| mature miRNA: GCTGGGTGATATTGACAGAAG species: Arachis hypogaea database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|224927794|gb|GO258166.1|GO258166 VBL1_13_N05_E001.g1 Normalized cDNA library from cotyledon and young leaves of peanut Arachi GCTGGGTGATATTGACAGAAG EST sequence (targeted fragment marked with yellow): GGGTTTAATGATATGGTGGCATCCCGAAGCTCTGGGGTTTCCCAAACTGGCGAAGCTTCAAATGGGCAGAACGATGAGAAGATGGGATCCTGTTCGGGGGGCCACTCAGAAGTGGAGAAGAACACTTCTGTCAATATCACCCAGCAGGCAGAAAATTCAACCAAGGTTCAGGAAGAAGCTGACACAAAAAGAGATGAAGCAACTGAGAAGCTAACATCTGGGGACCTGAAGAATGGCAGCCCCAAAGAAAATACTCAGGTCCCCCTCAGAGCATCCACCTTCCCAACCCAGGAATCCGTCCTCAGCTCAGAAAATGAAAAGAGCATGCCTTGCTGCCCAGACAACGGAGCTGAAATGTCTCAAAGGTCTCACTCTCAAAGGATTGTGGCTCCAGCACAGGCAACTGCTGGTGCCCACAAAAGTGAAGCAAGCAATGAGGCCCGAGAGACAAGTTCAGCAAAAAAAGACAGCAAGGGCAAAGGAAAAGAGCAAAAGGACGAAATCAACTGGGATAGCTTGCGAACAGCCGCGCAAGCTATAGCAGGGAAGAGAGAGAAGACATGGAACACCATGGATTCTCTCGACTGGGATGCTGTGAGATGTGCAGATGTTAGCACAATCTCAGGTGTGATCAAAGAAAGGGGCATGAACAACAGGCTCGCTG | |||||||||
gi|225598945|gb|GO327609.1|GO327609 VBL6_23_E02_E001.g1 Normalized cDNA library from developing embryos of peanut Arachis hypoga GCTGGGTGATATTGACAGAAG EST sequence (targeted fragment marked with yellow): TTTTTTTTTTTTTTTTTTTTTTTTTTTTTACATTCAAACAACAATTAACATTAAAACCAAATTACATAACAAAAACAAGAACTTAAAGTTTACAAGAGCTTAGCATTAGTACACTAATTGCACTCATAACACTATTTATACGACTCAAAATCAACAACAGGAGACAGACGCTTCTCTCGCTGGAAAGGATCAGTGGGGGATTCGGGGGGGGGGGTCTTCCTCACCCAAAATGTCTCAAACCATCTCTCAAGGGATGTATTCTGCAGTATCATTTGAAAGCAAGCTTTACCAGATGCCATAGTAACATTGTTTGTTCTCTTTCCTTTAACAGTTCTGCATTCATGGGCCTGGCGGCTCGATTCCCCAACAAATCACAAGTAAATGTTGGGGCGCCCGTAGAGATCTCAGAGGGGGATGCGCCGTTGAATCCATCCGTTCATGACGCCCCTGAGCATTCTGGACACAAGATAACACAGTGGAGTGTCCCAGAAATGACTCAAAGAACGGGGTTTAATGATATGGTGGCATCCCGAAGCTCTGGGGTTTCCCAAACTGGCGAAGCTTCAAATGGGCAGAACGATGAGAAGATGGGATCCTGTTCGGGGGGCCACTCAGAAGTGGAGAAGAACACTTCTGTCAATATCACCCAGCAGGCAGAAAATTCAACCAAGGGTCAGGAAGAAGCTGACACAAAAAGAGATGAAGCAACTGAGAAGCTAACATCTGGGGACCTGA | |||||||||
gi|149219459|gb|ES708908.1|ES708908 C20R7_26_C05_E002.g1 USDA-Tifton Peanut Library C20R7 Arachis hypogaea cDNA clone C20R7-026- GCTGGGTGATATTGACAGAAG EST sequence (targeted fragment marked with yellow): TTTTTTTTTTTTTTTTTTTAGGGAAAATATTAAATTCAAACAACAATTAACATTAAAACCAAATTACATAACAAAAACAAGAACTTAAAGTTTACAAGAGCTTAGCATTAGTACACTAATTGCACTCATAACACTATTTATACGACTCATAATCAACAACAGGAGACAGACGCTTCTCTCGCTGGAAAGGATCAGTGGTGGATTCGGTGGTGGGGGTCTTCCTCACCCAAAATGTCTCAGACCATCTCTCAAGGTATGTATTCTGCAGTATCATTTGAAAGCAAGCTTTACCAGATGCCATAGTAACATTGTTTGTTCTTTTTCCTTTAACAGTTCTGCATTCATGGCCCTGGCGGCTCGATTCCCCAACAAATCACAAGTAAATGTTGGGGCGCCAGTAGAGATCTCAGAGGGGGATGCGCCGTTGAATCCATCCGTTCATGACGCCACTGAGCATTCTGGACACAAGATAACACAGTGGAGTGTCCCAGAAATGACTCAGAGAACGGGGTTTAATGATATGGTGGCATCCCGAAGCTCTGGGGTTTCCCAAACTGGCGAAGCTTCAAATGGGCAGAACGATGAGAAGATGGGATCCTGTTCGGGGGGCCACTCAGAAGTGGAGAAGAACACTTCTGTCAATATCACCCAGCAGGCAGAAAATTCAAC | |||||||||
gi|300517316|gb|HO115568.1|HO115568 P4428 Peanut (Luhua14) seeds full length cDNA Library Arachis hypogaea cDNA 5', mRNA sequenc GCTGGGTGATATTGACAGAAG EST sequence (targeted fragment marked with yellow): TGCTTGAAGGCCTGATCTCCTCTGCGATGAACAATTACCAGAACACAGCGTTCGTGAAGGCGTTCGTGGCGAAGATCCTAAGAGATTTCTCGTCTAAGGAATCGGCGAAGAGAGTTTTGGAGAAGGCGTTCAAAACGAGCTTGTTGACGGTGAAGGAATCGTTGGAGGATTATTCGAGTCCCGTGTTCAGAGGGGACCATAACGAAACTGAGGCTCTTCAGAGGTTGAATCTGCATAAGGCTTCGACCAATGGGAAACATTTGCTGTGGCTTGTGGAGAGGATGATTGAGCTGAGGGTGGCTGATGCTGCTGTTAGGGAGTGGAGCGAGCAGGCCGCTTTCACCGCCGATCTTCAGAGGGCGTTCCGCGATGATGCGTGGAGGAACATTGTGCCTGGCCTCCCTGCTGTTGTCCTTAGGTGTACTTGCAAGCTCGCTAATGCTGTTAGTGCTGGCACTATTCTGGCATCGAAGCAGGTTAGAAGGAAACTAGTAGAAGATTGGCTTCCCGTTTTGGTGGTTTGCAAAGATAATGTTTCGCCAATATCACCCAGCAATAAATCGCTATATCTGGAGCTGGAAGAAACATTTCTGCGGATCATATCCACACTGCCTATGTCTGATGCTCAGGAACTGTTGCAGCGGTGCCTAAGCTTTTCAACCCGAAACGTTGA | |||||||||