| mature miRNA: GCTCCGTCCCAAAATAAGTGC species: Oryza sativa database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|66930027|gb|CX116875.1|CX116875 EI106H22 A normalized whole-life-cycle cDNA library of rice Oryza sativa Indica Group cDNA cl GCTCCGTCCCAAAATAAGTGC EST sequence (targeted fragment marked with yellow): CCACACGTTACNATGCTCTGCAGGTCTGTGCTGGAATTCCGGGTCGACCCACGCTGTCGCAACTCCAACCAACCATATTCTTGCACACACGCAGCTCGAGCCATGGCCGGAGTGAGCACCAGCGTCGTCGGCCTCAAGCCCGCCGCGGCGGCCTCCTCTTCTCCGTGCGCTGCCGAGAGCGCGTGCACTGTCGCGGCGCCGCCCAAGCTAGGAGCATGCACTGGGGGCTGCACAAAAAACACGCGCGTGGGGCGCAACCCCCCCAAACTGGGTGGGGCGTTGTGGTAGCCCCATTAGGGGGGTCTTTGTGGGGGATGATACTCACCCCGGGTAATAAAAAATAAGGTGGGGGCTCTGTGTGTGGGGAGGCAGCCCACCCCTCCCATCTCGGTGGGGTGACGAGTCCCCCCCCACAGTAAAGAGATGGAAAAAAAAACCCCCAAAAATAAACACCACAAAGAGGGGGTGACATAGCACAAAACACACAAAAAAAAGAGGGGAGACAAAAAATAAAACCCACCCCCAACAGAACAAAATCTTTTTTTGGGGTCGGCTAGCAACCCAAACAAAAAAGACGAACTTTTTTTGGGGCGGAGCACGGGGGGGACAAAAGAGAAT | |||||||||
gi|88286823|gb|CI520133.1|CI520133 CI520133 Oryza sativa (japonica cultivar-group) after pollination embryo Oryza sativa Japonic GCTCCGTCCCAAAATAAGTGC EST sequence (targeted fragment marked with yellow): ACTGCAAAACTACATTTATTTTGGGACGGAGGGAGTACAACTTATATTTATCAAGTCCAAATTTTGGTACAACTAATTCCAACATTACAATGTTTTGTCGTGTCTTGTTCAACAGAAAACAGTGTAAAGCAAAAAAAAGAATTCACAGTGAGCTAATGCGATCCGCTCACCATGAACTGGCACACATTTTCGGCTACTGATTACAGTGTAACATAACAGCCAAAATCAGATTAAAGCTGGCAAATTAGTTCAAGGCGGCCGATCGAGGACTGCACCCTGACCGTTGGATCCATCAAATACAAATTTAGCGGTAGTGACGAACAACACTCACATTAACCCTCAAACTAGCCGCACGCACGCCGCGGCTGCACGTCACTGGGTCATACTCGACAAC | |||||||||
gi|88975217|gb|CI023468.1|CI023468 CI023468 Oryza sativa (japonica cultivar-group) green shoot Oryza sativa Japonica Group cDNA GCTCCGTCCCAAAATAAGTGC EST sequence (targeted fragment marked with yellow): AGTATAAAACTGCACTTATTTTGGGACGGAGGGAGTATATTCCAGATAGGAGAGGCGGGCATCGATGCTTATCGTCGCTAAATTAAATGGGAGTACAGGCTAAACACATGAGACATCCCTCGATTTAAAAACAGATTACAAACACATGGATGTTCACTTCACACACACGACAAGCAGGAGGAGGAGCAGCTGCTGAAACAAAACGACCAGCGGCGAACTTAATTTTTTTGAAAAAGGGAGAATCATAACACGGTAGAACTCATCATCATGGCCAATTGCTTCATCAACGCCTTCCAGCCATTATCCCCCAACAATGGCTGCTCGAACTCCTTTGATATCACGCGTTGCTCCTGAAGGAGCCGAGGGCTTTGATGGCGCCGGCCCGGAGGATGTACTGGTGGTAGAACGCCGCGATGGCGGCGCCGACGAACGGGCCGACCCAGAAGATCCAATGGTTGTGCCACGCCTTCTCGTTGTTGAAGATGACGGCCGCTCCGATGCTCCTGGCCGGGTTGATGCCGGTGCCGGTGATCGGGATCGTCGC | |||||||||
gi|88543266|gb|CI473259.1|CI473259 CI473259 Oryza sativa (japonica cultivar-group) 20 days after pollination pistil Oryza sativa GCTCCGTCCCAAAATAAGTGC EST sequence (targeted fragment marked with yellow): CCTTTTTTTTTTTTTTATGCTCAATTAACTGCTCTTTGACAGCCTTCGTGTTTGAAAGTGGAAAACATTTCCTTACCGTAGCAATAATGTTGCTTGCAGGTATAATTCCTAGGACAAAACTATATACTACTACCTCCGTCCCAAAATATAACAATTTTTAGCTATGAATCTGGACACANAGTTGTCTATATTTATAGTTAAAAATGCTTATATTTTGGGACGGAGGGAGTATATCATGACAGGAGAACGAATTCTACCCTACAACTTACTGATTTTTCCTGGTCTAATCTTCTGGGCCATCATGTCTTGAATTCCGTTCCAAAGATCATACTATGAACTAATTGCAGCTTCTGTATGAGAGCTGAGGTGCCACTGATCAGCAGAGATTGCAGAATGATCTTTCTGGGCTTATGCAACTCTTTTCATCTTTGTTGTCACCTCAGGAAAACCTATAATTCAT | |||||||||
gi|88472736|gb|CI410007.1|CI410007 CI410007 Oryza sativa (japonica cultivar-group) callus UVB iradiated callus, immid after trea GCTCCGTCCCAAAATAAGTGC EST sequence (targeted fragment marked with yellow): GTGAATAGTACTTTGTGTGACTAAATATTTCCAAATTTTCATAACCTTTTTTAAAAAAGACGGACTGTCACATGTCAGGCCCCGATATCCACGGCTGTACTTATTTTGGGACGGAGGAGGTACTAAACCCTAGCTAGGTCCACACATCACTATGTATAGATCGCNTCTATATATACGTACATGTCCTTGGNATCTTTGAACAGACCAAAAAAAGTATCTTCTTTGATGGAACACAAATACCGTACTTAATACACGAGTTCCGCTTGAGCTTCATTCCACCTACACNCAGCTTGACANACCGACCCTACACTGTGTAATCGAATCCTCACCACCTTCAATTCCCCTCCTGACATCACAGGCTCATGTC | |||||||||
gi|89183186|gb|CI045751.1|CI045751 CI045751 Oryza sativa (japonica cultivar-group) callus Oryza sativa Japonica Group cDNA clone GCTCCGTCCCAAAATAAGTGC EST sequence (targeted fragment marked with yellow): TTACATTTGGGACGGAGGTAGTATATTATTAGGATGGAGGGAGTAATTAAACTAGCAAGGGTTGTAAACAAATTTAGTAGTACTCGCTCCGTCTCAATAAACAAATCATGAGATGTGACGTATTCTAGTATAATGATCTGAGCAGGTTATCGCATCTCATAATATGTTTGTTTATTTTGGGACGGAGAAAGTAGGATCCAGCATAGTATAAAGTATAGGCAAGTTCATCTAATAGACAGGCTGACTGTACTAAGCTAGGCTTGTTCAGGGAGTATATAGGGAGAAGACTTCTACAATACCCGATCAGTAGGATCCCCATGGTTTCCGTTTAATAGCTTATGGAACTCTTCCTTCAGTCTGCTGTCTTTCTCCTCCTTCAACCTGCCATCCTTTTCCCTGGTACTCAATGGAAGCAAAGGTACTCCATTTGTACGATCCGGCATTTCTGGGAGTTTGTTGTCCACGAAGAATACGACTAAATTAACGGTATACCAAGCAACAACAACATCCACAGAGTAGTGTTTGCGAGAAGCAATTATAAGAAGACTCTGA | |||||||||
gi|88844487|gb|CI020334.1|CI020334 CI020334 Oryza sativa (japonica cultivar-group) green shoot Oryza sativa Japonica Group cDNA GCTCCGTCCCAAAATAAGTGC EST sequence (targeted fragment marked with yellow): ACGGTCAACGTTGAACGTGAATAGTATAAAACTGCACTTATTTTGGGACGGAGGGAGTATATTCCAGATAGGAGAGGCGGGCATCGATGCTTATCGTCGCTAAATTAAATGGGAGTACAGGCTAAACACATGAGACATCCCTCGATTTAAAAACAGATTACAAACACATGGATGTTCACTTCACACACACGACAAGCAGGAGGAGGAGCAGCTGCTGAAACAAAACGACCAGCGGCGAACTTAATTTTTTTGAAAAAGGGAGAATCATAACACGGTAGAACTCATCATCATGGCCAATTGCTTCATCAACGCCTTCCAGCCATTATCCCCCAACAATGGCTGCTCGAACTCCTTTGATATCACGCGTTGCTCCTGAAGGAGCCGAGGGCTTTGATGGCGCCGGCCCGGAGGATGTACTGGTGGTAGAACGCCGCGATGGCGGCGCCGACGAACGGGCCGACCCAGAAGGTCCAAT | |||||||||
gi|86493338|gb|CI135971.1|CI135971 CI135971 Oryza sativa (japonica cultivar-group) mixed callus (Normalized Library) Oryza sativ GCTCCGTCCCAAAATAAGTGC EST sequence (targeted fragment marked with yellow): ATAAATTTTTCAAATAAGACGAACGGTCAAACGTCGGACACGGTTCCCTACGACTGCACTTATTGTGGGACGGATGTAATATCAATTTGTCACAACTATTTATGACTAGAATGAACAAATTCAGTGATGCAAATAGATGCTACTGTTGTGAGGAATCAACTCATATGGATCGATCCATCATAAGAGACATGACTAGAGTGTGAGGCCAATAACATCAACTGTCTACATCTTATCCCCAACTCGGGTAATGGAACAAACTGACATTTTTCATCTTGCATTACCATTTCCCCAAATAAGTTCTCCATAACTACTCTATTGTCATGCCTGACGAACTGAAAAGACTGTATTGTGAGATAAAAAGATTGGAGTATTTGTGCTGACCTGATGCAGGATCATGGGCTTGTTCCCGAAATCGACGAGCGGCTTTGGCACGCTGAGAGTCAGCGGCCGCAGGCGAGTGCCGAAGCCTCCCACGAGAATGAGCGCCTTCATGGTCGCAGCCCTGCTAACTCAGCTCCTCCTCACCCTGCGAAAAATGCAGCAAGCAGCATAAGAACGATGAGACGATCTGATCTGATCTAATCCAGAACCCGCTTAATGCCCGCGTGATCACGGAGGCCACAGTGCGGGAGTCGGGACA | |||||||||
gi|88976904|gb|CI257600.1|CI257600 CI257600 Oryza sativa (japonica cultivar-group) same as Lib 23(supermix) Oryza sativa Japonic GCTCCGTCCCAAAATAAGTGC EST sequence (targeted fragment marked with yellow): TTTTTTTTTAGACATAAAAACCCACAAATGAATTTATTTTGGGACGAAGGGAATATTAGGCTGTAGCAACAGGATTAGTGTACACGATCTACGACAAGTTGTCACAGTAATAATGGGCACAATCTTGATACATATAATAACATATGTACCAGTTTCCCTTGCATTCCATGGAAAGCAGTTGCTTGCCGTGGCCATGAGAGGCGTCAGCATTTTCACCACATCGATCTCCTTCCTTCTCGCGCTCACCATTGCTCTTGCAGAAGATCAGAGAAGCTCCCTTGCAAGGGGTTCCTCAATCTCCACCCAAGATGACACCACCACCATCCTTGTGTCCCCCAATGGCCACTTCTCATGTGGCTTCTACAAGGTGGCCACCAACGCCTTCACCTTCTCCATCTGGTTCTCCAGGTCGTCGGAGAAGACCGTCGCGTGGACGGCGAACCGCGACGCTCCGGTGAACGGCAAGGGCTCCAAGCTCACCTTCCGGAAGGACGGGAGCCTGGCCCTTGTTGATTACAACGGCACGGTTGTGTGGAGCACCAACACCACGGGCACTGGCGCTAGCCGTGCAGAGCTTGACGACAGCGGCAACCTCGTCGTCATGGATCCAGCCGGTCATCGCCTCTGGA | |||||||||
gi|55409443|gb|CV721819.1|CV721819 YBH--05-G23.b1 Rice before heading yeast two hybrid lambda phage cDNA library (YBH) Oryza sat GCTCCGTCCCAAAATAAGTGC EST sequence (targeted fragment marked with yellow): GGCACGAGGACTACTTTACCGTGAAACCTGATGGTTGAAATGGTTTAAAGTGGTCTGAAATGCATGAATGGTCCTAGCGCATAACTGACCCGAGCTTAGAAACTGGTTCTGTTTTTCCTCTTTCCCGGTTAAGCTGCTGATCCGGTTCGGTTTTTTCAACTATGATTCTCGCATGTAAAAAAATGTACAAATTCAACACTACTCCCTCCGTTCCAAAATAACTTCATTTTTCATCATCTTATTTGTCCCAAAATAGCTTCATCTTTCAAGCAATCATTGCATTGGAGTTTATGGAAGTGGGGAACAAATGCATTGGGACTAGATAAATTTGGGAACAACCGCATTCGGATTTGATAAAGTAGAGGGCATTTTTGTCTTTTTGCTTTTGTATTGGTATGTGTCTGATGGGTAAAAAATGAAGTTATTTTGGGACGGAGATTGTAGAATCTTATG | |||||||||
gi|88471382|gb|CI408653.1|CI408653 CI408653 Oryza sativa (japonica cultivar-group) leaf of seedling gamma-irradiated (9.5min), a GCTCCGTCCCAAAATAAGTGC EST sequence (targeted fragment marked with yellow): CTTTTTTTTATCATCCAATAACAATAAAAATATTAATCATAAAAAAATTTCAAATAAGACGAATGATCAAAAGTTGAACATGAACCGTGCAAAACTGCACTTATTTTGGGACTGAGGGAGTAGTGCTGTGGCTTGTCAGTTCCACAAAGCATACTACTCGTCCATAAAAAAAATTTGGTCATATGTACGTTTGCAGCTTGCAGGCTTCCATTCCAAAACCTCACTGTCTGCCTATATCTGCATGTTTGGGTGTATGTGATTGCTTCTTTGCAGGACAGAGACAATATGATCTTCCTCGTGTTCTATGTGTTTGTGGTGTTACTAGGAGAGTTCTGCTCCTCTTGCTCTTGTGCTCAGGTTGGTTTCAGTAGTCCACCTCCTACCATGCACAAGCTT | |||||||||
gi|86838202|gb|CI343372.1|CI343372 CI343372 Oryza sativa (japonica cultivar-group) flower Oryza sativa Japonica Group cDNA clone GCTCCGTCCCAAAATAAGTGC EST sequence (targeted fragment marked with yellow): GGACACGGAAACCCAGGGTTTGCCTTTTTTTTGGGACGGAGGGAGTACTCGGCTGGTCAGTGCAGGCGCTGCAGCAGCCGCCCGCTAGCGGCTGCTGATGTTGCAGCTGCAGACATAACATACTGTTTGGGTTGGCTGTACAACAGTTAAATTAAGTGCAGCCGAACGGAGCCAATTTCGGCTTCAGTTCTTTCCTGATGGACAGGGACGAAGTTGCAGCGTGATCGAAGCGGCGCCGAAGAGAAGGATGACAATTTGACAAAGCAGCGAGCTCATGACTTCTTGCCGCCGAAGCCACCAGACGGTACTGACGGCTGGAACATGGCCGTCCTACACTTTTGTGTAGAGCATAGGCCTCTATGGTAATCCAATCGAAACATCGCCGCCTTCTCCCATGTCATCATGTCCGCCTTGCCCCCCTGCACCCAATCACGCCGCGTCCACCTCCCCGCGCATTTAGGACGCCACATCACTCTCGT | |||||||||
gi|89180069|gb|CI044348.1|CI044348 CI044348 Oryza sativa (japonica cultivar-group) callus Oryza sativa Japonica Group cDNA clone GCTCCGTCCCAAAATAAGTGC EST sequence (targeted fragment marked with yellow): GAACTGTGAATAGTATAAAACTGCACTTATTTGGGACGGAGGGAGTATATTCCAGATAGGAGAGGCGGGCATCGATGCTTATCGTCGCTAAATTAAATGGGAGTACAGGCTAAACACATGAGACATCCCTCGATTTAAAAACAGATTACAAACACATGGATGTTCACTTCACACACACGACAAGCAGGAGGAGGAGCAGCTGCTGAAACAAAACGACCAGCGGCGAACTTAATTTTTTTGAAAAAGGGAGAATCATAACACGGTAGAACTCATCATCATGGCCAATTGCTTCATCAACGCCTTCCAGCCATTATCCCCCAACAATGGCTGCTCGAACTCCTTTGATATCACGCGTTGCTCCTGAAGGAGCCGAGGGCTTTGATGGCGCCGGCCCGGAGGATGTACTGGTGGTAGAACGCCGCGATGGCGGCGCCGACGAACGGGCCGACCCAGAAGATCCAATGGTTGTGCCACGCCTTCTCGTTGTTGAAGATGACGGCCGCTCCGATGCTCCTGGCCGGGTTGATGCCGGTGCCGGTGATCGGGATCGTCGCCA | |||||||||
gi|88537534|gb|CI464489.1|CI464489 CI464489 Oryza sativa (japonica cultivar-group) 3rd week immature panicle Oryza sativa Japoni GCTCCGTCCCAAAATAAGTGC EST sequence (targeted fragment marked with yellow): GACGGTCAAACGTTGAACGTGAATAGTATAAAACTGCACTTATTTTGGGACGGAGGGAGTATATTCCAGATAGGAGAGGCGGGCATCGATGCTTATCGTCGCTAAATTAAATGGGAGTACAGGCTAAACACATGAGACATCCCTCGATTTAAAAACAGATTACAAACACATGGATGTTCACTTCACACACACGACAAGCAGGAGGAGGAGCAGCTGCTGAAACAAAACGACCAGCGGCGAACTTAATTTTTTTGAAAAAGGGAGAATCATAACACGGTAGAACTCATCATCATGGCCAATTGCTTCATCAACGCCTTCCAGCCATTATCCCCCAACAATGGCTGCTCGAACTCCTTTGATATCACGCGTTGCTCCTGAAGGAGCCGAGGGCTTTGATGGCGCCGGCCCGGAGG | |||||||||
gi|86540226|gb|CI180432.1|CI180432 CI180432 Oryza sativa (japonica cultivar-group) supermix Oryza sativa Japonica Group cDNA clo GCTCCGTCCCAAAATAAGTGC EST sequence (targeted fragment marked with yellow): TGAACGTGAATAGTATAAAACTGCACTTATTTTGGGACGGAGGGAGTATATTCCAGATAGGAGAGGCGGGCATCGATGCTTATCGTCGCTAAATTAAATGGGAGTACAGGCTAAACACATGAGACATCCCTCGATTTAAAAACAGATTACAAACACATGGATGTTCACTTCACACACACGACAAGCAGGAGGAGGAGCAGCTGCTGAAACAAAACGACCAGCGGCGAACTTATTTTTTTGAAAAAGGGAGAATCATAACACGGTAGAACTCATCATCATGGCCAATTGCTTCATCAACGCCGTCCAGCCATTATCCCCCAACAATGGCTGCTCGAACTCCTTTGATATCACGCGTTGCTCCTGAAGGAGCCGAGGGCTTTGATGGCGCCGGCCCGGAGGATGTACTGGTGGTAGAACGCCGCGATGGCGGCGCCGACGAACGGGCCGACCCAGAAGATCCAATGGTTGTGCCACGCCTTCTCGTTGTTGAAGATGACGGC | |||||||||
gi|86534860|gb|CI175066.1|CI175066 CI175066 Oryza sativa (japonica cultivar-group) supermix Oryza sativa Japonica Group cDNA clo GCTCCGTCCCAAAATAAGTGC EST sequence (targeted fragment marked with yellow): TTTTTTTGAACGTGAATAGTTAAAACTGCACTTATTTTGGGACGGAGGGAGTATATTCCAGATAGGAGAGGCGGGCATCGATGCTTATCGTCGCTAAATTAAATGGGAGTACAGGCTAAACACATGAGACATCCCTCGATTTAAAAACAGATTACAAACACATGGATGTTCACTTCACACACACGACAAGCAGGAGGAGGAGCAGCTGCTGAAACAAAACGACCAGCGGCGAACTTAATTTTTTTGAAAAAGGGAGAATCATAACACGGTAGAACTCATCATCATGGCCAATTGCTTCATCAACGCCTTCCAGCCATTATCCCCCAACAATGGCTGCTCGAACTCCTTTGATATCACGCGTTGCTCCTGAAGGAGCCGAGGGCTTTGATGGCGCCGGCCCGGAGGATGTACTGGTGGTAGAACGCCGCGATGGCGGCGCCGACGAACGGGCCGAACCAGAAGATCCAATGGTTGTGCCACGCCTTCTCGTTGTTGAAGATGACGGCCGCTCCGATGCTCCTGGCCGGGTTGATGCCGGTGCCGGTGATCG | |||||||||
gi|86259434|gb|CI008111.1|CI008111 CI008111 Oryza sativa (japonica cultivar-group) etiolated shoot Oryza sativa Japonica Group c GCTCCGTCCCAAAATAAGTGC EST sequence (targeted fragment marked with yellow): CTTGAACGTGATAGTATAAAACTGCACTTATTTTGGGACGGAGGGAGTATATTCCAGATAGGAGAGGCGGGCATCGATGCTTATCGTCGCTAAATTAAATGGGAGTACAGGCTAAACACATGAGACATCCCTCGATTTAAAAACAGATTACAAACACATGGATGTTCACTTCACACACACGACAAGCAGGAGGAGGAGCAGCTGCTGAAACAAAACGACCAGCGGCGAACTTAATTTTTTTGAAAAAGGGAGAATCATAACACGGTAGAACTCATCATCATGGCCAATTGCTTCATCAACGCCTTCCAGCCATTATCCCCCAACAATGGCTGCTCGAACTCCTTTGATATCACGCGTTGCTCCTGAAGGAGCCGAGGGCTTTGATGGCGCCGGCCCGGAGGATGTACTGGTGGTAGAACGCCGCGATGGCGGCGCCGACGAACGGGCCGACCCAGAAGATCCAATGGTTGTGCCACGCCTTCTCGTTGTTGAAGATGACGGCCGCTCCGATGCTCCTGGCCGGGTTGATGCCGGTGCCGGTGATCGGGATCGTC | |||||||||
gi|88508435|gb|CI435941.1|CI435941 CI435941 Oryza sativa (japonica cultivar-group) 4th leaf leaf 3mM SA(salicylic acid) for 1 da GCTCCGTCCCAAAATAAGTGC EST sequence (targeted fragment marked with yellow): ATTTTTTGTGGCGTGCACCTCAATAATATTCATTTTGTGACGCAGAGCTAGTATAAGATATTGACATCTTTTCGCGGAGAAAGATGTGGAAATTTTTGTTCTTATCTATTTTTGCTTTCTTCTGCGTATGCTCAATTAACTGCTCTTTGACAGCCTTCGTGTTTGACAGTGGAAAACATTTCCTTACCGTACCAATAATGTTGCTTGCAGGTATAATTCCTAGGACAAAACTATATACTACTACCTCCGTCCCAAAATATAACAATTTCTAGCTATGAATCTGGACACACAGTTGTCTATATTTATAGTTAAAAATGCTTATATTTTGGGACGGAGGGAGTATATCATGACAGGAGAACGAATCCTACCCTACAACTTACTGATTTTTCCTGGTCTAATCTTCTGGGCCATCATGTCTTGAATTCCCGTCCAAAGATCATACTATGAACTAAGCTGCAGCTTCTGTATTAGAGCTGAGGT | |||||||||
gi|88974458|gb|CI021999.1|CI021999 CI021999 Oryza sativa (japonica cultivar-group) green shoot Oryza sativa Japonica Group cDNA GCTCCGTCCCAAAATAAGTGC EST sequence (targeted fragment marked with yellow): TTTTTGAAACGTGATAGTATAAAACTGCACTTATTTTGGGACGGAGGGAGTATATTCCAGATAGGAGAGGCGGGCATCGATGCTTATCGTCGCTAAATTAAATGGGAGTACAGGCTAAACACATGAGACATCCCTCGATTTAAAAACAGATTACAAACACATGGATGTTCACTTCACACACACGACAAGCAGGAGGAGGAGCAGCTGCTGAAACAAAACGACCAGCGGCGAACTTAATTTTTTTGAAAAAGGGAGAATCATAACACGGTAGAACTCATCATCATGGCCAATTGCTTCATCAACGCCTTCCAGCCATTATCCCCCAACAATGGCTGCTCGAACTCCTTTGATATCACGCGTTGCTCCTGAAGGAGCCGAGGGCTTTGATGGCGCCGGCCCGGAGGATGTACTGGTGGTAGAACGCCGCGATGGCGGCGCCGACGAACGGGCCGACCCAGAAGATCCAATGGTTGTGCCACGCCTTCTCGTTGTTGA | |||||||||
gi|87036416|gb|CI191038.1|CI191038 CI191038 Oryza sativa (japonica cultivar-group) root of seedlings Oryza sativa Japonica Group GCTCCGTCCCAAAATAAGTGC EST sequence (targeted fragment marked with yellow): TTTTTGACGGTCAAACGCTTGAACGTGAATAGTATAAAACTGCACTTATTNTGGGACGGAGGGAGTATATTCCAGATAGGAGAGGCGGGCATCGATGCTTATCGTCGCTAAATTAAATGGGAGTACAGGCTAAACACATGAGACATCCCTCGATTTAAAAACAGATTACAAACACATGGATGTTCACTTCACACACACGACAAGCAGGAGGAGGAGCAGCTGCTGAAACAAAACGACCAGCGGCGAACTTAATTTTTTTGAAAAAGGGAGAATCATAACACGGTAGAACTCATCATCATGGCCAATTGCTTCATCAACGCCTTCCAGCCATTATCCCCCAACAATGGCTGCTCGAACTCCTTTGATATCACGCGTTGCTCCTGAAGGAGCCGAGGGCTTTGATGGCGCCGGCCCGGAGGATGTACTGGTGGTAGAACGCCGCGATGGCGGCGCCGACGAACGGGCCGACCCAGAAGATCCAATGGT | |||||||||
gi|86866968|gb|CI343821.1|CI343821 CI343821 Oryza sativa (japonica cultivar-group) flower Oryza sativa Japonica Group cDNA clone GCTCCGTCCCAAAATAAGTGC EST sequence (targeted fragment marked with yellow): GCAATTATTATGGGACGGAGGTAGTAATTGTTAGTACAAGGAATTATATTACAAGTTGCATTTTAAAGACAAACACGTTTAGTTTTACCAGTAGAAGATGCATAAAGTATCTGCTTGCATGATGAACTTAATGTTTCCATACTTGGGTAACCCATCTCCCCGTGTTACCATCCATCTTTCTGCAACCCTCCATTCACAGCACATCGCATTTCCGTCGGAACATGAAACCACCATTCTTTTATTCCATTAAACCTTGTTGCTACAAGATAAGTGAATTAACTGTACAGAAAAACTAATGTACAGGCACCGTAGGGGAAGAAATATTTATCAGCTGCTTGACGTGATGTATCTACACAGATTTCACTGGTCCCGATCACGATCACGATAAATTGGCTGGGGGGTCCACTTGAAGTGCAAGTTCAGCTTTCCGGATTTAGCACCTTGCAAAACAAACTCATCCTGAAAATCGGCTTCGAGTATTACTCTCGTAAGTGTCAAGATGCATCTCCTATGTATCTTTCCAAACGTATTATGATTCCATATTTCAACATG | |||||||||
gi|29613006|gb|CB618019.1|CB618019 OSIIEa01J16.f OSIIEa Oryza sativa Indica Group cDNA clone OSIIEa01J16 5', mRNA sequence GCTCCGTCCCAAAATAAGTGC EST sequence (targeted fragment marked with yellow): GCTAGATAGTGCAATGAAAGTATCTTCTAGTCCCTCCGTGCCATTATAAGGGCAGCCATAAATTTCCGTGGCCAACGTTAGACTGTCCATCTTATTAGAAAAATTTATGAAAAAAATTGAAAAGTTTAGTGACGCATAAAGTACTATTCATATTTTATCGTCTAATAACAATAAAAATACTAATCATAAAAATATTTCAAATAACACGGATAAAACTGCGCTTATTATGGGACGGAGGGAGTATGTAACTATGGCATGTAGACCACAGTTTAACATGAACAGATGAAAATTCTTCCATCTTAACCTTTTGAACTCGCATTTTATCTTATTCTAAATCAAAGAGGCTTCCTACTTACCAACCATGAATATAAGAACTTTATGATGTCCATATTCATGCAACTTGGCAATACCTAGCAAAATAACACAAAATAGAATACGTCTTTTTTCATACCTATAGCGATCTATGGAGTGACTTTTACGAAATATGCTAGACTGCGACTAATAAACCTTTAGGTCATTGGGTAAATAAAATATTGCTGAGAAGACAAGCAAGCAGCGTTGGTTGAACAGAAGAGAGAACATTATAGATTGGAATGATGAACTTCGGGTAGAAACTTTGGTTGATGTGAATGGTAGATGTGTCTTGTTCTTTGTAG | |||||||||
gi|88831676|gb|CI369358.1|CI369358 CI369358 Oryza sativa (japonica cultivar-group) callus Oryza sativa Japonica Group cDNA clone GCTCCGTCCCAAAATAAGTGC EST sequence (targeted fragment marked with yellow): CGCACAATAAACATATACTTCCTCCGTTACAAAATATAACCTTTGGGACATATCCTAATACAATAAATCTAAATACATTCGTTGCATTAGGACGTGTCCTATATAGTACAAGCTTGCTTTATTTTGGGACGGAGCGAGGGAGTAGTTATGAACGGAATCTTCAGAAAACTGTCGGTATGGTTTATTCAGCCGCGCGTCATAATGGTGGTATGATTTCCACGAAAAAGAAAAACTGTAGCTTCTACCTGAAGCTTAACACTGGAGGTTACCTAGCTATATTTGTTCCCTTCATTTAAGAAAAAAAAATCAAATCCTAATAATAAATCTGAACATGTAAATGTCTAGTAGCTTCATAACTAAGATTTGATAAGCACATACTTCGAAGGAGCCATGGCAGTGCGACGCCTGCAAGCAGCCCGGGTTCGGCGAGCTGTACGCCCTGCGACGCCTGCGGCT | |||||||||
gi|88961531|gb|CI096812.1|CI096812 CI096812 Oryza sativa (japonica cultivar-group) Panicles more than 5cm stage Oryza sativa Jap GCTCCGTCCCAAAATAAGTGC EST sequence (targeted fragment marked with yellow): TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAGGTACCTGAAAGCTTAATCATTCGATTATGTGCAACTTCGTAAAAATATTATCTAGTGACATGTCACTATTCATATGCACAATGATACCAAGTTGGTCACAAAAGTATGTGGAGTACGTGTCTTTTCCTCTTAGCAGGTGACGGGTACCTAGTACGTATACTCCCTTCGTCTCAGAAAAAAAGGCAAACCCTGAATTTTCGTGTCCAACTTTGACTGTCCGTCTCATATGAAATTTTTTTATAATTCGTATTTTCATTGTTGTTAGATAATAAAACATGATTAATATTTTATGCGTGACTTGTCTTTTTAATTTTTTTCATAATTTTTTCAAATAAGACGGACGGTCAAACGTTAGACACGGCAACCCGGGTTTGTCTTTATTTTGGGACGGAGGGAGTGTACCTACGCAGCCATCTACTTGCGGA | |||||||||
gi|86483952|gb|CI126585.1|CI126585 CI126585 Oryza sativa (japonica cultivar-group) Panicles more than 5cm stage and Panicles one GCTCCGTCCCAAAATAAGTGC EST sequence (targeted fragment marked with yellow): TTTTTTTTTTTTTTTATCCACATTAGGAAGCCTAATTGCAGTCAGGATCATGATACAGTGACAGCAAGTGGCTATTAATGAAAGCTGATGACGTGCGTAGCGTAACCCAAAGTGATGTGATTATCATGTGAAGCAGTGGACGCCCATAATTGCTACTATTCATATTTTATCATCTAATAACAATAAAAAATACTAATAAAAAAATTTCAAATAAGACGAACGGTCAAACGTTGAACATGAACCGTACAAAACTGTATTTATTTTGGAACGGAGGGATTACTCACCAGAATATTCAACAGTGTCCTGTAAAAAAAAAAGAGAGGAACCATTGTTTTTCAGAACCGTGCTAGAGAAGAATAAAAGAACAGGTTCTCAAATTAATGTGACCTGGTCTTTCATCACTTGGCATTTCCGTATCATCAAAGGGTGGATCCAACTTGATTTTCAGCGCATCAGCGATGATCCTATATCCAAATTAATACTAC | |||||||||
gi|88247417|gb|CI247266.1|CI247266 CI247266 Oryza sativa (japonica cultivar-group) Shoot and root of germinating seeds Oryza sat GCTCCGTCCCAAAATAAGTGC EST sequence (targeted fragment marked with yellow): TTTTTTTTTTTTTTTTGAACGTGAATAGTATAAAACTGCACTTATTTTGGGACGGAGGGAGTATATTCCAGATAGGAGAGGCGGGCATCGATGCTTATCGTCGCTAAATTAAATGGGAGTACAGGCTAAACACATGAGACATCCCTCGATTTAAAAACAGATTACAAACACATGGATGTTCACTTCACACACACGACAAGCAGGAGGAGGAGCAGCTGCTGAAACAAAACGACCAGCGGCGAACTTAATTTTTTTGAAAAAGGGAGAATCATAACACGGTAGAACTCATCATCATGGCCAATTGCTTCATCAACGCCTTCCAGCCATTATCCCCCAACAATGGCTGCTCGAACTCCTTTGATATCACGCGTTGCTCCTGAAGGAGCCGAGGGCTTTGATGGCGCCGGCCCGGAGGATGTACTGGTGGTAGAACGCCGCGATGGCGGCGCCGACAAACGGGCCGACCCAGAAGATCCAATGGTTGTGCCACGCCTTCTCGTTGTTGAAGATGACGGCCGCTCCGATGCTCCTGGCCGGGTTGATGCCGGTG | |||||||||
gi|86878631|gb|CI340551.1|CI340551 CI340551 Oryza sativa (japonica cultivar-group) flower Oryza sativa Japonica Group cDNA clone GCTCCGTCCCAAAATAAGTGC EST sequence (targeted fragment marked with yellow): GGCCAGCAATACTTTCTTCACGCATTGAGTGCAACAATTATGATACAAAACAGACCATTTCTTTCCCTAACAATGCATCAAAACACTACACTGCAGCCTCCAAATTTATCCCAAAATCTCAGCTAAAGAAGCTAGTATCTACTACCTCCGTCCCAAAATAAGTGCAGCCATAGATATGCGTACTCAGGGTTTTGACCATCCGTCTGTTTGAAAAATTTATAAAAAATATTTAAAAATTAGTCACACATAAAGTACTATTCATGTTTTATCATCTAATAACAATAAAAATACTAATCATAATCTTTTTTCAAATAAGACGAAGGGTCAAATGTTGGACATGAACAGTGTTAAAACTGGACTTATTTTGGGACGGAGAGAGTAGCTAGCTAAACGCCCGGCTAGGGGGCTACTCTACCAGTACTGCTACAACCACCATGTCTAGGCTGATGTGCTGCTTGCTAATGCTGCTAC | |||||||||
gi|86540271|gb|CI180477.1|CI180477 CI180477 Oryza sativa (japonica cultivar-group) supermix Oryza sativa Japonica Group cDNA clo GCTCCGTCCCAAAATAAGTGC EST sequence (targeted fragment marked with yellow): TGAACGTAATAGTATAAAACTGCACTTATTTTGGGACGGAGGGAGTATATTCCAGATAGGAGAGGCGGGCATCGATGCTTATCGTCGCTAAATTAAATGGGAGTACAGGCTAAACACATGAGACATCCCTCGATTTAAAAACAGATTACAAACACATGGATGTTCACTTCACACACACGACAAGCAGGAGGAGGAGCAGCTGCTGAAACAAAACGACCAGCGGCGAACTTATTTTTTTGAAAAAGGGAGAATCATAACACGGTAGAACTCATCATCATGGCCAATTGCTTCATCAACGCCGTCCAGCCATTATCCCCCAACAATGGCTGCTCGAACTCCTTTGATATCACGCGTTGCTCCTGAAGGAGCCGAGGGCTTTGATGGCGCCGGCCCGGAGGATGTACTGGTGGTAGAACGCCGCGATGGCGGCGCCGACGAACGGGCCGACCC | |||||||||
gi|40490550|gb|BX899986.1|BX899986 BX899986 Oryza sativa library (Han B) Oryza sativa cDNA clone p841e02p3, mRNA sequence GCTCCGTCCCAAAATAAGTGC EST sequence (targeted fragment marked with yellow): GGTAGCTGAATGGGCGCATCATTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTCCAGCAACTCAAATTGGTCGCCAACTCTCACCATTTTTTCTGAATTCCAGGTGTTTCTAGTTCTCCTCTAGTTCGTGATTCTGTCCGATTTTTCCATTTACATCCATACACATTCTCTGGCCTCCTTCTAGAAGACGATATCGCTTTTATTATTTTGGGCTATTGCGTGAAGGGTTGGAACCTTCCACTTTCGTATATAGTAAAAAGAAAAAAAAATATTAACTGCATACTTTCTCTGTCAAAAAAACCCAATCTAAAAATATGACCCCTCCTAGTATAATCCAGAATCGTTCTACTAGGAAAGGATTGGCTTATTTTGGGACGGAGAGAGTAGTAAGTAGATCATCTTCTAGTCTACGTCTCCAGATTAATATCTTCCCGATTCGAAAGGTAATAACGGAAG | |||||||||
gi|87024769|gb|CI261278.1|CI261278 CI261278 Oryza sativa (japonica cultivar-group) Shoot and root of germinating seeds Oryza sat GCTCCGTCCCAAAATAAGTGC EST sequence (targeted fragment marked with yellow): TTAGCACAAAAATATTAATTATAAAAAAATTTTAAATAAGACGAACGGTCAAACGTTGAATATGAATAGTGTAAAACTACACTTATTTTGGTACGGAGGGAGTAGTGCTTAATTAATTACCATCCCCCTATACGTGTGCTACGGAGCAGATAGTACACTATACAGATTAAAGCGACACGCTCGATCGATCGATGCATATGTACAGAACTGCATCATATATATATAGAGTACATGCAGCCAGACCAGCTAACAATAAGCAATAACCAGAGCACGTACATAATACACTAGCTAAAGGCAGATAATTGAGGAGTACAGAGTACCTTTTTTTTTAGAATTCGTAAGTACGTACTAGGTACCTGTTCCTCCTCTGCATCCTCTCGTTGATGATCTACTTAGTCAACCAGATTAATTACTAAGTAATTCGGATCGAGAGATTAATCTGCAATAGCTAGCTGGGCGTGGAGCGAGGAGCTGTAGCCGACGACCTGGACGGCTGCCTGCTGCTCGATCTCCCAACGCAGCTTGGGCGTCTCCGGGTCGCCCTCCTGCTACACCGGCACGTACTCCTCGAGCTTGTGGA | |||||||||
gi|88250930|gb|CI248781.1|CI248781 CI248781 Oryza sativa (japonica cultivar-group) Shoot and root of germinating seeds Oryza sat GCTCCGTCCCAAAATAAGTGC EST sequence (targeted fragment marked with yellow): TTTTTAAAAACGGAGGTAGTACTATTTATTTTTCCTTGCATCACGAAATCCAAGTCATACATTCCTATCCTAAACTGATTGATCCTAGATNACAATATTCAATTTCATCTGCATGCTCCCTCCGTCCAAAAAAAAGACAAACTCTGGTTTCCGTGTCCAACGTTTGACCGTCCGTCTTATTTGAAAAAATTATGAAAAAAAAATTAAAAAGACAAGTCACGCATAAAATATTAATCATGTTTTATCATCTAACAACAATGAAAATACGAATTATAAAAAAAATTCATATAAGACGGACAATCAAAGTTGGACACGGAAACCCAGGGTTTGTCTTTTTTTGGGACGGAGCGAGTAGACCGCTAATAATCTGACCAATTCTGGCACCTAAATCTTTACCAATCACACCATGACATCACAGAAAGTCCTCCACTTCTTCCCGTCTTCCTGTATGAACTTGTGATGCCACGGACCAGATGTGAACCCTTCCTGGAACAGCAACCTAACTGCAGGTCGTCGGAGCACACCGTTGACCTAGCTCCAGGACAGCAACATCACGCTCAGCAAAGGCTTG | |||||||||
gi|58695475|gb|CK084162.1|CK084162 84740rsicen_25969.y1 Oryza sativa cv. LYP9 booting whole plant cDNA library Oryza sativa Indi GCTCCGTCCCAAAATAAGTGC EST sequence (targeted fragment marked with yellow): GATCCCCGGGCTGCAGGTATTGTACTGTTATACTTCTGTTGATGAAAATATATTAAAAATTCCATCACAATACCTATATGTCACACAGGCAGCATGGAAGGTCATATCTTGGTGTTCTGGACTCTGATATAGGTTCTGTTTCATTGCTTGACACCCCCTTCACTGATTTATCCAATGTGGTTACTGGAAATGATTACTTCTATATTGAAGGTGCATCTGCAACTGTTCCAATGTCAATCGCAAAGGTAGCTTTAAATGAGGACAGAACAAAAGTAGTTAGTTTCTCAATAATTTGGTCATCCTCATCAGATGTTGTACAATATAGTTCTTTCTTCAGTGCACCAGAATTTGTTGAGTTTTCAACATCCAGCACCGGCCAGAAAGCTTATGCATATTTCTACCCACCTTCAAACCCAAATTTTCAAGGTTTGCCAGACGAAAAACCTCCATTGCTTGTCAAAACACATGGAGGACCAACAGCAGAAACACGTGGAATTCTGGACCTGAGTGTTCAGTATTGGACAAGTCGAGGATGGGCATATCTTGATGTTAACTATGGGGGAAGCACTGGTTTTGGGAGGGAGTATCGAGAGAGGCTATTGGGGAAATGGGGTATCGTCGATGTTGATGATTGTTGCAGCTGTGCAAGAGTCCTGGTGGAGAGTGGGAAAGTAGATGAGCGACGCCTTTGTA | |||||||||
gi|89173067|gb|CI040960.1|CI040960 CI040960 Oryza sativa (japonica cultivar-group) etiolated shoot Oryza sativa Japonica Group c GCTCCGTCCCAAAATAAGTGC EST sequence (targeted fragment marked with yellow): TTTTTACGACGGACGGCAAACGTTGAACGTGAATAGTATAAAACTGCACTTATTTTGGGACGGAGGGAGTATATTCCAGATAGGAGAGGCGGGCATCGATGCTTATCGTCGCTAAATTAAATGGGAGTACAGGCTAAACACATGAGACATCCCTCGATTTAAAAACAGATTACAAACACATGGATGTTCACTTCACACACACGACAAGCAGGAGGAGGAGCAGCTGCTGAAACAAAACGACCAGCGGCGAACTTAATTTTTTTGAAAAAGGGAGAATCATAACACGGTAGAACTCATCATCATGGCCAATTGCTTCATCAACGCCTTCCAGCCATTATCCCCCAACAATGGCTGCTCGAACTCCTTTGATATCACGCGTNGCTCCTGAAGGAGCCGAGGGCTTTGATGGCGCCGGCCCGGAGGATGTA | |||||||||
gi|89167664|gb|CI109065.1|CI109065 CI109065 Oryza sativa (japonica cultivar-group) Panicles less than 5cm stage Oryza sativa Jap GCTCCGTCCCAAAATAAGTGC EST sequence (targeted fragment marked with yellow): GCAAGGTTACATCAATTTCTTAGAGGTATAAGGAGGGATGTAAAAGAAGTCTACATTAATACTACCACCATCCCAAAAATAGTGCATTTCTCACTACCTGGACAGCACTCTTTTTGGGACGGAGGTAGTAAAAGATAAAAACATTAAGTCTGGTTTTGTACACTATGAACAAATATATTGCCATGGAGCTATGAAGAACATCAAGTGCTATGCTCAAGAAAGATATACAGGATACAACAGTGGCAGTTAGACCAGCTGCCACAGATAAACCAACTAAATAACTTCCATGAAATGAAAGTGAAAACTAAAAACCGCTGAATGTGAATGAACAAAAGGTAACATGTACTTGGCAATAGAAATGTATCAAAAACAAGGGAGTCCTCAGCAACTATAGAAGAAAATCCTGGATTATAGGAGCTTGAGGTACATCAGGTTGAGTGCAATGCCTTTCTCTATGCTTATGTTTTCCTTGACGATGCCCACTCCTAGATCTTCTGTGTTTTCTCGCTTCCCTCCCATCACTTTCAAGAGGGTTTGTACTCTCTTTATCATGGCTCTGTTGAATACTTGGTCT | |||||||||
gi|88203267|gb|CI203116.1|CI203116 CI203116 Oryza sativa (japonica cultivar-group) Panicles mixture of one, two, three weeks aft GCTCCGTCCCAAAATAAGTGC EST sequence (targeted fragment marked with yellow): TCAGTGAAAAGATTTTCCTTTTCCTTCATCGAAACTGATACTAGACTATATCAAAATAATCTACTTACTCCCTCCGTCCTAAAATAAGTGCAGCCATGGTTTTCCACGTCTAACTTTAACAACTCGTCTTATTTGAAAAATTTTTGAAAAAAATTTAAAACATAATTCACGAGTAAAGTAGTATTCATGTTTTATCATCTTATAACTACAAAATTGCTAATTATAAAAAAATTTCGAATAAGACGGATGATCAAAGTTGGGCGCTGAAACTCATGGCTGCACTTATTTTGGGACGGAGGTAATACAAGTTACAAGCCATGATCCGTTCATCTGAATTCTGACATGTATGTACATTCATCTGAAAAAACATGCGGAGTACGTAATGACAGTTTACCACTGGGCGAACAAAGCTACAGCTATGGCAAAAACAAACCATGTAAGTAAGATTAAATACCACATGCCACGACTCGTCATGCCGAGGCCGCCGCCGGCGCTGCGGGCGGGAGCCTCGGAGAGCCGGCGCTGCGCGGTGGCGCGAACCTGGCGGTGACC | |||||||||
gi|88731683|gb|CI755296.1|CI755296 CI755296 Oryza sativa (japonica cultivar-group) library (Kikuchi S) Oryza sativa Japonica Gro GCTCCGTCCCAAAATAAGTGC EST sequence (targeted fragment marked with yellow): ATGGTTTTCAGCGCCCAACTTTGACCATTCTTCTTATTTGAAAATTTTTTGAAAAAAATTAAAAACATAAGTCACGAGTAAAGTACTATTCATGTTTTATCATCTTATAACAACAAAATTACTAAGTATAAAAAAATTTCAAATAAGACGGACGATCAAAGTTCGGCGCGGAAACTCATGGTTGCACTTATTTTGGGACGGAGGTAGTAAGTCATAAGTACATGATTTGAGTATTAATTTACTGTAAACTTAAAAATGAGTCTATTTGATTTCCTTACAAAGATTTTTGCATAGAAAATTTTTGTATGAAACGTACTCCCCTCCGTTTTTTAATAGATGACGCCGCTGATTTTTTTCCTCACATG | |||||||||
gi|89164972|gb|CI102060.1|CI102060 CI102060 Oryza sativa (japonica cultivar-group) Panicles one day after flowering Oryza sativa GCTCCGTCCCAAAATAAGTGC EST sequence (targeted fragment marked with yellow): TTTTTTTTACAAAACAGACCATTTCTTTCCCTAACAATGCATCAAAACACTACACTGCAGCCTCCAAATTTATCCCAAAATCTCAGCTAAAGAAGCTAGTATCTACTACCTCCGTCCCAAAATAAGTGCAGCCATAGATATGCGTACTCAGCGTTTTGACCATCCGTCTGTTTGAAAAATTTATAAAAAATATTTAAAAATTAGTCACACATAAAGTACTATTCATGTTTTATCATCTAATAACAATAAAAATACTAATCATAATCTTTTTTCAAATAAGACGAACGGTCAAATGTTGGACATGAACAGTGTTAAAACTGGACTTATTTTGGGACGGAGAGAGTAGCTAGCTAAACGCCCGGCTAGGCGGCTACTCTACCAGTACTGCTACAACCACCATGTCTAGGCTGATGTGCTGCTTGCTACTGCTGCTACTCCTCCGCGTTCATCTTCGGGGTCTTCATCTCCCAGGCGTCCAGGTTGGTGACCTTGACGTCCGACTCGCCGTTGTT | |||||||||
gi|117243433|gb|CT843464.1|CT843464 CT843464 Oryza sativa (indica cultivar-group) cv. Guang Lu Ai 4 Oryza sativa Indica Group cD GCTCCGTCCCAAAATAAGTGC EST sequence (targeted fragment marked with yellow): ATCAGTATAGACAGTAGTGAGAACAGTTCAGAGAGGAAGCATGTGACACTTCCCTCTGTCCCTCTCTCTCTCTCTAGCCTCCAACCATCGCTTCACCAAGAAGCCATCACCTCCTCCTCTCTATCAAGTTCTCTCCCCTCTCTTGCTGTCTCTGCTTGCTGCTGCTGCTGCTCGATTCGGCCGGCGGCCATGGCGTCCAGCGCGTCGCGGTTCATCAAGTGCGTCACGGTCGGGGACGGCGCCGTCGGCAAGACCTGCATGCTCATCTGCTACACCAGCAACAAGTTCCCCACTGATTACGTACCCACTGTTTTTGACAATTTCAGTGCAAACGTGGTGGTCGACGGCACCACGGTGAATTTGGGTCTCTGGGATACTGCAGGGCAGGAAGATTACAATAGATTGAGGCCGCTAAGCTACCGTGGCGCCGATGTCTTTGTGCTTGCCTTCTCCCTAGTGAGCCGAGCTAGCTATGAGAATGTCATGAAGAAGTGGTTACCAGAGCTTCAGCATTATGCACCAGGGGTGCCAATTGTGTTGGTTGGGACCAAATTGGATCTTCGTGAAGATAAACACTACTTACTTGACCATCCTAGCTTGGTGCCTGTGACTACAGCACAGGGAGAGGAACTCCGCAAGCACATTGGCGCAACGTGTTACATCGAATGCAGCTCAAAGACACAGCAGAATGTAAAAGCTGTGTTTGATGCTGCCATCAAGGTAGTAATCAAGCCTCCAACAAAGCAGAGGGACAGGAAGAAGAAGAAAACACGGCGCGGATGTTCTTTCTTCTGCAAGGGTGTCATGTCCAGAAGAAGGCTAGTATGCTTCAAGTGAACAAGAGGGGTTCTTTGATGAGCAGAGCAGAGGTCTGTGAGACAAAATGATGTCTTGTGTTTGATAATTGCTTTATCTCAAAAGTTCCAGTTTGATAGTTGCATTTCCAACCTATATATATCCTGTTTGGCAATTAACTACTACCTCCGTCCCAAAATATAACAACTTTTGACTATGAATCTGAACGCACAGTTATCCAGATTCATAGCTAAAAATGCTTATATTTTGGGACGGAGAGAGTACTATAGTAGATTACTATCCTGTCCATGTAATGTATTAGGAAGGTTAATAGCACTCCCTACATCTCAGAATGGAAGATGTTTTGGTTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGGCCCTTTTGCCCCCGGGGGGGGGCCCGGCCCCCATTTCCCCCAAAAGGGGGGAAAAAAACCCCCCCCCCCGGGCCCCTTTTTTAAAACCCGGGGGGGGGAAAAACCCGGGGTTTCCCCAATTTATCCCCTTTGGAACAACCCCCCTTTTTCCCCGGGGGGAAAAAAAAAAAAAGCCCCCCCCCGTTCCCCCTCCCCAAAATTTGCCCCCCCTAAAGGGGAAAGGGGACCCCCCCTTAACGCCCCCAAAAACCGCGGGGGGGGGGGGGTTTCCCCCCACGGGGGCCCTTACTTTTGGCAGGCCCCAAAGCCCCCCTTTTTTTTTTTTTTTCCTTTTTTTTTTGCCCCGTTTTGGGGGTTTTCCCCAGAAAATTTAAAAGCGGGGCCCCCCTTTGGGGTTCCAATTTTGGGTTTTCCGGCCCCCCCCCCCCAAAAACTTTTTAAAGGGGGGGGGGTTTCCCTAAGGGGCCCCCCCCCCAAAAAAAAGGTTTTTCCCCC | |||||||||
gi|87015702|gb|CI277660.1|CI277660 CI277660 Oryza sativa (japonica cultivar-group) mixed shoot (Normalized Library) Oryza sativa GCTCCGTCCCAAAATAAGTGC EST sequence (targeted fragment marked with yellow): AGGTAGAGAACTTATGGCTGCACTTATTTTGGGACAGAGGGGAGTAGTACGATTTGGTTTGGCAGAACTTTTTGTAGTAGTACTAAAACACAGAAGTCAGAAACAGGCAACATTCTGTTTCTGTTGAACGGGTTTCGCTTGATTGGACATGATGGCAGAAAAGATGATGGAGCACTCAAGAGAGAAGCTGCATTCTGCTGCAATTGAAGAGAAGAATGGCATCATAATTACGAATAATATACTATTCTCATCGATCAGGTTTCAGTTCTGATCACAGCTTAATCAGTGACTTGCACATTATGATCAAGGGAGTATTCGCCGCTTCCCCATTTTATGTGCCCCGGCCTTTCTCCTCCGGCTAGTTCGATCTCAATCCCCTCTTTCTCCATCCAAAGATCTCTCTTCCTTCGCATCTATTTTCCTCCTCCTCCGCTCCCGCGTTCCTGGCAGCTCATCGACCTCCCGACCTTGCCGGCGGCGCGTTCTTGGTGGCGGCTATCGTTGGCCACCTTCGCCGAGTGAACCCTGAATCCGGCGCCAGCCCTGCCGGCGTCGGGGACCACATCGTCGGGCGCCGTCTCGACATACTTGGCGGCGCCCATCTCCATCTGCGCGATGCGCACGGCGCCGAAGAGCCTCTCGGGGAGCTC | |||||||||
gi|88210530|gb|CI210379.1|CI210379 CI210379 Oryza sativa (japonica cultivar-group) same as Lib 33(supermix) Oryza sativa Japonic GCTCCGTCCCAAAATAAGTGC EST sequence (targeted fragment marked with yellow): ATTTTTTTAGTTCTTTACGTGTGACTAAATATTTTTAAATTTTTCACAAAATTTTCAAATAAGACGGACGGTCAAACGTTGGACACGAATATCCACGGCTACACTTATTTTGGGACGGAGGTAGTACTACTAGTAGAGGTTAATTTGATTTTTGGTTTTCACGTACGCGTTGCAGTTGACGTTGGGGCTGATCTTGAAGGGCACCGAGACGCCGCACCTGCCGGGCAGGCCGGCGGCGCGGCTGATGTATGGCCCGCCCGCGGCGCCGGCGGCGACGTTCTTGAGGCAGGTGCAGGCGGCGCGGCGGTCGGACGTGGTGCGCGCCGCCGCCACGAAGCTCCGGATCCCCCCGCAGCACGCCGCCGGCACCGCCCCTCCCGAATGCACGTACGGCAGGCACGGAAGCAGCGTGTTGTACACC | |||||||||
gi|218495549|gb|FG956084.1|FG956084 MA_PA64s_03895 Mature embryo cDNA Library of PA64s Oryza sativa Indica Group cDNA 5', mRNA s GCTCCGTCCCAAAATAAGTGC EST sequence (targeted fragment marked with yellow): ATTAAAGTCCTTATTTTGGGACAGAGGGAGCATTTAATATCTTGACCTACTTCCCTGTCTAAACCAATCACAACCATCCCTCATTTTATTTTAGACTTCTCCTTAATACTCATGCCTAACTATAAAAGTCCTCATATTTTGGGATAGGGAGAGCATTCTCCATCTCTATTGCAGTTTGTGTTACACTATTCTGTCCATGTTTTGATGGTTTCTTGTAACGTGTCATCATACGAACAGACTAAGCTGCCTTGTATCTGTTTGGATTCTGTAATGCATGACTTGTTTTCTGATGGCATAGTGCTTGAACTTGATGTCAATAACTGATGGCATATCCTGGGTAGTCATATCCCAATACTAATCTACCAGCACATCTTTTTCATTTTTACAGGTTTGCTTGATCTCCGCAACTCTGCCACATGAGATCTTGGAAATGACCAGCAAGTTCATGACTGACCCAGTCCGGATCCTTGTAAAGCGTGATGAATTGACCCTAGAGGGCATCAAACAATTCTTTGTTGCTGTTGAGAAAGAAGAATGGAAGTTTGATACTCTTTGTGATCTTTATGATACACTGACAATCACCCAAGCTGTCATTTCTGCAACACGAAGAGAAGGTTGATTGGCTTACAAAAGAATGCG | |||||||||
gi|88237271|gb|CI237120.1|CI237120 CI237120 Oryza sativa (japonica cultivar-group) Shoot and root of germinating seeds Oryza sat GCTCCGTCCCAAAATAAGTGC EST sequence (targeted fragment marked with yellow): CAACGTTGAACGTGAATAGTATAAAACTGCACTTATTTTGGGACGGAGGGAGTATATTCCNAGATAGGAGAGGCGGGCATCGATGCTTATCGTCGCTAAATTAAATGGGAGTACAGGCTAAACACATGAGACATCCCTCGATTTAAAAACAGATTACAAACACATGGATGTTCACTTCACACACACGACAAGCAGGAGGAGGAGCAGCTGCTGAAACAAAACGACCAGCGGCGAACTTAATTTTTTTGAAAAAGGGAGAATCATAACACGGTAGAACTCATCATCATGGCCAATTGCTTCATCAACGCCTTCCAGCCATTATCCCCCAACAATGGCTGCTCGAACTCCTTTGATATCACGCGTTGCTCCTGAAGGAGCCGAGGGCTTTGATGGCGCCGGCCCGGAGGATGTACTGGTGGTAGAACGCCGCGATGGCGGCGCCGACGAACGGGCCGACCCAGAAGATCCAATGGTTGTGCCACGCCTTCTCGTTGTTGAAGATGACGGCCGCTCCGATGCTCCTGGCCGGGTTGATGCCGGTGCCGGTGATCGGGATCGTCGCCAGGTGGACCATGAACACGGCGAAGC | |||||||||
gi|88520542|gb|CI448196.1|CI448196 CI448196 Oryza sativa (japonica cultivar-group) leaf of seedling gamma-irradiated (9.5min), a GCTCCGTCCCAAAATAAGTGC EST sequence (targeted fragment marked with yellow): CTTTTTTTTATCATCCAATAACAATAAAAATATTAATCATAAAAAAATTTCAAATAAGACGAATGATCAAAAGTTGAACATGAACAGTGCAAAACTGCACTTATTTTGGGACTGAGGGAGTAGTGCTGTGGCTTGTCAGTTCCACAAAGCATACTACTCGTCCATAAAAAAAATTTGGTCATATGTACGTTTGCAGCTTGCAGGCTTCCATTCCAAAACCTCACTGTCTGCCTATATCTGCATGTTTGGGTGTATGTGATTGCTTCTTTGCAGGACAGAGACAATATGATCTTCCTCGTGTTCTATGTGTTTGTGGTGTTACTAGGAGAGTTCTGCTCCTCTTGCTCTTGTGCTCAGGTTGGTTTCAGTAGTCCACCTCCTACCATGCAAAAGCTTTCTTGCATTCATTCCGTACTAAT | |||||||||
gi|86883252|gb|CI328677.1|CI328677 CI328677 Oryza sativa (japonica cultivar-group) shoot Oryza sativa Japonica Group cDNA clone GCTCCGTCCCAAAATAAGTGC EST sequence (targeted fragment marked with yellow): GCTCAATTAAGTGTTCTTTGACAGCCTTCGTGTTTGACAGTGGAAAACATTTCCTTACCGTAGCAATAATGTTGCTTGCAGGTATAATTCCTAGGACAAAACTATATACTACTACCTCCGTCCAAAATATAAAAATTTTTAGCTATGAATCTGGACACACAGTTGTTTATATTTATAGTTAAAAATGCTTATATTTTGGGACGGAGGGAGTATATCATGACAGGAGAACGAATTCTACCCTACAACTTACTGATTTTTCCTGGTCTAATCTTCTGGGCCATCATGTCTTGAATTCCGTTCCAAAGATCATACTATGAAATAAGCGCAGCTTCTGTATGAGAGCTGAGGTGCCACTGATCAGCAGAGATTGCAGAATGATCTTCTGGGCTTATGCAACTCTTTTCATCTTTGTTGTCACCTCAGGAAAA | |||||||||
gi|89182913|gb|CI045671.1|CI045671 CI045671 Oryza sativa (japonica cultivar-group) callus Oryza sativa Japonica Group cDNA clone GCTCCGTCCCAAAATAAGTGC EST sequence (targeted fragment marked with yellow): GGAAATTTTGGGTCTATCATTTTGCTTTCTTCTGCGTATGCTCAATTAACTGCTCTTTGACAGCCTTCGGTGTTTGACAGTGGAAAACATTTCCTTACCGTAGCAATAATGTTGCTTGCAGGTATAATTCCTAGGACAAAACTATATACTACTACCTCCGTCCCAAAATATAACAATTTTTAGCTATGAATCTGGACACACAGTTGTCTATATTTATAGTTAAAAATGCTTATATTTTGGGACGGAGGGAGTATATCATGACAGGAGAACGAATTCTACCCTACAACTTACTGATTTTTCCTGGTCTAATCTTCTGGGCCATCATGTCTTGAATTCCGTTCCAAAGATCATACTATGAACTAAGTGCAGCTTCTGTATGAGAGCTGAGGTGCCACTGATCAGCAGAGATTGCAGAATGATCTTTCTGGGCTTATGCAACTCTTTTCATCTTTGTTGTCACCTCAGGAAAACCTAT | |||||||||
gi|41884325|gb|BX929156.1|BX929156 BX929156 Oryza sativa library (Han B) Oryza sativa cDNA clone y882d04p5, mRNA sequence GCTCCGTCCCAAAATAAGTGC EST sequence (targeted fragment marked with yellow): CGGCGCATCGTGTTGGTACCGGGCAATCGGCCATTATGGCCGGGATTACAAGAGAAGAAAAAAATATATATTTCCATTGATATATGCTAACTCTAAATCAAGAGTAGTACAATCATCATTAGACAATATTGCTGTTGCCCCACTACACGCTGCATGCATTGCACTATATATACCAAAGTACCAAACAAAACCAATTACCAAGAAAATCAAAATCAGAATTGAACAAGTTGTGCATACCGAATCTAGTTTAAGTTATTCAGGTTGTCAGGAACATTCAATTACACATAAAACAATTCAATTCATGTTAAAAAAAAAGCACTACTCCCTCCATCCTAAAATATGTGCTCCTTCTAACATTCAAAAGCTAAATTATGAGGTGAGAAAAATGACCCTGGATGTCACTTATTAAATCCCTAGATTATTGGAAGTGGAAGGGTCATTGGGATAAGACGGGAAGAAATTTGAATAGTGATTGATGTGATAAATAATACAAAGAGCATTCTTTCCGAACAAATTTTGAATCCGAAAGGAGCAATTATTTTGGGATGGAGAATACTTGAATTAATAGTACATTTCACTTTGAACTATCTTTAATAGCAAAGTATCTCCATGAATTACGGTTGCTATTTGTTACTGTTTGGAACTGTCTAGTTCAAAAAGTCACAGACTACAAAATAGTATCCACAAATTGCGACCACAGTGCGCGCGATCATGGACTAAAGTTGCTGCCATAATGGAGTGTCATTCATACATCCAGCATGATGCGTGTCTTAAGGAAGCGCGTGGGGGGGTACTCAAAATAGTCCATCGTCGACACAATTTCACAACAGACAGACACGGTCACACACTCGCACTCCCTCTACCTCTCTCCTCTCACGTAAAAG | |||||||||
gi|88513478|gb|CI440984.1|CI440984 CI440984 Oryza sativa (japonica cultivar-group) 14 days after transferring callus Oryza sativ GCTCCGTCCCAAAATAAGTGC EST sequence (targeted fragment marked with yellow): CTGAACGAATGTCATAATTAATTTATTTAAAAACAATAGTTTCATAACGAATGGCACCATCATATAAAGGATTTTGGGTGGACGTGACATATGCTAGTACTACCTTCATCCTAAAATAAGTGCAGCCGTGGATATCCGTGCCCAACGTTTGACCGTCCGTCTTATTTGAAAAATTTGTGAAAAATTTGAAAATATTTAGTCACACATAAAGTACTATTCATGTTTTATCATCTAATAGCAATAAAAATACTAATCATAAAAAATTTTCAAATAAGACGAATGGCCAAACGTTAAATGTGAATAGTGCAAAACTGCACTTATTTTGGGACGGAGGGAGTATAACGAATCTGGACAGACAGTATGTCCAGATTCATTGTACTTGGATATGTTACATCTATTCAAAATCCCTTTTGTTATAAGACGGAGTG | |||||||||
gi|29634528|gb|CB639537.1|CB639537 OSJNEa11A09.f OSJNEa Oryza sativa Japonica Group cDNA clone OSJNEa11A09 5', mRNA sequence GCTCCGTCCCAAAATAAGTGC EST sequence (targeted fragment marked with yellow): GCGAATTTTGAAGTCAATGATTCCCTTTTGTATACTACCTCCGTCCCACAATAAGTACAATCATGAGTTTTCGCGCCCAACTTTAATCGCCCGTCTTATTTAAAATTTTTTATAATTAGCATTTTTGTTGTTATAAGATGATAAAACATGAATAGTACTTTACTCGTGACTTATATCTTTAGTTTTTTTAAAAAAAAATTTAAATAAAACGAATGGTCAAAGTTGGGCGCGGAAAACCATGACTGCATTTATTTTGGGACGGATGGTGTAGGAAAGAGGATGCGAGAATATGGTTAACTAGTAACCGGACAAAATTGCCGAGGTTCATGTCACATCTGGTAAACAAACAAATCACCGGGGTTTTATCGTCAGTTAATTACTAGTAGTATTACTGCTTTCCTTCTTGGATTAGGAAGAAGGCCGAAAAAAACATTTGCCGTGTCCAGCTGTGTGATCTCGAAAGTTGTTGACTATTCCGAGTAGGGATTGCGTCTACAACTGAGGAACCTACGCTTTTGGCTTCTTTGGGTTCGGAGGCATGTCACGTCAACAGATACAGTT | |||||||||
gi|58681831|gb|CK070518.1|CK070518 75822rsicem_22908.y1 Oryza sativa cv. PA64s panicle ferile cDNA library Oryza sativa Indica G GCTCCGTCCCAAAATAAGTGC EST sequence (targeted fragment marked with yellow): CACAGCAGAAACACGTGGAATTCTGGACCTGAGTGTTCAGTATTGGACAAGTCGAGGATGGGCATCGTGTGGATGTTAACTATGGGGGAAGCACTGGTTTTGGGAGGGAGTATCGAGAGCAGGCTCATTGGGGCAACATGGGGTCATCGTCGCATGTTGCATGCATTGTTGCCAGCTGTGCCAAGCA | |||||||||
gi|88487341|gb|CI424612.1|CI424612 CI424612 Oryza sativa (japonica cultivar-group) 4th leaf leaf 1mM ACC(1-aminocyclopropane-1-c GCTCCGTCCCAAAATAAGTGC EST sequence (targeted fragment marked with yellow): CTTTTTTTTTTTGACAGTGGAAAACATTTCCTTACCGTAGCAATAATGTTGCTTGCAGGTATAATTCCTAGGACAAAACTATATACTACTACCTCCGTCCCAAAATATAACAATTTNTAGCTATGAATCTGGACACACAGTCGTCTATATTTATAGTTAAAAATGCTTATATTTTGGGACGGAGGGAGTATATTATGACAGGAGAACGAATTCTACCCTACAACTTACTGATTTTCCCTGGTCTAATCTTCTGGGCCATCATGTCTTGAATTACGTTCCAAAGATCATACTATGAACTACGTGCACCTTCTGTATGACAGCTGAGGTGCCACTGATCAGCAGAGATTGCAGAATGATCTTTCTGGGCTTATGCAACTCCTTTCATCTTCGTGGTCACCTCAGGAAAACCTATAATTCATACTACTTCTTATG | |||||||||
gi|88850855|gb|CI096245.1|CI096245 CI096245 Oryza sativa (japonica cultivar-group) Panicles more than 5cm stage Oryza sativa Jap GCTCCGTCCCAAAATAAGTGC EST sequence (targeted fragment marked with yellow): ATTTTTTTTTTTCTTATATCCACGACTGCACTTATTTTGGAACGGAGGTAGCACACATATAGCACACATATAGGTACACTCGTATGGCGCAGTAAGCATCATTAGCTACTACTGCACCTGCCGACCGCCCAGCCGGTAAAAACCATGCTACAAAAGGGGCGGCAGCGTCGACAGGAGCAGCACATAATCACATATGCATGCGGCAAGCTATTTTACACAACATGCACAACGCTGCACTGAACTGCACTCCACTGCTCTGCTGCAGAAAACCCCAGGACAGAGGAGTACTGCTGCACTACTGCACAGCAGAGGCATGCAGGAGGAGGCAGCTCGCCAGTGCCAGTTTTGGGCTGGCCAAGCAAGCCAAGGCAACGGCGGCCTTTAGTTACCAGAAATGGGTTAAAAGTAACACAACACAAGGATAGATCGATCGATCGATCGATCTCGATCATATTCACAGCTACCAGTACCACGGAGCTAACTACACTAGTACAGTAACACTTCACAGTTG | |||||||||
gi|88984653|gb|CI009428.1|CI009428 CI009428 Oryza sativa (japonica cultivar-group) etiolated shoot Oryza sativa Japonica Group c GCTCCGTCCCAAAATAAGTGC EST sequence (targeted fragment marked with yellow): ATAAAACTGCACTTATTTGGGACGGAGGGAGTATATTCCAGATAGGAGAGGCGGGCATCGATGCTTATCGTCGCTAAATTAAATGGGAGTACAGGCTAAACACATGAGACATCCCTCGATTTAAAAACAGATTACAAACACATGGATGTTCACTTCACACACACGACAAGCAGGAGGAGGAGCAGCTGCTGAAACAAAACGACCAGCGGCGAACTTAATTTTTTTGAAAAAGGGAGAATCATAACACGGTAGAACTCATCATCATGGCCAATTGCTTCATCAACGCCTTCCAGCCATTATCCCCCAACAATGGCTGCTCGAACTCCTTTGATATCACGCGTTGCTCCTGAAGGAGCCGAGGGCTTTGATGGCGCCGGCCCGGAGGATGTACTGGTGGTAGAACGCCGCGATGGCGGCGCCGACGAACGGGCCGACCCAGAAGATCCAATGGTTGTGCCACGCCTTCTCGTTGTTGAAGATGACGGCCGCTCCGATGCTCCTGGCCGGGTTGATGCCG | |||||||||
gi|87021958|gb|CI278125.1|CI278125 CI278125 Oryza sativa (japonica cultivar-group) mixed shoot (Normalized Library) Oryza sativa GCTCCGTCCCAAAATAAGTGC EST sequence (targeted fragment marked with yellow): TTTTTTTTTTTTTTTTTTTCCCAAGNTGACAATTTGGCATATATATTCAGCTAGCTGAGCATAGCATTGCAAATCACAAAGAGAAACACACAACCGGCTAGAATAGTGTCACCGAAAGCACTAGAAACATGGTAGTACTACTAAGTTGCTAACATATAGGCAACCATTCTACCCCCCAGACAGACATTATATTATTTCTACCACTCAAGCACCATGATTCCATCAAGCTAGCTAGCGATGGTTACTACTACTACCTCCTCCGTCCCAAAATAAGTGTAACCATAGATATTCGTGTCCAGTATTTTAACCATTCGTATTTGAAAATTTTATGAAAAAAATTAAAAATATTAGTCACACATAAATACTATTCATGTATTATCATATAACAACAATAAAAATACTAATTATAATTGTTTTTCAAATAAGACGAACGATCAAACGTTGAACATGAACAGTGCTAAAACTGCACTTATTTTGGGACGGAGGGAGCACAAATTAAAGTGACTGACACGATCATTCTAGTGCTGCTCCGAAGGCGAAGGCTAACAGCTTGCAAGTCCCATCACAGGTGTTTGACGTCCGAGGCGCCGGCGAAGAAGTCATGTCGAAACGCAGGACGCAGTCGTCGCTCACCACGATGCCGACGCCCTCTCC | |||||||||
gi|58595413|gb|CK005941.1|CK005941 32574rsicef_4159.y1 Oryza sativa cv. PA64s panicle sterile cDNA library Oryza sativa Indica G GCTCCGTCCCAAAATAAGTGC EST sequence (targeted fragment marked with yellow): CCGGGCTGCAGGAATTCGGCACGAGGGTAAGTATTCTCTCTGTCCCAAATATATAGGCTTATATATAGCAAGATATCTACTTATTTTGAGACGGAGGTAATACTTTTATATAATACATCAACAATTGTTTTCTTTTCATTAATATTTACTTATCATTCTTATGAAAATTTCTTATTTTCACTCATCGAGAGTATGAACTTACACATGCATAGCCTAACTCATAGAATATGTAGTCATACTTCAAGCACATTTTAGTGGAGTTTTCTTACCTGTTTAGTTTCATTCATTTTCTTACCATGCTGTTATGTTTAGCTTTTAATTTGTATGAGTTTACAAGATCACTATATATTTTATGCTTATAATATGTTAGTTTAATTTGAACCAATTAATGAAGAAAACAAATTGAATTTAATAAAAGAACTCTACTGTTTTACCTTGGATATAATTCCAACTGTATTGGAATTTGGTCCCTCAACTATGAAAGTGATCACTATTGGT | |||||||||
gi|86491658|gb|CI134291.1|CI134291 CI134291 Oryza sativa (japonica cultivar-group) Panicles less than 5cm stage and Panicles two GCTCCGTCCCAAAATAAGTGC EST sequence (targeted fragment marked with yellow): AAACGTTGAACGTGAATAGTATAAAACTGCACTTATTTTGGGACGGAGGGAGTATATTCCAGAATAGGAGAGGCGGGCATCGATGCTTATCGTCGCTAAATTAAATGGGAGTACAGGCTAAACACATGAGACATCCCTCGATTTAAAAACAGATTACAACACATGGATGTTCACTTCACACACACGACAAGCAGGAGGAGGAGCAGCTGCTGAAACAAAACGACCAGCGGCGAACTTAATATTTTTTGAAAACAGGGACGAATCCATAACACGNGTAGAACTCATCATCATGGCCAATTGCTTCATCANACGCCTTCCANGCCATTATCCCCCAACAATGGCTGCTCGAACTCCTTTGATATCACGCGTTGCTCCTGAAGGAGCCGAGGGCTTTGATGGCGCCGGCCCGG | |||||||||
gi|86536328|gb|CI176534.1|CI176534 CI176534 Oryza sativa (japonica cultivar-group) supermix Oryza sativa Japonica Group cDNA clo GCTCCGTCCCAAAATAAGTGC EST sequence (targeted fragment marked with yellow): CACTTATTTTGGGACGGAGGGAGTATATTCCAGATAGGAGAGGCGGGCATCGATGCTTATCGTCGCTAAATTAAATGGGAGTACAGGCTAAACACATGAGACATCCCTCGATTTAAAAACAGATTACAAACACATGGATGTTCACTTCACACACACGACAAGCAGGAGGAGGAGCAGCTGCTGAAACAAAACGACCAGCGGCGAACTTAATTTTTTTGAAAAAGGGAGAATCATAACACGGTAGAACTCATCATCATGGCCAATTGCTTCATCAACGCCTTCCAGCCATTATCCCCCAACAATGGCTGCTCGAACTCCTTTGATATCACGCGTTGCTCCTGAAGGAGCCGAGGGCTTTGATGGCGCCGGCCCGGAGGATGTACTGGTGGTAGAACGCCGCGATGGCGGCGCCGACGAACGGGCCGACCCAGAAGATCCAATGGTTGTGCC | |||||||||
gi|218783498|gb|GE329550.1|GE329550 RGGMB241 Drought-stressed leaves at the stage of tillering by cDNA-AFLP analysis Oryza sativ GCTCCGTCCCAAAATAAGTGC EST sequence (targeted fragment marked with yellow): CACATAAAGTACTATTCATATTTTATTATCTAATAACAATAAAAATACTAATCATAATCTTTTTTCAAATAAGACGAACGGTCAAACGTTGAACGTGAATAGTGTTAAAACCGCACTTATTTTGGAACGGAGGGTGTAGA | |||||||||
gi|88908453|gb|CI091046.1|CI091046 CI091046 Oryza sativa (japonica cultivar-group) Cd treated callus Oryza sativa Japonica Group GCTCCGTCCCAAAATAAGTGC EST sequence (targeted fragment marked with yellow): TTTCAGCCCACAAAAGAGTGTTTTTACCATCTTGATACCTCCAGCTGATCTGAGACATCCATTATGCCTTATCTAACGGTTGATAGAATGCGGTACGGTGGTAGTAGAAGGTACTCCCTCCGTCCCAAAAAAACAAACCCTGGTTTCCGTGCCCAACGTTTGACCGTCCGTCTTATTTAAAAAAATTATGAAAAAAATTAAAAAGACAAGTCACACATAAAATATTAATCATGTTTTATCATCTAACAATAACGAAAATACGAATTATAAAAAAAATTCATATAAGACGGACAGTCAAAGTTGGACACGGAAACCCAGGGTTTGCCTTTTTTTTGGGACGGAGGGAGTACTCGGCTGGTCAGTGCAGGCGCTGCAGCAGCCGCCCGCTAGCGGCTGCTGATGTTGCAGCTGCAGACATAACATACTGTTTGGGTTGGCTGTACAACAGTTAAATTAAGTGCAGCCGAACGGAGCCAATTTCGGCTTCAGTTCTTTCCTGATGGAC | |||||||||
gi|29683669|gb|CB679944.1|CB679944 OSJNEf04B14.f OSJNEf Oryza sativa Japonica Group cDNA clone OSJNEf04B14 5', mRNA sequence GCTCCGTCCCAAAATAAGTGC EST sequence (targeted fragment marked with yellow): CTCATAACAACAAAACCTTTAATTATAAAAAAATTTTAAATAAGACGAACGATCAAAATTGGGCGCGGATACTTATGGTTGTACTTATAATGGGACGGAGAGAGTATTCAAGTATGCAGAAAACATCGCAGGATTACAATGTTGTTTCCGTATGAGTCCTATCTGTTGATCAACAAGACAGAATGCTATAATCTGCAACCTCCTGTAAATCAAGCCGTACGTTCTCTGTGTAATCGGTTGACTGGTTGGCATTAACAAGCTGCTGCTTGCCAGAAAAGAAAAACATGACTTTTCTG | |||||||||
gi|89178554|gb|CI015259.1|CI015259 CI015259 Oryza sativa (japonica cultivar-group) etiolated shoot Oryza sativa Japonica Group c GCTCCGTCCCAAAATAAGTGC EST sequence (targeted fragment marked with yellow): CTTTTTAACGTGAACGTGAATAGTATAAAACTGCACTTATTTGGGACGGAGGGAGTATATTCCAGATAGGAGAGGCGGGCATCGATGCTTATCGTCGCTAAATTAAATGGGAGTACAGGCTAAACACATGAGACATCCCTCGATTTAAAAACAGATTACAAACACATGGATGTTCACTTCACACACGACAAGCAGGAGGAGGAGCAGCTGCTGAAACAAAACGACCAGCGGCGAACTTAATTTTTTGAAAAAGGGAGAATCATAACACGGTAGAACTCATCATCATGGCCAATTGCTTCATCAACGCCTTCCAGCCATTATCCCCCAACAATGGCTGCTCGAACTCCTTTGATATCACGCGTTGCTCCTGAAGGAGCCGAGGGCTTTGATGGCGCCGGCCCGGAGGATGTACTGGTGGTAGAACGCCGCGATGGCGGCGCCGACGAACGGG | |||||||||
gi|66925931|gb|CX112779.1|CX112779 EI077N06 A normalized whole-life-cycle cDNA library of rice Oryza sativa Indica Group cDNA cl GCTCCGTCCCAAAATAAGTGC EST sequence (targeted fragment marked with yellow): CAGGCGGGAATCCTGGGCGACCACGCGTCCGGCGGATCAACCCGGTGGCGCCGCCGACCTCCGGCGAGCCGCCGGCGATGGCACCGCCGACAACCGCGCCACCGTGGTGACCTTACCGCCGCCGGATTCAGTGGCTACCCCGGTAGCACCTACACGAAGTGGAAAGCTTTGGCATCATCTCAACTAAGGGGCGAGCTGGAGAAGGCACACGGATTACTGCTTGCCAATATCCGAGCGGCAGGAGACTCAAGCGCCTAATGTCACCGTAATGGTGACCCCCCTCAGTAGTGTTCTTCTCTTTTGGACTCCCAGCGCCTTTTTGTTCTATCCCTGGCTTGTTATGGCTGTGCCAGCAGTATTTCTGTCCTACTTAAACTCCTGTGCATCTTGAGCTGGCAGTCCCAGCGGTTGTAAGACTCTGTTATGCTTTGCTATAAAAGCTGGGCTTTGGCCTTTGTAAAAAAAATGAACTTATTTTGGGACAGAGGATATACCATTATAGAATTTGG | |||||||||
gi|86251614|gb|CI016903.1|CI016903 CI016903 Oryza sativa (japonica cultivar-group) green shoot Oryza sativa Japonica Group cDNA GCTCCGTCCCAAAATAAGTGC EST sequence (targeted fragment marked with yellow): TTTGAACGTGATAGTATAAAACTGCACTTATTTGGGACGGAGGGAGTATATTCCAGATAGGAGAGGCGGGCATCGATGCTTATCGTCGCTAAATTAAATGGGAGTACAGGCTAAACACATGAGACATCCCTCGATTTAAAAACAGATTACAAACACATGGATGTTCACTTCACACACACGACAAGCAGGAGGAGGAGCAGCTGCTGAAACAAAACGACCAGCGGCGAACTTAATTTTTTTGAAAAAGGGAGAATCATAACACGGTAGAACTCATCATCATGGCCAATTGCTTCATCAACGCCTTCCAGCCATTATCCCCCAACAATGGCTGCTCGAACTCCTTTGATATCACGCGTTGCTCCTGAAGGAGCCGAGGGCTTTGATGGCGCCGGCCCGGAGGATGTACTGGTGGTAGAACGCCGCGATGGCGGCGCCGACGAACGGGCCGACCCAGAAGATCCAATGGTTGTGCCACGCCTTCTCGTTGTTGAAGATGACGGCCGCTCCGATGCTCCTGGCCGGGTTGATGCCGGTGCCGGTGATCGGGATCGT | |||||||||
gi|88840955|gb|CI000917.1|CI000917 CI000917 Oryza sativa (japonica cultivar-group) etiolated shoot Oryza sativa Japonica Group c GCTCCGTCCCAAAATAAGTGC EST sequence (targeted fragment marked with yellow): TTGAACGTGAATAGTATAAAACTGCACTTATTTTGGGACGGAGGGAGTATATTCCAGATAGGAGAGGCGGGCATCGATGCTTATCGTCGCTAAATTAAATGGGAGTACAGGCTAAACACATGAGACATCCCTCGATTTAAAAACAGATTACAAACACATGGATGTTCACTTCACACACACGACAAGCAGGAGGAGGAGCAGCTGCTGAAACAAAACGACCAGCGGCGAACTTAATTTTTTTGAAAAAGGGAGAATCATAACACGGTAGAACTCATCATCATGGCCAATTGCTTCATCAACGCCTTCCAGCCATTATCCCCCAACAATGGCTGCTCGAACTCCTTTGATATCACGCGTTGCTCCTGAAGGAGCCGAGGGCTTTGATGGCGCCGGCCCGCGAGGATGCCCTGGTGGTAGAACGCCGCGATGGCGGCGCCCCCGGACGGGCCGACCCAGAAGATCCAATGGTTGTGCCACGCCTTCTCGTTGTTGAAGATGACGGCCGCTCCGATGCTCCTGGCCGGGTTG | |||||||||
gi|86883033|gb|CI314263.1|CI314263 CI314263 Oryza sativa (japonica cultivar-group) shoot Oryza sativa Japonica Group cDNA clone GCTCCGTCCCAAAATAAGTGC EST sequence (targeted fragment marked with yellow): AGAGTCTGAAAATGCTTATATTTTGGGACGGAGAGAGTAAGTTACCAGAGTATTTGAGTAAAGCATGGGCGGCGAGAAATCTCATTGCCGACCCAAGTACCCAACTGCGAGTCGAATTCAATTGAAATTTCTCAAGTTCAAAGGAAATCAAGGTCTACCAAGTCCAATGGAACTGCAAAAAGATGTTCCCAATAAATAATTGGCCACTTACTCACTTGCCACAGCGCGTGTCAATCCGACTTGCACCCGTTGTCCGTTGCACGTGCAAGCAGCTATAGTCATCTGGAAATGGAGTCGCCGCCGGCGCACGAGCAGTTGACGAGAGGCCGGCCATGGCCGATCGGCATCGTCGTCAACAGCGGGTTCCTCTCGAAGAAGTTGGACGGCCGGAGCTCGAGCCCGCCGCTCAGCGTCGGCATCACGGGAAGTCTCCTGGTAGGCACGTGGTGCACCCCACCGTGTACACAGCACG | |||||||||
gi|29631999|gb|CB637008.1|CB637008 OSJNEa03B15.f OSJNEa Oryza sativa Japonica Group cDNA clone OSJNEa03B15 5', mRNA sequence GCTCCGTCCCAAAATAAGTGC EST sequence (targeted fragment marked with yellow): TACGAGAAATGTATTTGTAGAGGCATATGGAGCAAATAACATGAGCAAGTTAGTTAGGTAGATGAAAAGAATGCGGCACCCGTTTCCTACATTTTAGAACAGCAATTTTGTGACAAGGTAGTTATTTTCACCCAACATACAAGTGCATTATATGCGAGACATACTGTGTTCTTTCCGGGGAAAAAAATATTGTGGCGCATTTTTTATAATTTAAATAAATCCAGGCTATATATATGTATCTGGCTAGGCTCGCTATCTACTACTCCCTCCGTCCCAAAATAAGTACAGTTTTAGCACTGTTCATGTCCAATGTTTGACCGTTCGTCTTATTTGAAATTTTTTTATGATTACTACTTTTATTATTATTAGATGATAAAACATGAATAGTACTTTATGTGTGACTAATTTTTTTAATATTTTTCATAAATTTTTCAAATAAGACGAATGATCAAAATGATGAACACGGATATATATGGCTGCACTTATTTTGGGACGGAGGTAGTATTATTATCTTTTAAAAAAAAACTAGTACTACTACATTATTAAGAGCACCAACAAGCCATCATGACATCAATGGTAGGGGTCTATCCTCCAAAATATATAGTTATGC | |||||||||
gi|88719133|gb|CI742643.1|CI742643 CI742643 Oryza sativa (japonica cultivar-group) 5 days after pollination pistil Oryza sativa GCTCCGTCCCAAAATAAGTGC EST sequence (targeted fragment marked with yellow): TTCCACTCCACTCCACCAGACCGGCCACCACTTGCCCACTCCCTCGCTACTACTAGTACTAGTCCTACACTATACGCTCCCGGATGGCGGACGCCGCTGGCATCGCCACCGTCCTCGCCGCCGACGGCAGGGACTTCCTCCTCCGCAACTCCGCCGACCAGACAGACGGTCAAATGTTGGACACGGATTTCCACGGCTGCACTTATTTTGGGACGGAGGTGAAGATCAGCAGCATCGAGGCAAGCACCGTTGCCCTCTACTTCTCGGCCTCATGGTGCCCACCATGCAGGCGCTTCACGCCTAAGCTTATTGAAGCATACAATGAGCTGGTCTCCCAGGGAAAGAACTTCGAGGTTGTCTTTGTTTCAGGGGA | |||||||||
gi|86889787|gb|CI333438.1|CI333438 CI333438 Oryza sativa (japonica cultivar-group) shoot Oryza sativa Japonica Group cDNA clone GCTCCGTCCCAAAATAAGTGC EST sequence (targeted fragment marked with yellow): GTCTCCAATTTTCTAGAAATGCAATTATTATGGGACGGAGGTAGTAATTGTTAGTACAAGGAATTATATTACAAGTTGCATTTTAAAGACAAACACGTTTAGTTTTACCAGTAGAAGATGCATAAAGTATCTGCTTGCATGATGAACTTAATGTTTCCATACTTGGGTAACCCATCTCCCCGTGTTACCATCCATCTTTCTGCAACCCTCCATTCATAGCACATCGCATTTCCGTCGGAACATGAAACCACCATTCTTTTATTCCATTACACCTTGTTGCTACAAGATAAGTGAATTAACTGTACAGAAAAACTAATGTACAGGCACCGTAGGGGAAGAAATATTTATCAGCTGCTTGACGTGATGTATCTACACAGATTTCACTGGTCCCGATCACGATCACGATAAATTGGCTGCGGCGTCCACTTGAAGTGCAAGTTCAGCTTTCCGGATTTAGCACCTTGCAAAACAAACTCA | |||||||||
gi|29628277|gb|CB633288.1|CB633288 OSIIEb12A20.f OSIIEb Oryza sativa Indica Group cDNA clone OSIIEb12A20 5', mRNA sequence GCTCCGTCCCAAAATAAGTGC EST sequence (targeted fragment marked with yellow): GGCCGGTCTGGTCCTTGTGCACGTGACATCTACTACATCCGTCTCAAAATAAGTGCGGCCATAAGTTTCCACGCTCAACTTTGATCGTCCGTTCTACTTGATTTTTTTTATAATTAGTATTTTTATTGTTATGAAATGATAAAACGTGAATAGTACTTTGCTCGTGACTTATGTTTTTAATTTTTTTAAAAAAAATTAAATAAGATGAACAATCAAAGTTGGACATGGAAAATCATGGCTGCACTTATTTTGGGACAGAGGGAGTATTTGTTAATATATGAAATGATTAATTTTAATTTTGAATCCCACTATAGGGCTATGTAGTGTTAGTAGAAAATAATATAAATAATCGAAGTGATCATATATCTATTTATACTACAACCTCATTACATGGTAGTAGAAACGTGGAGCAATATTATTATAAGAAAAATGTGTGGAGAGACAATCATTATTTAGTAGTGACTTTTTTTTTTGCTTTTCGATGGAATATGAGCGATGTCATTGCCAGCGCAATGAATGACCTCGGATTGATCTAGCCATGATAAACATAAAAGATAAATTTGTCCCTCGTCATTGTATAAATAAATTGGATTGATCTAGCCATGAAAAACATAAAAGATAAATTTGTCCCTCGTCATTGTATAAATAAATTACTAACTTATTCTTAATAATGAACGGTTAATATTATTTTTATTGTAGTATAATACTACTTAGTANAGAGAGCATTGGAATCGTTCATTAGTTTTATTAGTGGTCTTTTTTAAAAAAAAATAAAACATAGATAGAAACTCACATGACCGCGACAACTAGAAGCTAGGTACTATGGGTATCGAGCGATCTCTCTCATCTC | |||||||||
gi|88244688|gb|CI243810.1|CI243810 CI243810 Oryza sativa (japonica cultivar-group) Shoot and root of germinating seeds Oryza sat GCTCCGTCCCAAAATAAGTGC EST sequence (targeted fragment marked with yellow): TTAGCTAGCAACTCAATGTTTCTCATTGTAATCAGTAATCGGTCAAATCCAGTACCAATCCAGTTAGGCAGGGGCGGGCATGCGAGTAAACAAATACTTCCTCCGTTCCAAAATAAATGCAGCCATAAGTTTCCGCGCCCAACTTTGATCGTCTGTCTTATTTGAAATTTTTTATAATTAGCATTTTTCTTGATATAAGATGATAAAACATGAATAGTACTTTACTCGTGACTTATGTTTTTATTTTTTTAAAAAAAAAATTAAATAAGACGAATGGTCAAAATTAGACACGGAAAACTATGGCTGCACTTATTTTGGGACGGAGCGAACAGTAGGAGTAGTACAGCTAGCGAAGCTAACCCCGGAAACGATGCCAGTTAGGAGTAATAATTTGGTGTGCCAAACTTGACATGGATGGAAATGTAGACAAGACTTTCTGGGAATCGTTAGCGCACGAGGAGGAAGGACACAACTAGCAAGGCAGCGAATTGAACACAGAATTGTAGGCATGCGTTCGTGCA | |||||||||