGTCAAAAATGGAGCATGGAAGAGGCTAACAGATGACCCATATTTGGCATGCAAGGTTGTTTCGCTATGCGTTTGCCAGATCTGGCTCGCATCTTAGATAAAGGTCATCATTCATGTTTAATGGCCAGCAAGGCAGCAACTACACCATTAATTTCCACAAGGGATTGGGATGAGATATGATTCAAGCTGATGGATGCTTTACAAAAGTCACTTCATGTGCTTGACATGCATGCGCGTGCAGTCCCATTCTGAGAGTAAACTCTTGCAACAGCGCGCAGCGGAGAGGGGGTAACCTAATTTTTAAGATTCAAATGACCTTTTTTTTAAGGGCCTCAATCTTGGCGCGGCTGGAGACGGACACTGTTGAAATAAATTGGAACTGAT | |||||||||
gi|218499372|gb|FG951059.1|FG951059 MA_93-11_07954 Mature embryo cDNA Library of 93-11 Oryza sativa Indica Group cDNA 5', mRNA s GCTCACTCTCTATCTGTCAGC EST sequence (targeted fragment marked with yellow): ANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATTCCGTCGTCGATCGGTCTCTCTCTCTCACCGGATCCGAGAAGCAAAGAACCGATCTTTTTTCTTCTTTTTTCCCCTGCGTGATGCTTCTTGTTTACTACTACGTGGGTGCAGTGCAGGTTTGTTGATCGATCTTGGGGCGGGGCGGGATCGAGCATATGAAAGGCGAGATTGTTGACAGAAGAGAGTGAGCACACGGCGCGGCGGCTAGCCATCGGCGGGATGCCTGCCCCCGCCGCGTGCTCGCTCCTCTTTCTGTCAGCATCTCTCATCACTCCCTCCCGCATCCCCCGCCCCGATCTCGCGTCGATCTCTCATCTCCGGAGAGGAGCCATCTTTTAGTTTGTTTGATTTGATTTGATCTCGTTTCCCTGAATTTCTTGGTGGAAACCCGCGCCGAAACGCGTGGCTTTTCTTTCTTTCTTTCTTTTAAATGTGCAGAGACAGAGAGATCGAGATAGCAAGGACATGTCACTTCCTTATCTTCT | |||||||||
gi|88423867|gb|CI609898.1|CI609898 CI609898 Oryza sativa (japonica cultivar-group) callus Oryza sativa Japonica Group cDNA clone GCTCACTCTCTATCTGTCAGC EST sequence (targeted fragment marked with yellow): GTGGAGGTACGACCATCACCCGTCCCATCCATCTCCTCTGCTCCAAGAAGCAAACACCAAGAAACAAAGAGGGAGGGAGAGAGAGAGATAGAGGGAGAGAGTCCTTTTCTCTCACCAGCTCTCCTTTCAAGCTCAGTACGGTGGCCGCTCACCGGATCCAAGAAGAAAACCTCTCTTCCGTTTATGATTCTTTCTCTTGAGTTCTTGAGGTTTTATTTGGTTTTTCTTTGAGTTTTTACTCGTTTTTCTCGATTTCTCGATTTCGATGACTCGGAACTATATAGGTTCTCTAATGACAAGTAAGAGCAAGAAATTTCTAGCACGGAGAAGCTCTCATGAGATTGACAGAAAGAGAGTGAGCCCAGGGGGTGCCGCCCC | |||||||||
gi|58682122|gb|CK070809.1|CK070809 72005rsicem_2769.y1 Oryza sativa cv. PA64s panicle ferile cDNA library Oryza sativa Indica Gr GCTCACTCTCTATCTGTCAGC EST sequence (targeted fragment marked with yellow): GCACGAGGAAGAAGATCATGGTGAACTTTCTTCCATAGCAAGGCAAGGGTCTGGAAGTGCATGCCGCAGTATATATGGGGGATTCGTGAAATGGTGTATGGGAAAAAATAATGATGGAAGCGACAGCATAGCTGTACAACTTGCTGATGAGGCACACTGGAATGATCTTGTTATTATCATAGCGGTGGTCAGTTCAAAGCAGAAGGAAACAAGTAGCACTAGTGGGATGCGAGACAGTGTTGAAACAAGTCCCCTTTTGCAATATAGGGCCCAGGTGACTGTTTTGACTTGTACTTTTGTTTTGGCTGTTTAAAATTTTGTGATTAAATTTCTCATGATTCATAGAGGAAGTAGAGTTGGGCAGTTGGCTACCCCCTGCAAGACGATGTTAATTAATTAACTCTGGAGCATAATTTTGTGGGCTGCCATGTCAAAAGCTAGTCTCGCTGCAGGCTTGCAACGAGTAGTATATAAGAGGCCTGCAGGCAGTTAGATAGCGAGTGAGCATTGAGGCGTACGAGTAGGATGATNGTGAAGATGATGAAGCCGGTGGTGGCGCTGTTCCTAGTGACCGTCCTCATCGCCTCGCATGGTGCGATGATGCAGTGGGCGGCGGAGGCGGAGACG | |||||||||
gi|88570875|gb|CI662248.1|CI662248 CI662248 Oryza sativa (japonica cultivar-group) leaf of seedling 10mM H2O2 (10min), 24hr afte GCTCACTCTCTATCTGTCAGC EST sequence (targeted fragment marked with yellow): ATTCAGTGCACCCCAAACACCAAGAACTCCTCCTTTTTTTCTCCTGTAATAATCCTGTACCCTCTCTCTCTATCTCCCTGCAGCTGCTGCCTAGCTCCAGTACGGCCACCGTCGTCGATCGGTCTCTCTCTCTCACCGGATCCGAGAAGCAAAGAACCGATCTTTTTTCTTCTTTTTTCCCCTGCGTGATGCTTCTTGTTTACTACTACGTGGGTGCAGTGCAGGTTTGTTGATCGATCTTGGGGCGGGGCGGGATCGAGCATATGAAAGGCGAGATTGTTGACAGAAGAGAGTGAGCACACGGCGCGGCGGCTACCCATCGGCGGGATGCCTGCCCCCGCCGCGTGCTCGCTCCTCTTTCTGTCAGCATCTCTCATCACTCCC | |||||||||
gi|66931795|gb|CX118643.1|CX118643 EI116B02 A normalized whole-life-cycle cDNA library of rice Oryza sativa Indica Group cDNA cl GCTCACTCTCTATCTGTCAGC EST sequence (targeted fragment marked with yellow): TGTCATCTCTATCACGTCACTCGTCCCGAGTAACGATCATGATATCAGCATATAATACTTATACTATGATATAGATGTAGCGCAGCGATGTGGACGCCAGCTCTAGTCAAATATATATAGACCTAGAGATAGCGCTCGGTCTGGCGTAATGATGTGTGAATATAGAAGTCTAGATATATTTAGATCTTAGTAATTAAGATCATGGAAAGTTCAGTAATCTGATAGCTATTGCAGATGATAAGTGTGCGGAGAGAGAGAGAGTGAGTGAGCAGATTACAGATCTGTAACTAATCGTGAGTTGA | |||||||||
gi|117240468|gb|CT842820.1|CT842820 CT842820 Oryza sativa (indica cultivar-group) cv. Guang Lu Ai 4 Oryza sativa Indica Group cD GCTCACTCTCTATCTGTCAGC EST sequence (targeted fragment marked with yellow): GGCCAGTCGAGACGACGTGACTTTCCAAGCCCTTCTTCTTTCTTTTTTCCCCCTCGCCATAGGCGCCCTGTGCTTTGCTCGCTCGCTGCTTTTCTCTTTCTTAAAAGGCTGCTCCCTCACTCACAACTCCCTCTCTCTCTCTCTCTCTCTCCTCACCTCTTCTTGTTCTTCTTCTCTCTCTCTTGTCACTCATCATCATCACTCTTCAGCTTGCTTGGTTGGTTGGTGGAGCTTGGGAGTTGAGGTCAAATAGCCATCGATACACACTCCTCTTTCTTTTCTCTCTTCATTTCTTTCTTTACATCGTCTCTTTCTTGATTTCCCAATCTACTAAGCTCCTACTAGCTCTGTGCTCTGCTGCTCCCTCCCATCCATGGCGGCGGTTGCCAGCGACCCACCTACCTACAAGTAGCTTAAGCTCAAGCTCAGCTCAGCTCAGATCGGAGAGGGGTGGTAGAGGTAGTAGCAGTAGTTGAGAGAGAGAGAGTGAGGATGGAGAGCAGATGGAGGAAGGCCAAGATGTCGCTGGGGCTCAACCTCTGCGTCTACGTGCCCAGGACGCTGGACGACGGCGACTCGCCGTCCACCGGGTCGTCCACGGCGGCGCTGGTGTCGCCGGTGGCGTCCTCGTCGTCGGCGGCGACCAGCGCCAACACCACGCCCACGGCGGAGCAGAGGGTCAAGGGCGCCGGCGCGCTCATGCCGACCACCCCGACGCCCGACCTCCGCCGGACTTCGCCTCTCCAAATCCGGCAGCAAATCCTTCAAGAAAACATGTGCGATATG | |||||||||
gi|44679290|gb|CR292724.1|CR292724 CR292724 Oryza sativa library (Han B) Oryza sativa cDNA clone y796d03p5, mRNA sequence GCTCACTCTCTATCTGTCAGC EST sequence (targeted fragment marked with yellow): ATGAGTGTAGGTATGTATCTTATGTGTTCTGGCTGTAGTACGATGACGATCTAGTGTGAGTCTAAGTAGTGATCATAGTGACTGAGACTTGTGTTGTACTAGTTCTAGTATCGCGTATTATTCGATGACGCACGCTAGAGCGGCTGACTGTGCTAGTATGAGCTATGCTGCTAACGATCTGAGTAACTAGTATGACTCGTGCTTGAGCTTACTAGACTACTAGTCTGTTATGCAGTGAGTGATCTGGACGAGTTNAGTGAGACGATGATTGATGTAAGGCTGCTTACTGTAAGATTGAAGTATACATACAAGATAGAGTATATAGGATAATGTAGATGAGATGATAGTGTATTATATAGAGTATAGACGTAGTGTATGTATGACTAGTCACGGTGAGTGTATGTTGAGTTATAGACGATAAGTATAGACTAGAGAGTGATGACAGTAGATAGTGTGGTGTTAGACGATGTAGCTGGAGGATAGAGAGTGAGATAGACTATCGTAGAGGTGTAAGCATGAGAGAGCATTGGGTGCTGGATCGATAACTATATAGTGTGATAGTTGAATTGTTGGACGATATGTGAGGTGATGAGATAGTACGTGGAGAGTAGATGTTGGGTGGTTGTCTGTGCGTGTCTTGTGTTTAGATTGAGGCCTACTGCTTGGTGATTCGTCGCGTATATCCGTAGAATGTTGTACTAGTGGTGTATGTCATACGTTATCTGGCTTGTCGTAGTGTACTACGCGATCTCGTTGTCTGTGCGATATGTCGCTGTAGACCATAGTCGGATCGCGTCCCCGGGAGCGCTAATTCTGTTCGATGTCTCGGCTAGCTCTTACTAGCTCATTTGTGTCTATGTTGTGTATCGATGTATGTCGTAGCGTCTCGTCGTCGCGTGCTGTCTCGCGTGTTCGGAGACGATGGCGACCGAGAGAGTAGCCAGTATTGTGATCGTAGTGTTTAGGTAGTAGTTGGTGAGGTTTGGTATGATGTAGAGAGAGTAGGTGAGTGATGAAGATACGTATGATGAGAAGTGTAGTGATGTAGTGATGAGAGATGATGTATAGCAGTATTATATAAGTTAGATTGCTGATAGTGTATTATAGTATTTTGTTTGTGGTAGTATCATAGTTGAGTAAGGATAAGTGTTAATGTGTATTAGAATAGTATGAGAAAGATAAGAGTGAAGAAAGTGGATAAGTGAGAAGATAGTATGAGGAGGTAGTGTAGTGAGTAAAGGTGAGATGGCTTTATATAATGTAATGATATCTAGAAGATGAGAGTTGTATATCGCTGAGGCGTGATGGATGTGTAAGTGGAATAGGCAGCGTGGCGTCGAAGAAAGGTGAAGGGATGGAGGTATGTAGTAGAATGATGATTATAAGAAGCGGTATAGAGCGTAGGATGATAGGTGGAGTACAAGCCAGTCACGAGGGACAGGGATAGGGCGGCAGAGCTGATATGGTAAATGGAGGAGATTGGTAGTGGCGAACAGTTGGGTATGATGGGAACGTTTAATCAGAGATTACATGGATAGTATGTGAGAATTATGTCGAGTGATAGAGAGTAGCGGGTTGAGCTGGTAGTGAATGTAGATGTGGAGCGTGGTGTAGATGGGATAGGTCGGAGATTATTGTGGTTGGGTATGTAAAGTGAGATTGAGTTCGTGTAATAGGATACACTTCGTTGATAGATAAGCTTAGCATAGATATGTCTAGATAGTGGGGGATGGACTCTTAGGTGTGGTGGTGTAGATGGTGTGTGTGTGGGGCGGTTAATATGGCGTGGTAGGAGTATGGTACAGAGAGACACCG | |||||||||
gi|218486647|gb|FG954058.1|FG954058 MA_PA64s_01869 Mature embryo cDNA Library of PA64s Oryza sativa Indica Group cDNA 5', mRNA s GCTCACTCTCTATCTGTCAGC EST sequence (targeted fragment marked with yellow): AACTAGTGGATCCCCCCGGGCTGTAGACGGATCCAAGAAGAAACTTCTTCCGTTTATGATCTTTCTCTTGAGTCTTGAGGTTTATTTGGTTTTTCTTTGAGTTTTTACTCGTTTTTCTCAATTTCTCGATTTCGATGACTCGGAACTAAATAGGTTCTCTAATGACAAGTAAGAGCAAGAAATTTCTAGCACGGAGAAGCTCTCATGAGATTGACAGAAGAGAGTGAGCA | |||||||||
gi|29678682|gb|CB674957.1|CB674957 OSJNEe10F07.f OSJNEe Oryza sativa Japonica Group cDNA clone OSJNEe10F07 5', mRNA sequence GCTCACTCTCTATCTGTCAGC EST sequence (targeted fragment marked with yellow): GACCATCACCCGTCCCATCCATCTCCTCTGCTCCAAGAAGCAAACACCAAGAAACAAAGAGGGAGGGAGAGAGAGAGATAGAGGGAGAGAGTCCTTTTCTCTCACCAGCTCTCCTTTCAAGCTCAGTACGGTGGCCGCTCACCGGATCCAAGAAGAAAACCTCTCTTCCGTTTATGATTCTTTCTCTTGAGTTCTTGAGGTTTTATTTGGTTTTTCTTTGAGTTTTTACTCGTTTTTCTCGATTTCTCGATTTCGATGACTCGGAACTAAATAGGTTCTCTAATGACAAGTAAGAGCAAGAAATTTCTAGCACGGAGAAGCTCTCATGAGATTGACAGAAGAGAGTGAGCTCACGGGCCTTTGGTCGAGCATCCAATCTATTTGAATCCTCTCCCCTCGCTCTCCCTTGTGGCAGTTAATGGCGTACTCGCTGGCTTGCTGGCCTATACACATGAATGATGACGTTTATCTAACATGCGAGCCACTATCTGGCGAAC | |||||||||
gi|88425245|gb|CI564762.1|CI564762 CI564762 Oryza sativa (japonica cultivar-group) shoot Oryza sativa Japonica Group cDNA clone GCTCACTCTCTATCTGTCAGC EST sequence (targeted fragment marked with yellow): GAGTGCACCCCAAACACCAAGAACTCCTCCTTTTTTTCTCCTGTAATAATCCTGTACCCTCTCTCTCTATCTCCCTGCAGCTGCTGCCTAGCTCCAGTACGGCCACCGTCGTCGATCGGTCTCTCTCTCTCACCGGATCCGAGAAGCAAAGAACCGATCTTTTTTCTTCTTTTTTCCCCTGCGTGATGCTTCTTGTTTACTACTACGTGGGTGCAGTGCAGGTTTGTTGATCGATCTTGGGGCGGGGCGGGATCGAGCATATGAAAGGCGAGATTGTTGACAGAAGAGAGTGAGCACACGGAGCGGCGGCTAGCCATCGGCGGGATGCCTGCCCCCGCCGCGTGCTCGCTCCTCTTTCTGTCAGCATCTCTCATCACTCCCTCCCGCATCCCCCGCCCCGATCTCCCGTCGATCTCTCATCTCCGGAGAGGAGCCATCTTTTAATTTGTTTGATTTGATTTGATCTCGTTTCCTGAATTTCTTGGTGGGAAC | |||||||||
gi|88318074|gb|CI629355.1|CI629355 CI629355 Oryza sativa (japonica cultivar-group) leaf of seedling irradiated with UVC [0.7 min GCTCACTCTCTATCTGTCAGC EST sequence (targeted fragment marked with yellow): AGGAGAGAGTCCTTTTCTCTCACCAGCTCTCCTTTCAAGCTCAGTACGGCTGGCCGCTCACCGGATCCAAGAAGAAAACCTCTCTTCCGTTTATGATTCTTTCTCTTGAGTTCTTGAGGTTTTATTTGGTTTTTCTTTGAGTTTTTACCTCGCTTTTTCTCGATTTCTCGATTTCGATGACTCGGAACTAAATAGGTTCTCTAATGACAAGTAAGAGCAAGAAATTTCTAGCACGGAGAAGCTCTCATGAGATTGACAGAAGAGAGTGAGCNCNCGCGCGCGCCGCCCGGCCTCCCCCCTCTCCCGTCCCCCCCCGCCTGCTCACCCCCTCTTTCCGCTCACCCTCTCTCCTCCNAGGGCCTACTTACTATCCACATCTATAAGCAGGAAT | |||||||||
gi|88720795|gb|CI744094.1|CI744094 CI744094 Oryza sativa (japonica cultivar-group) 5 days after pollination pistil Oryza sativa GCTCACTCTCTATCTGTCAGC EST sequence (targeted fragment marked with yellow): GAGTAGTTGACAGACAGAGAGAGAGAGTAGAGGTGATGGGCAGCTCATCAGGGCTAGTGGATTGGAGGGGGAGGCCGGTGGACACCTGGAAGCATGGAGGAGTCAGGGCGTCCATCTACATCCACATGCTTGTGTGGCTGAGCAACGTGTCGAACATCGGCAACATGACGAACATCGTGAGCTACCTTAGTGTGAAGATGAACATGGGGGTGGCCGCCGCCTCCACCACCTCCGCCAGCTTCGTCGCCATGATGCAGGTCTTCACCATCCCGGNCGCCTTCCTCGCCGACTCATACCTCAAGCGCGTNNTACACCGTCCTCTTCTTCGCCCCAATAGAAATCTCGG | |||||||||
gi|29678826|gb|CB675101.1|CB675101 OSJNEe10J15.f OSJNEe Oryza sativa Japonica Group cDNA clone OSJNEe10J15 5', mRNA sequence GCTCACTCTCTATCTGTCAGC EST sequence (targeted fragment marked with yellow): CTCAGTACGGTGGCCCCTCACCGGATCCAAGAAGAAAACCTCTCTTCCGTTTATGATTCTTTCTCTTGAGTTCTTGAGGTTTTATTTGGTTTTTCTTTGAGTTTTTACTCGTTTTTCTCGATTTCTCGATTTCGATGACTCGGAACTAAATAGGTTCTCTAATGACAAGTAAGAGCAAGAAATTTCTAGCACGGAGAAGCTCTCATGAGATTGACAGAAGAGAGTGAGCATGCNTGTCTGGTACCTGACGTGACTTTTGTAAAGCATCCA | |||||||||
gi|86484691|gb|CI127324.1|CI127324 CI127324 Oryza sativa (japonica cultivar-group) Panicles more than 5cm stage and Panicles one GCTCACTCTCTATCTGTCAGC EST sequence (targeted fragment marked with yellow): CAAGTGGACGGGCTTTGGGGCGGGGCGGGTTGACTCGTTGTTTTTGGATAAGTNTGGGGAGATAGTGAAGAGGGTTTTGTAGAACAGTGGACAGAAGTAGCAGAAGACAGTCAGTGAGAAAGATAGAGCACAGGCGACAGACAGAGAGTGAGCGAGGGCGGCGTGCAGCGAGCGAGCGAAGCCAGAGGGGGCAGAGGGGGCAGAGAACAGGAGACAGAGAGAGAGGGCGAGGGCCGAGGGTGCGGGCAGACAGGGGCGGGCCGGGCAGGGCGGGGAGGACCGGGGGGGGGGGTACTTAGGAGGGAGAACGGGGAGAAAGGGCGATGGGTGCGAGGGTGGGGAGGGAAGACAGAGCGATTTAAGCTAAGGGCAAGGGAAGGGGACCAAACTGCCTCCCACGTCGGGGGGACGCCTTCTGCGAGGCACCCCGCGGGCCTGAGTCCTCCGCCTCCGGAGT | |||||||||