| mature miRNA: GCTGGGACGGAGGGAGTACAT species: Pseudoroegneria spicata database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|207425578|gb|FF363119.1|FF363119 BG02037B2F10.r2 BG02 - primary and normalized libraries Pseudoroegneria spicata cDNA clone B GCTGGGACGGAGGGAGTACAT EST sequence (targeted fragment marked with yellow): ACCGATTTTTNNNTTTTTTTTTTGCCCAACATCATTTTGTTTACTCCCTCCGTCCCAAATTATTTATCTTAGATTTGTGTAGATACGATTGTGTCTAGCTAAATCTAGTAATTTGTGACACAGGTAATACATGACTCAAGACACGATGGTCTAAGTGCAGCATCAGATCACAAGTTCATCAAAAAGAGCTCAGCGCAAATTGACCTAGTAGCTCAGACTCCAAAAAGAACCATCGGATCACAAGATCCTCGAAAAGAGCTCGAGCCTGGTAGCTCAGACTCCAGAACTCAAACTCCATACGACAAAGTTTTGGGAACTGAGAAAAATCTTAAACCAAAAGAAAAACTGGAGGGGACAAGCCGTAGGAAGCATCAGCTGTCAGGTATGCCCACCTACCTTGAAAAGAGGGCAGCTCTCAGTTTTAGCTTTAACCTTAGGAACCATAGAAGCTCCCAGGGGAAGAGTAACGTCGGACAGGACTCCAAGGGCTCCTCCCACATGAAACGTATTCCTCGGCATCACGAAAAGTTTACTGTAGCTGCGCCATGTCATGCCCCATTGGCTGTCGAATGAATTCATACCGATCCAGTATTCGCCCTGTAGTGGGCACTCACCATATCCAAGTAGAAGAACAGAGTGATCAGGTTTACCATGTTTGTCAGGAACTACAAGGAAATCCTGTTTGTAATTCATAAATTCGCCGTCAGTGTAGATTGAAGAAACCACAGGCTGATGAGCAACTGCATACTTCACAGCTTCTTCTGTCGGTTCTACAG | |||||||||