| mature miRNA: GGAATGAGCAGGGACATGGTG species: Populus trichocarpa database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|52401833|gb|CV239301.1|CV239301 WS0231.B21_P20 PT-MB-A-13 Populus trichocarpa cDNA clone WS0231_P20 3', mRNA sequence GGAATGAGCAGGGACATGGTG EST sequence (targeted fragment marked with yellow): AGAAAACATCGGGTTGCTTGGAAGCACTCGTGTCGGAAGCCGCAGGGTTATTCAAATCTCAGCTGGTTTTATGATATTCTTCTCTATTTTAGGAAAATTTGGAGCTTTATTTGCATCAATACCCTTCCCTATTTTTGGTGCTGTCTATTGCGTGTTGTTTGGTCTAGTTGCTTCCGTGGGGTTGTCATTTTTGCAATTCACAAACATGAACTCAATGAGAAACCTTTTCATTACTGGCGTTGCCTTCTTTCTTGGTTTGTCCGTCCCTGAGTACTTTAGAGAATACACTTCCAAGGCCTATCATGGTCCTGCTCATACCAGAGCTGGATGGTTCAACGATTTCCTCAACACTATCTTCTTCTCATCCCCAACTGTTGCATTGATAGTCGCTGTTTTCTTAGACAACACACTTGACTACAAGGACAGTGCTAGGGATAGAGGAATGCCATGGTGGGTCAAGTTTCGGACATTCAAAGGAGACAGCAGGAATGAAGAGTTCTACACCCTTCCTTTCAACCTTAATCGTTTCTTCCCTCCATCTTGAACTAACTTCAATTCCAACGAAAGATGATAGAGGAAAAACATCATTTCCAGATCAGGAATATATGTGGGGTATTACAACTATAGTTAAGAAGAGTGAAACAAAAGATCCATGTGTTTTGCTTGCAGAGAATGACTCCTTCCTGCTTTCTCCTCTCTCATTTTCATTGATTTTGTTATGTATATGACTTGGGTTGGTCAGGTTTATTACAACAAAACTAATTTATCACCAAAAAAAAAAAAAAAAAA | |||||||||