| mature miRNA: GGAATGTTGTCTGGCTCGAGG species: Aquilegia formosa x Aquilegia pubescens database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|74547411|gb|DT750807.1|DT750807 EST1184656 Aquilegia cDNA library Aquilegia formosa x Aquilegia pubescens cDNA clone CO1WS77, GGAATGTTGTCTGGCTCGAGG EST sequence (targeted fragment marked with yellow): GCTTGTTGTTCACATCACCAAGAATTTCATGACTTTGCCCAACATCAAGGTTCCTCTCATCCTTGGTATTTGGGGAGGAAAAGGTCAGGGGAAATCTTTCCAATGTGAGCTTGTCTTTGCCAAGATGGGAATCAACCCCATCATGATGAGTGCTGGAGAATTGGAAAGTGGTAATGCTGGGGAACCTGCGAAGTTGATCAGGCAACGTTACCGTGAGGCATCTGATATCATCAAGAAGGGAAAGATGTGTTGTCTGTTCATCAACGATCTTGATGCAGGAGCTGGTAGAATGGGTGGTACAACCCAATATACAGTTAACAACCAGATGGTGAACGCCACCCTCATGAACATTGCTGATAACCCAACCAATGTTCAGCTCCCAGGTATGTACAACAAGGAGGAAAACGCCCGTGTCCCAATCATTGTCACTGGTAACGACTTCTCTACACTCTATGCCCCTCTCATCCGTGATGGTCGTATGGAGAAATTTTACTGGGCTCCTACTCGTGAAGACCGAATTGGTGTTTGCATCGGTATCTTCAAGACTGACAACATTCCTGACGAAGCTGTTGTCAAGATTGTCGATACCTTCCCTGGACAATCAATTGATTTCTTTGGTGCTCTCAGGGCAAGAGTTTATGATGACGAGGTGAGGAAGTGGATAGCTGGTGTTGGTGTTGACGGCGTCGGAAAGAAGCTTGTGAACTCGAGAGACGGACCCCCCACTTTTGAGCAGCCTAAGATGACAGTAGAGAAGCTCCTTGAGTATGGGTTTATGCTTGTGAAAGACAGAGATGTAAAGAGAGTCCAGTTGG | |||||||||
gi|74523525|gb|DT735939.1|DT735939 EST1169788 Aquilegia cDNA library Aquilegia formosa x Aquilegia pubescens cDNA clone CO1U062, GGAATGTTGTCTGGCTCGAGG EST sequence (targeted fragment marked with yellow): CTATATGTTTATATACAATTTCATTTGTTTCTACAACAGATACAAGAATTCAGTGTTTCACAAGCATGACTTCCAACTTTCTTCTCCTAGCCGCATGTTTTAGTTTCTCCAAAGCAACTAGCCCAACTTGTCGAACCCTTTCTCTTGACAAACCGATCCGTCTACTGATGTCTTCCCAAGTAAGGCATTCTTTATCCAGACCATAGTAAAGGCGTACTATATCTTGCTCGCGTTCCGTAAGTGTTGTCTTGATGAGATTGTTAACTTCATCCTTGAGTGTCCATTCATCTACACCATGCCATGGGTTGTTCTCAAGTCGGGTATCTGCAATATAACTATGAAGTGTCTCCCCAGGAAGACCATTTAAAGAGGGGAAGGCTTCCCTGTCCAACGAGATTACCTTAGTTATTGCCTCAGTAGCATTCCTAACTTTCTTTTGAGATATGTTCAGACTTTCGGCAATTCTCTGATGATGCAAGTAGTCCATGTCAGATACAATTCTATAGATGGGGTGATTCCTTTGTTTTCCAACCTTATTTTTGCATTCCGAATTAAGCTCAACCTCTCATGCAAATGTGTAGGCAATCTTAGTGTTCTGGAGTTCTCGACCAGTGCTCTTGAAACTCCCTGACGTATCCACCAATATACATAAGTTGAAATCTTAAAGCCTTTTGAAGAATCAAATTTCTCTATCCCACGAACTAAACCAATCAAACCACCCTGAACAAGGTCAGCCATTTCGGCCCCCATATTGTGATACTTTTGAGCAATAGACATAACTAGTCGAACATTACTCATTGCAAGCCTCTCTTTAGCCAGAGAACATTCTATCAATTTTGATTGTAATTCAGCACGAGATATTTTTAACGAAGTTGCTAGTTGTTCATCAGATGGATTGTATC | |||||||||
gi|71718213|gb|DR948850.1|DR948850 EST1140389 Aquilegia cDNA library Aquilegia formosa x Aquilegia pubescens cDNA clone CO1RD68, GGAATGTTGTCTGGCTCGAGG EST sequence (targeted fragment marked with yellow): GCAATCCTCAGTTCTTATGAATATATCAGCACAGGACTTCGCCAGTACAATTTGGACAACACCATGGATGGATTCTACATAGCACCCGCTTTCATGGACAAGCTTGTTGTTCACATCACCAAGAATTTCATGACTTTGCCCAACATCAAGGTTCCTCTCATCCTTGGTATTTGGGGAGGAAAAGGTCAGGGGAAATCTTTCCAATGTGAGCTTGTCTTTTCCAAGATGGGAATTAACCCCATCATGATGAGTGCTGGAGAATTGGAAAGTGGTAATGCTGGAGAACCTGCGAAGTTGATCAGACAACGTTACCGTGAGGCATCTGATATCATCAAGAAGGGAAAGATGTGTTGTCTGTTCATCAACGATCTTGATGCAGGAGCTGGTAGAATGGGTGGTACAACCCAATATACAGTTAACAACCAGATGGTGAACGCCACCCTCATGAACATTGCTGATAACCCAACCAATGTTCAGCTCCCAGGTATGTACAACAAGGAGGAAAACGCCCGTGTCCCAATCATTGTCACTGGTAACGACTTCTCTACACTCTATGCCCCTCTCATCCGTGATGGTCGTATGGAGAAATTTTACTGGGCTCCTACTCGTGAAGACCGAATTGGTGTTTGCACCGGTATCTTCAAGACTGACAACATTCCTGACGAAGCTGTTGTCAAGATTGTCGATACCTTCCCTGGACAATCAATTGATTTCTTTGGTGCTCTCAGGGCAAGAGTTTATGATGACGAGGTGAGGAAGTGGATAGCTGGGTGTTGGTGTTGACGGCGTCGGAAAGAAGCTTGTGAACTCGAGAGACGGACCCCCCACTTTTGAGCAGCCTAAGATGACAGTAGAGAAGCTCCTTGAGTATGGGTTTATGCTTGTGAAAGAACAAGAGAATGTAAAGAGAGTCCAG | |||||||||
gi|74560302|gb|DT758861.1|DT758861 EST1192710 Aquilegia cDNA library Aquilegia formosa x Aquilegia pubescens cDNA clone CO1Y544, GGAATGTTGTCTGGCTCGAGG EST sequence (targeted fragment marked with yellow): CCAAAGCTTGTGTATATGATAAAATTTATCAACCTTAGGGCTAAATCTTTTGGCAAGACATGTCAGTACAAAGGGCCAAGAGGTCACTGTGCCAATCACATATACAGATCACCCAAAGGTTCTGAAGCTAAAGATATCATCAGCCGCGAGTTAAATCAATATCGAGTTGGACAGCATTCCTCATATCCATAGGCCTTGAAACAGGCCAAGGACTCACAGCAGATGTAGTAAGGGTTTGACTAGGTGGAAAGCTGGTTGGTGTAGCGGATGTATCATCAATTAAATTGTCAGAGTCTGGACCAGATTCAGCATTAGCTCCTTTGTTCTTCATCTTGGAACCACCAAATAAGAAACTCCCCACGACAACCTGGACAGGAGTTGCTGCAATGAGCATCCCTCCAACTCCTCCACCAATGACACGGCCATCAGGACTAGATAACGAAACAGTGAGACCCCCCATTCTACTACGTGAGCCACCATTATCAGTAAGCATGTAGGACCCCGACAAGCATAGTATTTCAAACCGGCCCTCATATGTGACGGTGCCACCAGAAGATGAGGGTTGCCGAAGTGTGACGGTAGAGACAGCACCATTGGCGGATAGAATGCAAACAGCTCTTGGCCCTTGCTGTGAAAATGACATTACTTTTGTTGCAATATCTTCTCCTATTGCTATGGTGATAACGTGTGGCGTGAAACCCATTCCAGCAGAACCAGAGACCAATTCACCAAGGGAAGCCAATTGTTGCTTTCTTCCGGTCCCTGGTGGCCGCCCTCTACCCCGTTTCTGTGTTGGAGTAAGTGATGATGGTGCAGGAGGAGTAGATGACACTGGAGATAATGCCAACGACACTGCTCCATCAGGCCATATTTTCTA | |||||||||